1|SequenceR|10|1|LLHDSPTKAM
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 1 LLHDSPTKA 9
+LH+S TKA
Sbjct: 190 ILHNSNTKA 198
>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P
Query: 1 LLHDSPTKAM 10
LL+ +PTKA+
Sbjct: 269 LLNTAPTKAL 278
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 3 HDSPTKAM 10
HD+PT M
Sbjct: 620 HDNPTLVM 627
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 3 HDSPTKAM 10
HD+PT M
Sbjct: 620 HDNPTLVM 627
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 1 LLHDSPTKA 9
++HD PT +
Sbjct: 594 VMHDGPTSS 602
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 1 LLHDSPTKA 9
+LH S TKA
Sbjct: 190 VLHSSNTKA 198
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 LLHDSPTKA 9
L+H PTK
Sbjct: 510 LVHTDPTKG 518
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 1 LLHDSPTKA 9
L+H PTK
Sbjct: 510 LVHTDPTKG 518
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 1 LLHDSPTKA 9
L+H PTK
Sbjct: 510 LVHTDPTKG 518
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 1 LLHDSPTKA 9
L+H PTK
Sbjct: 510 LVHTDPTKG 518
>sp|TRX1_EBVB9|TRIPLEX capsid protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LLHDSP 6
LL+DSP
Sbjct: 157 LLYDSP 162
2|SequenceR|15|6|EELTSLLHDS
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 EELTSL 6
EELTSL
Sbjct: 73 EELTSL 78
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 EELTSL 6
EELTSL
Sbjct: 73 EELTSL 78
>sp|IR01_HCMVM|PROTEIN RL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 ELTSLLHD 9
+LT+LLH+
Sbjct: 94 QLTNLLHN 101
>sp|E434_ADE12|EARLY E4 34 kDa protein|Human adenovirus A serotype 12
Query: 2 ELTSLLH 8
E+T LLH
Sbjct: 99 EVTQLLH 105
3|SequenceR|20|11|DYPVLEELTS
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 2 YPVLEEL 8
YPVLEE+
Sbjct: 199 YPVLEEM 205
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 YPVLEEL 8
YPVLEE+
Sbjct: 199 YPVLEEM 205
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 2 YPVLEEL 8
YPVLEE+
Sbjct: 199 YPVLEEM 205
>sp|DUT_CWPXG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Cowpox virus (strain GRI-90 /
Query: 2 YPVLEELTS 10
YP LEE+ S
Sbjct: 122 YPELEEVQS 130
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 1 DYPVLEELT 9
D PV+ ELT
Sbjct: 1098 DAPVISELT 1106
>sp|DUT_VACCP|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain L-IVP)
Query: 2 YPVLEELTS 10
YP LEE+ S
Sbjct: 122 YPELEEVQS 130
>sp|DUT_VACCC|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain
Query: 2 YPVLEELTS 10
YP LEE+ S
Sbjct: 122 YPELEEVQS 130
>sp|DUT_VACCA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain Ankara)
Query: 2 YPVLEELTS 10
YP LEE+ S
Sbjct: 122 YPELEEVQS 130
>sp|DUT_MONPV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Monkeypox virus (MPXV)
Query: 2 YPVLEELTS 10
YP LEE+ S
Sbjct: 126 YPELEEVQS 134
>sp|PG107_VAR67|LATE protein H2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 DYPVLEELT 9
D PV ELT
Sbjct: 52 DNPVFNELT 60
>sp|PG107_VACCC|PROTEIN H2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DYPVLEELT 9
D PV ELT
Sbjct: 52 DNPVFNELT 60
>sp|PG107_MONPV|MPXVGP092 virus (MPXV)
Query: 1 DYPVLEELT 9
D PV ELT
Sbjct: 52 DNPVFNELT 60
>sp|H2_VARV|LATE protein H2|Variola virus
Query: 1 DYPVLEELT 9
D PV ELT
Sbjct: 52 DNPVFNELT 60
>sp|H2_VACCA|LATE protein H2|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DYPVLEELT 9
D PV ELT
Sbjct: 52 DNPVFNELT 60
>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)
Query: 1 DYPVLEELT 9
D PVL++LT
Sbjct: 46 DLPVLDQLT 54
>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)
Query: 1 DYPVLEELT 9
D PVL++LT
Sbjct: 46 DLPVLDQLT 54
>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)
Query: 1 DYPVLEELT 9
D PVL++LT
Sbjct: 46 DLPVLDQLT 54
>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)
Query: 1 DYPVLEELT 9
D PVL++LT
Sbjct: 46 DLPVLDQLT 54
>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)
Query: 1 DYPVLEELT 9
D PVL++LT
Sbjct: 46 DLPVLDQLT 54
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 DYPVLEEL 8
D P LEE+
Sbjct: 2428 DIPTLEEV 2435
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 1 DYPVLEELT 9
D P +E+LT
Sbjct: 116 DVPKIEQLT 124
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 2 YPVLEELT 9
YP L ELT
Sbjct: 502 YPSLLELT 509
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 2 YPVLEELT 9
YP L ELT
Sbjct: 502 YPSLLELT 509
4|SequenceR|25|16|KFKEFDYPVL
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 3 KEFDYPVL 10
K FD PVL
Sbjct: 77 KRFDNPVL 84
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 3 KEFDYPV 9
KE+D PV
Sbjct: 180 KEYDIPV 186
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 3 KEFDYPV 9
KE+D PV
Sbjct: 180 KEYDIPV 186
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 KFKEFDY 7
+FKE DY
Sbjct: 2054 EFKELDY 2060
>sp|SLFN_VACCC|SCHLAFEN-LIKE protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KFKEFDYP 8
+ +EF+YP
Sbjct: 81 EMQEFEYP 88
>sp|LANA1_HHV8P|PROTEIN LANA1|Human herpesvirus 8 type P
Query: 4 EFDYPVL 10
E DYPV+
Sbjct: 916 EVDYPVV 922
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 5 FDYPVL 10
F YPVL
Sbjct: 197 FTYPVL 202
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 5 FDYPVL 10
F YPVL
Sbjct: 197 FTYPVL 202
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 KFKEFDYPV 9
K +E D+P+
Sbjct: 1477 KARELDFPL 1485
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 FDYPVL 10
F YPVL
Sbjct: 197 FTYPVL 202
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 KFKEFDYPV 9
K +E D+P+
Sbjct: 1477 KSRELDFPL 1485
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 1 KFKEFDYP 8
+ EF+YP
Sbjct: 319 ELPEFEYP 326
>sp|VE6_HPV38|PROTEIN E6|Human papillomavirus 38
Query: 1 KFKEFDY 7
+ +EFDY
Sbjct: 38 ELREFDY 44
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FKEFDYPV 9
FK+ YPV
Sbjct: 195 FKDPQYPV 202
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FKEFDYPV 9
FK+ YPV
Sbjct: 195 FKDPQYPV 202
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FKEFDYPV 9
FK+ YPV
Sbjct: 195 FKDPQYPV 202
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FKEFDYPV 9
FK+ YPV
Sbjct: 195 FKDPQYPV 202
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FKEFDYPV 9
FK+ YPV
Sbjct: 195 FKDPQYPV 202
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FKEFDYPV 9
FK+ YPV
Sbjct: 195 FKDPQYPV 202
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FKEFDYPV 9
FK+ YPV
Sbjct: 195 FKDPQYPV 202
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FKEFDYPV 9
FK+ YPV
Sbjct: 195 FKDPQYPV 202
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FKEFDYPV 9
FK+ YPV
Sbjct: 174 FKDPQYPV 181
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FKEFDYPV 9
FK+ YPV
Sbjct: 195 FKDPQYPV 202
5|SequenceR|30|21|NQLKFKFKEF
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 KFKFKEF 10
KF+ KEF
Sbjct: 614 KFRVKEF 620
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 NQLKFKF 7
N L+FKF
Sbjct: 421 NSLQFKF 427
>sp|PG192_VACCC|PROTEIN OPG192|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NQLKFKFKEF 10
N+L FKE+
Sbjct: 50 NELVLNFKEY 59
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 NQLKFKFKE 9
N+LK FKE
Sbjct: 488 NELKLWFKE 496
>sp|PG192_MONPV|PROTEIN OPG192|Monkeypox virus (MPXV)
Query: 1 NQLKFKFKEF 10
N+L FKE+
Sbjct: 50 NELVLNFKEY 59
6|SequenceR|35|26|KQVSTNQLKF
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 3 VSTNQL 8
VSTNQL
Sbjct: 289 VSTNQL 294
>sp|VSSGP_EBOZM|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Mayinga-76)
Query: 1 KQVSTNQLK 9
K STNQL+
Sbjct: 56 KLSSTNQLR 64
>sp|VSSGP_EBOZ5|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Kikwit-95)
Query: 1 KQVSTNQLK 9
K STNQL+
Sbjct: 56 KLSSTNQLR 64
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 KQVSTNQLK 9
K STNQL+
Sbjct: 56 KLSSTNQLR 64
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 KQVSTNQLK 9
K STNQL+
Sbjct: 56 KLSSTNQLR 64
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 KQVSTNQLK 9
K STNQL+
Sbjct: 56 KLSSTNQLR 64
7|SequenceR|40|31|IRSHEKQVST
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 1 IRSHEKQV 8
IRSH+KQ+
Sbjct: 1134 IRSHKKQL 1141
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 IRSHEKQVS 9
+RS KQVS
Sbjct: 946 LRSKTKQVS 954
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 IRSHEKQVS 9
+RS KQVS
Sbjct: 944 LRSKTKQVS 952
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 IRSHEKQVS 9
+RS KQ+S
Sbjct: 946 LRSRTKQIS 954
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 IRSHEKQVS 9
+RS KQ+S
Sbjct: 946 LRSRTKQIS 954
8|SequenceR|45|36|IQSRPIRSHE
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 IQSRPIRSHE 10
++ RP+++HE
Sbjct: 1111 MEIRPMKTHE 1120
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 IQSRPIRSHE 10
++ RP+++HE
Sbjct: 1111 MEIRPMKTHE 1120
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 IQSRPIRSHE 10
++ RP+++HE
Sbjct: 1111 MEIRPMKTHE 1120
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 5 PIRSHE 10
PIRSH+
Sbjct: 1133 PIRSHK 1138
>sp|PHOSP_PI4HB|PHOSPHOPROTEIN parainfluenza 4b virus (strain
Query: 3 SRPIRSH 9
S P+RSH
Sbjct: 69 SSPLRSH 75
>sp|DUT_EBVG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 3 SRPIRSH 9
SRP+ SH
Sbjct: 65 SRPVTSH 71
>sp|DUT_EBVB9|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 3 SRPIRSH 9
SRP+ SH
Sbjct: 65 SRPVTSH 71
>sp|DUT_EBVA8|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 3 SRPIRSH 9
SRP+ SH
Sbjct: 65 SRPVTSH 71
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 5 PIRSH 9
PIRSH
Sbjct: 672 PIRSH 676
>sp|V_PI4HB|NON-STRUCTURAL protein V|Human parainfluenza 4b virus (strain
Query: 3 SRPIRSH 9
S P+RSH
Sbjct: 69 SSPLRSH 75
9|SequenceR|50|41|PRARQIQSRP
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 1 PRARQIQSRP 10
PR Q+Q RP
Sbjct: 233 PRTTQVQERP 242
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PRARQIQSRP 10
PRA I +RP
Sbjct: 2282 PRAMPIWARP 2291
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 1 PRARQIQSRP 10
P+A +I RP
Sbjct: 38 PKATRISERP 47
10|SequenceR|55|46|TAMKVPRARQ
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 TAMKVPRARQ 10
T +VP+AR
Sbjct: 588 TTCRVPKARN 597
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 TAMKVPRARQ 10
T +VP+AR
Sbjct: 588 TTCRVPKARN 597
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 TAMKVPRARQ 10
T +VP+AR
Sbjct: 588 TTCRVPKARN 597
11|SequenceR|60|51|YTVLLTAMKV
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 YTVLL---TAMKV 10
YTVLL TA+KV
Sbjct: 1679 YTVLLTTPTALKV 1691
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 YTVLL---TAMKV 10
YTVLL TA+KV
Sbjct: 1679 YTVLLTTPTALKV 1691
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 YTVLL---TAMKV 10
YTVLL TA+KV
Sbjct: 1679 YTVLLTTPTALKV 1691
12|SequenceR|65|56|YEEGYYTVLL
>sp|MATRX_MEASY|MATRIX protein|Measles virus (strain Yamagata-1) (MeV)
Query: 2 EEGYYTV 8
+ GYYTV
Sbjct: 117 DNGYYTV 123
>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)
Query: 2 EEGYYTV 8
+ GYYTV
Sbjct: 167 DNGYYTV 173
>sp|MATRX_MEASI|MATRIX protein|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 EEGYYTV 8
+ GYYTV
Sbjct: 167 DNGYYTV 173
>sp|MATRX_MEASH|MATRIX protein|Measles virus (strain Halle) (MeV)
Query: 2 EEGYYTV 8
+ GYYTV
Sbjct: 167 DNGYYTV 173
>sp|MATRX_MEASE|MATRIX protein|Measles virus (strain Edmonston) (MeV)
Query: 2 EEGYYTV 8
+ GYYTV
Sbjct: 167 DNGYYTV 173
>sp|MATRX_MEASC|MATRIX protein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 EEGYYTV 8
+ GYYTV
Sbjct: 167 DNGYYTV 173
>sp|MATRX_MEASA|MATRIX protein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 EEGYYTV 8
+ GYYTV
Sbjct: 167 DNGYYTV 173
>sp|IL1BP_CWPXB|INTERLEUKIN-1-BINDING protein|Cowpox virus (strain Brighton Red)
Query: 2 EEGYYTVLL 10
+ GYYT +L
Sbjct: 188 DAGYYTCVL 196
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 1 YEEGYYTVL 9
+EE +YT L
Sbjct: 568 WEEAFYTPL 576
Query: 1 YEEGYY 6
+EEGY+
Sbjct: 76 FEEGYH 81
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 1 YEEGYYTVL 9
+EE +YT L
Sbjct: 568 WEEAFYTPL 576
Query: 1 YEEGYY 6
+EEGY+
Sbjct: 76 FEEGYH 81
>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)
Query: 2 EEGYYTVLL 10
+ GYYT +L
Sbjct: 188 DAGYYTCVL 196
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 3 EGYYTVL 9
EGYY +L
Sbjct: 304 EGYYDLL 310
>sp|VP22_HHV11|TEGUMENT protein VP22|Human herpesvirus 1 (strain 17)
Query: 1 YEEGYYT 7
YE+ YYT
Sbjct: 19 YEDLYYT 25
>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 YEEGYYT 7
Y EG++T
Sbjct: 92 YSEGFWT 98
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 1 YEEGYYTV 8
Y GYY V
Sbjct: 304 YTNGYYVV 311
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 YEEGYYTV 8
YE G +TV
Sbjct: 193 YENGRFTV 200
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 YEEGYYTV 8
YE G +TV
Sbjct: 209 YENGRFTV 216
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 2 EEGYYTVL 9
EE Y TVL
Sbjct: 163 EESYRTVL 170
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 2 EEGYYTVL 9
EE Y TVL
Sbjct: 163 EESYRTVL 170
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 YEEGYYTV 8
YE G +TV
Sbjct: 209 YENGRFTV 216
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 YEEGYYTV 8
YE G +TV
Sbjct: 209 YENGRFTV 216
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 YEEGYYTV 8
YE G +TV
Sbjct: 209 YENGRFTV 216
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 YEEGYYTVL 9
YE +Y VL
Sbjct: 2262 YEHRFYAVL 2270
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 YEEGYYTV 8
YE G +TV
Sbjct: 208 YENGRFTV 215
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 YEEGYYTV 8
YE G +TV
Sbjct: 208 YENGRFTV 215
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 1 YEEGYYTVLL 10
+ +G+YT+L
Sbjct: 527 FLKGHYTILF 536
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 YEEGYYTVLL 10
+ +G+YT+L
Sbjct: 527 FLKGHYTILF 536
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YEEGYYTVLL 10
+ +G+YT+L
Sbjct: 527 FLKGHYTILF 536
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 1 YEEGYYTVLL 10
+ +G+YT+L
Sbjct: 527 FLKGHYTILF 536
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 1 YEEGYYTVLL 10
Y++GY + L
Sbjct: 114 YQQGYRAIFL 123
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 1 YEEGYYTVLL 10
Y++GY + L
Sbjct: 114 YQQGYRAIFL 123
>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)
Query: 2 EEGYYTVL 9
EE Y TVL
Sbjct: 165 EESYRTVL 172
>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)
Query: 2 EEGYYTVL 9
EE Y TVL
Sbjct: 165 EESYRTVL 172
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 EEGYY 6
+EGYY
Sbjct: 926 QEGYY 930
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 EEGYY 6
+EGYY
Sbjct: 925 QEGYY 929
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 YEEGY 5
Y+EGY
Sbjct: 1035 YDEGY 1039
>sp|NSP2_ROTHC|NON-STRUCTURAL protein 2|Rotavirus C (isolate RVC/Human/United
Query: 1 YEEGYYTV 8
Y++ Y+T+
Sbjct: 159 YQDSYFTI 166
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 YEEGYYTVL 9
Y E YTVL
Sbjct: 1755 YPEYIYTVL 1763
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 YEEGYYTVL 9
Y E YTVL
Sbjct: 1754 YPEYIYTVL 1762
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 YEEGYYTVL 9
Y E YTVL
Sbjct: 1754 YPEYIYTVL 1762
>sp|MATRX_VSIVG|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 1 YEEGYYTV 8
YE+ ++TV
Sbjct: 61 YEKSFFTV 68
13|SequenceR|70|61|TLQVAYEEGY
>sp|PG187_MONPV|B1 kinase|Monkeypox virus (MPXV)
Query: 1 TLQVAYEEGY 10
T+Q +E+GY
Sbjct: 134 TIQFMHEQGY 143
>sp|PG187_VACCA|B1 kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 TLQVAYEEGY 10
T+Q +E+GY
Sbjct: 134 TIQFMHEQGY 143
>sp|PG187_VACCC|B1 kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TLQVAYEEGY 10
T+Q +E+GY
Sbjct: 134 TIQFMHEQGY 143
>sp|PG187_VAR67|B1 kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 TLQVAYEEGY 10
T+Q +E+GY
Sbjct: 134 TIQFMHEQGY 143
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 LQVAYEEGY 10
+QV YE+ Y
Sbjct: 169 IQVVYEKTY 177
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 2 LQVAYEEGY 10
+QV YE+ Y
Sbjct: 173 IQVVYEKTY 181
>sp|VL2_HPV10|MINOR capsid protein L2|Human papillomavirus type 10
Query: 4 VAYEEGY 10
VA+ EGY
Sbjct: 362 VAFTEGY 368
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 2 LQVAYEEGY 10
+QV YE Y
Sbjct: 164 IQVVYERTY 172
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 2 LQVAYEEGY 10
+QV YE Y
Sbjct: 164 IQVVYERTY 172
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 2 LQVAYEEGY 10
+QV YE Y
Sbjct: 164 IQVVYERTY 172
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 2 LQVAYEEGY 10
+QV YE+ Y
Sbjct: 170 IQVIYEKTY 178
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 2 LQVAYEEGY 10
+Q AY+ GY
Sbjct: 330 VQWAYDNGY 338
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 LQVAYEEGY 10
+QV YE+ Y
Sbjct: 170 IQVIYEKTY 178
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 2 LQVAYEEGY 10
+QV YE+ Y
Sbjct: 174 IQVNYEKTY 182
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 2 LQVAYEEGY 10
+QV YE+ Y
Sbjct: 174 IQVNYEKTY 182
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 LQVAYEEGY 10
+QV YE+ Y
Sbjct: 174 IQVNYEKTY 182
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 1 TLQVAYEEG 9
TLQV +EG
Sbjct: 277 TLQVKRKEG 285
>sp|VE6_HPV53|PROTEIN E6|Human papillomavirus type 53
Query: 2 LQVAYEEGY 10
L+V Y +GY
Sbjct: 54 LRVVYRDGY 62
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 TLQVAYEEG 9
TLQ Y++G
Sbjct: 1594 TLQGLYQQG 1602
14|SequenceR|75|66|RLVQLTLQVA
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 1 RLVQLTLQ 8
+ +QLTLQ
Sbjct: 208 KFIQLTLQ 215
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 RLVQLTL 7
RLV+LTL
Sbjct: 1199 RLVRLTL 1205
15|SequenceR|80|71|RQNIARLVQL
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RQNIARLV 8
RQN+AR++
Sbjct: 468 RQNLARII 475
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RQNIARLV 8
RQN+AR++
Sbjct: 468 RQNLARII 475
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RQNIARLVQ 9
R+N AR++Q
Sbjct: 485 RENPARILQ 493
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 NIARLVQ 9
N+ARLV+
Sbjct: 1323 NVARLVK 1329
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 NIARLVQ 9
N+ARLV+
Sbjct: 1343 NVARLVK 1349
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 NIARLVQ 9
N+ARLV+
Sbjct: 1373 NVARLVK 1379
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 NIARLVQ 9
N+ARLV+
Sbjct: 1323 NVARLVK 1329
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 NIARLVQ 9
N+ARLV+
Sbjct: 1343 NVARLVK 1349
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 NIARLVQ 9
N+ARLV+
Sbjct: 1373 NVARLVK 1379
>sp|UNG_HHV7J|URACIL-DNA glycosylase|Human herpesvirus 7 (strain JI)
Query: 2 QNIARLVQ 9
QN+ +LVQ
Sbjct: 49 QNVYKLVQ 56
16|SequenceR|85|76|EEALLRQNIA
>sp|VME1_CVHOC|MEMBRANE protein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 EEALLRQNI 9
+ ALLR NI
Sbjct: 222 DTALLRNNI 230
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 ALLRQNI 9
ALLR+N+
Sbjct: 1679 ALLRENV 1685
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 ALLRQNI 9
ALLR+N+
Sbjct: 1679 ALLRENV 1685
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 ALLRQNI 9
ALLR+N+
Sbjct: 1679 ALLRENV 1685
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 ALLRQNI 9
ALLR+N+
Sbjct: 1679 ALLRENV 1685
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 ALLRQNI 9
ALLR+N+
Sbjct: 1679 ALLRENV 1685
>sp|UL88_HHV7J|PROTEIN U59|Human herpesvirus 7 (strain JI)
Query: 4 LLRQNIA 10
LLR+N+A
Sbjct: 108 LLRENLA 114
17|SequenceR|90|81|AARHLEEALL
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 AARHLEE 7
+ARH+EE
Sbjct: 270 SARHIEE 276
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 1 AARHLEE 7
+ARH+EE
Sbjct: 271 SARHIEE 277
>sp|VE6_HPV35|PROTEIN E6|Human papillomavirus 35
Query: 3 RHLEE 7
RHLEE
Sbjct: 117 RHLEE 121
>sp|VE6_HPV21|PROTEIN E6|Human papillomavirus 21
Query: 3 RHLEE 7
RHLEE
Sbjct: 18 RHLEE 22
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 1 AARHLEE 7
+A+H+EE
Sbjct: 271 SAKHIEE 277
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 1 AARHLEE 7
+A+H+EE
Sbjct: 269 SAKHIEE 275
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 1 AARHLEE 7
+A+H+EE
Sbjct: 269 SAKHIEE 275
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 ARHLEEA 8
A HLE+A
Sbjct: 1348 ANHLEQA 1354
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 ARHLEEA 8
A HLE+A
Sbjct: 1348 ANHLEQA 1354
>sp|NEC2_HHV7J|NUCLEAR egress protein 2|Human herpesvirus 7 (strain JI)
Query: 1 AARHLEEAL 9
AARH+++ L
Sbjct: 180 AARHIKKPL 188
18|SequenceR|95|86|SYEQIAARHL
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 YEQIAARHL 10
Y+Q+AARH
Sbjct: 425 YDQLAARHF 433
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 YEQIAARHL 10
Y+Q+AARH
Sbjct: 425 YDQLAARHF 433
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 SYEQIAARH 9
S+EQI A+H
Sbjct: 436 SHEQITAKH 444
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 3 EQIAARHL 10
EQ+ ARHL
Sbjct: 252 EQLYARHL 259
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 SYEQIAARH 9
+Y+Q+A RH
Sbjct: 1097 AYDQLARRH 1105
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 3 EQIAARH 9
EQI ARH
Sbjct: 252 EQIFARH 258
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 3 EQIAARH 9
EQI ARH
Sbjct: 252 EQIFARH 258
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 3 EQIAARHL 10
EQ+ ARH
Sbjct: 254 EQLYARHF 261
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 3 EQIAARHL 10
EQ+ ARH
Sbjct: 254 EQLYARHF 261
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 3 EQIAARHL 10
EQ+ ARH
Sbjct: 253 EQLFARHF 260
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 3 EQIAARHL 10
EQ+ ARH
Sbjct: 251 EQLFARHF 258
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 3 EQIAARHL 10
EQ+ ARH
Sbjct: 253 EQLFARHF 260
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 3 EQIAARHL 10
EQ+ ARH
Sbjct: 253 EQLFARHF 260
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 3 EQIAARHL 10
EQ+ ARH
Sbjct: 280 EQLFARHF 287
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 3 EQIAARHL 10
EQ+ ARH
Sbjct: 252 EQLFARHF 259
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 3 EQIAARHL 10
EQ+ ARH
Sbjct: 253 EQLFARHF 260
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 3 EQIAARHL 10
EQ+ ARH
Sbjct: 252 EQLFARHF 259
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 3 EQIAARHL 10
EQ+ ARH
Sbjct: 252 EQLFARHF 259
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 3 EQIAARHL 10
EQ+ ARH
Sbjct: 314 EQLFARHF 321
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 3 EQIAARHL 10
EQ+ ARH
Sbjct: 280 EQLFARHF 287
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 3 EQIAARHL 10
EQ+ ARH
Sbjct: 280 EQLFARHF 287
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 3 EQIAARH 9
EQ+ ARH
Sbjct: 252 EQLFARH 258
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 3 EQIAARH 9
EQ+ ARH
Sbjct: 287 EQLFARH 293
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 3 EQIAARH 9
EQ+ ARH
Sbjct: 260 EQLFARH 266
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 SYEQIAARH 9
+YE+++AR+
Sbjct: 1782 AYERLSARY 1790
19|SequenceR|100|91|GNEQTSYEQI
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 1 GNEQTSYEQI 10
GN + YE+I
Sbjct: 831 GNPNSRYERI 840
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 GNEQTSYEQI 10
G E T Y Q+
Sbjct: 624 GQEITQYSQL 633
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 GNEQTSYEQI 10
G E T Y Q+
Sbjct: 624 GQEITQYSQL 633
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 GNEQTS 6
GNE+TS
Sbjct: 720 GNEETS 725
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 GNEQTS 6
GNE+TS
Sbjct: 720 GNEETS 725
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 GNEQTS 6
GNE+TS
Sbjct: 718 GNEETS 723
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 GNEQTS 6
GNE+TS
Sbjct: 720 GNEETS 725
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 GNEQTS 6
GNE+TS
Sbjct: 720 GNEETS 725
20|SequenceR|105|96|ASDDTGNEQT
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 3 DDTGNEQT 10
DD NEQT
Sbjct: 800 DDPPNEQT 807
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 5 TGNEQT 10
TGN+QT
Sbjct: 935 TGNKQT 940
>sp|VPU_HV1VI|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 2 SDDTGNE 8
++D+GNE
Sbjct: 50 AEDSGNE 56
>sp|VPU_HV1MN|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 2 SDDTGNE 8
++D+GNE
Sbjct: 50 AEDSGNE 56
>sp|VPU_HV1JR|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 2 SDDTGNE 8
++D+GNE
Sbjct: 50 AEDSGNE 56
>sp|VPU_HV1EL|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 2 SDDTGNE 8
++D+GNE
Sbjct: 50 AEDSGNE 56
>sp|VPU_HV193|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 2 SDDTGNE 8
++D+GNE
Sbjct: 50 AEDSGNE 56
>sp|VPU_HV190|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 2 SDDTGNE 8
++D+GNE
Sbjct: 49 AEDSGNE 55
>sp|VPU_HV1MA|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 2 SDDTGNE 8
++D+GNE
Sbjct: 50 AEDSGNE 56
>sp|MATRX_VSNJO|MATRIX protein|Vesicular stomatitis New Jersey virus
Query: 2 SDDTGNEQ 9
SDD NE+
Sbjct: 178 SDDESNEK 185
>sp|VPU_HV1ET|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 2 SDDTGNE 8
++D+GNE
Sbjct: 55 AEDSGNE 61
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 2 SDDTGNEQ 9
+DDTG E+
Sbjct: 2 ADDTGTEE 9
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 2 SDDTGNEQ 9
+DDTG E+
Sbjct: 2 ADDTGTEE 9
>sp|LMP1_EBVB9|LATENT membrane protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ASDDTGNE 8
A+DD+G+E
Sbjct: 207 ATDDSGHE 214
>sp|VPU_HV1B8|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 2 SDDTGNE 8
++D+GNE
Sbjct: 50 AEDSGNE 56
21|SequenceR|110|101|LSSSAASDDT
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 SSSAASDD 9
+SSAA DD
Sbjct: 472 ASSAAMDD 479
22|SequenceR|115|106|PKNEGLSSSA
>sp|PG055_VARV|PROTEIN OPG055|Variola virus
Query: 2 KNEGLS 7
KNEG+S
Sbjct: 151 KNEGVS 156
>sp|PG055_VAR67|PROTEIN OPG055|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 KNEGLS 7
KNEG+S
Sbjct: 151 KNEGVS 156
23|SequenceR|120|111|TKLSRPKNEG
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 1 TKLSRPKNEG 10
TKL R NEG
Sbjct: 1035 TKLIRQANEG 1044
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 TKLSRPKNEG 10
TKL R NEG
Sbjct: 1035 TKLIRQANEG 1044
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 4 SRPKNEG 10
SRP++EG
Sbjct: 137 SRPEDEG 143
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 TKLSRPKNEG 10
TKL R NEG
Sbjct: 1027 TKLIRQANEG 1036
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 TKLSRPKNEG 10
TKL R NEG
Sbjct: 1035 TKLIRQANEG 1044
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TKLSRPKNEG 10
TKL R NEG
Sbjct: 1035 TKLIRQANEG 1044
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 1 TKLSRPKNEG 10
TKL R NEG
Sbjct: 1035 TKLIRQANEG 1044
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 1 TKLSRPKNEG 10
TKL R NEG
Sbjct: 1035 TKLIRQANEG 1044
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 1 TKLSRPKNEG 10
TKL R NEG
Sbjct: 1035 TKLIRQANEG 1044
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 1 TKLSRPKNEG 10
TKL R NEG
Sbjct: 1035 TKLIRQANEG 1044
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TKLSRP 6
TK+SRP
Sbjct: 506 TKMSRP 511
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 4 SRPKNEG 10
SRP +EG
Sbjct: 137 SRPDDEG 143
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 4 SRPKNEG 10
SRP +EG
Sbjct: 139 SRPDDEG 145
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 KLSRPKNEG 10
K++RP EG
Sbjct: 3101 KVTRPGKEG 3109
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 4 SRPKNEG 10
SRP +EG
Sbjct: 713 SRPTSEG 719
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 4 SRPKNEG 10
SRP +EG
Sbjct: 139 SRPDDEG 145
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 4 SRPKNEG 10
SRP +EG
Sbjct: 713 SRPTSEG 719
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 4 SRPKNEG 10
SRP +EG
Sbjct: 713 SRPTSEG 719
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 4 SRPKNEG 10
SRP +EG
Sbjct: 708 SRPTSEG 714
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 KLSRPKNEG 10
+++RP EG
Sbjct: 3091 RVARPSREG 3099
24|SequenceR|125|116|EPHDPTKLSR
>sp|FUS_PI1HC|FUSION glycoprotein F0|Human parainfluenza 1 virus (strain
Query: 2 PHDPTKL 8
P DPT+L
Sbjct: 344 PRDPTQL 350
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PHDPTKLSR 10
P DPTK SR
Sbjct: 606 PDDPTKQSR 614
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 2 PHDPTKLS 9
P DP KL+
Sbjct: 814 PEDPVKLA 821
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 PHDPTKLS 9
P DP KL+
Sbjct: 814 PEDPVKLA 821
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 PHDPTKLS 9
P DP KL+
Sbjct: 814 PEDPVKLA 821
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 PHDPTKLS 9
P DP KL+
Sbjct: 814 PEDPVKLA 821
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 PHDPTKLS 9
P DP KL+
Sbjct: 814 PEDPVKLA 821
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 PHDPTKLS 9
P DP KL+
Sbjct: 814 PEDPVKLA 821
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 PHDPTKLS 9
P DP KL+
Sbjct: 814 PEDPVKLA 821
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 PHDPTKLS 9
P DP KL+
Sbjct: 814 PEDPVKLA 821
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 PHDPTKLS 9
P DP KL+
Sbjct: 814 PEDPVKLA 821
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 PHDPTKLS 9
P DP KL+
Sbjct: 814 PEDPVKLA 821
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 HDPTKLS 9
H+PTKL+
Sbjct: 826 HNPTKLT 832
Query: 2 PHDPTKLS 9
PH PT+++
Sbjct: 1651 PHIPTQIT 1658
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 HDPTKLS 9
H+PTKL+
Sbjct: 826 HNPTKLT 832
Query: 2 PHDPTKLS 9
PH PT+++
Sbjct: 1651 PHIPTQIT 1658
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PTKLSR 10
PTK+SR
Sbjct: 505 PTKMSR 510
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 PHDP 5
PHDP
Sbjct: 2145 PHDP 2148
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 3 HDPTKLSR 10
HDPT L +
Sbjct: 157 HDPTPLCQ 164
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 2 PHDP 5
PHDP
Sbjct: 117 PHDP 120
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 1 EPHDPTKLS 9
E H P K+S
Sbjct: 1009 EKHSPIKIS 1017
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 1 EPHDPTKLS 9
E H P K+S
Sbjct: 1009 EKHSPIKIS 1017
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PHDPT 6
PHDP+
Sbjct: 445 PHDPS 449
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 PHDPTKL 8
P DPT+L
Sbjct: 720 PSDPTQL 726
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 PHDPTKL 8
P DPT+L
Sbjct: 720 PSDPTQL 726
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 PHDPTKL 8
P DPT+L
Sbjct: 720 PSDPTQL 726
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PHDPT 6
PHDP+
Sbjct: 445 PHDPS 449
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 PHDPTKLS 9
PH PT+++
Sbjct: 1650 PHIPTQIT 1657
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 EPHDPTKLSR 10
+ HDP K R
Sbjct: 300 QTHDPVKQLR 309
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 PHDPTKLS 9
PH PT+++
Sbjct: 1658 PHIPTQIT 1665
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 PHDPTKLS 9
PH PT+++
Sbjct: 1653 PHIPTQIT 1660
Query: 3 HDPTKLS 9
H+PTK++
Sbjct: 827 HNPTKVT 833
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 PHDPTKLS 9
PH PT+++
Sbjct: 1653 PHIPTQIT 1660
Query: 3 HDPTKLS 9
H+PTK++
Sbjct: 827 HNPTKVT 833
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 3 HDPTKL 8
HDPT L
Sbjct: 290 HDPTTL 295
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 EPHDPT 6
+ HDPT
Sbjct: 867 DKHDPT 872
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 HDPTKLS 9
H+PTK++
Sbjct: 825 HNPTKVT 831
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 HDPTKLS 9
H+PTK++
Sbjct: 825 HNPTKVT 831
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 EPHDPTKL 8
EP DP L
Sbjct: 64 EPEDPNAL 71
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PHDPTKLSR 10
P DP K SR
Sbjct: 606 PDDPMKQSR 614
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 EPHDPTKL 8
EP DP L
Sbjct: 64 EPEDPNAL 71
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 EPHDPTKL 8
EP DP L
Sbjct: 64 EPEDPNAL 71
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 1 EPHDPTKL 8
EP DP L
Sbjct: 64 EPEDPNAL 71
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 1 EPHDPTKL 8
EP DP L
Sbjct: 64 EPEDPNAL 71
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 1 EPHDPTKL 8
EP DP L
Sbjct: 64 EPEDPNAL 71
>sp|PAX_I07A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 EPHDPTKL 8
EP DP L
Sbjct: 64 EPEDPNAL 71
>sp|PAX_I00A1|PROTEIN PA-X|Influenza A virus (strain A/New
Query: 1 EPHDPTKL 8
EP DP L
Sbjct: 64 EPEDPNAL 71
>sp|PAX_I96A2|PROTEIN PA-X|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 EPHDPTKL 8
EP DP L
Sbjct: 64 EPEDPNAL 71
>sp|PAX_I83A1|PROTEIN PA-X|Influenza A virus (strain A/Chile/1/1983
Query: 1 EPHDPTKL 8
EP DP L
Sbjct: 64 EPEDPNAL 71
>sp|PAX_I80AA|PROTEIN PA-X|Influenza A virus (strain A/India/6263/1980
Query: 1 EPHDPTKL 8
EP DP L
Sbjct: 64 EPEDPNAL 71
>sp|PAX_I96A3|PROTEIN PA-X|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 EPHDPTKL 8
EP DP L
Sbjct: 64 EPEDPNAL 71
>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 PHDPTKL 8
PH P K+
Sbjct: 291 PHPPLKM 297
>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PHDPTKL 8
PH P K+
Sbjct: 291 PHPPLKM 297
25|SequenceR|130|121|NGENGEPHDP
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 3 ENGEPHDP 10
ENGEP +P
Sbjct: 641 ENGEPSEP 648
>sp|E3_YLDV|PROTEIN E3 homolog|Yaba-like disease virus (YLDV)
Query: 1 NGENGEPHD 9
N +NGE HD
Sbjct: 74 NCDNGEKHD 82
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 NGEPH 8
NGEPH
Sbjct: 21 NGEPH 25
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 NGEPH 8
NGEPH
Sbjct: 121 NGEPH 125
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 NGEPH 8
NGEPH
Sbjct: 121 NGEPH 125
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 NGEPH 8
NGEPH
Sbjct: 121 NGEPH 125
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 NGEPH 8
NGEPH
Sbjct: 121 NGEPH 125
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 NGEPH 8
NGEPH
Sbjct: 121 NGEPH 125
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 NGEPH 8
NGEPH
Sbjct: 121 NGEPH 125
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 NGEPH 8
NGEPH
Sbjct: 121 NGEPH 125
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 NGEPH 8
NGEPH
Sbjct: 121 NGEPH 125
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 3 ENGEPH 8
ENG+PH
Sbjct: 304 ENGKPH 309
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 3 ENGEPH 8
ENG+PH
Sbjct: 304 ENGKPH 309
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 5 GEPHDP 10
GE HDP
Sbjct: 283 GEDHDP 288
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 5 GEPHDP 10
GE HDP
Sbjct: 283 GEDHDP 288
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 3 ENGEPHDP 10
E+G P DP
Sbjct: 185 EDGAPKDP 192
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 NGEPHDP 10
NG P DP
Sbjct: 681 NGGPDDP 687
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 NGEPHDP 10
NG P DP
Sbjct: 681 NGGPDDP 687
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2393 GEPGDP 2398
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2404 GEPGDP 2409
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2393 GEPGDP 2398
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2393 GEPGDP 2398
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2397 GEPGDP 2402
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2397 GEPGDP 2402
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2393 GEPGDP 2398
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2393 GEPGDP 2398
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2393 GEPGDP 2398
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2393 GEPGDP 2398
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2404 GEPGDP 2409
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2393 GEPGDP 2398
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2393 GEPGDP 2398
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2393 GEPGDP 2398
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2397 GEPGDP 2402
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2393 GEPGDP 2398
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2401 GEPGDP 2406
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2393 GEPGDP 2398
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2397 GEPGDP 2402
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2404 GEPGDP 2409
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2399 GEPGDP 2404
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2397 GEPGDP 2402
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 4 NGEPHD 9
NGEP D
Sbjct: 149 NGEPED 154
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 1 NGENGEPH 8
N EN +PH
Sbjct: 174 NAENVDPH 181
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2404 GEPGDP 2409
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2402 GEPGDP 2407
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2403 GEPGDP 2408
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 5 GEPHDP 10
GEPH P
Sbjct: 3073 GEPHSP 3078
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2400 GEPGDP 2405
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2399 GEPGDP 2404
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2403 GEPGDP 2408
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2393 GEPGDP 2398
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2406 GEPGDP 2411
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2397 GEPGDP 2402
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 5 GEPHDP 10
GEP DP
Sbjct: 2399 GEPGDP 2404
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 1 NGENGEP 7
NG GEP
Sbjct: 625 NGNTGEP 631
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 2 GENGEP 7
GENG P
Sbjct: 30 GENGVP 35
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 2 GENGE 6
GENGE
Sbjct: 588 GENGE 592
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NGENGEPHDP 10
NG PH P
Sbjct: 10 NGPTTPPHGP 19
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 1 NGENGEP 7
NG GEP
Sbjct: 625 NGNTGEP 631
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 NGENGEPHD 9
NG EP D
Sbjct: 2045 NGNKSEPFD 2053
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 NGENGEPHDP 10
NG PH P
Sbjct: 10 NGPTTPPHGP 19
>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 NGENGEPH 8
N E GEP
Sbjct: 58 NTETGEPQ 65
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 4 NGEPH 8
+GEPH
Sbjct: 450 DGEPH 454
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 NGEPHDP 10
+G+PH P
Sbjct: 334 SGQPHLP 340
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 NGEPHDP 10
+G+PH P
Sbjct: 334 SGQPHLP 340
>sp|US10_HCMVM|MEMBRANE glycoprotein US10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NGENGEPH 8
+GEN E H
Sbjct: 70 DGENHERH 77
>sp|US10_HCMVA|UNIQUE short US10 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 NGENGEPH 8
+GEN E H
Sbjct: 70 DGENHERH 77
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 2 GENGE 6
GENGE
Sbjct: 584 GENGE 588
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 2 GENGE 6
GENGE
Sbjct: 584 GENGE 588
>sp|SCP_EBVB9|SMALL capsomere-interacting protein|Epstein-Barr virus (strain B95-8)
Query: 1 NGENGEPHD 9
+G G+PHD
Sbjct: 158 SGGGGQPHD 166
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 2 GENGE 6
GENGE
Sbjct: 583 GENGE 587
>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)
Query: 1 NGENGEPHDP 10
NG + PH P
Sbjct: 18 NGRDIAPHAP 27
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 2 GENGE 6
GENGE
Sbjct: 584 GENGE 588
>sp|CRMB_CWPXG|SOLUBLE TNF receptor II|Cowpox virus (strain GRI-90 /
Query: 1 NGENGEPHDP 10
NG + PH P
Sbjct: 18 NGRDIAPHAP 27
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 1 NGENGEP 7
NG GEP
Sbjct: 279 NGSAGEP 285
26|SequenceR|135|126|YPRPGNGENG
>sp|Y15K_HBVD3|PUTATIVE uncharacterized 15.3 kDa protein|Hepatitis B virus genotype D
Query: 1 YPRPGNG 7
+P PGNG
Sbjct: 35 WPLPGNG 41
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 2 PRPGNGE 8
PRPG G+
Sbjct: 441 PRPGTGD 447
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 2 PRPGNGE 8
PRPG G+
Sbjct: 441 PRPGTGD 447
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 2 PRPGNGE 8
PRPG G+
Sbjct: 441 PRPGTGD 447
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype
Query: 1 YPRPGNGEN 9
+P+PG G++
Sbjct: 11 FPKPGMGKD 19
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 2 PRPGNGE 8
PRPG G+
Sbjct: 441 PRPGTGD 447
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 PRPGNGEN 9
P P GEN
Sbjct: 79 PNPSKGEN 86
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 3 RPGNG 7
RPGNG
Sbjct: 66 RPGNG 70
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 3 RPGNGEN 9
RPG G N
Sbjct: 161 RPGKGHN 167
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 3 RPGNGEN 9
RPG G N
Sbjct: 161 RPGKGHN 167
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 PRPGNG 7
PRPG G
Sbjct: 3070 PRPGPG 3075
>sp|UL91_HHV6Z|PROTEIN U62|Human herpesvirus 6B (strain Z29)
Query: 3 RPGNGEN 9
R GNG+N
Sbjct: 78 RQGNGQN 84
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 YPRPGNGE 8
YP P NG+
Sbjct: 1976 YPSPCNGD 1983
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 2 PRPGNGEN 9
PRP GEN
Sbjct: 151 PRPFVGEN 158
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 RPGNGENG 10
RPGN G
Sbjct: 285 RPGNNTGG 292
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 PRPGNGEN 9
PR G G N
Sbjct: 22 PRTGRGSN 29
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain
Query: 2 PRPGNGEN 9
PR G G N
Sbjct: 22 PRTGRGSN 29
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 RPGNGE 8
RPGN E
Sbjct: 457 RPGNNE 462
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 RPGNGE 8
RPGN E
Sbjct: 457 RPGNNE 462
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 RPGNGE 8
RPGN E
Sbjct: 457 RPGNNE 462
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 RPGNGE 8
RPGN E
Sbjct: 457 RPGNNE 462
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 RPGNGE 8
RPGN E
Sbjct: 457 RPGNNE 462
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 RPGNGE 8
RPGN E
Sbjct: 457 RPGNNE 462
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 RPGNGE 8
RPGN E
Sbjct: 457 RPGNNE 462
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 4 PGNGE 8
PGNGE
Sbjct: 769 PGNGE 773
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 PGNGE 8
PGNGE
Sbjct: 781 PGNGE 785
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 4 PGNGE 8
PGNGE
Sbjct: 769 PGNGE 773
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PRPGNGEN 9
P P G+N
Sbjct: 583 PSPARGQN 590
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 RPGNGENG 10
RPGN G
Sbjct: 287 RPGNNTGG 294
>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996
Query: 2 PRPGNGE 8
PRP +GE
Sbjct: 326 PRPKDGE 332
>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New
Query: 2 PRPGNGE 8
PRP +GE
Sbjct: 326 PRPKDGE 332
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 2 PRPGNGE 8
PRP +GE
Sbjct: 326 PRPKDGE 332
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 3 RPGNG 7
+PGNG
Sbjct: 985 KPGNG 989
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 3 RPGNG 7
+PGNG
Sbjct: 985 KPGNG 989
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 1 YPRPGNGEN 9
YP P N N
Sbjct: 654 YPIPANATN 662
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 YPRPG 5
+PRPG
Sbjct: 443 FPRPG 447
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 1 YPRPGNGEN 9
YP P N N
Sbjct: 639 YPIPANATN 647
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 1 YPRPGNGEN 9
YP P N N
Sbjct: 646 YPIPANATN 654
>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains
Query: 1 YPRPGNGENG 10
+PR + ENG
Sbjct: 7 FPRFSHEENG 16
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 1 YPRPGNGEN 9
YP P N N
Sbjct: 670 YPIPANATN 678
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 YPRPGNGEN 9
YP GN +N
Sbjct: 1344 YPLEGNWKN 1352
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 YPRPGNGEN 9
YP GN +N
Sbjct: 1344 YPLEGNWKN 1352
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 YPRPGNGEN 9
YP GN +N
Sbjct: 1344 YPLEGNWKN 1352
>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain
Query: 1 YPRPGNGENG 10
+PR + ENG
Sbjct: 7 FPRFSHEENG 16
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 YPRPGNGEN 9
YP GN +N
Sbjct: 1344 YPLEGNWKN 1352
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 PRPGNGEN 9
P P NGE+
Sbjct: 70 PPPPNGED 77
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 1 YPRPGNGE 8
+ RPG+G+
Sbjct: 457 FTRPGSGK 464
>sp|UNG_VACCC|URACIL-DNA glycosylase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YPRPGNG 7
YP+ G G
Sbjct: 70 YPKDGTG 76
>sp|UNG_MONPV|URACIL-DNA glycosylase|Monkeypox virus (MPXV)
Query: 1 YPRPGNG 7
YP+ G G
Sbjct: 70 YPKDGTG 76
>sp|UNG_VACCA|URACIL-DNA glycosylase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 YPRPGNG 7
YP+ G G
Sbjct: 70 YPKDGTG 76
>sp|UNG_VARV|URACIL-DNA glycosylase|Variola virus
Query: 1 YPRPGNG 7
YP+ G G
Sbjct: 70 YPKDGTG 76
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 3 RPGNGENG 10
R G+GE G
Sbjct: 1720 RVGSGEGG 1727
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 3 RPGNGENG 10
R G+GE G
Sbjct: 1719 RVGSGEGG 1726
>sp|UNG_VAR67|URACIL-DNA glycosylase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 YPRPGNG 7
YP+ G G
Sbjct: 70 YPKDGTG 76
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 3 RPGNGENG 10
R G+GE G
Sbjct: 1719 RVGSGEGG 1726
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 1 YPRPGNGEN 9
YP P N N
Sbjct: 642 YPIPANATN 650
27|SequenceR|140|131|AAGGGYPRPG
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 GGGYPRPG 10
GGG PRPG
Sbjct: 206 GGGGPRPG 213
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 AAGGGYPR 8
AAGGG PR
Sbjct: 1137 AAGGGNPR 1144
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 6 YPRPG 10
YPRPG
Sbjct: 949 YPRPG 953
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 AAGGGYPR 8
A GGG PR
Sbjct: 1136 ATGGGNPR 1143
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 AAGGGYPR 8
A GGG PR
Sbjct: 1136 ATGGGNPR 1143
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 AAGGGYPR 8
A GGG PR
Sbjct: 1136 ATGGGNPR 1143
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 AAGGGYPR 8
A GGG PR
Sbjct: 1136 ATGGGNPR 1143
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 AAGGGYPR 8
A GGG PR
Sbjct: 1136 ATGGGNPR 1143
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 AAGGGYPR 8
A GGG PR
Sbjct: 1136 ATGGGNPR 1143
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 AAGGGYPR 8
A GGG PR
Sbjct: 1136 ATGGGNPR 1143
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 AAGGGYPR 8
A GGG PR
Sbjct: 1136 ATGGGNPR 1143
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 AAGGGYPR 8
A GGG PR
Sbjct: 1136 ATGGGNPR 1143
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 3 GGGYPRPG 10
GG +P PG
Sbjct: 482 GGSHPTPG 489
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AAGGGYPRPG 10
AAG G+ PG
Sbjct: 36 AAGSGFNGPG 45
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 1 AAGGGYPRPG 10
AAG G+ PG
Sbjct: 36 AAGSGFNGPG 45
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 2 AGGGYPRP 9
+GG PRP
Sbjct: 309 SGGRSPRP 316
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 2 AGGGYPRP 9
+GG PRP
Sbjct: 309 SGGRSPRP 316
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 2 AGGGYPRP 9
+GG PRP
Sbjct: 311 SGGRSPRP 318
>sp|SLFN_VACCC|SCHLAFEN-LIKE protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 AGGGYPRP 9
+GG PRP
Sbjct: 73 SGGWSPRP 80
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 2 AGGGYPRP 9
GG PRP
Sbjct: 580 GAGGIPRP 587
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 GYPRPG 10
G PRPG
Sbjct: 277 GRPRPG 282
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 GYPRPG 10
G PRPG
Sbjct: 277 GRPRPG 282
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 AGGGYPRPG 10
GG Y +PG
Sbjct: 5048 GGGYYVKPG 5056
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 AAGGGYPRPG 10
A+ GG RPG
Sbjct: 382 ASPGGVQRPG 391
>sp|BZLF1_EBVB9|LYTIC switch protein BZLF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 AGGGYPRPG 10
AGG P+PG
Sbjct: 109 AGGEAPQPG 117
>sp|BZLF1_EBVG|LYTIC switch protein BZLF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 AGGGYPRPG 10
AGG P+PG
Sbjct: 109 AGGEAPQPG 117
>sp|V_MUMPZ|NON-STRUCTURAL protein V|Mumps virus genotype N (strain
Query: 2 AGGGYPRP 9
AG G PRP
Sbjct: 156 AGNGSPRP 163
>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12
Query: 3 GGGYPRPG 10
G G PRP
Sbjct: 142 GDGAPRPA 149
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 AAGGGY 6
A GGGY
Sbjct: 980 AGGGGY 985
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 4 GGYPRP 9
GG+P P
Sbjct: 948 GGFPLP 953
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 4 GGYPRP 9
GG+P P
Sbjct: 948 GGFPLP 953
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 GGYPRP 9
GG+P P
Sbjct: 948 GGFPLP 953
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 GGYPRP 9
GG+P P
Sbjct: 971 GGFPLP 976
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 GGYPRP 9
GG+P P
Sbjct: 971 GGFPLP 976
>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936
Query: 3 GGGYPR 8
GG YP+
Sbjct: 172 GGSYPK 177
>sp|BZLF1_EBVA8|LYTIC switch protein BZLF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 AGGGYPRPG 10
AGG P+PG
Sbjct: 109 AGGEAPQPG 117
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 GGGYPRP 9
G G PRP
Sbjct: 316 GAGVPRP 322
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 GGGYPRP 9
G G PRP
Sbjct: 316 GAGVPRP 322
>sp|VE6_HPV29|PROTEIN E6|Human papillomavirus 29
Query: 3 GGGYPR 8
G GYP+
Sbjct: 4 GDGYPK 9
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 GGGYPRP 9
G G PRP
Sbjct: 316 GAGVPRP 322
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 3 GGGYPRP 9
GG Y RP
Sbjct: 113 GGTYSRP 119
28|SequenceR|145|136|SCRLSAAGGG
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 SCRLSAAGGG 10
SC AAGGG
Sbjct: 1132 SCTCGAAGGG 1141
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 SCRLSAAGGG 10
SC A GGG
Sbjct: 1131 SCSCGATGGG 1140
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 SCRLSAAGGG 10
SC A GGG
Sbjct: 1131 SCTCGATGGG 1140
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 SCRLSAAGGG 10
SC A GGG
Sbjct: 1131 SCTCGATGGG 1140
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 SCRLSAAGGG 10
SC A GGG
Sbjct: 1131 SCTCGATGGG 1140
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 SCRLSAAGGG 10
SC A GGG
Sbjct: 1131 SCTCGATGGG 1140
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 SCRLSAAGGG 10
SC A GGG
Sbjct: 1131 SCTCGATGGG 1140
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 SCRLSAAGGG 10
SC A GGG
Sbjct: 1131 SCTCGATGGG 1140
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 SCRLSAAGGG 10
SC A GGG
Sbjct: 1131 SCTCGATGGG 1140
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 SCRLSAAGGG 10
SC A GGG
Sbjct: 1131 SCPCGATGGG 1140
>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979
Query: 1 SCRLSAAGG 9
S RLSA GG
Sbjct: 105 SIRLSAGGG 113
29|SequenceR|150|141|GAEPQSCRLS
>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus
Query: 2 AEPQSCRLS 10
++P++CRLS
Sbjct: 390 SKPENCRLS 398
>sp|UL84_HCMVA|PROTEIN UL84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 AEPQSCRLS 10
EPQ C+L+
Sbjct: 559 TEPQDCKLT 567
>sp|UL84_HCMVM|PROTEIN UL84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 AEPQSCRLS 10
EPQ C+L+
Sbjct: 560 TEPQDCKLT 568
>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 AEPQSCRLS 10
EPQ C+L+
Sbjct: 560 TEPQDCKLT 568
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 2 AEPQSCRL 9
A P +CRL
Sbjct: 530 AHPDACRL 537
>sp|UNG_HHV11|URACIL-DNA glycosylase|Human herpesvirus 1 (strain 17)
Query: 1 GAEPQSCRLS 10
G EP +CR S
Sbjct: 54 GGEPAACRSS 63
>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 5 QSCRLS 10
QSCR+S
Sbjct: 210 QSCRIS 215
>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 5 QSCRLS 10
QSCR+S
Sbjct: 210 QSCRIS 215
>sp|FUS_HRSV|FUSION glycoprotein F0|Human respiratory syncytial virus
Query: 5 QSCRLS 10
QSCR+S
Sbjct: 210 QSCRIS 215
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 4 PQSCRLS 10
PQSC L+
Sbjct: 221 PQSCYLN 227
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 PQSCRLS 10
PQSC L+
Sbjct: 221 PQSCYLN 227
>sp|PG097_VACCC|PROTEIN OPG097|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 PQSCRLS 10
PQSC L+
Sbjct: 222 PQSCYLN 228
>sp|PG097_MONPV|PROTEIN OPG097|Monkeypox virus (MPXV)
Query: 4 PQSCRLS 10
PQSC L+
Sbjct: 216 PQSCYLN 222
>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)
Query: 1 GAEPQS 6
GAEPQS
Sbjct: 271 GAEPQS 276
>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)
Query: 1 GAEPQS 6
GAEPQS
Sbjct: 271 GAEPQS 276
>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)
Query: 1 GAEPQS 6
GAEPQS
Sbjct: 271 GAEPQS 276
>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)
Query: 1 GAEPQS 6
GAEPQS
Sbjct: 271 GAEPQS 276
>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)
Query: 1 GAEPQS 6
GAEPQS
Sbjct: 271 GAEPQS 276
>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human
Query: 1 GAEPQS 6
GAEPQS
Sbjct: 271 GAEPQS 276
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 1 GAEPQSC 7
G PQSC
Sbjct: 124 GFPPQSC 130
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 5 QSCRLS 10
Q+CRLS
Sbjct: 2886 QNCRLS 2891
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 GAEPQSC 7
G PQSC
Sbjct: 124 GFPPQSC 130
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 GAEPQSC 7
G PQSC
Sbjct: 124 GFPPQSC 130
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 1 GAEPQSC 7
G PQSC
Sbjct: 124 GFPPQSC 130
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 GAEPQSC 7
G PQSC
Sbjct: 124 GFPPQSC 130
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 GAEPQSC 7
G PQSC
Sbjct: 124 GFPPQSC 130
>sp|LHDAG_HDVM2|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 4 PQSCR 8
PQSCR
Sbjct: 208 PQSCR 212
>sp|LHDAG_HDVM1|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 4 PQSCR 8
PQSCR
Sbjct: 208 PQSCR 212
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 GAEPQSC 7
G PQSC
Sbjct: 124 GFPPQSC 130
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 GAEPQSC 7
G PQSC
Sbjct: 124 GFPPQSC 130
>sp|LHDAG_HDVWO|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 4 PQSCR 8
PQSCR
Sbjct: 208 PQSCR 212
>sp|LHDAG_HDVIT|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 4 PQSCR 8
PQSCR
Sbjct: 208 PQSCR 212
>sp|LHDAG_HDVL1|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 4 PQSCR 8
PQSCR
Sbjct: 208 PQSCR 212
>sp|LHDAG_HDVAM|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 4 PQSCR 8
PQSCR
Sbjct: 208 PQSCR 212
>sp|LHDAG_HDVNA|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 4 PQSCR 8
PQSCR
Sbjct: 208 PQSCR 212
>sp|VE2_HPV58|REGULATORY protein E2|Human papillomavirus 58
Query: 2 AEPQSC 7
+EPQ C
Sbjct: 104 SEPQKC 109
>sp|LHDAG_HDVU2|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 4 PQSCR 8
PQSCR
Sbjct: 208 PQSCR 212
>sp|LHDAG_HDVD3|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 4 PQSCR 8
PQSCR
Sbjct: 208 PQSCR 212
>sp|NS1_INBPA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/PA/1979)
Query: 2 AEPQSCRLS 10
+EP+S R+S
Sbjct: 65 SEPESKRMS 73
>sp|NS1_INBSI|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 2 AEPQSCRLS 10
+EP+S R+S
Sbjct: 65 SEPESKRMS 73
>sp|NS1_INBGL|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GL/1954)
Query: 2 AEPQSCRLS 10
+EP+S R+S
Sbjct: 65 SEPESKRMS 73
>sp|NS1_INB|NON-STRUCTURAL protein 1|Influenza B virus (strain B/ID/1986)
Query: 2 AEPQSCRLS 10
+EP+S R+S
Sbjct: 65 SEPESKRMS 73
>sp|NS1_INBVJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Victoria/1987)
Query: 2 AEPQSCRLS 10
+EP+S R+S
Sbjct: 65 SEPESKRMS 73
>sp|NS1_INBGA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GA/1986)
Query: 2 AEPQSCRLS 10
+EP+S R+S
Sbjct: 65 SEPESKRMS 73
>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 4 PQSCR 8
P+SCR
Sbjct: 110 PESCR 114
>sp|NS1_INBRU|NON-STRUCTURAL protein 1|Influenza B virus (strain B/RU/1969)
Query: 2 AEPQSCRLS 10
+EP+S R+S
Sbjct: 65 SEPESKRMS 73
>sp|NS1_INBYA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Yamagata/1/1973)
Query: 2 AEPQSCRLS 10
+EP+S R+S
Sbjct: 65 SEPESKRMS 73
>sp|NS1_INBSJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/1964)
Query: 2 AEPQSCRLS 10
+EP+S R+S
Sbjct: 65 SEPESKRMS 73
>sp|NS1_INBHK|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Hong
Query: 2 AEPQSCRLS 10
+EP+S R+S
Sbjct: 65 SEPESKRMS 73
>sp|NS1_INBBA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/BA/1978)
Query: 2 AEPQSCRLS 10
+EP+S R+S
Sbjct: 65 SEPESKRMS 73
>sp|NS1_INBMD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Maryland/1959)
Query: 2 AEPQSCRLS 10
+EP+S R+S
Sbjct: 65 SEPESKRMS 73
>sp|NS1_INBAD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 2 AEPQSCRLS 10
+EP+S R+S
Sbjct: 65 SEPESKRMS 73
>sp|NS1_INBAC|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 2 AEPQSCRLS 10
+EP+S R+S
Sbjct: 65 SEPESKRMS 73
30|SequenceR|155|146|RSLGRGAEPQ
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 2 SLGRGAEP 9
SL RG+EP
Sbjct: 726 SLSRGSEP 733
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 2 SLGRGAEP 9
SLGRGA P
Sbjct: 411 SLGRGATP 418
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 GRGAEPQ 10
GRG++P+
Sbjct: 367 GRGSDPE 373
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RSLGRGAEPQ 10
++ GRG++P+
Sbjct: 365 KAPGRGSDPE 374
>sp|REV_HV1B8|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 54 LGRSAEP 60
>sp|REV_HV1BR|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 64 LGRSAEP 70
>sp|REV_HV1BN|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 54 LGRSAEP 60
>sp|REV_HV1H3|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 64 LGRSAEP 70
>sp|REV_HV1C4|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 64 LGRSAEP 70
>sp|REV_HV1B1|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 64 LGRSAEP 70
>sp|REV_HV112|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 64 LGRSAEP 70
>sp|REV_HV196|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 64 LGRSAEP 70
>sp|REV_HV1H2|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 64 LGRSAEP 70
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 RSLGRGAEP 9
RSLG A P
Sbjct: 619 RSLGSDANP 627
>sp|REV_HV1A2|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 64 LGRSAEP 70
>sp|REV_HV1OY|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 64 LGRSAEP 70
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 1 RSLGRGAEPQ 10
R L RG PQ
Sbjct: 352 RELIRGCTPQ 361
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 RSLGRGAEP 9
RSLG A P
Sbjct: 618 RSLGSDANP 626
>sp|REV_HV1W2|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 38 LGRSAEP 44
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 RSLGRGAEP 9
RSLG A P
Sbjct: 617 RSLGSDANP 625
>sp|REV_HV1MN|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 64 LGRPAEP 70
>sp|REV_HV1JR|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 64 LGRPAEP 70
>sp|REV_HV1J3|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 61 LGRPAEP 67
>sp|REV_HV1ET|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 64 LGRPAEP 70
>sp|REV_HV1U4|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 64 LGRPAEP 70
>sp|REV_HV1EL|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 64 LGRPAEP 70
>sp|REV_HV1SE|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 64 LGRPAEP 70
>sp|REV_HV1S9|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 64 LGRPAEP 70
>sp|REV_HV1S2|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 64 LGRPAEP 70
>sp|REV_HV1Z3|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 38 LGRPAEP 44
>sp|REV_HV193|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 64 LGRPAEP 70
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 RSLGRGA 7
RSL RGA
Sbjct: 2551 RSLSRGA 2557
>sp|REV_HV19N|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR AEP
Sbjct: 64 LGRPAEP 70
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RSLGRGA 7
++LGRGA
Sbjct: 337 KALGRGA 343
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 4 GRGAEP 9
G GAEP
Sbjct: 72 GEGAEP 77
>sp|REV_HV1S3|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LGRGAEP 9
LGR +EP
Sbjct: 64 LGRSSEP 70
31|SequenceR|160|151|KSLPKRSLGR
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 1 KSLPKRS 7
KS+PKR+
Sbjct: 10 KSIPKRT 16
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 1 KSLPKRS 7
KS+PKR+
Sbjct: 10 KSIPKRT 16
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 4 PKRSLGR 10
P+R LGR
Sbjct: 1785 PRRRLGR 1791
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 4 PKRSLGR 10
P+R LGR
Sbjct: 1785 PRRRLGR 1791
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 4 PKRSLGR 10
P+R LGR
Sbjct: 1786 PRRRLGR 1792
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 KSLPKRSLGR 10
++LP S+GR
Sbjct: 826 RALPYTSIGR 835
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 SLPKRS 7
S+PKRS
Sbjct: 210 SIPKRS 215
32|SequenceR|165|156|AKERRKSLPK
>sp|U22_HHV6Z|PROTEIN U22|Human herpesvirus 6B (strain Z29)
Query: 2 KERRKSLPK 10
KERR+ LP+
Sbjct: 160 KERRRFLPR 168
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 KERRKSLPK 10
K R+K LPK
Sbjct: 1686 KPRKKDLPK 1694
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 KERRKSLPK 10
K R+K LPK
Sbjct: 1683 KPRKKDLPK 1691
>sp|US20_HCMVT|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 RRKSLPK 10
RR+SLP+
Sbjct: 37 RRRSLPQ 43
>sp|US20_HCMVA|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 RRKSLPK 10
RR+SLP+
Sbjct: 37 RRRSLPQ 43
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 RRKSLPK 10
RRK +PK
Sbjct: 61 RRKPIPK 67
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 KERRKSLPK 10
+ERRK++ K
Sbjct: 1330 QERRKTMAK 1338
33|SequenceR|170|161|DLGESAKERR
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 DLGESAKER 9
DLG++ KER
Sbjct: 1233 DLGQTRKER 1241
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 DLGESAKER 9
DLG++ KE+
Sbjct: 1242 DLGQTRKEK 1250
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 DLGESAKER 9
DLG++ KE+
Sbjct: 1234 DLGQTRKEK 1242
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 DLGESAKERR 10
D+G+S +RR
Sbjct: 484 DVGKSGFQRR 493
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 DLGESAKERR 10
D+G+S +RR
Sbjct: 484 DVGKSGFQRR 493
34|SequenceR|175|166|PKGQADLGES
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 PKGQADLG 8
P+G DLG
Sbjct: 1096 PRGNVDLG 1103
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 PKGQADLGES 10
P+G +D G+S
Sbjct: 1110 PQGSSDNGDS 1119
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 PKGQADLGES 10
P+G +D G+S
Sbjct: 1110 PQGSSDNGDS 1119
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 2 KGQADLGES 10
+G AD+G+S
Sbjct: 214 QGCADIGKS 222
35|SequenceR|180|171|PSRTRPKGQA
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 1 PSRTRPK 7
PSR RP+
Sbjct: 244 PSRKRPR 250
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 PSRTRPKGQ 9
P R+RP GQ
Sbjct: 32 PRRSRPAGQ 40
>sp|VP22_HHV2H|TEGUMENT protein VP22|Human herpesvirus 2 (strain HG52)
Query: 1 PSRTRPKGQ 9
P R RP+G+
Sbjct: 45 PMRARPRGE 53
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 4 TRPKGQA 10
TRP G+A
Sbjct: 2744 TRPSGKA 2750
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 4 TRPKGQ 9
TRP+GQ
Sbjct: 134 TRPEGQ 139
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 4 TRPKGQ 9
TRP+GQ
Sbjct: 135 TRPEGQ 140
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 4 TRPKGQ 9
TRP+GQ
Sbjct: 135 TRPEGQ 140
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 4 TRPKGQ 9
TRP+GQ
Sbjct: 130 TRPEGQ 135
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 4 TRPKGQ 9
TRP+GQ
Sbjct: 130 TRPEGQ 135
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 4 TRPKGQ 9
TRP+GQ
Sbjct: 135 TRPEGQ 140
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 SRTRPKGQA 10
SRT P G A
Sbjct: 2821 SRTAPTGSA 2829
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 RTRPKG 8
RT+P+G
Sbjct: 167 RTKPRG 172
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 PSRTRPKGQ 9
PSR R +GQ
Sbjct: 486 PSRGRGRGQ 494
36|SequenceR|185|176|GGPLAPSRTR
>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GGPLAPS 7
GGPL P+
Sbjct: 107 GGPLGPA 113
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQVR 229
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29
Query: 1 GGPLAPSRTR 10
GGP+ +RTR
Sbjct: 280 GGPVDSNRTR 289
>sp|CEP2_HCMVM|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GGPLAPS 7
GGPL P+
Sbjct: 107 GGPLGPA 113
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 222 AGPIAPGQMR 231
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPVAPGQVR 229
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 221 AGPIAPGQMR 230
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
Query: 1 GGPLAPSRTR 10
G L+P +TR
Sbjct: 446 AGELSPKQTR 455
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 218 AGPVAPGQMR 227
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPVAPGQMR 229
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 217 AGPVAPGQMR 226
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 218 AGPVAPGQMR 227
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 PLAPSRT 9
PLAPS T
Sbjct: 630 PLAPSDT 636
>sp|VE8E2_HPV29|PROTEIN E8^E2C|Human papillomavirus 29
Query: 1 GGPLAPSRTR 10
GGP+ +RTR
Sbjct: 80 GGPVDSNRTR 89
>sp|NS1_I96A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 GGPLAPSRTR 10
G PL P++ R
Sbjct: 211 GPPLTPTQKR 220
>sp|GAG_HV1W2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQVR 229
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 PLAPSRTR 10
P+AP R R
Sbjct: 1781 PIAPPRRR 1788
>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 PLAPSRTR 10
P+AP R R
Sbjct: 1781 PIAPPRRR 1788
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 PLAPSRTR 10
P+AP R R
Sbjct: 1782 PIAPPRRR 1789
>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPVAPGQVR 229
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 223 AGPIAPGQMR 232
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 221 AGPIAPGQMR 230
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 GPLAPSRTR 10
P+AP R R
Sbjct: 1730 APVAPPRRR 1738
>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 5 APSRTR 10
APSRT+
Sbjct: 1744 APSRTK 1749
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPIAPGQMR 229
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 218 AGPVAPGQMR 227
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 222 AGPIAPGQMR 231
>sp|NS1_I78A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/18/1978
Query: 1 GGPLAPSRTR 10
G PL P + R
Sbjct: 211 GPPLTPKQKR 220
>sp|NS1_I78A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/2/1978
Query: 1 GGPLAPSRTR 10
G PL P + R
Sbjct: 211 GPPLTPKQKR 220
>sp|NS1_I77A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Alaska/6/1977
Query: 1 GGPLAPSRTR 10
G PL P + R
Sbjct: 211 GPPLTPKQKR 220
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 220 AGPVAPGQMR 229
>sp|NS1_I89A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Beijing/352/1989
Query: 1 GGPLAPSRTR 10
G PL P + R
Sbjct: 211 GPPLTPKQKR 220
>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 218 AGPVAPGQMR 227
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 GPLAPSR 8
GPL PS+
Sbjct: 882 GPLPPSQ 888
>sp|NS1_I73A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Port
Query: 1 GGPLAPSRTR 10
G PL P + R
Sbjct: 211 GPPLTPKQKR 220
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GGPLAPSRTR 10
GP+AP + R
Sbjct: 217 AGPVAPGQMR 226
>sp|NS1_I76A6|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/110/1976
Query: 1 GGPLAPSRTR 10
G PL P + R
Sbjct: 211 GPPLTPKQKR 220
>sp|NS1_I83A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 1 GGPLAPSRTR 10
G PL P + R
Sbjct: 211 GPPLTPKQKR 220
>sp|NS1_I77A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 GGPLAPSRTR 10
G PL P + R
Sbjct: 211 GPPLTPKQKR 220
>sp|NS1_I75A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Beijing/39/1975
Query: 1 GGPLAPSRTR 10
G PL P + R
Sbjct: 211 GPPLTPKQKR 220
>sp|NS1_I80A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/4/1980
Query: 1 GGPLAPSRTR 10
G PL P + R
Sbjct: 211 GPPLTPKQKR 220
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 2 GPLAPS 7
GPL PS
Sbjct: 881 GPLPPS 886
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 2 GPLAPS 7
GPL PS
Sbjct: 881 GPLPPS 886
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 2 GPLAPSRTR 10
GPLAP+ R
Sbjct: 608 GPLAPNTPR 616
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 GGPLAPSR 8
GGP P+R
Sbjct: 794 GGPATPTR 801
37|SequenceR|190|181|PGPSRGGPLA
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 PGPSRG 6
PGPSRG
Sbjct: 38 PGPSRG 43
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 PGPSRG 6
PGPSRG
Sbjct: 38 PGPSRG 43
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 PGPSRG 6
PGPSRG
Sbjct: 38 PGPSRG 43
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 PGPSRG 6
PGPSRG
Sbjct: 38 PGPSRG 43
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 PGPSRG 6
PGPSRG
Sbjct: 38 PGPSRG 43
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 PGPSRG 6
PGPSRG
Sbjct: 38 PGPSRG 43
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 PGPSRG 6
PGPSRG
Sbjct: 38 PGPSRG 43
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 PGPSRG 6
PGPSRG
Sbjct: 38 PGPSRG 43
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 PGPSRG 6
PGPSRG
Sbjct: 38 PGPSRG 43
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 PGPSRG 6
PGPSRG
Sbjct: 38 PGPSRG 43
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 PSRGGP 8
P+RGGP
Sbjct: 720 PNRGGP 725
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 GPSRGGPLA 10
G SRG PLA
Sbjct: 21 GTSRGNPLA 29
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 3 PSRGGP 8
P+RGGP
Sbjct: 10 PTRGGP 15
>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain
Query: 1 PGPSRGGP 8
PGP+ G P
Sbjct: 97 PGPNIGSP 104
>sp|EBNA2_EBVA8|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PGPSRGGPL 9
PGPS GP+
Sbjct: 370 PGPSTAGPV 378
>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PSRGGP 8
PSRG P
Sbjct: 185 PSRGHP 190
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 1 PGPSRGGP 8
PGP+ G P
Sbjct: 97 PGPNIGSP 104
>sp|M2_I56A3|MATRIX protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 2 GPSRGG 7
GPS GG
Sbjct: 62 GPSTGG 67
>sp|M2_I02A4|MATRIX protein 2|Influenza A virus (strain A/Silky
Query: 2 GPSRGG 7
GPS GG
Sbjct: 62 GPSTGG 67
>sp|M2_I02A2|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 GPSRGG 7
GPS GG
Sbjct: 62 GPSTGG 67
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 GPSRGGPLA 10
GP R GPLA
Sbjct: 105 GPLRFGPLA 113
>sp|M2_I02A1|MATRIX protein 2|Influenza A virus (strain A/Guinea
Query: 2 GPSRGG 7
GPS GG
Sbjct: 55 GPSTGG 60
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 6 GGPLA 10
GGPLA
Sbjct: 59 GGPLA 63
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 6 GGPLA 10
GGPLA
Sbjct: 59 GGPLA 63
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PGPSRG 6
P PSRG
Sbjct: 17 PRPSRG 22
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PGPSRG 6
P PSRG
Sbjct: 17 PRPSRG 22
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PGPSRGGPLA 10
P PS GP+
Sbjct: 280 PDPSACGPVG 289
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PGPSRGGPLA 10
P PS GP+
Sbjct: 280 PDPSACGPVG 289
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PGPSRGGPLA 10
P PS GP+
Sbjct: 280 PDPSACGPVG 289
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 5 RGGPLA 10
RGGPL
Sbjct: 108 RGGPLG 113
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PGPSRGG 7
PGPS GG
Sbjct: 34 PGPSTGG 40
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 5 RGGPLA 10
RGGPL
Sbjct: 108 RGGPLG 113
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GPSRG 6
GPSRG
Sbjct: 461 GPSRG 465
38|SequenceR|195|186|ELARCPGPSR
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 1 ELARCPG 7
E+ RCPG
Sbjct: 736 EIVRCPG 742
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ELARCPG 7
E+ RCPG
Sbjct: 1059 EIVRCPG 1065
Query: 1 ELARC 5
ELARC
Sbjct: 204 ELARC 208
>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 5 CPGPSR 10
CP PSR
Sbjct: 60 CPSPSR 65
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1
Query: 1 ELARCPGPSR 10
+LAR GP+R
Sbjct: 363 DLARSAGPAR 372
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 ELARCPGPS 9
E A CPG +
Sbjct: 1063 EFAECPGTT 1071
>sp|B9_HHV6Z|PROTEIN B9|Human herpesvirus 6B (strain Z29)
Query: 4 RCPGPS 9
+CPGPS
Sbjct: 74 KCPGPS 79
>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12
Query: 2 LARCPGP 8
L++CP P
Sbjct: 21 LSKCPHP 27
>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)
Query: 1 ELARCPGPSR 10
++ +CP P R
Sbjct: 27 QIPKCPDPER 36
>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)
Query: 1 ELARCPGPSR 10
++ +CP P R
Sbjct: 27 QIPKCPDPER 36
>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)
Query: 1 ELARC 5
ELARC
Sbjct: 211 ELARC 215
>sp|U8_HHV6U|PROTEIN U8|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ELARC 5
ELARC
Sbjct: 204 ELARC 208
>sp|Y190_ADE07|UNCHARACTERIZED 19.0 kDa early protein|Human adenovirus B serotype 7
Query: 5 CPGPSR 10
CPGP R
Sbjct: 30 CPGPVR 35
>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)
Query: 1 ELARC 5
ELARC
Sbjct: 259 ELARC 263
>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human
Query: 3 ARCPG 7
+RCPG
Sbjct: 177 SRCPG 181
>sp|UL131_HCMVA|UNCHARACTERIZED protein UL131|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LARCP 6
LARCP
Sbjct: 57 LARCP 61
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ARCPGPSR 10
+ C GP R
Sbjct: 378 SNCKGPKR 385
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 LARCP 6
LARCP
Sbjct: 426 LARCP 430
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 LARCPG 7
LARCP
Sbjct: 435 LARCPA 440
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 LARCPG 7
LARCP
Sbjct: 435 LARCPA 440
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 2 LARCP 6
LARCP
Sbjct: 427 LARCP 431
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 LARCP 6
LARCP
Sbjct: 426 LARCP 430
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 LARCPG 7
LARCP
Sbjct: 435 LARCPA 440
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 LARCPG 7
LARCP
Sbjct: 434 LARCPA 439
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 LARCP 6
LARCP
Sbjct: 426 LARCP 430
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 LARCPG 7
LARCP
Sbjct: 435 LARCPA 440
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 LARCPG 7
LARCP
Sbjct: 434 LARCPA 439
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 LARCP 6
LARCP
Sbjct: 427 LARCP 431
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 2 LARCP 6
LARCP
Sbjct: 427 LARCP 431
>sp|HBSAG_HBVF6|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 2 LARCPG 7
L RCPG
Sbjct: 219 LPRCPG 224
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 2 LARCP 6
LARCP
Sbjct: 427 LARCP 431
39|SequenceR|200|191|EAQGGELARC
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 EAQGGELARC 10
E GGE +RC
Sbjct: 1714 ETLGGERSRC 1723
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 EAQGGELARC 10
E GGE RC
Sbjct: 1714 ETLGGERVRC 1723
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 3 QGGELARC 10
+GG+LA C
Sbjct: 209 EGGQLASC 216
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 QGGELARC 10
GG L RC
Sbjct: 2688 HGGSLVRC 2695
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 QGGELARC 10
GG L RC
Sbjct: 2688 HGGSLVRC 2695
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 QGGELARC 10
GG L RC
Sbjct: 2688 HGGNLVRC 2695
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 QGGELARC 10
GG L RC
Sbjct: 2688 HGGNLVRC 2695
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 EAQGGELARC 10
E GG+ +RC
Sbjct: 1714 ETLGGDRSRC 1723
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 EAQGGELARC 10
E GG+ +RC
Sbjct: 1714 ETLGGDKSRC 1723
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 EAQGGELARC 10
E GG+ +RC
Sbjct: 1714 ETLGGDKSRC 1723
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 EAQGGELARC 10
E GG+ +RC
Sbjct: 1714 ETLGGDKSRC 1723
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 EAQGGELARC 10
E GG+ +RC
Sbjct: 1714 ETLGGDKSRC 1723
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 QGGELARC 10
GG L RC
Sbjct: 2688 HGGSLIRC 2695
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 AQGGELARC 10
+QGG A C
Sbjct: 2955 SQGGRAATC 2963
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 AQGGELARC 10
+QGG A C
Sbjct: 2932 SQGGRAATC 2940
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 AQGGELARC 10
+QGG A C
Sbjct: 2932 SQGGRAATC 2940
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 AQGGELARC 10
+QGG A C
Sbjct: 2932 SQGGRAATC 2940
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 AQGGELARC 10
+QGG A C
Sbjct: 2932 SQGGRAATC 2940
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 AQGGELARC 10
+QGG A C
Sbjct: 2932 SQGGRAATC 2940
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 AQGGELARC 10
+QGG A C
Sbjct: 2932 SQGGRAATC 2940
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 AQGGELARC 10
+QGG A C
Sbjct: 2932 SQGGRAATC 2940
>sp|E1BS_ADE07|E1B protein, small T-antigen|Human adenovirus B serotype 7
Query: 4 GGELAR 9
GG+LAR
Sbjct: 33 GGDLAR 38
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 QGGELARC 10
QGG A C
Sbjct: 2956 QGGRAATC 2963
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 QGGELARC 10
QG EL RC
Sbjct: 1035 QGCELCRC 1042
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 AQGGELAR 9
A+GG +AR
Sbjct: 1862 AKGGAIAR 1869
40|SequenceR|205|196|RRLRVEAQGG
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 1 RRLRVEAQ 8
RRL+ EAQ
Sbjct: 323 RRLKTEAQ 330
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 RRLRVEAQGG 10
RR+ V++ GG
Sbjct: 2187 RRIMVQSSGG 2196
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 RLRVEAQ 8
RLR EAQ
Sbjct: 603 RLRAEAQ 609
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 RLRVEAQG 9
RLR EAQ
Sbjct: 584 RLRAEAQA 591
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 RLRVEAQ 8
RLR EAQ
Sbjct: 603 RLRAEAQ 609
41|SequenceR|210|201|ASSANRRLRV
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 ANRRLR 9
ANRRLR
Sbjct: 2 ANRRLR 7
42|SequenceR|215|206|GQLRGASSAN
***** No hits found ******
43|SequenceR|220|211|AGGALGQLRG
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 AGGALGQLR 9
+GG +GQ R
Sbjct: 1220 SGGQIGQHR 1228
>sp|VIL6_HHV8P|VIRAL interleukin-6 homolog|Human herpesvirus 8 type P
Query: 3 GALGQLRG 10
G LG+L+G
Sbjct: 156 GLLGRLQG 163
44|SequenceR|225|216|EKQGPAGGAL
>sp|NS8B_SARS|ORF8B protein|Severe acute respiratory syndrome coronavirus
Query: 3 QGPAGGAL 10
Q PAGGAL
Sbjct: 49 QDPAGGAL 56
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 1 EKQGPAGGA 9
++QG AGG+
Sbjct: 843 QRQGAAGGS 851
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 EKQGP 5
EKQGP
Sbjct: 919 EKQGP 923
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 2 KQGPAGG 8
K+GPA G
Sbjct: 140 KRGPASG 146
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 KQGPAGG 8
K+GPA G
Sbjct: 140 KRGPASG 146
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 2 KQGPAGG 8
K+GPA G
Sbjct: 140 KRGPANG 146
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 EKQGPAGG 8
EK+ PA G
Sbjct: 96 EKENPANG 103
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 2 KQGPAGGAL 10
+ GP+GG +
Sbjct: 69 RPGPSGGGV 77
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 5 PAGGAL 10
PAGGA+
Sbjct: 612 PAGGAV 617
>sp|MIR2_HHV8P|E3 ubiquitin-protein ligase MIR2|Human herpesvirus 8 type P
Query: 4 GPAGG 8
GPAGG
Sbjct: 188 GPAGG 192
45|SequenceR|230|221|EFPRCEKQGP
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 2 FPRCEKQGP 10
P CE++GP
Sbjct: 241 LPACEQEGP 249
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 EFPRCEKQGP 10
++P+C++ P
Sbjct: 5010 DYPKCDRAMP 5019
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 EFPRCEKQGP 10
++P+C++ P
Sbjct: 4987 DYPKCDRAMP 4996
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 EFPRCEKQGP 10
++P+C++ P
Sbjct: 4996 DYPKCDRAMP 5005
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 EFPRCEKQGP 10
++P+C++ P
Sbjct: 4983 DYPKCDRAMP 4992
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 EFPRCEKQGP 10
++P+C++ P
Sbjct: 5021 DYPKCDRAMP 5030
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 EFPRCEKQGP 10
++P+C++ P
Sbjct: 5041 DYPKCDRAMP 5050
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 EFPRCEKQGP 10
++P+C++ P
Sbjct: 5071 DYPKCDRAMP 5080
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 EFPRCEKQGP 10
++P+C++ P
Sbjct: 4681 DYPKCDRAMP 4690
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 EFPRCEKQG 9
E+P+C KQG
Sbjct: 1897 EYPKC-KQG 1904
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 EFPRCEKQGP 10
++P+C++ P
Sbjct: 4656 DYPKCDRALP 4665
>sp|K81_HHV8P|PROTEIN K8.1|Human herpesvirus 8 type P
Query: 3 PRCEKQGP 10
PRC ++ P
Sbjct: 218 PRCRRKKP 225
>sp|VPK2_VAR67|SERINE/THREONINE-PROTEIN kinase 2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 EFPRCE 6
E PRC+
Sbjct: 296 ELPRCD 301
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 EFPRC 5
+FPRC
Sbjct: 161 KFPRC 165
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 EFPRCEKQ 8
E+P+C+ +
Sbjct: 1886 EYPKCKSE 1893
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 PRCEKQGP 10
PRC GP
Sbjct: 93 PRCLFAGP 100
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PRCEKQGP 10
PRC GP
Sbjct: 93 PRCLFAGP 100
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PRCEKQGP 10
PRC GP
Sbjct: 94 PRCLFAGP 101
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 1 EFPRCEKQG 9
+ P C KQG
Sbjct: 236 KMPFCRKQG 244
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 2 FPRCEK 7
+PRC++
Sbjct: 288 YPRCDR 293
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 5 CEKQGP 10
C K+GP
Sbjct: 1085 CSKRGP 1090
Query: 1 EFPRCE 6
E+P+C+
Sbjct: 1898 EYPKCK 1903
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 EFPRCE 6
E+P+C+
Sbjct: 1895 EYPKCK 1900
Query: 5 CEKQGP 10
CE +GP
Sbjct: 1078 CEHRGP 1083
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 EFPRCE 6
E+P+C+
Sbjct: 1897 EYPKCK 1902
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 EFPRCE 6
E+P+C+
Sbjct: 1898 EYPKCK 1903
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 EFPRCE 6
E+P+C+
Sbjct: 1898 EYPKCK 1903
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 EFPRCE 6
E+P+C+
Sbjct: 1898 EYPKCK 1903
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 EFPRCE 6
E+P+C+
Sbjct: 1897 EYPKCK 1902
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 PRCEKQG 9
P CEKQ
Sbjct: 771 PFCEKQA 777
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 EFPRCE 6
E+P+C+
Sbjct: 1899 EYPKCK 1904
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 EFPRCE 6
E+P+C+
Sbjct: 1899 EYPKCK 1904
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 EFPRCE 6
E+P+C+
Sbjct: 1892 EYPKCK 1897
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 4 RCEKQG 9
+CEK+G
Sbjct: 1067 KCEKRG 1072
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 1 EFPRC 5
+FPRC
Sbjct: 131 DFPRC 135
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 5 CEKQGP 10
C K+GP
Sbjct: 1085 CSKRGP 1090
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 FPRC 5
FPRC
Sbjct: 132 FPRC 135
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 2 FPRC 5
FPRC
Sbjct: 132 FPRC 135
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 4 RCEKQG 9
+CEK+G
Sbjct: 1067 KCEKRG 1072
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 FPRC 5
FPRC
Sbjct: 132 FPRC 135
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 FPRC 5
FPRC
Sbjct: 132 FPRC 135
>sp|E434_ADE12|EARLY E4 34 kDa protein|Human adenovirus A serotype 12
Query: 1 EFPRCEKQ 8
+ P CE+Q
Sbjct: 18 QLPPCEEQ 25
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 2 FPRCE 6
FPRC+
Sbjct: 98 FPRCD 102
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 2 FPRCE 6
FPRC+
Sbjct: 98 FPRCD 102
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 2 FPRC 5
FPRC
Sbjct: 132 FPRC 135
>sp|VSGP_TAFVC|PRE-SMALL/SECRETED glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 1 EFPRC 5
+FPRC
Sbjct: 131 DFPRC 135
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 FPRCE 6
FPRC+
Sbjct: 98 FPRCD 102
>sp|VSSGP_EBOZM|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Mayinga-76)
Query: 2 FPRC 5
FPRC
Sbjct: 132 FPRC 135
>sp|VSSGP_EBOZ5|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Kikwit-95)
Query: 2 FPRC 5
FPRC
Sbjct: 132 FPRC 135
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 FPRC 5
FPRC
Sbjct: 132 FPRC 135
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 FPRC 5
FPRC
Sbjct: 132 FPRC 135
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 FPRC 5
FPRC
Sbjct: 132 FPRC 135
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 2 FPRCEKQG 9
F RC K+G
Sbjct: 603 FCRCVKRG 610
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 FPRC 5
FPRC
Sbjct: 133 FPRC 136
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 2 FPRC 5
FPRC
Sbjct: 133 FPRC 136
46|SequenceR|235|226|SPLYVEFPRC
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 PLYVEFPRC 10
P+YV + RC
Sbjct: 199 PMYVHYGRC 207
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 SPLYVEFPRC 10
+PL +EF C
Sbjct: 1058 TPLVIEFAEC 1067
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 PLYVEFPRC 10
P Y FP C
Sbjct: 2480 PFYERFPLC 2488
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 PLYVEFPRC 10
P Y FP C
Sbjct: 2480 PFYERFPLC 2488
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 SPLYVEFPRC 10
S +YV + RC
Sbjct: 195 SAVYVRYGRC 204
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 SPLYVEFPRC 10
S +YV + RC
Sbjct: 195 SSVYVRYGRC 204
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 LYVEFPRC 10
+Y+E+ RC
Sbjct: 188 VYLEYGRC 195
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 LYVEFPRC 10
+Y+E+ RC
Sbjct: 188 VYLEYGRC 195
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 LYVEFPRC 10
+Y+E+ RC
Sbjct: 188 VYLEYGRC 195
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 LYVEFPRC 10
+Y+E+ RC
Sbjct: 188 VYLEYGRC 195
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 LYVEFPRC 10
+Y+E+ RC
Sbjct: 188 VYLEYGRC 195
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 LYVEFPRC 10
+Y+E+ RC
Sbjct: 188 VYLEYGRC 195
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 LYVEFPRC 10
+YV++ RC
Sbjct: 201 VYVQYGRC 208
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 LYVEFPRC 10
+YV++ RC
Sbjct: 201 VYVQYGRC 208
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 LYVEFPRC 10
+YV++ RC
Sbjct: 201 VYVQYGRC 208
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 LYVEFPRC 10
+YV++ RC
Sbjct: 201 VYVQYGRC 208
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 3 LYVEFPRC 10
+YV++ RC
Sbjct: 128 VYVQYGRC 135
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 LYVEFPRC 10
+YV++ RC
Sbjct: 201 VYVQYGRC 208
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 LYVEFPRC 10
+YV++ RC
Sbjct: 201 VYVQYGRC 208
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 LYVEFPRC 10
+YV++ RC
Sbjct: 201 VYVQYGRC 208
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 LYVEFPRC 10
+YV++ RC
Sbjct: 201 VYVQYGRC 208
>sp|VB18_VARV|ANKYRIN repeat protein B18|Variola virus
Query: 2 PLYVEFPRC 10
P+Y+ RC
Sbjct: 95 PIYILLTRC 103
>sp|VB18_VAR67|ANKYRIN repeat protein B18|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 PLYVEFPRC 10
P+Y+ RC
Sbjct: 95 PIYILLTRC 103
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 SPLYVEFPRC 10
S LYV P C
Sbjct: 703 SVLYVSDPHC 712
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 SPLYVEFPRC 10
S LYV P C
Sbjct: 703 SVLYVSDPHC 712
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 SPLYVEFPRC 10
S LYV P C
Sbjct: 703 SVLYVSDPHC 712
>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PLYVEFPRC 10
P+Y+ RC
Sbjct: 95 PVYILLTRC 103
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PLYVEFPRC 10
P+Y+ RC
Sbjct: 95 PVYILLTRC 103
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 LYVEFPRC 10
+YV + RC
Sbjct: 197 VYVRYGRC 204
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 LYVEFPRC 10
+YV + RC
Sbjct: 199 VYVNYGRC 206
>sp|PG077_VAR67|TELOMERE-BINDING protein OPG077|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 SPLYVE 6
SPLY++
Sbjct: 119 SPLYID 124
>sp|PG077_VACCT|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Tian Tan)
Query: 1 SPLYVE 6
SPLY++
Sbjct: 119 SPLYID 124
>sp|PG077_VACCP|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 SPLYVE 6
SPLY++
Sbjct: 119 SPLYID 124
>sp|PG077_VACCC|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SPLYVE 6
SPLY++
Sbjct: 119 SPLYID 124
>sp|PG077_VACCA|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Ankara) (VACV)
Query: 1 SPLYVE 6
SPLY++
Sbjct: 119 SPLYID 124
>sp|PG077_MONPZ|TELOMERE-BINDING protein OPG077|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 1 SPLYVE 6
SPLY++
Sbjct: 119 SPLYID 124
>sp|PG077_MONPV|TELOMERE-BINDING protein OPG077|Monkeypox virus (MPXV)
Query: 1 SPLYVE 6
SPLY++
Sbjct: 119 SPLYID 124
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 SPLYVEFPRC 10
+ +Y+ + RC
Sbjct: 192 TEIYIHYGRC 201
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 1 SPLYVEFP 8
+PLY+E P
Sbjct: 160 NPLYIEPP 167
47|SequenceR|240|231|PRMKGSPLYV
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 PRMKGSPLYV 10
PR++GS +YV
Sbjct: 698 PRLEGSTIYV 707
>sp|VP1_POVJC|MAJOR capsid protein VP1|JC polyomavirus (JCPyV) (JCV)
Query: 1 PRMKGSPLY 9
PR+ G P+Y
Sbjct: 307 PRVDGQPMY 315
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 4 KGSPLYV 10
KGSP Y+
Sbjct: 509 KGSPYYI 515
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 4 KGSPLYV 10
KGSP Y+
Sbjct: 509 KGSPYYI 515
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 4 KGSPLYV 10
KGSP Y+
Sbjct: 508 KGSPYYI 514
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 4 KGSPLYV 10
KGSP Y+
Sbjct: 508 KGSPYYI 514
>sp|MC132_MCV1|PROTEIN MC132|Molluscum contagiosum virus subtype 1
Query: 1 PRMKGSPL 8
PR++G+PL
Sbjct: 102 PRVQGNPL 109
>sp|PG077_VAR67|TELOMERE-BINDING protein OPG077|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 KGSPLYV 10
K SPLY+
Sbjct: 117 KSSPLYI 123
>sp|PG077_VACCT|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Tian Tan)
Query: 4 KGSPLYV 10
K SPLY+
Sbjct: 117 KSSPLYI 123
>sp|PG077_VACCP|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain L-IVP) (VACV)
Query: 4 KGSPLYV 10
K SPLY+
Sbjct: 117 KSSPLYI 123
>sp|PG077_VACCC|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 KGSPLYV 10
K SPLY+
Sbjct: 117 KSSPLYI 123
>sp|PG077_VACCA|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Ankara) (VACV)
Query: 4 KGSPLYV 10
K SPLY+
Sbjct: 117 KSSPLYI 123
>sp|PG077_MONPZ|TELOMERE-BINDING protein OPG077|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 4 KGSPLYV 10
K SPLY+
Sbjct: 117 KSSPLYI 123
>sp|PG077_MONPV|TELOMERE-BINDING protein OPG077|Monkeypox virus (MPXV)
Query: 4 KGSPLYV 10
K SPLY+
Sbjct: 117 KSSPLYI 123
>sp|US08_HCMVM|MEMBRANE glycoprotein US8|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PRMKGSPLYV 10
PR G P YV
Sbjct: 38 PRQHGEPNYV 47
>sp|US08_HCMVA|UNIQUE short US8 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 PRMKGSPLYV 10
PR G P YV
Sbjct: 38 PRQHGEPNYV 47
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 4 KGSPLY 9
KGSPL+
Sbjct: 654 KGSPLF 659
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 4 KGSPLY 9
KGSPL+
Sbjct: 654 KGSPLF 659
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 5 GSPLY 9
GSPLY
Sbjct: 328 GSPLY 332
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 5 GSPLY 9
GSPLY
Sbjct: 328 GSPLY 332
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 5 GSPLY 9
GSPLY
Sbjct: 328 GSPLY 332
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 5 GSPLY 9
GSPLY
Sbjct: 328 GSPLY 332
>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)
Query: 1 PRMKGSPLY 9
PR G P+Y
Sbjct: 453 PRSAGEPVY 461
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 4 KGSPLY 9
KGSPL+
Sbjct: 654 KGSPLF 659
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 4 KGSPLY 9
KGSPL+
Sbjct: 654 KGSPLF 659
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 GSPLYV 10
G+PLYV
Sbjct: 267 GNPLYV 272
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 PRMKGSPL 8
P+M G P+
Sbjct: 1019 PKMYGGPI 1026
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 GSPLYV 10
G+PLYV
Sbjct: 267 GNPLYV 272
>sp|SHDAG_HDVTW|SMALL delta antigen|Hepatitis delta virus genotype II
Query: 1 PRMKGSP 7
PRM+G P
Sbjct: 169 PRMEGVP 175
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 PRMKGSP 7
PR+KG P
Sbjct: 1240 PRVKGGP 1246
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 PRMKGSPL 8
PR++G P+
Sbjct: 338 PRLQGLPV 345
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 PRMKGSPL 8
PR++G P+
Sbjct: 338 PRLQGLPV 345
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PRMKGSPLY 9
PR+ G P +
Sbjct: 2001 PRLPGVPFF 2009
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PRMKGSPLY 9
PR+ G P +
Sbjct: 2001 PRLPGVPFF 2009
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PRMKGSPLY 9
PR+ G P +
Sbjct: 2001 PRLPGVPFF 2009
>sp|LHDAG_HDVTW|LARGE delta antigen|Hepatitis delta virus genotype II
Query: 1 PRMKGSP 7
PRM+G P
Sbjct: 169 PRMEGVP 175
48|SequenceR|245|236|VELSRPRMKG
>sp|PG176_VAR67|PROTEIN OPG176|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 ELSRPR 7
ELSRPR
Sbjct: 196 ELSRPR 201
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 4 SRPRMKG 10
+RP++KG
Sbjct: 233 ARPKVKG 239
49|SequenceR|250|241|GTSITVELSR
>sp|SH_HRSVA|SMALL hydrophobic protein|Human respiratory syncytial virus A
Query: 2 TSITVELS 9
TSIT+E S
Sbjct: 4 TSITIEFS 11
>sp|SH_HRSS2|SMALL hydrophobic protein|Human respiratory syncytial virus A
Query: 2 TSITVELS 9
TSIT+E S
Sbjct: 4 TSITIEFS 11
>sp|SH_HRSV|SMALL hydrophobic protein|Human respiratory syncytial virus
Query: 2 TSITVELS 9
TSIT+E S
Sbjct: 4 TSITIEFS 11
>sp|VE4_HPV6C|PROBABLE protein E4|Human papillomavirus type 6c
Query: 1 GTSITVEL 8
GT++TV+L
Sbjct: 99 GTTVTVQL 106
>sp|VE4_HPV6B|PROTEIN E4|Human papillomavirus type 6b
Query: 1 GTSITVEL 8
GT++TV+L
Sbjct: 82 GTTVTVQL 89
>sp|VE4_HPV13|PROTEIN E4|Human papillomavirus 13
Query: 1 GTSITVEL 8
GT++TV+L
Sbjct: 91 GTTVTVQL 98
>sp|VE4_HPV6A|PROTEIN E4|Human papillomavirus type 6a
Query: 1 GTSITVEL 8
GT++TV+L
Sbjct: 82 GTTVTVQL 89
>sp|VE4_HPV11|PROTEIN E4|Human papillomavirus 11
Query: 1 GTSITVEL 8
GT++TV+L
Sbjct: 81 GTTVTVQL 88
50|SequenceR|255|246|APAKEGTSIT
>sp|E4OR1_ADE09|E4-ORF1 adenovirus D serotype 9
Query: 1 APAKEGTS 8
AP +EGTS
Sbjct: 16 APVQEGTS 23
>sp|UL11P_HCMVA|PROTEIN UL11|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PAKEGTSIT 10
PAK GT++T
Sbjct: 36 PAKVGTNVT 44
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 3 AKEGTSIT 10
AKEG SIT
Sbjct: 108 AKEGISIT 115
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 3 AKEGTSIT 10
AKEG SIT
Sbjct: 108 AKEGISIT 115
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 KEGTSIT 10
KEG+S+T
Sbjct: 4808 KEGSSVT 4814
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 KEGTSIT 10
KEG SIT
Sbjct: 109 KEGISIT 115
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 4 KEGTSIT 10
KEG SIT
Sbjct: 101 KEGISIT 107
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 4 KEGTSIT 10
KEG SIT
Sbjct: 109 KEGISIT 115
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 4 KEGTSIT 10
KEG SIT
Sbjct: 109 KEGISIT 115
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 4 KEGTSIT 10
KEG SIT
Sbjct: 109 KEGISIT 115
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 4 KEGTSIT 10
KEG SIT
Sbjct: 109 KEGISIT 115
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 4 KEGTSIT 10
KEG SIT
Sbjct: 109 KEGISIT 115
>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40
Query: 1 APAKEGTSI 9
AP EGT I
Sbjct: 224 APGPEGTII 232
>sp|CEP1_HHV2H|CYTOPLASMIC envelopment protein 1|Human herpesvirus 2 (strain HG52)
Query: 2 PAKEGTS 8
PA EGT+
Sbjct: 6 PADEGTA 12
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PAKEGT 7
PA EGT
Sbjct: 729 PANEGT 734
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PAKEGT 7
PA EGT
Sbjct: 721 PANEGT 726
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 2 PAKEGTSI 9
PA GTSI
Sbjct: 986 PALAGTSI 993
51|SequenceR|260|251|LIEPNAPAKE
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 IEPNAPA 8
I PNAPA
Sbjct: 461 ISPNAPA 467
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 IEPNAPA 8
I PNAP+
Sbjct: 463 ITPNAPS 469
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 IEPNAPA 8
I PNAP+
Sbjct: 463 ITPNAPS 469
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 2 IEPNAP 7
I+PNAP
Sbjct: 373 IDPNAP 378
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 IEPNAPA 8
I PN+PA
Sbjct: 462 ITPNSPA 468
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 LIEPNAPAKE 10
LI P P KE
Sbjct: 2119 LIHPTMPMKE 2128
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 LIEPNAPAKE 10
LI P P KE
Sbjct: 2119 LIHPTMPMKE 2128
>sp|PG097_VACCC|PROTEIN OPG097|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 IEPNAPAKE 10
++PN P K+
Sbjct: 48 LQPNQPPKQ 56
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 LIEPNAPAKE 10
LI P P KE
Sbjct: 2119 LIHPTMPMKE 2128
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 2 IEPNAP 7
I+PNAP
Sbjct: 373 IDPNAP 378
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 1 LIEPNAPAKE 10
+I+P PA E
Sbjct: 13 IIQPKLPANE 22
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 LIEPNAPAKE 10
LIEPN +++
Sbjct: 107 LIEPNVTSQQ 116
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 IEPNAPA 8
+ PNAP+
Sbjct: 463 VTPNAPS 469
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 IEPNAPA 8
+ PNAP+
Sbjct: 463 VTPNAPS 469
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 IEPNAPA 8
+ PNAP+
Sbjct: 463 VTPNAPS 469
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 IEPNAPA 8
+ PNAP+
Sbjct: 391 VTPNAPS 397
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 5 NAPAKE 10
NAPAKE
Sbjct: 425 NAPAKE 430
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 IEPNAPA 8
++P APA
Sbjct: 2208 VQPTAPA 2214
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 IEPNAPA 8
++P APA
Sbjct: 2208 VQPTAPA 2214
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 IEPNAPA 8
+ PNAP+
Sbjct: 463 VTPNAPS 469
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 IEPNAPA 8
+ PNAP+
Sbjct: 463 VTPNAPS 469
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 IEPNAPA 8
+ PNAP+
Sbjct: 463 VTPNAPS 469
>sp|Z_SABVB|RING finger protein Z|Sabia mammarenavirus (isolate
Query: 2 IEPNAPAKE 10
IEP+AP E
Sbjct: 91 IEPSAPPPE 99
>sp|NCAP_PUUME|NUCLEOPROTEIN virus (strain Evo/12CG/93)
Query: 2 IEPNAPAKE 10
I+P PA+E
Sbjct: 251 IKPGTPAQE 259
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 2 IEPNAPA 8
I PN PA
Sbjct: 319 ITPNTPA 325
>sp|TRX2_HHV11|TRIPLEX capsid protein 2|Human herpesvirus 1 (strain 17)
Query: 1 LIEPNAPA 8
LI P APA
Sbjct: 253 LIHPEAPA 260
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 LIEPNAPAKE 10
LI P P KE
Sbjct: 2132 LIHPVMPMKE 2141
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 LIEPNAPAKE 10
LI P P KE
Sbjct: 2132 LIHPVMPMKE 2141
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 LIEPNAPAKE 10
LI P P KE
Sbjct: 2135 LIHPVMPMKE 2144
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 LIEPNAPAKE 10
LI P P KE
Sbjct: 2135 LIHPVMPMKE 2144
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 LIEPNAPAKE 10
LI P P KE
Sbjct: 2120 LIHPVMPMKE 2129
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 3 EPNAPAK 9
EPN PA+
Sbjct: 374 EPNPPAR 380
>sp|NCAP_PUUMB|NUCLEOPROTEIN virus (strain Berkel)
Query: 2 IEPNAPAKE 10
++P PA+E
Sbjct: 208 VKPGTPAQE 216
>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 EPNAPAKE 10
EP AP++E
Sbjct: 454 EPTAPSEE 461
52|SequenceR|265|256|EELTLLIEPN
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 TLLIEPN 10
T+LIEPN
Sbjct: 105 TILIEPN 111
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 5 LLIEPN 10
LL+EPN
Sbjct: 106 LLVEPN 111
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 5 LLIEPN 10
LL+EPN
Sbjct: 106 LLVEPN 111
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 5 LLIEPN 10
LL+EPN
Sbjct: 106 LLVEPN 111
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 5 LLIEPN 10
LL+EPN
Sbjct: 106 LLVEPN 111
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 TLLIEP 9
TLL+EP
Sbjct: 267 TLLVEP 272
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 TLLIEP 9
TLL+EP
Sbjct: 267 TLLVEP 272
53|SequenceR|270|261|NAATKEELTL
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 NAATKEEL 8
NAAT EE+
Sbjct: 485 NAATAEEI 492
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 NAATKEEL 8
NAAT EE+
Sbjct: 485 NAATAEEI 492
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 NAATKEEL 8
NAAT EE+
Sbjct: 485 NAATAEEV 492
54|SequenceR|275|266|TASDLNAATK
***** No hits found ******
55|SequenceR|280|271|RARPETASDL
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RARPETASDL 10
RARPE SD+
Sbjct: 143 RARPEIESDM 152
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RARPETASDL 10
RARPE SD+
Sbjct: 143 RARPEIESDM 152
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RARPETASDL 10
RARPE SD+
Sbjct: 143 RARPEIESDM 152
56|SequenceR|285|276|GDPTPRARPE
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 3 PTPRARPE 10
P+P ARP+
Sbjct: 224 PSPGARPQ 231
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 3 PTPRARPE 10
P+P ARP+
Sbjct: 224 PSPGARPQ 231
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 PTPRARPE 10
P+P ARP+
Sbjct: 224 PSPGARPQ 231
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 DPTPRARP 9
PTP+ARP
Sbjct: 63 QPTPKARP 70
>sp|US9_VZVO|ENVELOPE protein US9|Varicella-zoster virus (strain Oka vaccine)
Query: 4 TPRARP 9
TPRA+P
Sbjct: 21 TPRAQP 26
>sp|US9_VZVD|ENVELOPE protein US9|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 TPRARP 9
TPRA+P
Sbjct: 21 TPRAQP 26
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 GDPTPRARP 9
PTPRA P
Sbjct: 1005 NSPTPRANP 1013
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 PTPRARPE 10
P P ARPE
Sbjct: 234 PLPTARPE 241
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 3 PTPRARPE 10
P+P RP+
Sbjct: 224 PSPGTRPQ 231
>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /
Query: 4 TPRARPE 10
TP RPE
Sbjct: 164 TPNPRPE 170
>sp|VC17_VACCC|ANKYRIN repeat protein C17/B23|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 TPRARPE 10
TP RPE
Sbjct: 178 TPNPRPE 184
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 PTPRARPE 10
P P ARPE
Sbjct: 234 PLPTARPE 241
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 2 DPTPRARP 9
DP P RP
Sbjct: 240 DPPPCKRP 247
>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GDPTPRARPE 10
G+P ARP+
Sbjct: 248 GEPRTPARPQ 257
>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GDPTPRARPE 10
G+P ARP+
Sbjct: 248 GEPRTPARPQ 257
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 2 DPTPRAR 8
+PTPR R
Sbjct: 63 NPTPRRR 69
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 2 DPTPRARP 9
DPTP P
Sbjct: 251 DPTPTTPP 258
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 DPTPRARPE 10
P P+ARP
Sbjct: 63 QPIPKARPS 71
>sp|CORE5_ADE02|CORE-CAPSID bridging protein|Human adenovirus C serotype 2
Query: 1 GDPTPRARP 9
G+PTP +P
Sbjct: 135 GNPTPSLKP 143
>sp|CORE5_ADE05|CORE-CAPSID bridging protein|Human adenovirus C serotype 5
Query: 1 GDPTPRARP 9
G+PTP +P
Sbjct: 134 GNPTPSLKP 142
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 GDPTPRARP 9
G P PRA P
Sbjct: 428 GHPEPRAFP 436
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 GDPTPRARP 9
G P PRA P
Sbjct: 428 GHPDPRAFP 436
>sp|NSS_UUKS|NON-STRUCTURAL protein NS-S|Uukuniemi virus (strain S23) (UUKV)
Query: 1 GDPTPRAR 8
GD PR R
Sbjct: 128 GDQNPRLR 135
57|SequenceR|290|281|DASAGGDPTP
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 1 DASAGGDPTP 10
D +A GDPTP
Sbjct: 286 DLAASGDPTP 295
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DASAGGDP 8
D S+GGDP
Sbjct: 365 DRSSGGDP 372
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DASAGGDP 8
++S+GGDP
Sbjct: 364 NSSSGGDP 371
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ASAGGDP 8
+S+GGDP
Sbjct: 374 SSSGGDP 380
>sp|UL74A_HCMVM|UNCHARACTERIZED protein UL74A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 GGDPTP 10
GGDP P
Sbjct: 6 GGDPAP 11
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DASAGGDP 8
+ S+GGDP
Sbjct: 357 NPSSGGDP 364
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 1 DASAGGDP 8
+ S+GGDP
Sbjct: 355 NQSSGGDP 362
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DASAGGDP 8
+ S+GGDP
Sbjct: 365 NQSSGGDP 372
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DASAGGDP 8
+ S+GGDP
Sbjct: 367 NQSSGGDP 374
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DASAGGDP 8
+ S+GGDP
Sbjct: 371 NQSSGGDP 378
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DASAGGDP 8
+ S+GGDP
Sbjct: 362 NQSSGGDP 369
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DASAGGDP 8
+ S+GGDP
Sbjct: 364 NQSSGGDP 371
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SAGGDP 8
S+GGDP
Sbjct: 362 SSGGDP 367
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SAGGDP 8
S+GGDP
Sbjct: 358 SSGGDP 363
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SAGGDP 8
S+GGDP
Sbjct: 362 SSGGDP 367
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SAGGDP 8
S+GGDP
Sbjct: 362 SSGGDP 367
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SAGGDP 8
S+GGDP
Sbjct: 363 SSGGDP 368
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SAGGDP 8
S+GGDP
Sbjct: 360 SSGGDP 365
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SAGGDP 8
S+GGDP
Sbjct: 360 SSGGDP 365
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SAGGDP 8
S+GGDP
Sbjct: 362 SSGGDP 367
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SAGGDP 8
S+GGDP
Sbjct: 360 SSGGDP 365
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SAGGDP 8
S+GGDP
Sbjct: 374 SSGGDP 379
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SAGGDP 8
S+GGDP
Sbjct: 364 SSGGDP 369
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SAGGDP 8
S+GGDP
Sbjct: 364 SSGGDP 369
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SAGGDP 8
S+GGDP
Sbjct: 362 SSGGDP 367
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SAGGDP 8
S+GGDP
Sbjct: 369 SSGGDP 374
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SAGGDP 8
S+GGDP
Sbjct: 362 SSGGDP 367
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SAGGDP 8
S+GGDP
Sbjct: 364 SSGGDP 369
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SAGGDP 8
S+GGDP
Sbjct: 364 SSGGDP 369
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SAGGDP 8
S+GGDP
Sbjct: 369 SSGGDP 374
>sp|NCAP_PUUMP|NUCLEOPROTEIN virus (strain P360)
Query: 1 DASAGGDPT 9
D +A GDPT
Sbjct: 290 DYAASGDPT 298
>sp|NCAP_PUUMK|NUCLEOPROTEIN virus (strain K27)
Query: 1 DASAGGDPT 9
D +A GDPT
Sbjct: 290 DYAASGDPT 298
>sp|NCAP_PUUMS|NUCLEOPROTEIN virus (strain Sotkamo/V-2969/81)
Query: 1 DASAGGDPT 9
D +A GDPT
Sbjct: 290 DYAASGDPT 298
>sp|NCAP_PUUMU|NUCLEOPROTEIN virus (strain Udmurtia/894CG/91)
Query: 1 DASAGGDPT 9
D +A GDPT
Sbjct: 290 DYAASGDPT 298
>sp|NCAP_PUUMB|NUCLEOPROTEIN virus (strain Berkel)
Query: 1 DASAGGDPT 9
D +A GDPT
Sbjct: 247 DYAASGDPT 255
>sp|NCAP_PUUMG|NUCLEOPROTEIN virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 DASAGGDPT 9
D +A GDPT
Sbjct: 290 DYAASGDPT 298
>sp|NCAP_PUUME|NUCLEOPROTEIN virus (strain Evo/12CG/93)
Query: 1 DASAGGDPT 9
D +A GDPT
Sbjct: 290 DYAASGDPT 298
>sp|TAT_HV1BN|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 ASAGGDPT 9
+ AGGDPT
Sbjct: 18 SQAGGDPT 25
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 2 ASAGGDPTP 10
A GG+P P
Sbjct: 505 AGTGGEPNP 513
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 AGGDP 8
AGGDP
Sbjct: 375 AGGDP 379
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 5 GGDPTP 10
GG PTP
Sbjct: 386 GGKPTP 391
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DASAGGDPTP 10
D+S GG P
Sbjct: 666 DSSQGGQSVP 675
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DASAGGDPTP 10
D+S GG P
Sbjct: 666 DSSQGGQSVP 675
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 SAGGDP 8
SAG DP
Sbjct: 375 SAGSDP 380
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 4 AGGDPTP 10
AGGDP P
Sbjct: 1933 AGGDPGP 1939
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 DASAGGDPTP 10
DAS GG P
Sbjct: 1755 DASTGGLTLP 1764
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 ASAGGDPTP 10
S+G PTP
Sbjct: 36 GSSGNTPTP 44
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 ASAGGDPTP 10
S+G PTP
Sbjct: 36 GSSGNTPTP 44
>sp|VL2_HPV22|MINOR capsid protein L2|Human papillomavirus 22
Query: 1 DASAGGDPTP 10
D+SAG D P
Sbjct: 122 DSSAGADLLP 131
>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5
Query: 1 DASAGGDPTP 10
DA+A GD P
Sbjct: 42 DAAADGDYEP 51
58|SequenceR|295|286|PGEKLDASAG
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 1 PGEKLDA 7
PGE++DA
Sbjct: 274 PGEQIDA 280
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 1 PGEKLDASAG 10
P +KL AS+G
Sbjct: 3 PNQKLFASSG 12
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 1 PGEKLDASAG 10
P +KL AS+G
Sbjct: 3 PNQKLFASSG 12
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GEKLDA 7
GEKLDA
Sbjct: 10 GEKLDA 15
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 PGEKLDASAG 10
P KLD +AG
Sbjct: 294 PFAKLDYAAG 303
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus
Query: 1 PGEKLDASAG 10
PG +ASAG
Sbjct: 59 PGGDKEASAG 68
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus
Query: 1 PGEKLDASAG 10
PG +ASAG
Sbjct: 59 PGGDKEASAG 68
>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)
Query: 1 PGEKLD 6
PGE+LD
Sbjct: 223 PGERLD 228
>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)
Query: 1 PGEKLD 6
PGE+LD
Sbjct: 223 PGERLD 228
>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)
Query: 1 PGEKLD 6
PGE+LD
Sbjct: 223 PGERLD 228
>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human
Query: 1 PGEKLD 6
PGE+LD
Sbjct: 223 PGERLD 228
>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)
Query: 1 PGEKLD 6
PGE+LD
Sbjct: 223 PGERLD 228
>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)
Query: 1 PGEKLD 6
PGE+LD
Sbjct: 223 PGERLD 228
>sp|CFLA_MCV1|VIRAL CASP8 and FADD-like apoptosis|Molluscum contagiosum virus subtype 1
Query: 2 GEKLDAS 8
GE+LD+S
Sbjct: 104 GEELDSS 110
59|SequenceR|300|291|HEPNGPGEKL
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 HEPNGPGEKL 10
H+PN PGE L
Sbjct: 194 HQPNPPGEGL 203
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 HEPNGPGEKL 10
H+PN PGE L
Sbjct: 194 HQPNPPGEGL 203
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 PNGPGEKL 10
PN PGE L
Sbjct: 2072 PNNPGEPL 2079
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 2 EPNGP 6
EPNGP
Sbjct: 774 EPNGP 778
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 2 EPNGP 6
EPNGP
Sbjct: 774 EPNGP 778
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 EPNGPGE 8
+P+GPGE
Sbjct: 1270 KPDGPGE 1276
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 HEPNGPGEKL 10
H P+GP + L
Sbjct: 3491 HAPHGPFDAL 3500
Query: 3 PNGPGEK 9
PNGP K
Sbjct: 3875 PNGPQVK 3881
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 HEPNGPGEKL 10
H P+GP + L
Sbjct: 3491 HAPHGPFDAL 3500
Query: 3 PNGPGEK 9
PNGP K
Sbjct: 3875 PNGPQVK 3881
>sp|PHOSP_RABVB|PHOSPHOPROTEIN virus (strain silver-haired bat-associated)
Query: 2 EPNGPGE 8
+P+GPGE
Sbjct: 62 KPSGPGE 68
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 4 NGPGEKL 10
NGPG +L
Sbjct: 610 NGPGPEL 616
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 5 GPGEKL 10
GPG+KL
Sbjct: 404 GPGKKL 409
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 HEPNGPGE 8
H P G GE
Sbjct: 1234 HAPTGSGE 1241
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 2 EPNGP 6
+PNGP
Sbjct: 774 DPNGP 778
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 EPNGPGEKL 10
EP+GP +L
Sbjct: 1644 EPDGPTPEL 1652
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 EPNGPGEKL 10
EP+GP +L
Sbjct: 1644 EPDGPTPEL 1652
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 EPNGPGEKL 10
EP+GP +L
Sbjct: 1644 EPDGPTPEL 1652
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 EPNGPGEKL 10
EP+GP +L
Sbjct: 1644 EPDGPTPEL 1652
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 EPNGPGEKL 10
EP+GP +L
Sbjct: 1644 EPDGPTPEL 1652
>sp|K1_HHV8P|PROTEIN K1|Human herpesvirus 8 type P
Query: 1 HEPNGPGEKL 10
H PNG E +
Sbjct: 128 HLPNGQNETV 137
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 EPNGPGE 8
+P GPG+
Sbjct: 4 KPGGPGK 10
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 EPNGPGE 8
+P GPG+
Sbjct: 4 KPGGPGK 10
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 3 PNGPGE 8
P GPGE
Sbjct: 565 PAGPGE 570
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 EPNGPGE 8
+P GPG+
Sbjct: 4 KPGGPGK 10
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 EPNGPGE 8
+P GPG+
Sbjct: 4 KPGGPGK 10
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 EPNGPGE 8
+P GPG+
Sbjct: 4 KPGGPGK 10
>sp|VE6_HPV43|PROTEIN E6|Human papillomavirus 43
Query: 1 HEPNGPGEKL 10
H+P P EK+
Sbjct: 108 HKPLSPVEKV 117
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 EPNGPGE 8
+P GPG+
Sbjct: 4 KPGGPGK 10
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 EPNGPGE 8
+P GPG+
Sbjct: 4 KPGGPGK 10
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 EPNGPGE 8
+P GPG+
Sbjct: 4 KPGGPGK 10
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 EPNGPGE 8
+P GPG+
Sbjct: 4 KPGGPGK 10
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 EPNGPGE 8
+P GPG+
Sbjct: 4 KPGGPGK 10
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 EPNGPGE 8
+P GPG+
Sbjct: 4 KPGGPGK 10
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 PNGPGEK 9
PN PG++
Sbjct: 1966 PNKPGDE 1972
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 PNGPGEK 9
PN PG++
Sbjct: 1966 PNKPGDE 1972
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 EPNGPGE 8
+P GPG+
Sbjct: 4 KPGGPGK 10
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 PNGPGEK 9
PN PG++
Sbjct: 1962 PNKPGDE 1968
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 2 EPNGPG 7
EP GPG
Sbjct: 258 EPAGPG 263
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 3 PNGPGEK 9
PNG G K
Sbjct: 80 PNGAGNK 86
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 EPNGPG 7
+P GPG
Sbjct: 4 KPGGPG 9
>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 2 EPNGPG 7
EP+GPG
Sbjct: 261 EPSGPG 266
>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 2 EPNGPG 7
EP+GPG
Sbjct: 261 EPSGPG 266
>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 2 EPNGPG 7
EP+GPG
Sbjct: 261 EPSGPG 266
>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 2 EPNGPG 7
EP+GPG
Sbjct: 261 EPSGPG 266
>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)
Query: 2 EPNGPG 7
EP+GPG
Sbjct: 261 EPSGPG 266
>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)
Query: 2 EPNGPG 7
EP+GPG
Sbjct: 261 EPSGPG 266
>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 2 EPNGPG 7
EP+GPG
Sbjct: 261 EPSGPG 266
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 5 GPGEKL 10
GPG+K+
Sbjct: 548 GPGDKI 553
60|SequenceR|305|296|RGTVSHEPNG
>sp|VP40_EBOSU|MATRIX protein VP40|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 5 SHEPNG 10
SH PNG
Sbjct: 63 SHTPNG 68
>sp|UNG_VACCC|URACIL-DNA glycosylase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 TVSHEP 8
TVSH P
Sbjct: 5 TVSHAP 10
>sp|UNG_VACCA|URACIL-DNA glycosylase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 TVSHEP 8
TVSH P
Sbjct: 5 TVSHAP 10
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 1 RGTVSHEPN 9
R +H+PN
Sbjct: 373 RAVTTHDPN 381
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 4 VSHEPNG 10
+SHEP+
Sbjct: 228 ISHEPSA 234
>sp|UNG_VAR67|URACIL-DNA glycosylase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 TVSHEP 8
TVSH P
Sbjct: 5 TVSHAP 10
>sp|UNG_VARV|URACIL-DNA glycosylase|Variola virus
Query: 3 TVSHEP 8
TVSH P
Sbjct: 5 TVSHAP 10
>sp|VU84_HHV7J|PROTEIN U84|Human herpesvirus 7 (strain JI)
Query: 1 RGTVSH 6
RGTV H
Sbjct: 212 RGTVPH 217
>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4
Query: 1 RGTVSHEP 8
RG+ SH P
Sbjct: 21 RGSASHPP 28
>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains
Query: 5 SHEPNG 10
SHE NG
Sbjct: 11 SHEENG 16
>sp|VU51_HHV6Z|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6B (strain Z29)
Query: 2 GTVSHEP 8
GT++H P
Sbjct: 214 GTIAHLP 220
>sp|VU51_HHV6U|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6A (strain
Query: 2 GTVSHEP 8
GT++H P
Sbjct: 214 GTIAHLP 220
>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain
Query: 5 SHEPNG 10
SHE NG
Sbjct: 11 SHEENG 16
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SHEPNG 10
+HEP+G
Sbjct: 76 NHEPSG 81
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SHEPNG 10
+HEP+G
Sbjct: 76 NHEPSG 81
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SHEPNG 10
+HEP+G
Sbjct: 76 NHEPSG 81
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 GTVSHEPNG 10
GTV EP+G
Sbjct: 253 GTVGVEPSG 261
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 2 GTVSHEPNG 10
GTV EP+G
Sbjct: 253 GTVGVEPSG 261
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 GTVSHEPNG 10
GTV EP+G
Sbjct: 253 GTVGVEPSG 261
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 GTVSHEPNG 10
GTV EP+G
Sbjct: 253 GTVGVEPSG 261
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 GTVSHEPNG 10
GTV EP+G
Sbjct: 253 GTVGVEPSG 261
>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GTVSH 6
GTVSH
Sbjct: 118 GTVSH 122
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SHEPNG 10
+HEP+G
Sbjct: 76 NHEPSG 81
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 GTVSHEPNG 10
GTV EP+G
Sbjct: 253 GTVGVEPSG 261
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 GTVSHEPNG 10
GTV EP+G
Sbjct: 253 GTVGVEPSG 261
61|SequenceR|310|301|ATDPPRGTVS
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 DPPRGTVS 10
DPP+GT S
Sbjct: 488 DPPKGTGS 495
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 DPPRGTVS 10
DPP+GT S
Sbjct: 488 DPPKGTGS 495
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 DPPRGTVS 10
DPP+GT S
Sbjct: 488 DPPKGTGS 495
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 ATDPPRGTV 9
A PPRGTV
Sbjct: 80 AHRPPRGTV 88
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 ATDPPRGTV 9
A PPRGTV
Sbjct: 80 AHRPPRGTV 88
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 4 PPRGTVS 10
PPRG+VS
Sbjct: 733 PPRGSVS 739
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 4 PPRGTVS 10
PPRG+VS
Sbjct: 717 PPRGSVS 723
>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)
Query: 4 PPRGTV 9
PP+GT+
Sbjct: 54 PPKGTI 59
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 ATDPPRGT 8
A DPP GT
Sbjct: 2870 AKDPPAGT 2877
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 ATDPPRGT 8
A DPP GT
Sbjct: 2870 AKDPPAGT 2877
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 ATDPPRGT 8
A DPP GT
Sbjct: 2870 AKDPPAGT 2877
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 ATDPPRGT 8
A DPP GT
Sbjct: 2870 AKDPPAGT 2877
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 ATDPPRGT 8
A DPP GT
Sbjct: 2870 AKDPPAGT 2877
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 ATDPPRGT 8
A DPP GT
Sbjct: 2871 AKDPPAGT 2878
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 ATDPPRGT 8
A DPP GT
Sbjct: 2871 AKDPPAGT 2878
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 ATDPPRGT 8
A DPP GT
Sbjct: 2871 AKDPPAGT 2878
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 ATDPPRGT 8
A DPP GT
Sbjct: 2870 AKDPPAGT 2877
>sp|VP7_ROTGI|OUTER capsid glycoprotein VP7|Rotavirus B (isolate RVB/Rat/United
Query: 3 DPPRGTVS 10
D P GTVS
Sbjct: 203 DAPLGTVS 210
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 TDPPRG 7
T+PPRG
Sbjct: 969 TNPPRG 974
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 PPRGTVS 10
PPRG V+
Sbjct: 225 PPRGNVN 231
>sp|UL62_HCMVA|UNCHARACTERIZED protein UL62|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DPPRG 7
DPPRG
Sbjct: 157 DPPRG 161
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 3 DPPRGT 8
D PRGT
Sbjct: 19 DEPRGT 24
>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 PPRGTVS 10
PPRG V+
Sbjct: 225 PPRGNVN 231
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 PPRGTVS 10
PPRG V+
Sbjct: 225 PPRGNVN 231
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 ATDPPRGT 8
+T PPRG+
Sbjct: 541 STRPPRGS 548
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 1 ATDPPRGT 8
+T PPRG+
Sbjct: 543 STRPPRGS 550
>sp|VP22_HHV2H|TEGUMENT protein VP22|Human herpesvirus 2 (strain HG52)
Query: 1 ATDPPRG 7
ATDP RG
Sbjct: 136 ATDPARG 142
>sp|J1I_HCMVA|UNCHARACTERIZED protein HKRFX|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DPPRG 7
DPPRG
Sbjct: 102 DPPRG 106
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 3 DPPRGTV 9
DPP G V
Sbjct: 583 DPPAGWV 589
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 1 ATDPPRGTVS 10
A+DP RG ++
Sbjct: 58 ASDPQRGRLA 67
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 3 DPPRGTVS 10
DPP+G+++
Sbjct: 470 DPPQGSLA 477
>sp|J1L_HCMVA|UNCHARACTERIZED protein J1L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DPPRG 7
DPPRG
Sbjct: 305 DPPRG 309
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ATDPPRGTVS 10
+ DPP G+ S
Sbjct: 966 SIDPPAGSTS 975
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ATDPPRGTVS 10
+ DPP G+ S
Sbjct: 966 SIDPPAGSTS 975
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 ATDPPRG 7
+T PPRG
Sbjct: 543 STRPPRG 549
>sp|J1S_HCMVA|UNCHARACTERIZED protein J1S|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DPPRG 7
DPPRG
Sbjct: 188 DPPRG 192
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 ATDPPRG 7
+T PPRG
Sbjct: 543 STRPPRG 549
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 ATDPPRG 7
+T PPRG
Sbjct: 543 STRPPRG 549
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 1 ATDPPRG 7
+T PPRG
Sbjct: 543 STRPPRG 549
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 PRGTV 9
PRGTV
Sbjct: 3076 PRGTV 3080
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 PRGTV 9
PRGTV
Sbjct: 3076 PRGTV 3080
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 5 PRGTV 9
PRGTV
Sbjct: 3076 PRGTV 3080
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 PRGTV 9
PRGTV
Sbjct: 3076 PRGTV 3080
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 ATDPPRGTVS 10
A DPP G S
Sbjct: 604 ARDPPPGAGS 613
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ATDPPRGTVS 10
A DPP G S
Sbjct: 604 ARDPPPGAGS 613
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 PRGTV 9
PRGTV
Sbjct: 3076 PRGTV 3080
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 ATDPPRGT 8
A +PP+GT
Sbjct: 2852 APEPPQGT 2859
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 PRGTV 9
PRGTV
Sbjct: 3076 PRGTV 3080
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 PRGTV 9
PRGTV
Sbjct: 3073 PRGTV 3077
62|SequenceR|315|306|CRPSAATDPP
>sp|TEG7_HHV7J|TEGUMENT protein UL51 homolog|Human herpesvirus 7 (strain JI)
Query: 3 PSAATDPP 10
P+A TDPP
Sbjct: 180 PNAVTDPP 187
>sp|M2_I01A2|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 CRPSAATDP 9
CR S ++DP
Sbjct: 20 CRCSGSSDP 28
>sp|M2_I02A5|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 CRPSAATDP 9
CR S ++DP
Sbjct: 17 CRCSGSSDP 25
>sp|M2_I01A1|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 CRPSAATDP 9
CR S ++DP
Sbjct: 17 CRCSGSSDP 25
>sp|M2_I01A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 CRPSAATDP 9
CR S ++DP
Sbjct: 17 CRCSGSSDP 25
>sp|M2_I00A0|MATRIX protein 2|Influenza A virus (strain A/Duck/Hong
Query: 1 CRPSAATDP 9
CR S ++DP
Sbjct: 17 CRCSGSSDP 25
>sp|M2_I97A1|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 1 CRPSAATDP 9
CR S ++DP
Sbjct: 17 CRCSDSSDP 25
>sp|M2_I97A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 CRPSAATDP 9
CR S ++DP
Sbjct: 17 CRCSDSSDP 25
>sp|M2_I03A0|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 1 CRPSAATDP 9
CR S ++DP
Sbjct: 17 CRCSDSSDP 25
>sp|M2_I02A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 CRPSAATDP 9
CR S ++DP
Sbjct: 17 CRCSDSSDP 25
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 PSAATDP 9
PSA +DP
Sbjct: 374 PSAGSDP 380
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 1 CRPSAATDP 9
C PSAA P
Sbjct: 331 CTPSAAYMP 339
>sp|M2_I02A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 CRPSAATDP 9
CR S ++DP
Sbjct: 17 CRCSDSSDP 25
>sp|M2_I02A6|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 CRPSAATDP 9
CR S ++DP
Sbjct: 17 CRCSDSSDP 25
>sp|M2_I59A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 CRPSAATDP 9
CR S ++DP
Sbjct: 17 CRCSDSSDP 25
>sp|M2_I05A1|MATRIX protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 CRPSAATDP 9
CR S ++DP
Sbjct: 17 CRCSDSSDP 25
>sp|M2_I03A1|MATRIX protein 2|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 CRPSAATDP 9
CR S ++DP
Sbjct: 17 CRCSDSSDP 25
>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|M2_I36A0|MATRIX protein 2|Influenza A virus (strain A/Henry/1936
Query: 1 CRPSAATDP 9
CR + ++DP
Sbjct: 17 CRCNGSSDP 25
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|MATRX_RABVN|MATRIX protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 RPSAATDPP 10
+PS A+ PP
Sbjct: 18 KPSPASAPP 26
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|M2_I02A7|MATRIX protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 CRPSAATDP 9
CR S ++DP
Sbjct: 15 CRCSDSSDP 23
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|M2_I34A1|MATRIX protein 2|Influenza A virus (strain A/Puerto
Query: 1 CRPSAATDP 9
CR + ++DP
Sbjct: 17 CRCNGSSDP 25
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|M2_I000X|MATRIX protein 2|Influenza A virus (strain A/X-31
Query: 1 CRPSAATDP 9
CR + ++DP
Sbjct: 17 CRCNGSSDP 25
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 3 PSAATDP 9
P+A TDP
Sbjct: 378 PNAGTDP 384
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|M2_I06A0|MATRIX protein 2|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 CRPSAATDP 9
CR + ++DP
Sbjct: 17 CRCNGSSDP 25
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 PSAATDP 9
P+A TDP
Sbjct: 379 PNAGTDP 385
>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 3 PSAATDP 9
P+A TDP
Sbjct: 378 PNAGTDP 384
>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 RPSAATDPP 10
+PS A+ PP
Sbjct: 18 KPSPASAPP 26
>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968
Query: 3 PSAATDP 9
PSA DP
Sbjct: 83 PSAGKDP 89
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 RPSAATDP 9
+P A +DP
Sbjct: 374 KPGAGSDP 381
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 CRPSAATDP 9
RP+ A DP
Sbjct: 445 VRPTVAADP 453
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CRPSAATDP 9
RP+ A DP
Sbjct: 445 VRPTVAADP 453
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 CRPSAATDP 9
RP+ A DP
Sbjct: 445 VRPTVAADP 453
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 CRPSAATDP 9
CR ++ DP
Sbjct: 467 CRVTSGVDP 475
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 3 PSAATDP 9
P+A TDP
Sbjct: 380 PNAGTDP 386
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 CRPSAATDP 9
CR ++ DP
Sbjct: 467 CRVTSGVDP 475
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 3 PSAATDP 9
PSA+ DP
Sbjct: 282 PSASVDP 288
>sp|M2_I35A3|MATRIX protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 1 CRPSAATDP 9
CR + ++DP
Sbjct: 17 CRCNGSSDP 25
>sp|IR05_HCMVA|UNCHARACTERIZED protein IRL5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RPSAATDPP 10
RP AA PP
Sbjct: 66 RPRAAKSPP 74
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 CRPSAATDP 9
RP+A DP
Sbjct: 2336 LRPAAVIDP 2344
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 3 PSAATDP 9
P+A TDP
Sbjct: 380 PNAETDP 386
63|SequenceR|320|311|GEQAHCRPSA
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 3 QAHCRPS 9
Q HC+P+
Sbjct: 142 QTHCQPT 148
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 GEQAHCRPSA 10
G CRP A
Sbjct: 564 GNSCTCRPQA 573
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 QAHCRPS 9
Q HC+P+
Sbjct: 139 QTHCQPT 145
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 2 EQAHCRPS 9
+ AHC PS
Sbjct: 421 DSAHCAPS 428
>sp|US09_HCMVM|MEMBRANE glycoprotein US9|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 HCRPSA 10
HCRP++
Sbjct: 163 HCRPAS 168
>sp|US09_HCMVA|UNIQUE short US9 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 HCRPSA 10
HCRP++
Sbjct: 163 HCRPAS 168
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 1 GEQAHC 6
GE+A+C
Sbjct: 46 GEKAYC 51
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 1 GEQAHC 6
GE+A+C
Sbjct: 46 GEKAYC 51
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 3 QAHCRPS 9
Q HC P+
Sbjct: 139 QTHCLPT 145
>sp|YVFB_VACCC|UNCHARACTERIZED 8.3 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 QAHCRPSA 10
++ CRPS+
Sbjct: 28 KSQCRPSS 35
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 QAHCRPS 9
Q HC P+
Sbjct: 139 QTHCLPT 145
64|SequenceR|325|316|GDVPDGEQAH
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 GDVPDG 6
GD+PDG
Sbjct: 855 GDLPDG 860
>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)
Query: 1 GDVPDGEQAH 10
G++PDG H
Sbjct: 394 GEIPDGYCVH 403
>sp|CAPSD_HCYV5|CAPSID protein|Human associated cyclovirus 1 (isolate
Query: 2 DVPDGEQAH 10
D P+ QAH
Sbjct: 192 DAPENAQAH 200
>sp|NEF_HV2KR|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 DVPDGEQAH 10
DVP GE+ H
Sbjct: 181 DVPQGEEDH 189
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PDGEQAH 10
PD QAH
Sbjct: 355 PDTRQAH 361
>sp|SPIKE_ADE1A|FIBER protein|Human adenovirus B serotype 11
Query: 1 GDVPDGEQA 9
GD P+G+ +
Sbjct: 299 GDAPEGQTS 307
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 3 VPDGEQAH 10
VP+GE H
Sbjct: 1875 VPEGEGLH 1882
>sp|TEG3_HHV2H|TEGUMENT protein UL14|Human herpesvirus 2 (strain HG52)
Query: 2 DVPDGE 7
D PDGE
Sbjct: 214 DCPDGE 219
>sp|TEG3_HHV11|TEGUMENT protein UL14|Human herpesvirus 1 (strain 17)
Query: 2 DVPDGE 7
D PDGE
Sbjct: 214 DYPDGE 219
65|SequenceR|330|321|DRVCTGDVPD
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 VCTGDVP 9
VCTGD P
Sbjct: 1022 VCTGDCP 1028
Query: 5 TGDVPD 10
+GD+PD
Sbjct: 854 SGDLPD 859
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 16 DRICTG 21
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 9 DRICTG 14
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 16 DRICTG 21
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 9 DRICTG 14
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 9 DRICTG 14
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 16 DRICTG 21
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 16 DRICTG 21
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 16 DRICTG 21
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 16 DRICTG 21
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 6 DRICTG 11
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 9 DRICTG 14
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 9 DRICTG 14
>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 16 DRICTG 21
>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 12 DRICTG 17
>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 13 DRICTG 18
>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 16 DRICTG 21
>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 16 DRICTG 21
>sp|HEMA_INBGL|HEMAGGLUTININ B virus (strain B/GL/1954)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 12 DRICTG 17
>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 16 DRICTG 21
>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 16 DRICTG 21
>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 16 DRICTG 21
>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 16 DRICTG 21
>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 16 DRICTG 21
>sp|HEMA_INBNA|HEMAGGLUTININ B virus (strain B/Nagasaki/1/1987)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 1 DRICTG 6
>sp|HEMA_INBF9|HEMAGGLUTININ B virus (strain B/Finland/151/1990)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 1 DRICTG 6
>sp|HEMA_INBF8|HEMAGGLUTININ B virus (strain B/Finland/150/1990)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 1 DRICTG 6
>sp|HEMA_INBF7|HEMAGGLUTININ B virus (strain B/Finland/149/1990)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 1 DRICTG 6
>sp|HEMA_INBF6|HEMAGGLUTININ B virus (strain B/Finland/148/1990)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 1 DRICTG 6
>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 16 DRICTG 21
>sp|HEMA_INBF5|HEMAGGLUTININ B virus (strain B/Finland/147/1990)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 1 DRICTG 6
>sp|HEMA_INBF4|HEMAGGLUTININ B virus (strain B/Finland/146/1990)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 1 DRICTG 6
>sp|HEMA_INBF3|HEMAGGLUTININ B virus (strain B/Finland/145/1990)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 1 DRICTG 6
>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 16 DRICTG 21
>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 16 DRICTG 21
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 CTGDVPD 10
CTGD P+
Sbjct: 1165 CTGDCPE 1171
>sp|HEMA_INBF2|HEMAGGLUTININ B virus (strain B/Finland/56/1988)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 1 DRICTG 6
>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 8 DRICTG 13
>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 16 DRICTG 21
>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 16 DRICTG 21
>sp|HEMA_INBF1|HEMAGGLUTININ B virus (strain B/Finland/24/1985)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 1 DRICTG 6
>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 1 DRICTG 6
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 3 VCTGDVP 9
+CTG VP
Sbjct: 384 LCTGSVP 390
>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)
Query: 1 DRVCTG 6
DR+CTG
Sbjct: 1 DRICTG 6
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 DRVCTGDV 8
DR CTG++
Sbjct: 654 DRPCTGNL 661
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 DRVCTGD 7
DR CTG+
Sbjct: 654 DRPCTGN 660
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DRVCTGD 7
DR CTG+
Sbjct: 654 DRPCTGN 660
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DRVCTGDVP 9
D +CT D P
Sbjct: 454 DTICTPDEP 462
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 2 RVCTGD 7
++CTGD
Sbjct: 534 KICTGD 539
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 4 CTGDVPD 10
CT D P+
Sbjct: 194 CTSDTPE 200
>sp|NEC2_HHV8P|NUCLEAR egress protein 2|Human herpesvirus 8 type P
Query: 2 RVCTGDV 8
R CT DV
Sbjct: 211 RACTSDV 217
>sp|VME1_CVH22|MEMBRANE protein|Human coronavirus 229E (HCoV-229E)
Query: 4 CTGDV 8
CTGD+
Sbjct: 6 CTGDI 10
>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)
Query: 1 DRVCTGDVPD 10
D++ D+PD
Sbjct: 389 DKIFISDLPD 398
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 RVCTGDVPD 10
R CT D+ D
Sbjct: 1007 RRCTADIRD 1015
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 RVCTGDVPD 10
R CT D+ D
Sbjct: 1029 RRCTADIRD 1037
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 RVCTGDVPD 10
R CT D+ D
Sbjct: 1002 RRCTADIRD 1010
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 3 VCTGD 7
VCTGD
Sbjct: 109 VCTGD 113
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VCTGDVP 9
+CT +VP
Sbjct: 579 ICTTNVP 585
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VCTGDVP 9
+CT +VP
Sbjct: 606 ICTTNVP 612
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VCTGDVP 9
+CT +VP
Sbjct: 597 ICTTNVP 603
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VCTGDVP 9
+CT +VP
Sbjct: 595 ICTTNVP 601
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VCTGDVP 9
+CT +VP
Sbjct: 593 ICTTNVP 599
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VCTGDVP 9
+CT +VP
Sbjct: 600 ICTTNVP 606
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VCTGDVP 9
+CT +VP
Sbjct: 589 ICTTNVP 595
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VCTGDVP 9
+CT +VP
Sbjct: 598 ICTTNVP 604
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VCTGDVP 9
+CT +VP
Sbjct: 589 ICTTNVP 595
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VCTGDVP 9
+CT +VP
Sbjct: 593 ICTTNVP 599
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VCTGDVP 9
+CT +VP
Sbjct: 592 ICTTNVP 598
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 4 CTGDVPD 10
C G+ PD
Sbjct: 286 CFGEAPD 292
>sp|VE2_HPV24|REGULATORY protein E2|Human papillomavirus 24
Query: 4 CTGDVP 9
C GD P
Sbjct: 302 CRGDTP 307
>sp|NEC2_VZVD|NUCLEAR egress protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 RVCTGDVP 9
+ C GD+P
Sbjct: 32 QCCDGDLP 39
66|SequenceR|335|326|PFSCSDRVCT
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 PFSCSDRVC 9
PFSC VC
Sbjct: 1013 PFSCKTNVC 1021
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 PFSCSDRVC 9
PFSC VC
Sbjct: 1013 PFSCKTNVC 1021
>sp|VP7_ROTHB|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 3 SCSDRVC 9
SC+D+VC
Sbjct: 190 SCTDKVC 196
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 1 PFSCSDR 7
PF CS R
Sbjct: 593 PFQCSAR 599
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 13 SNADRICT 20
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 13 SNADRICT 20
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 13 SNADRICT 20
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 13 SNADRICT 20
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 13 SNADRICT 20
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 13 SNADRICT 20
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 6 SNADRICT 13
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 6 SNADRICT 13
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 3 SNADRICT 10
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 6 SNADRICT 13
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 6 SNADRICT 13
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 6 SNADRICT 13
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 SCSDR 7
SCSDR
Sbjct: 1053 SCSDR 1057
>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 9 SNADRICT 16
>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 13 SNADRICT 20
>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 10 SNADRICT 17
>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 13 SNADRICT 20
>sp|HEMA_INBGL|HEMAGGLUTININ B virus (strain B/GL/1954)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 9 SNADRICT 16
>sp|GL_HHV7J|ENVELOPE glycoprotein L|Human herpesvirus 7 (strain JI)
Query: 2 FSCSDRVC 9
+C D VC
Sbjct: 132 LTCRDNVC 139
>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 13 SNADRICT 20
>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 13 SNADRICT 20
>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 13 SNADRICT 20
>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 13 SNADRICT 20
>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)
Query: 4 CSDRVC 9
CS RVC
Sbjct: 483 CSSRVC 488
>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 13 SNADRICT 20
>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 5 SNADRICT 12
>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 13 SNADRICT 20
>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 13 SNADRICT 20
>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 13 SNADRICT 20
>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 13 SNADRICT 20
>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 13 SNADRICT 20
>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong
Query: 3 SCSDRVCT 10
S +DR+CT
Sbjct: 13 SNADRICT 20
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 4 CSDRVC 9
CS RVC
Sbjct: 483 CSSRVC 488
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 4 CSDRVC 9
CS RVC
Sbjct: 482 CSSRVC 487
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 CSDRVC 9
CSD +C
Sbjct: 169 CSDDIC 174
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 1 PFSCSDRVCT 10
PF VCT
Sbjct: 208 PFKSDKTVCT 217
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 4 CSDRVC 9
CSD VC
Sbjct: 219 CSDWVC 224
67|SequenceR|340|331|GSVAEPFSCS
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 1 GSVAEPFSC 9
G+ +EPF C
Sbjct: 626 GNTSEPFRC 634
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 1 GSVAEPFSC 9
G+ +EPF C
Sbjct: 642 GNTSEPFRC 650
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 1 GSVAEPFSC 9
G+ EPF C
Sbjct: 626 GNTGEPFRC 634
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 1 GSVAEPFSC 9
G+ EPF C
Sbjct: 626 GNTGEPFRC 634
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 1 GSVAEPFSC 9
G+ +EPF C
Sbjct: 645 GNPSEPFRC 653
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 VAEPFSCS 10
+A+PF+C+
Sbjct: 210 IADPFNCN 217
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 3 VAEPFSCS 10
+A+PF+C+
Sbjct: 210 IADPFNCN 217
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 2 SVAEPFSCS 10
+ +PFSC+
Sbjct: 263 NTTDPFSCT 271
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 1 GSVAEPFSC 9
G+ +EPF C
Sbjct: 664 GNPSEPFRC 672
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 1 GSVAEPFSCS 10
G PF CS
Sbjct: 588 GESQRPFQCS 597
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 1 GSVAEPFSC 9
G +EPF C
Sbjct: 643 GEPSEPFRC 651
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 4 AEPFSC 9
A PFSC
Sbjct: 1011 ANPFSC 1016
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 1 GSVAEPFSCS 10
G PF CS
Sbjct: 50 GQNPRPFGCS 59
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 3 VAEPFSCS 10
VAE SCS
Sbjct: 1987 VAELLSCS 1994
>sp|ICP27_HHV6U|MRNA export factor ICP27 homolog|Human herpesvirus 6A (strain
Query: 1 GSVAEPFSC 9
G VAE + C
Sbjct: 313 GRVAERYEC 321
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 4 AEPFSCS 10
++P+SC+
Sbjct: 996 SDPYSCN 1002
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 1 GSVAEPFSC 9
G+ A P SC
Sbjct: 304 GNTASPSSC 312
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 3 VAEPFSCS 10
+AEPF+ +
Sbjct: 210 IAEPFNAN 217
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 3 VAEPFSCS 10
+AEPF+ +
Sbjct: 210 IAEPFNAN 217
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 3 VAEPFSCS 10
+AEPF+ +
Sbjct: 210 IAEPFNAN 217
68|SequenceR|345|336|SAQPHGSVAE
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 2 AQPHGSVAE 10
A+P GSV E
Sbjct: 368 AKPSGSVVE 376
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 1 SAQPHGSV 8
SAQ HG V
Sbjct: 469 SAQLHGDV 476
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SAQPHGSV 8
SAQ HG V
Sbjct: 469 SAQLHGDV 476
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 1 SAQPHGSV 8
SAQ HG V
Sbjct: 469 SAQLHGDV 476
>sp|PHOSP_PI2H|PHOSPHOPROTEIN parainfluenza 2 virus (HPIV-2)
Query: 2 AQPHGSVAE 10
A+PHG + +
Sbjct: 105 ARPHGKMTD 113
>sp|V_PI2H|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (HPIV-2)
Query: 2 AQPHGSVAE 10
A+PHG + +
Sbjct: 105 ARPHGKMTD 113
69|SequenceR|350|341|PSRSGSAQPH
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 SRSGSAQPH 10
+R G+ +PH
Sbjct: 443 TRDGAKEPH 451
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 PSRSGSAQP 9
P RSGS +P
Sbjct: 232 PGRSGSIRP 240
>sp|VE2_HPV50|REGULATORY protein E2|Human papillomavirus type 50
Query: 3 RSGSAQP 9
RSGS QP
Sbjct: 233 RSGSGQP 239
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 PSRSGSAQP 9
P R G A+P
Sbjct: 2416 PFREGEAKP 2424
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 PSRSGSAQ 8
PSRSGS +
Sbjct: 239 PSRSGSIR 246
>sp|TAT_HV2ST|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 2 SRSGSAQPH 10
+R+G++QP
Sbjct: 103 TRTGNSQPE 111
70|SequenceR|355|346|CRPCGPSRSG
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 RPCGPSRSG 10
RPCGP +
Sbjct: 419 RPCGPQSAA 427
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 RPCGPSRSG 10
RPCGP +
Sbjct: 420 RPCGPQSAA 428
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 RPCGPSRSG 10
RPCGP +
Sbjct: 419 RPCGPQSAA 427
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PCGPSRSG 10
PCGP+ +G
Sbjct: 446 PCGPNPAG 453
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 CRPCGPSR 8
C P GPSR
Sbjct: 457 CTPDGPSR 464
>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain
Query: 4 CGPSRSG 10
CGP R+G
Sbjct: 294 CGPFRTG 300
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CRPCGPSRSG 10
CR CG R G
Sbjct: 4348 CRVCGFWRDG 4357
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CRPCGPSRSG 10
CR CG R G
Sbjct: 4348 CRVCGFWRDG 4357
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 3 PCGP 6
PCGP
Sbjct: 271 PCGP 274
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 PCGP 6
PCGP
Sbjct: 271 PCGP 274
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 PCGP 6
PCGP
Sbjct: 271 PCGP 274
>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)
Query: 1 CRPCGP 6
C PCGP
Sbjct: 150 CSPCGP 155
>sp|UL17_HCMVM|PROTEIN UL17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PCGPSR 8
PCGP R
Sbjct: 50 PCGPQR 55
>sp|UL17_HCMVA|UNCHARACTERIZED protein UL17|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PCGPSR 8
PCGP R
Sbjct: 50 PCGPQR 55
>sp|UL17_HCMVT|PROTEIN UL17|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 PCGPSR 8
PCGP R
Sbjct: 50 PCGPQR 55
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 RPCGPSRS 9
R CGPS++
Sbjct: 133 RECGPSKT 140
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 RPCGPSRS 9
R CGPS++
Sbjct: 133 RECGPSKT 140
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 RPCGPSRS 9
R CGPS++
Sbjct: 133 RECGPSKT 140
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 4 CGPSRSG 10
CGP R+G
Sbjct: 294 CGPFRTG 300
>sp|YVDB_VACCC|UNCHARACTERIZED 8.5 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PCGPSRSG 10
P GPS G
Sbjct: 21 PIGPSNCG 28
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 PCGPSRS 9
P GPS S
Sbjct: 587 PSGPSNS 593
>sp|VP1_POVKI|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 350)
Query: 1 CRPCGPSR 8
C PC P +
Sbjct: 3 CTPCRPQK 10
>sp|VP1_POVK6|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 60)
Query: 1 CRPCGPSR 8
C PC P +
Sbjct: 3 CTPCRPQK 10
>sp|VP1_POVK3|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 380)
Query: 1 CRPCGPSR 8
C PC P +
Sbjct: 3 CTPCRPQK 10
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 1 CRPCG 5
CR CG
Sbjct: 363 CRVCG 367
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 1 CRPCG 5
CR CG
Sbjct: 363 CRVCG 367
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 1 CRPCG 5
CR CG
Sbjct: 363 CRVCG 367
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 1 CRPCG 5
CR CG
Sbjct: 363 CRVCG 367
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 1 CRPCG 5
CR CG
Sbjct: 363 CRVCG 367
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 CRPCGPSRSG 10
C+ CG R G
Sbjct: 4386 CQVCGFWRDG 4395
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 CRPCGPSRSG 10
C+ CG R G
Sbjct: 4406 CQVCGFWRDG 4415
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 CRPCGPSRSG 10
C+ CG R G
Sbjct: 4436 CQVCGFWRDG 4445
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 CRPCGPSRSG 10
C+ CG R G
Sbjct: 4386 CQVCGFWRDG 4395
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 CRPCGPSRSG 10
C+ CG R G
Sbjct: 4406 CQVCGFWRDG 4415
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 CRPCGPSRSG 10
C+ CG R G
Sbjct: 4436 CQVCGFWRDG 4445
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 RPCGPSR 8
RPC P+R
Sbjct: 76 RPCVPAR 82
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 2 RPCGPSR 8
RPC P+R
Sbjct: 76 RPCVPAR 82
>sp|VE7_HPV60|PROTEIN E7|Human papillomavirus type 60
Query: 1 CRPCG 5
C+PCG
Sbjct: 50 CKPCG 54
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 CRPCGPS 7
CR GPS
Sbjct: 1079 CRDRGPS 1085
71|SequenceR|360|351|EHSDQCRPCG
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 1 EHSDQCRPCG 10
EH D+ PCG
Sbjct: 167 EHWDKAEPCG 176
>sp|UL91_HCMVA|PROTEIN UL91|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EHSDQCRPC 9
E S+ CRPC
Sbjct: 77 ETSNTCRPC 85
>sp|UL91_HCMVM|PROTEIN UL91|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EHSDQCRPC 9
E S+ CRPC
Sbjct: 77 ETSNTCRPC 85
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 1 EHSDQCRPCG 10
EH D+ PC
Sbjct: 168 EHWDKAEPCA 177
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 1 EHSDQCRPC 9
EH D+ PC
Sbjct: 168 EHWDKAEPC 176
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 DQCRPCG 10
D CR CG
Sbjct: 4346 DVCRVCG 4352
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 DQCRPCG 10
D CR CG
Sbjct: 4346 DVCRVCG 4352
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 2 HSDQCRPC 9
HS C PC
Sbjct: 94 HSPGCVPC 101
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 1 EHSDQCRPCG 10
EH D+ PC
Sbjct: 196 EHWDKALPCA 205
>sp|VP35_MABVR|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ravn-87)
Query: 5 QCRPC 9
QC PC
Sbjct: 46 QCSPC 50
>sp|VP35_MABVO|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 5 QCRPC 9
QC PC
Sbjct: 46 QCSPC 50
>sp|VP35_MABVM|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Musoke-80)
Query: 5 QCRPC 9
QC PC
Sbjct: 46 QCSPC 50
>sp|VP35_MABVA|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Angola/2005)
Query: 5 QCRPC 9
QC PC
Sbjct: 46 QCSPC 50
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 1 EHSDQCRPC 9
EH D +PC
Sbjct: 170 EHWDIAKPC 178
>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)
Query: 5 QCRPCG 10
QC PCG
Sbjct: 64 QCTPCG 69
>sp|VP35_MABVP|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Popp-67)
Query: 5 QCRPC 9
QC PC
Sbjct: 46 QCSPC 50
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 1 EHSDQCR 7
EH D CR
Sbjct: 196 EHVDWCR 202
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 1 EHSDQCRPCG 10
EH D+ PC
Sbjct: 176 EHWDKAVPCA 185
>sp|CRMB_CWPXG|SOLUBLE TNF receptor II|Cowpox virus (strain GRI-90 /
Query: 5 QCRPCG 10
QC PCG
Sbjct: 66 QCTPCG 71
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 1 EHSDQCRPC 9
EH D+ PC
Sbjct: 167 EHWDKALPC 175
>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40
Query: 1 EHSDQCRPC 9
E +CRPC
Sbjct: 428 ESKVRCRPC 436
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 1 EHSDQCRPCG 10
EH D+ PC
Sbjct: 167 EHWDKAVPCA 176
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 1 EHSDQCRPCG 10
EH D+ PC
Sbjct: 167 EHWDRALPCA 176
>sp|C22L_VACCC|TRUNCATED CrmB protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 QCRPCG 10
QC PCG
Sbjct: 59 QCTPCG 64
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 EHSDQCRPC 9
EH D+ PC
Sbjct: 169 EHWDRALPC 177
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 1 EHSDQCRPC 9
EH D+ PC
Sbjct: 167 EHWDKAIPC 175
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 EHSDQCRPCG 10
EH D+ PC
Sbjct: 169 EHWDKAIPCA 178
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 1 EHSDQCRP 8
EH CRP
Sbjct: 455 EHMASCRP 462
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 5 QCRPCG 10
+CRP G
Sbjct: 629 ECRPLG 634
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 5 QCRPCG 10
+CRP G
Sbjct: 629 ECRPLG 634
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 5 QCRPCG 10
+CRP G
Sbjct: 629 ECRPLG 634
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 5 QCRPCG 10
+CRP G
Sbjct: 629 ECRPLG 634
>sp|A28_YMTV5|ENVELOPE protein A28 homolog|Yaba monkey tumor virus (strain
Query: 2 HSDQCRPC 9
HSD PC
Sbjct: 116 HSDIYNPC 123
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 5 QCRPCG 10
+CRP G
Sbjct: 629 ECRPLG 634
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 1 EHSDQCRP 8
EH CRP
Sbjct: 455 EHMASCRP 462
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 1 EHSDQCR 7
+H+D CR
Sbjct: 511 DHTDWCR 517
>sp|PG181_VARV|PROTEIN OPG181|Variola virus
Query: 3 SDQCRPC 9
+D+CR C
Sbjct: 245 NDECRCC 251
>sp|PG181_VAR67|PROTEIN OPG181|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 SDQCRPC 9
+D+CR C
Sbjct: 245 NDECRCC 251
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 5 QCRPC 9
QCR C
Sbjct: 2946 QCRTC 2950
>sp|PG181_VACCA|PROTEIN OPG181|Vaccinia virus (strain Ankara) (VACV)
Query: 3 SDQCRPC 9
+D+CR C
Sbjct: 241 NDECRCC 247
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 1 EHSDQCRPC 9
E +CRPC
Sbjct: 445 ETRTRCRPC 453
>sp|PG181_MONPV|PROTEIN OPG181|Monkeypox virus (MPXV)
Query: 3 SDQCRPC 9
+D+CR C
Sbjct: 245 NDECRCC 251
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 1 EHSDQCRPC 9
E +CRPC
Sbjct: 446 ETRTRCRPC 454
>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41
Query: 1 EHSDQCRPC 9
E +CRPC
Sbjct: 424 ELKARCRPC 432
>sp|PG181_VACCC|PROTEIN OPG181|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 SDQCRPC 9
+D+CR C
Sbjct: 245 NDECRCC 251
>sp|CRMB_VARV|CYTOKINE response-modifying protein B|Variola virus
Query: 5 QCRPCG 10
QC PCG
Sbjct: 64 QCTPCG 69
>sp|CRMB_VAR67|CYTOKINE response-modifying protein B|Variola virus (isolate
Query: 5 QCRPCG 10
QC PCG
Sbjct: 64 QCTPCG 69
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 DQCRPCG 10
+ CR CG
Sbjct: 811 EACRLCG 817
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 6 CRPCG 10
CR CG
Sbjct: 363 CRVCG 367
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 6 CRPCG 10
CR CG
Sbjct: 363 CRVCG 367
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 6 CRPCG 10
CR CG
Sbjct: 363 CRVCG 367
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 6 CRPCG 10
CR CG
Sbjct: 363 CRVCG 367
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 6 CRPCG 10
CR CG
Sbjct: 363 CRVCG 367
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 EHSDQCRPC 9
EH +CRP
Sbjct: 270 EHFARCRPL 278
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 EHSDQCRPC 9
EH +CRP
Sbjct: 201 EHFARCRPL 209
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 DQCRPCG 10
D C+ CG
Sbjct: 4384 DVCQVCG 4390
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 DQCRPCG 10
D C+ CG
Sbjct: 4404 DVCQVCG 4410
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 4 DQCRPCG 10
D C+ CG
Sbjct: 4434 DVCQVCG 4440
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 DQCRPCG 10
D C+ CG
Sbjct: 4384 DVCQVCG 4390
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 DQCRPCG 10
D C+ CG
Sbjct: 4404 DVCQVCG 4410
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 DQCRPCG 10
D C+ CG
Sbjct: 4434 DVCQVCG 4440
72|SequenceR|365|356|GPSKREHSDQ
>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate
Query: 1 GPSKREH 7
GP REH
Sbjct: 191 GPVSREH 197
>sp|SHDAG_HDVM1|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRARTDQ 78
>sp|SHDAG_HDVM2|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRARTDQ 78
>sp|SHDAG_HDVIT|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRARTDQ 78
>sp|SHDAG_HDVWO|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRARTDQ 78
>sp|LHDAG_HDVM1|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRARTDQ 78
>sp|LHDAG_HDVM2|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRARTDQ 78
>sp|SHDAG_HDVU2|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRARADQ 78
>sp|LHDAG_HDVIT|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRARTDQ 78
>sp|SHDAG_HDVD3|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRARTDQ 78
>sp|SHDAG_HDV27|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRARTDQ 78
>sp|LHDAG_HDVWO|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRARTDQ 78
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PSKREHSDQ 10
P K+E SD+
Sbjct: 203 PDKKEESDE 211
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 1 GPSKREH 7
GP REH
Sbjct: 192 GPISREH 198
>sp|LHDAG_HDVU2|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRARADQ 78
>sp|LHDAG_HDVD3|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRARTDQ 78
>sp|CORE5_ADE02|CORE-CAPSID bridging protein|Human adenovirus C serotype 2
Query: 1 GPSKREHSD 9
GP K+E D
Sbjct: 20 GPPKKEEQD 28
>sp|SHDAG_HDVL1|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRARTDQ 78
>sp|LHDAG_HDVS2|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRPRTDQ 78
>sp|LHDAG_HDVS1|LARGE delta antigen|Hepatitis delta virus genotype II
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRPRTDQ 78
>sp|LHDAG_HDV83|LARGE delta antigen|Hepatitis delta virus genotype II
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRPRTDQ 78
>sp|CORE5_ADE05|CORE-CAPSID bridging protein|Human adenovirus C serotype 5
Query: 1 GPSKREHSD 9
GP K+E D
Sbjct: 20 GPPKKEEQD 28
>sp|SHDAG_HDVS1|SMALL delta antigen|Hepatitis delta virus genotype II
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRPRTDQ 78
>sp|SHDAG_HDV83|SMALL delta antigen|Hepatitis delta virus genotype II
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRPRTDQ 78
>sp|LHDAG_HDVTW|LARGE delta antigen|Hepatitis delta virus genotype II
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRPRTDQ 78
>sp|SHDAG_HDVS2|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRPRTDQ 78
>sp|SHDAG_HDVTW|SMALL delta antigen|Hepatitis delta virus genotype II
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRPRTDQ 78
>sp|LHDAG_HDVL1|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 2 PSKREHSDQ 10
P+KR +DQ
Sbjct: 70 PAKRARTDQ 78
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 1 GPSKREHSD 9
GP EH D
Sbjct: 191 GPVSHEHVD 199
73|SequenceR|370|361|QPSLSGPSKR
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 QPSLSGP 7
QP+L GP
Sbjct: 62 QPTLDGP 68
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 QPSLSGP 7
QP+L GP
Sbjct: 61 QPTLDGP 67
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 QPSLSGP 7
QP+L GP
Sbjct: 62 QPTLDGP 68
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 QPSLSGP 7
QP+L GP
Sbjct: 62 QPTLDGP 68
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 QPSLSGP 7
QP+L GP
Sbjct: 62 QPTLDGP 68
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 QPSLSGPSKR 10
QP GP++R
Sbjct: 56 QPKAPGPAQR 65
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 QPSLSGPSK 9
+PSLSG K
Sbjct: 1534 KPSLSGKDK 1542
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 QPSLSGPSK 9
+PSLSG K
Sbjct: 1534 KPSLSGKDK 1542
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 QPSLSGPSKR 10
QP GP++R
Sbjct: 56 QPKALGPAQR 65
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 QPSLSGPS 8
+P+L+GP+
Sbjct: 1619 KPTLTGPT 1626
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 QPSLSGPS 8
+P+L+GP+
Sbjct: 1619 KPTLTGPT 1626
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 QPSLSGPS 8
+P+L+GP+
Sbjct: 1619 KPTLTGPT 1626
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 QPSLSGPS 8
+P+L+GP+
Sbjct: 1620 KPTLTGPT 1627
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 QPSLSGPS 8
+P+L+GP+
Sbjct: 1619 KPTLTGPT 1626
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 QPSLSGPS 8
+P+L+GP+
Sbjct: 1620 KPTLTGPT 1627
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 QPSLSGPS 8
+P+L+GP+
Sbjct: 1616 KPTLTGPT 1623
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 QPSLSGPS 8
+P+L+GP+
Sbjct: 1619 KPTLTGPT 1626
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 QPSLSGPS 8
+P+L+GP+
Sbjct: 1616 KPTLTGPT 1623
74|SequenceR|375|366|CQPLPQPSLS
>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)
Query: 1 CQPLPQPSLS 10
C+P+ +P+L+
Sbjct: 5 CEPILKPTLN 14
>sp|VL2_HPV67|MINOR capsid protein L2|Human papillomavirus 67
Query: 3 PLPQPSLS 10
P PQPS+S
Sbjct: 367 PFPQPSIS 374
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 QPLPQPS 8
QPL QP+
Sbjct: 764 QPLEQPT 770
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 QPLPQPS 8
QPL QP+
Sbjct: 764 QPLEQPT 770
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 1 CQPLPQP 7
QPLPQP
Sbjct: 59 GQPLPQP 65
>sp|REX_HTL3P|PROTEIN Rex|Human T-cell leukemia virus 3
Query: 1 CQPLPQPSL 9
CQP P P+L
Sbjct: 148 CQPCPSPTL 156
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 CQPLPQPS 8
CQ P+PS
Sbjct: 1313 CQKDPRPS 1320
>sp|REX_HTL32|PROTEIN Rex|Human T-cell leukemia virus 3
Query: 1 CQPLPQPSL 9
CQP P P+L
Sbjct: 148 CQPCPSPTL 156
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 CQPLPQPSLS 10
C PLP P+ +
Sbjct: 2070 CTPLPAPNYT 2079
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 CQPLPQPSLS 10
C PLP P+ +
Sbjct: 2070 CTPLPAPNYT 2079
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CQPLPQP 7
C P+P P
Sbjct: 804 CVPIPNP 810
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 CQPLPQP 7
C P+P P
Sbjct: 804 CVPIPNP 810
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 CQPLPQPS 8
C PLP P+
Sbjct: 2070 CTPLPAPN 2077
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 QPLPQP 7
+PLPQP
Sbjct: 506 RPLPQP 511
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 QPLPQP 7
+PLPQP
Sbjct: 506 RPLPQP 511
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 QPLPQP 7
+PLPQP
Sbjct: 506 RPLPQP 511
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 1 CQPLPQP 7
C P+P P
Sbjct: 765 CMPVPAP 771
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 QPLPQPSLS 10
+PLP+P ++
Sbjct: 473 KPLPRPEIA 481
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 QPLPQPSLS 10
+PLP+P ++
Sbjct: 473 KPLPRPEIA 481
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 CQPLPQPS 8
C P QP+
Sbjct: 603 CNPFAQPA 610
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CQPLPQPS 8
C P QP+
Sbjct: 603 CNPFAQPA 610
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 CQPLPQPS 8
C P QP+
Sbjct: 603 CNPFAQPA 610
75|SequenceR|380|371|KLHRKCQPLP
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 6 CQPLP 10
CQPLP
Sbjct: 1899 CQPLP 1903
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 HRKCQPLP 10
HRKCQ P
Sbjct: 1430 HRKCQTGP 1437
>sp|VE2_HPV34|REGULATORY protein E2|Human papillomavirus type 34
Query: 1 KLHRKCQP 8
K HR+C P
Sbjct: 232 KRHRQCDP 239
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 2 LHRKCQPLP 10
+H+K PLP
Sbjct: 353 VHQKPPPLP 361
>sp|CRMB_CWPXG|SOLUBLE TNF receptor II|Cowpox virus (strain GRI-90 /
Query: 5 KCQPLP 10
KC+P+P
Sbjct: 169 KCEPVP 174
>sp|CRMB_VARV|CYTOKINE response-modifying protein B|Variola virus
Query: 5 KCQPLP 10
KC+P+P
Sbjct: 167 KCEPVP 172
>sp|CRMB_VAR67|CYTOKINE response-modifying protein B|Variola virus (isolate
Query: 5 KCQPLP 10
KC+P+P
Sbjct: 167 KCEPVP 172
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 3 HRKCQP 8
H KC P
Sbjct: 537 HEKCNP 542
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 2 LHRKCQPL 9
LH+K +P+
Sbjct: 1225 LHKKSEPI 1232
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 LHRKCQPL 9
LH+K +P+
Sbjct: 1225 LHKKSEPI 1232
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LHRKCQPL 9
LH+K +P+
Sbjct: 1225 LHKKSEPI 1232
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 LHRKCQPL 9
LH+K +P+
Sbjct: 1225 LHKKSEPI 1232
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 2 LHRKCQPL 9
LH+K +P+
Sbjct: 1225 LHKKSEPI 1232
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 RKCQPLP 10
R C PLP
Sbjct: 1389 RGCLPLP 1395
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 LHRKC 6
+HRKC
Sbjct: 224 IHRKC 228
76|SequenceR|385|376|LLQVQKLHRK
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 LLQVQKLHR 9
++QV+ LHR
Sbjct: 151 IVQVESLHR 159
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 LLQVQKLHR 9
++QV+ LHR
Sbjct: 169 IVQVESLHR 177
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LLQVQKLHR 9
L Q+Q LHR
Sbjct: 621 LEQIQNLHR 629
>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 LLQVQKLHR 9
++QV+ LHR
Sbjct: 117 IIQVESLHR 125
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LLQVQKLHR 9
L Q+Q LHR
Sbjct: 621 LEQIQNLHR 629
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 3 QVQKLHRK 10
Q+Q LH++
Sbjct: 614 QIQTLHKR 621
>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)
Query: 1 LLQVQKLHR 9
L+ VQ LH+
Sbjct: 439 LIDVQSLHQ 447
77|SequenceR|390|381|HDECFLLQVQ
>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I68A4|NEURAMINIDASE A virus (strain A/Hong
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I68A0|NEURAMINIDASE A virus (strain A/Aichi/2/1968
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I67A0|NEURAMINIDASE A virus (strain A/Tokyo/3/1967
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957
Query: 4 CFLLQV 9
CFL+Q+
Sbjct: 21 CFLMQI 26
>sp|UL88_HHV7J|PROTEIN U59|Human herpesvirus 7 (strain JI)
Query: 1 HDECF 5
H+ECF
Sbjct: 246 HEECF 250
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain
Query: 1 HDECFL 6
HD CF+
Sbjct: 37 HDFCFV 42
>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 1 HDECFLLQV 9
HD F LQV
Sbjct: 237 HDPNFTLQV 245
78|SequenceR|395|386|CIPEDHDECF
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 PEDHD 7
PEDHD
Sbjct: 910 PEDHD 914
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 IPEDHDEC 9
+PE+H+ C
Sbjct: 275 LPENHERC 282
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 IPEDHDEC 9
+PE+H+ C
Sbjct: 275 LPENHERC 282
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 IPEDHDEC 9
+PE+H+ C
Sbjct: 275 LPENHERC 282
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 1 CIPEDHDECF 10
C P+D +C+
Sbjct: 143 CGPDDQVQCY 152
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 1 CIPEDHDECF 10
C P+D +C+
Sbjct: 143 CGPDDQVQCY 152
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 PEDHDECF 10
P D ECF
Sbjct: 2079 PADKGECF 2086
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 PEDHDECF 10
P D ECF
Sbjct: 2079 PADKGECF 2086
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 PEDHDECF 10
P D ECF
Sbjct: 2080 PADKGECF 2087
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 PEDHDECF 10
P D ECF
Sbjct: 2089 PADKGECF 2096
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 PEDHDECF 10
P D ECF
Sbjct: 2090 PADKGECF 2097
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 PEDHDECF 10
P D ECF
Sbjct: 2080 PADKGECF 2087
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 PEDHDECF 10
P D ECF
Sbjct: 2082 PADKGECF 2089
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 PEDHDECF 10
P D ECF
Sbjct: 2086 PADKGECF 2093
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 PEDHDECF 10
P D ECF
Sbjct: 2080 PADKGECF 2087
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 PEDHDECF 10
P D ECF
Sbjct: 2096 PADKGECF 2103
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 PEDHDECF 10
P D ECF
Sbjct: 2078 PADKGECF 2085
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 PEDHDECF 10
P D ECF
Sbjct: 2078 PADKGECF 2085
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 PEDHDECF 10
P D ECF
Sbjct: 2088 PADKGECF 2095
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 2 IPEDHDECF 10
IP H CF
Sbjct: 195 IPRHHGACF 203
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 PEDHDECF 10
P D ECF
Sbjct: 2088 PADKGECF 2095
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 PEDHDECF 10
P D ECF
Sbjct: 2091 PADKGECF 2098
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 PEDHDECF 10
P D ECF
Sbjct: 2098 PADKGECF 2105
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 IPEDHD 7
+PEDH+
Sbjct: 73 LPEDHE 78
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 2 IPEDH 6
IPEDH
Sbjct: 298 IPEDH 302
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 2 IPEDH 6
IPEDH
Sbjct: 295 IPEDH 299
>sp|E3GL_ADE03|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 3
Query: 3 PEDHDECF 10
P DHD C
Sbjct: 23 PLDHDPCL 30
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 CIPEDHDEC 9
CI +D + C
Sbjct: 556 CIEDDTENC 564
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 IPEDHDECF 10
+PE DE F
Sbjct: 1651 LPEIEDEVF 1659
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 IPEDHDECF 10
+PE DE F
Sbjct: 1650 LPEIEDEVF 1658
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 IPEDHDECF 10
+PE DE F
Sbjct: 1651 LPEIEDEVF 1659
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 PEDHDECF 10
P D +CF
Sbjct: 2077 PADKGDCF 2084
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 IPEDHDEC 9
IP++ EC
Sbjct: 343 IPDNRTEC 350
>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain
Query: 1 CIPEDHD 7
C+P D D
Sbjct: 158 CLPVDKD 164
>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains
Query: 1 CIPEDHD 7
C+P D D
Sbjct: 158 CLPVDKD 164
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 PEDHDE 8
PE HD+
Sbjct: 707 PETHDD 712
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 IPEDHD 7
+P DHD
Sbjct: 1756 LPVDHD 1761
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 2 IPEDHDEC 9
+PE+ D C
Sbjct: 303 LPENPDRC 310
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 CIPEDHDE 8
CI E H E
Sbjct: 315 CIKEMHQE 322
>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)
Query: 3 PEDHDE 8
P+D+DE
Sbjct: 169 PDDYDE 174
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 CIPEDHDE 8
CI E H E
Sbjct: 315 CIKEIHQE 322
>sp|VGF_VARV|PRO-VARIOLA growth factor|Variola virus
Query: 1 CIPEDHDECF 10
C PE + CF
Sbjct: 45 CGPEGNGYCF 54
>sp|E312_ADE05|EARLY E3A 12.5 kDa protein|Human adenovirus C serotype 5
Query: 2 IPEDHDE 8
+PEDH E
Sbjct: 35 LPEDHIE 41
79|SequenceR|400|391|LSCILCIPED
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 SCILCIP 8
SC+LCIP
Sbjct: 494 SCVLCIP 500
Query: 3 CIL--CIPE 9
CIL C+PE
Sbjct: 190 CILVVCVPE 198
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 SCILCIP 8
SC+LCIP
Sbjct: 493 SCVLCIP 499
Query: 4 ILCIPE 9
++C+PE
Sbjct: 193 VVCVPE 198
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 SCILCIP 8
SC+LCIP
Sbjct: 493 SCVLCIP 499
Query: 4 ILCIPE 9
++C+PE
Sbjct: 193 VVCVPE 198
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 SCILCIP 8
SC+LCIP
Sbjct: 495 SCVLCIP 501
Query: 4 ILCIPE 9
++C+PE
Sbjct: 193 VVCVPE 198
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 SCILCIP 8
SC+LCIP
Sbjct: 495 SCVLCIP 501
Query: 4 ILCIPE 9
++C+PE
Sbjct: 193 VVCVPE 198
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 SCILCIP 8
SC+LC+P
Sbjct: 493 SCVLCVP 499
Query: 4 ILCIPE 9
++C+PE
Sbjct: 193 VVCVPE 198
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 SCILCIP 8
SC+LC+P
Sbjct: 493 SCVLCVP 499
Query: 4 ILCIPE 9
++C+PE
Sbjct: 193 VVCVPE 198
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 SCILCIP 8
SC+LC+P
Sbjct: 494 SCVLCVP 500
Query: 4 ILCIPE 9
++C+PE
Sbjct: 193 VVCVPE 198
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 SCILCIP 8
SC+LC+P
Sbjct: 494 SCVLCVP 500
Query: 4 ILCIPE 9
++C+PE
Sbjct: 193 VVCVPE 198
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 SCILCIP 8
SC+LC+P
Sbjct: 494 SCVLCVP 500
Query: 4 ILCIPE 9
++C+PE
Sbjct: 193 VVCVPE 198
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 SCILCIP 8
SC+LC+P
Sbjct: 495 SCVLCVP 501
Query: 4 ILCIPE 9
++C+PE
Sbjct: 193 VVCVPE 198
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 SCILCIP 8
SC+LC+P
Sbjct: 493 SCVLCVP 499
Query: 4 ILCIPE 9
++C+PE
Sbjct: 193 VVCVPE 198
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 SCILCIP 8
SC+LC+P
Sbjct: 493 SCVLCVP 499
Query: 4 ILCIPE 9
++C+PE
Sbjct: 193 VVCVPE 198
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 SCILCIP 8
SC+LC+P
Sbjct: 496 SCVLCVP 502
Query: 4 ILCIPE 9
++C+PE
Sbjct: 193 VVCVPE 198
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 SCILCIP 8
SC+LC+P
Sbjct: 495 SCVLCVP 501
Query: 4 ILCIPE 9
++C+PE
Sbjct: 193 VVCVPE 198
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 SCILCIP 8
SC+LC+P
Sbjct: 493 SCVLCVP 499
Query: 4 ILCIPE 9
++C+PE
Sbjct: 193 VVCVPE 198
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 2 SCILCIP 8
SC+LC+P
Sbjct: 495 SCVLCVP 501
Query: 4 ILCIPE 9
++C+PE
Sbjct: 193 VVCVPE 198
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 CILCIP 8
C+LC+P
Sbjct: 494 CVLCVP 499
Query: 4 ILCIPE 9
++C+PE
Sbjct: 193 VVCVPE 198
>sp|NEC2_HHV8P|NUCLEAR egress protein 2|Human herpesvirus 8 type P
Query: 1 LSCILCIPED 10
L C LC P D
Sbjct: 93 LKCFLCRPSD 102
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 5 LCIPED 10
LC PED
Sbjct: 20 LCAPED 25
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 5 LCIPED 10
LC PED
Sbjct: 20 LCSPED 25
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 SCILCIPE 9
+ I CIPE
Sbjct: 27 ATITCIPE 34
>sp|U16_HHV6G|PROTEIN U17/U16|Human herpesvirus 6A (strain GS)
Query: 2 SCILCIPE 9
S +LC PE
Sbjct: 78 SLLLCCPE 85
>sp|U17_HHV6Z|PROTEIN U17|Human herpesvirus 6B (strain Z29)
Query: 2 SCILCIPE 9
S +LC PE
Sbjct: 78 SLLLCCPE 85
>sp|U16_HHV6U|PROTEIN U17/U16|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SCILCIPE 9
S +LC PE
Sbjct: 78 SLLLCCPE 85
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 2 SCILCIPE 9
+ I C+PE
Sbjct: 27 ATITCVPE 34
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 LSCILCI 7
LSC C+
Sbjct: 7 LSCFFCL 13
>sp|MC007_MCV1|PROTEIN MC007|Molluscum contagiosum virus subtype 1
Query: 4 ILCIPE 9
+LC+PE
Sbjct: 122 VLCVPE 127
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 CILCI 7
CILC+
Sbjct: 3754 CILCV 3758
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 CILCI 7
CILC+
Sbjct: 3704 CILCV 3708
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 CILCI 7
CILC+
Sbjct: 3724 CILCV 3728
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 CILCI 7
CILC+
Sbjct: 3754 CILCV 3758
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 CILCI 7
CILC+
Sbjct: 3704 CILCV 3708
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 CILCI 7
CILC+
Sbjct: 3724 CILCV 3728
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LSCILCI 7
+ CI+C+
Sbjct: 236 IPCIVCV 242
>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LSCILCI 7
L CI CI
Sbjct: 373 LICIACI 379
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CILCI 7
CI+C+
Sbjct: 297 CIICV 301
>sp|YVAS_VACCC|UNCHARACTERIZED 7.5 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SCILCIPE 9
S LCIP+
Sbjct: 25 SFFLCIPK 32
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CILCI 7
CI+C+
Sbjct: 297 CIICV 301
>sp|MC014_MCV1|PROTEIN MC014|Molluscum contagiosum virus subtype 1
Query: 1 LSCILC 6
LSC LC
Sbjct: 32 LSCSLC 37
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 1 LSCILCI 7
+ CI+C+
Sbjct: 243 IPCIVCV 249
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 LSCILCI 7
+ C+LC+
Sbjct: 1 MKCLLCL 7
80|SequenceR|405|396|QHEQSLSCIL
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 2 HEQSLSCI 9
H+Q +SC+
Sbjct: 283 HDQKVSCV 290
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 3 EQSLSCI 9
+QSLSC+
Sbjct: 983 QQSLSCL 989
>sp|TEGU_HCMV|TEGUMENT protein|Human cytomegalovirus (HHV-5) (Human herpesvirus
Query: 4 QSLSCIL 10
QS+SCIL
Sbjct: 425 QSISCIL 431
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 4 QSLSCI 9
QSLSC+
Sbjct: 991 QSLSCL 996
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 QHEQSLSC 8
Q EQ+L+C
Sbjct: 2858 QLEQALNC 2865
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 QHEQSLSCIL 10
+HEQS+ +L
Sbjct: 4118 EHEQSMYNLL 4127
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 2 HEQSLSCI 9
H Q ++C+
Sbjct: 283 HNQKITCV 290
>sp|EV45_HHV1M|ENVELOPE protein UL45|Human herpesvirus 1 (strain MP)
Query: 2 HEQSLSCI 9
HE +L CI
Sbjct: 64 HEFNLGCI 71
>sp|EV45_HHV1K|ENVELOPE protein UL45|Human herpesvirus 1 (strain KOS)
Query: 2 HEQSLSCI 9
HE +L CI
Sbjct: 64 HEFNLGCI 71
>sp|EV45_HHV11|ENVELOPE protein UL45|Human herpesvirus 1 (strain 17)
Query: 2 HEQSLSCI 9
HE +L CI
Sbjct: 64 HEFNLGCI 71
>sp|VP7_ROTGI|OUTER capsid glycoprotein VP7|Rotavirus B (isolate RVB/Rat/United
Query: 2 HEQSLSCIL 10
HE+S C L
Sbjct: 23 HEESQICFL 31
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 1 QHEQSLSCIL 10
Q+E+S C+L
Sbjct: 280 QNEESSICLL 289
81|SequenceR|410|401|RVRHGQHEQS
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RVRHGQHEQ 9
RV +GQHE+
Sbjct: 493 RVSNGQHEE 501
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RVRHGQHEQS 10
RVR G H S
Sbjct: 467 RVRRGDHPLS 476
82|SequenceR|415|406|VEEIPRVRHG
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 VEEIPRVRHG 10
VEEI +HG
Sbjct: 309 VEEIAETQHG 318
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 1 VEEIPRVRHG 10
+EE+P++ G
Sbjct: 190 LEEVPKIFEG 199
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 PRVRHG 10
PRVR G
Sbjct: 464 PRVRRG 469
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 PRVRHG 10
PRVR G
Sbjct: 462 PRVRRG 467
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 1 VEEIPRVRHG 10
+EE+P++ G
Sbjct: 179 LEEVPKIFEG 188
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 PRVRHG 10
PRV HG
Sbjct: 2605 PRVGHG 2610
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 5 PRVRHG 10
PRV HG
Sbjct: 2583 PRVGHG 2588
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 5 PRVRHG 10
PRV HG
Sbjct: 2578 PRVGHG 2583
83|SequenceR|420|411|KHELAVEEIP
>sp|VP40_MABVM|MATRIX protein VP40|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 HELAVEEIP 10
H+L VE++P
Sbjct: 233 HQLRVEKVP 241
>sp|VP40_MABVA|MATRIX protein VP40|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 HELAVEEIP 10
H+L VE++P
Sbjct: 233 HQLRVEKVP 241
>sp|VP40_MABVR|MATRIX protein VP40|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 HELAVEEIP 10
H+L VE++P
Sbjct: 233 HQLRVEKVP 241
>sp|VP40_MABVP|MATRIX protein VP40|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 HELAVEEIP 10
H+L VE++P
Sbjct: 233 HQLRVEKVP 241
>sp|VP40_MABVO|MATRIX protein VP40|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 HELAVEEIP 10
H+L VE++P
Sbjct: 233 HQLRVEKVP 241
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 KHELAVEEIP 10
KH +EE+P
Sbjct: 1890 KHTTNLEELP 1899
>sp|TRX2_EBVB9|TRIPLEX capsid protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 HELAVEEIP 10
+ELA+ E+P
Sbjct: 186 YELALPEVP 194
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 2 HELAVEEI 9
H+LA EEI
Sbjct: 282 HDLAGEEI 289
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 1 KHELAVEEIP 10
+HE+ E IP
Sbjct: 476 RHEIFNERIP 485
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KHELAVEEIP 10
+HE+ E IP
Sbjct: 476 RHEIFNERIP 485
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 AVEEIP 10
AVEE+P
Sbjct: 2136 AVEELP 2141
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 AVEEIP 10
AVEE+P
Sbjct: 2136 AVEELP 2141
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 KHELAVEEI 9
++ LA+EEI
Sbjct: 169 QNNLAIEEI 177
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 KHELAVEEI 9
++ LA+EEI
Sbjct: 169 QNNLAIEEI 177
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 AVEEIP 10
AVEE+P
Sbjct: 2136 AVEELP 2141
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 2 HELAVEEI 9
H+L EEI
Sbjct: 280 HDLPAEEI 287
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 AVEEIP 10
AVEE+P
Sbjct: 2136 AVEELP 2141
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 AVEEIP 10
AVEE+P
Sbjct: 2136 AVEELP 2141
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 HELAVEEIP 10
H L EE P
Sbjct: 12 HSLTFEECP 20
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 HELAVEEIP 10
H L EE P
Sbjct: 12 HSLTFEECP 20
84|SequenceR|425|416|KQIKKKHELA
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 QIKKKHEL 9
QI++K+EL
Sbjct: 684 QIRRKYEL 691
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 QIKKKHEL 9
++K+KHE
Sbjct: 1148 EVKEKHEF 1155
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 QIKKKHEL 9
++K+KHE
Sbjct: 1147 EVKEKHEF 1154
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 QIKKKHEL 9
++K+KHE
Sbjct: 1147 EVKEKHEF 1154
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 QIKKKHEL 9
++K+KHE
Sbjct: 1157 EVKEKHEF 1164
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 QIKKKHEL 9
++K+KHE
Sbjct: 1150 EVKEKHEF 1157
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 QIKKKHEL 9
++K+KHE
Sbjct: 1138 EVKEKHEF 1145
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 QIKKKHEL 9
++K+KHE
Sbjct: 1138 EVKEKHEF 1145
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 QIKKKHEL 9
++K+KHE
Sbjct: 1139 EVKEKHEF 1146
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 QIKKKHEL 9
++K+KHE
Sbjct: 1137 EVKEKHEF 1144
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 QIKKKHEL 9
++K+KHE
Sbjct: 1137 EVKEKHEF 1144
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 QIKKKHEL 9
++K+KHE
Sbjct: 1141 EVKEKHEF 1148
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 QIKKKHEL 9
++K+KHE
Sbjct: 1136 EVKEKHEF 1143
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KQIKKKHEL 9
K+ +KKH++
Sbjct: 556 KKTQKKHKI 564
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KQIKKKHEL 9
K+ +KKH++
Sbjct: 556 KKTQKKHKI 564
>sp|VCYCL_HHV8P|VIRAL cyclin homolog|Human herpesvirus 8 type P
Query: 1 KQIKKKH 7
KQ+ K+H
Sbjct: 86 KQVSKEH 92
85|SequenceR|430|421|LHELQKQIKK
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1352 ELQKQISK 1359
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1358 ELQKQISK 1365
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 LHELQKQI 8
L ELQKQ+
Sbjct: 1141 LTELQKQL 1148
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 LHELQKQI 8
L ELQKQ+
Sbjct: 1141 LTELQKQL 1148
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 HELQKQIKK 10
ELQKQI K
Sbjct: 1353 RELQKQITK 1361
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1365 ELQKQITK 1372
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1359 ELQKQITK 1366
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1371 ELQKQITK 1378
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1357 ELQKQITK 1364
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1358 ELQKQITK 1365
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1359 ELQKQITK 1366
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1371 ELQKQITK 1378
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1371 ELQKQITK 1378
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1360 ELQKQITK 1367
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1359 ELQKQITK 1366
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1359 ELQKQITK 1366
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1359 ELQKQITK 1366
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1361 ELQKQITK 1368
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1354 ELQKQITK 1361
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1364 ELQKQITK 1371
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1363 ELQKQITK 1370
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 HELQKQIKK 10
ELQKQI K
Sbjct: 1355 RELQKQITK 1363
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1354 ELQKQITK 1361
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1356 ELQKQITK 1363
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1360 ELQKQITK 1367
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 1 LHELQKQIKK 10
L+E++K+I K
Sbjct: 498 LYEMKKEIPK 507
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 HELQKQIKK 10
H L KQ++K
Sbjct: 1195 HTLSKQLQK 1203
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 LHELQKQI 8
L+E QKQI
Sbjct: 898 LYENQKQI 905
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1355 ELQKQIMK 1362
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 LHELQKQIK 9
+H+L +Q+K
Sbjct: 574 IHDLAEQVK 582
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 1 LHELQKQI 8
L ELQK+I
Sbjct: 4 LEELQKEI 11
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 HELQKQIKK 10
ELQKQI K
Sbjct: 1355 RELQKQIIK 1363
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1360 ELQKQILK 1367
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 HELQKQIKK 10
ELQKQI K
Sbjct: 1353 RELQKQIIK 1361
>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LHELQKQIK 9
L ELQ Q+K
Sbjct: 459 LRELQDQLK 467
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1359 ELQKQIIK 1366
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1358 ELQKQILK 1365
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ELQKQIKK 10
ELQKQI K
Sbjct: 1359 ELQKQIIK 1366
86|SequenceR|435|426|KRLKKLHELQ
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 1 KRLKKLHE 8
KR+ K+HE
Sbjct: 244 KRITKIHE 251
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 1 KRLKKLHE 8
KR+ K+HE
Sbjct: 248 KRITKIHE 255
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 LKKLHE 8
L+KLHE
Sbjct: 1958 LRKLHE 1963
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 LKKLHE 8
L+KLHE
Sbjct: 1959 LRKLHE 1964
>sp|VE6_HPV31|PROTEIN E6|Human papillomavirus 31
Query: 1 KRLKKLHELQ 10
+R +KLHEL
Sbjct: 7 ERPRKLHELS 16
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 LKKLHELQ 10
LKKL EL+
Sbjct: 3033 LKKLSELE 3040
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 KRLKKLHE 8
+RLKKL +
Sbjct: 891 RRLKKLED 898
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 1 KRLKKLHEL 9
KRL+ +H L
Sbjct: 238 KRLESIHHL 246
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 LKKLHELQ 10
++KLH+LQ
Sbjct: 571 IRKLHKLQ 578
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 1 KRLKKLHEL 9
KRL+ +H L
Sbjct: 238 KRLESIHHL 246
>sp|CEP1_HHV6U|CYTOPLASMIC envelopment protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KRLKKLHELQ 10
K LKKL EL+
Sbjct: 2 KSLKKLKELE 11
87|SequenceR|440|431|QEEGSKRLKK
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 EEGSKRLKK 10
EE S+RLK+
Sbjct: 2188 EEASRRLKR 2196
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 QEEGSKRLKK 10
+ +G KR+KK
Sbjct: 891 ESQGKKRIKK 900
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 QEEGSKRLKK 10
+ +G KR+KK
Sbjct: 951 ETKGKKRIKK 960
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 1 QEEGSKRLKK 10
+ G KR+KK
Sbjct: 1022 ETRGKKRIKK 1031
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 QEEGSKRLKK 10
+ G KR+KK
Sbjct: 1018 ETRGKKRIKK 1027
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 QEEGSKRLKK 10
+ G KR+KK
Sbjct: 1027 ETRGKKRIKK 1036
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 QEEGSKRLKK 10
+ G KR+KK
Sbjct: 1027 ETRGKKRIKK 1036
88|SequenceR|445|436|EGYSRQEEGS
>sp|Z_LYCVA|RING finger protein Z|Lymphocytic choriomeningitis virus (strain
Query: 1 EGYSRQEEGS 10
+G SR+E+G+
Sbjct: 3 QGKSREEKGT 12
>sp|HBZ_HTL1A|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 1 EGYSRQEEG 9
+GY+RQ EG
Sbjct: 165 DGYTRQLEG 173
>sp|HBZ_HTL1C|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 1 EGYSRQEEG 9
+GY+RQ EG
Sbjct: 165 DGYTRQLEG 173
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 EGYSRQEE 8
EGY QEE
Sbjct: 927 EGYYYQEE 934
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 EGYSRQEE 8
EGY QEE
Sbjct: 926 EGYYYQEE 933
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 EGYSRQEEG 9
+GY+ EEG
Sbjct: 61 DGYTFVEEG 69
89|SequenceR|450|441|SVAKEEGYSR
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 1 SVAKEEGY 8
S++KE GY
Sbjct: 324 SISKEGGY 331
90|SequenceR|455|446|TQKLFSVAKE
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 1 TQKLFSVAKE 10
+QK F +AKE
Sbjct: 804 SQKQFELAKE 813
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 3 KLFSVAKE 10
+LFS++KE
Sbjct: 840 RLFSLSKE 847
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 1 TQKLFSVAKE 10
+QK F +AKE
Sbjct: 807 SQKQFELAKE 816
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TQKLFSVAKE 10
T+KLFS E
Sbjct: 90 TKKLFSEVME 99
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 TQKLFSVAKE 10
T+KLFS E
Sbjct: 90 TKKLFSEVME 99
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 1 TQKLFSVAKE 10
T+KLFS E
Sbjct: 90 TKKLFSEVME 99
91|SequenceR|460|451|QKLAETQKLF
>sp|REV_HV2SB|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 QKLAETQ 7
Q+LAETQ
Sbjct: 91 QRLAETQ 97
>sp|UL88_HHV7J|PROTEIN U59|Human herpesvirus 7 (strain JI)
Query: 1 QKLAETQK 8
+KLAE+Q+
Sbjct: 190 KKLAESQR 197
92|SequenceR|465|456|KRQVRQKLAE
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 KRQVRQKLAE 10
++QV QK+AE
Sbjct: 1196 EKQVEQKIAE 1205
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 KRQVRQKLAE 10
++QV QK+AE
Sbjct: 1196 EKQVEQKIAE 1205
>sp|U13_HHV6Z|UNCHARACTERIZED protein U13|Human herpesvirus 6B (strain Z29)
Query: 1 KRQVRQKL 8
K+Q R+KL
Sbjct: 5 KKQARRKL 12
93|SequenceR|470|461|YVQELKRQVR
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 YVQELKRQVR 10
YVQELK +R
Sbjct: 4 YVQELKGLIR 13
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 2 VQELKRQV 9
+QELKR++
Sbjct: 68 IQELKRKL 75
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 5 LKRQVR 10
LKRQ+R
Sbjct: 2699 LKRQIR 2704
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 5 LKRQVR 10
LKRQ+R
Sbjct: 2699 LKRQIR 2704
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 YVQELKR 7
YVQ L+R
Sbjct: 3416 YVQSLRR 3422
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 YVQELK 6
YVQE+K
Sbjct: 404 YVQEMK 409
>sp|PG148_MONPV|DNA polymerase processivity factor component|Monkeypox virus (MPXV)
Query: 4 ELKRQV 9
ELKRQV
Sbjct: 204 ELKRQV 209
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 YVQELK 6
YVQE+K
Sbjct: 404 YVQEMK 409
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 YVQELKRQ 8
Y+QE+K++
Sbjct: 1426 YLQEIKQK 1433
94|SequenceR|475|466|QELFYYVQEL
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 QELFYYV 7
++LFYYV
Sbjct: 803 EKLFYYV 809
>sp|SPIKE_ADE1P|FIBER protein|Human adenovirus B serotype 11
Query: 4 FYYVQE 9
FYY++E
Sbjct: 318 FYYIRE 323
>sp|SPIKE_ADE1A|FIBER protein|Human adenovirus B serotype 11
Query: 4 FYYVQE 9
FYY++E
Sbjct: 318 FYYIRE 323
>sp|SPIKE_ADE07|FIBER protein|Human adenovirus B serotype 7
Query: 4 FYYVQE 9
FYY++E
Sbjct: 336 FYYIRE 341
>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24
Query: 5 YYVQEL 10
YYVQ+L
Sbjct: 464 YYVQDL 469
>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QELFYYVQE 9
QEL Y V+E
Sbjct: 133 QELQYLVEE 141
>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QELFYYVQE 9
QEL Y V+E
Sbjct: 133 QELQYLVEE 141
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 LFYYVQEL 10
L Y++QEL
Sbjct: 787 LQYWIQEL 794
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 LFYYVQEL 10
L Y++QEL
Sbjct: 791 LQYWIQEL 798
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 LFYYVQEL 10
L Y++QEL
Sbjct: 799 LQYWIQEL 806
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 QELFYYVQEL 10
++L Y +Q+L
Sbjct: 3510 EQLLYAIQQL 3519
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QELFYYVQEL 10
++LFYY+ +
Sbjct: 128 KQLFYYIGTM 137
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QELFYYVQEL 10
++LFYY+ +
Sbjct: 128 KQLFYYIGTM 137
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 QELFYYVQEL 10
++LFYY+ +
Sbjct: 128 KQLFYYIGTM 137
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 QELFYYVQEL 10
++L Y +Q+L
Sbjct: 3510 EQLLYAIQQL 3519
>sp|NSP1_ROTHC|NON-STRUCTURAL protein 1|Rotavirus C (isolate RVC/Human/United
Query: 2 ELFYY 6
ELFYY
Sbjct: 265 ELFYY 269
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 ELFYYV 7
+LFYY+
Sbjct: 22 KLFYYI 27
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 ELFYYV 7
+LFYY+
Sbjct: 22 KLFYYI 27
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 ELFYYV 7
+LFYY+
Sbjct: 22 KLFYYI 27
95|SequenceR|480|471|FFHEQQELFY
>sp|UL01_HCMVA|GLYCOPROTEIN UL1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FFHEQQELFY 10
HEQ++ FY
Sbjct: 30 LLHEQKKAFY 39
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 EQQELF 9
EQQELF
Sbjct: 602 EQQELF 607
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 1 FFHEQQELFY 10
+ HE Q+ FY
Sbjct: 161 YMHEGQKTFY 170
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 FFHEQQELFY 10
F+H ELF+
Sbjct: 41 FYHSIAELFF 50
>sp|VU84_HHV7J|PROTEIN U84|Human herpesvirus 7 (strain JI)
Query: 1 FFHEQQ 6
FFHEQ+
Sbjct: 197 FFHEQK 202
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 1 FFHEQQELFY 10
FF+ +QE Y
Sbjct: 246 FFYAKQEQLY 255
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FFHEQQEL 8
F HEQQ L
Sbjct: 423 FVHEQQYL 430
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 FFHEQQELF 9
+FH +E+F
Sbjct: 363 YFHPTKEIF 371
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FFHEQQEL 8
F HEQQ L
Sbjct: 417 FVHEQQYL 424
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 FFHEQQELFY 10
++EQQ LF+
Sbjct: 757 LWNEQQPLFW 766
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 FFHEQQELFY 10
++EQQ LF+
Sbjct: 757 LWNEQQPLFW 766
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 FFHEQQELFY 10
++EQQ LF+
Sbjct: 757 LWNEQQPLFW 766
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 FFHEQQELFY 10
++EQQ LF+
Sbjct: 758 LWNEQQPLFW 767
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 FFHEQQELFY 10
++EQQ LF+
Sbjct: 758 LWNEQQPLFW 767
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 FFHEQQELFY 10
++EQQ LF+
Sbjct: 758 LWNEQQPLFW 767
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 FFHEQQELFY 10
++EQQ LF+
Sbjct: 758 LWNEQQPLFW 767
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 1 FFHEQQELFY 10
+ HE ++ FY
Sbjct: 161 YIHEGEQTFY 170
>sp|US13_HCMVM|MEMBRANE protein US13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 FHEQQELFY 10
FH Q+ L Y
Sbjct: 175 FHHQRILLY 183
>sp|US13_HCMVA|UNCHARACTERIZED protein HVLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 FHEQQELFY 10
FH Q+ L Y
Sbjct: 175 FHHQRILLY 183
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 3 HEQQELFY 10
HE+ ++FY
Sbjct: 107 HEKGQVFY 114
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 EQQELFY 10
+QQ LFY
Sbjct: 171 KQQALFY 177
>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29
Query: 1 FFHEQQELFY 10
+ HE ++FY
Sbjct: 161 YVHEDVKVFY 170
96|SequenceR|485|476|ELSAVFFHEQ
>sp|VU84_HHV7J|PROTEIN U84|Human herpesvirus 7 (strain JI)
Query: 2 LSAVFFHEQ 10
+S FFHEQ
Sbjct: 193 VSETFFHEQ 201
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 SAVFFH 8
+AVFFH
Sbjct: 257 AAVFFH 262
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SAVFFH 8
+AVFFH
Sbjct: 257 AAVFFH 262
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 3 SAVFFHEQ 10
++VFFH +
Sbjct: 426 TSVFFHNK 433
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 SAVFFHEQ 10
++VFFH +
Sbjct: 426 TSVFFHNK 433
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 3 SAVFFHEQ 10
S FFH Q
Sbjct: 1191 SEFFFHSQ 1198
>sp|IR03_HCMVA|UNCHARACTERIZED protein IRL3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 FFHEQ 10
FFHEQ
Sbjct: 12 FFHEQ 16
97|SequenceR|490|481|MQGVDELSAV
>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 QGVDELSAV 10
QG+D+L V
Sbjct: 144 QGIDQLQTV 152
>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 QGVDELSAV 10
QG+D+L V
Sbjct: 144 QGIDQLQTV 152
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 QGVDELSAV 10
+GVD LSA+
Sbjct: 325 KGVDVLSAL 333
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 QGVDELSAV 10
+GVD LSA+
Sbjct: 325 KGVDVLSAL 333
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 4 VDELSA 9
VDELSA
Sbjct: 312 VDELSA 317
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 1 MQGVDE 6
+QGVDE
Sbjct: 421 VQGVDE 426
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 QGVDEL 7
QGVD+L
Sbjct: 578 QGVDDL 583
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 2 QGVDELSAV 10
+G+D LSA+
Sbjct: 273 RGIDVLSAL 281
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 QGVDELSAV 10
+G+D LSA+
Sbjct: 273 RGIDVLSAL 281
98|SequenceR|495|486|RIQGVMQGVD
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 RIQGVMQ 7
+IQG+MQ
Sbjct: 1735 KIQGLMQ 1741
>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P
Query: 1 RIQGVMQG 8
R+QG M+G
Sbjct: 26 RVQGPMRG 33
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 IQGVMQGV 9
I+GV++GV
Sbjct: 584 IEGVVEGV 591
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 IQGVMQGV 9
I+GV++GV
Sbjct: 584 IEGVVEGV 591
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 2 IQGVMQGVD 10
++GV+QG +
Sbjct: 422 MEGVLQGTN 430
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 IQGVMQGVD 10
++GV+QG +
Sbjct: 422 MEGVLQGTN 430
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 2 IQGVMQGVD 10
++GV+QG +
Sbjct: 422 MEGVLQGTN 430
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 IQGVMQG 8
IQG +QG
Sbjct: 294 IQGTVQG 300
99|SequenceR|500|491|TDYAKRIQGV
>sp|IL10H_HCMVA|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain AD169)
Query: 2 DYAKRIQ 8
DYA R+Q
Sbjct: 41 DYATRLQ 47
>sp|IL10H_HCMVM|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 DYAKRIQ 8
DYA R+Q
Sbjct: 42 DYATRLQ 48
100|SequenceR|505|496|DQSVRTDYAK
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 QSVRTDYAK 10
QSVR Y K
Sbjct: 1728 QSVRRSYPK 1736
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 4 VRTDYAK 10
+RT+Y+K
Sbjct: 1758 IRTNYSK 1764
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 4 VRTDYAK 10
+RT+Y+K
Sbjct: 1758 IRTNYSK 1764
101|SequenceR|510|501|DLLAIDQSVR
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LLAIDQSVR 10
LLA+ +SVR
Sbjct: 521 LLAVTESVR 529
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LLAIDQSVR 10
LLA+ +SVR
Sbjct: 527 LLAVTESVR 535
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DLLAIDQ 7
DLLA+D+
Sbjct: 659 DLLALDK 665
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DLLAIDQ 7
DLLA+D+
Sbjct: 662 DLLALDK 668
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DLLAIDQ 7
DLLA+D+
Sbjct: 653 DLLALDK 659
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DLLAIDQ 7
DLLA+D+
Sbjct: 651 DLLALDK 657
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DLLAIDQ 7
DLLA+D+
Sbjct: 653 DLLALDK 659
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DLLAIDQ 7
DLLA+D+
Sbjct: 665 DLLALDK 671
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DLLAIDQ 7
DLLA+D+
Sbjct: 647 DLLALDK 653
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DLLAIDQ 7
DLLA+D+
Sbjct: 645 DLLALDK 651
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DLLAIDQ 7
DLLA+D+
Sbjct: 654 DLLALDK 660
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DLLAIDQ 7
DLLA+D+
Sbjct: 645 DLLALDK 651
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DLLAIDQ 7
DLLA+D+
Sbjct: 652 DLLALDK 658
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DLLAIDQ 7
DLLA+D+
Sbjct: 648 DLLALDK 654
>sp|ST_POVJC|SMALL t antigen|JC polyomavirus (JCPyV) (JCV)
Query: 1 DLLAIDQS 8
DLL +D+S
Sbjct: 15 DLLGLDRS 22
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 1 DLLAIDQS 8
DLL +D+S
Sbjct: 15 DLLGLDRS 22
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 2 LLAIDQSV 9
++A+DQSV
Sbjct: 1991 VVAVDQSV 1998
102|SequenceR|515|506|EGILADLLAI
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 1 EGILADLLAI 10
EG+ DLLA+
Sbjct: 664 EGVDKDLLAV 673
>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 EGILAD 6
EGI+AD
Sbjct: 150 EGIIAD 155
>sp|NEF_HV2CA|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 EGILAD 6
EGI+AD
Sbjct: 150 EGIIAD 155
103|SequenceR|520|511|EKAELEGILA
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 AELEGI 8
AELEGI
Sbjct: 90 AELEGI 95
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 AELEGI 8
AELEGI
Sbjct: 90 AELEGI 95
>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
Query: 1 EKAELEG 7
EKA++EG
Sbjct: 638 EKADIEG 644
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 EKAELEGIL 9
+KAEL+ IL
Sbjct: 1072 QKAELQAIL 1080
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 EKAELEGIL 9
+KAEL+ IL
Sbjct: 1072 QKAELQAIL 1080
>sp|PAP_HHV11|DNA polymerase processivity factor|Human herpesvirus 1 (strain 17)
Query: 1 EKAELEGIL 9
+ AEL GIL
Sbjct: 36 QGAELNGIL 44
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 AELEGI 8
AELEG+
Sbjct: 515 AELEGV 520
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 AELEGI 8
AELEG+
Sbjct: 525 AELEGV 530
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 AELEGI 8
AELEG+
Sbjct: 525 AELEGV 530
>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)
Query: 1 EKAELEGIL 9
+ AEL GIL
Sbjct: 36 QGAELNGIL 44
>sp|VP1_POVJC|MAJOR capsid protein VP1|JC polyomavirus (JCPyV) (JCV)
Query: 1 EKAELEGIL 9
E EL+G+L
Sbjct: 150 EALELQGVL 158
104|SequenceR|525|516|WESQCEKAEL
>sp|REX_HTL3P|PROTEIN Rex|Human T-cell leukemia virus 3
Query: 1 WESQCE 6
WES C+
Sbjct: 144 WESSCQ 149
>sp|REX_HTL32|PROTEIN Rex|Human T-cell leukemia virus 3
Query: 1 WESQCE 6
WES C+
Sbjct: 144 WESSCQ 149
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 1 WESQCEKAEL 10
WE QC + +
Sbjct: 217 WEGQCSNSHV 226
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 1 WESQCEKA 8
WE CE A
Sbjct: 1231 WEVGCEDA 1238
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Dumas)
Query: 1 WESQCEKA 8
WE CE A
Sbjct: 1231 WEVGCEDA 1238
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 1 WESQCE 6
W++QCE
Sbjct: 225 WKNQCE 230
>sp|MATRX_MEASB|MATRIX protein|Measles virus (strain Biken) (MeV)
Query: 1 WESQCEKAEL 10
W S+C+ A +
Sbjct: 296 WRSRCKIARI 305
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 WESQC 5
W SQC
Sbjct: 77 WPSQC 81
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 WESQC 5
W SQC
Sbjct: 78 WPSQC 82
>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 WESQC 5
W SQC
Sbjct: 78 WPSQC 82
>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus
Query: 1 WESQCEKA 8
WE +C+ A
Sbjct: 141 WEKKCDFA 148
>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain
Query: 1 WESQCE 6
W S CE
Sbjct: 317 WSSGCE 322
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 1 WESQCE 6
WE C+
Sbjct: 227 WEDHCQ 232
>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain
Query: 1 WESQCE 6
W S CE
Sbjct: 317 WSSGCE 322
>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain
Query: 1 WESQCE 6
W S CE
Sbjct: 317 WSSGCE 322
>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)
Query: 1 WESQCE 6
W S CE
Sbjct: 317 WSSGCE 322
>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)
Query: 1 WESQCE 6
W S CE
Sbjct: 317 WSSGCE 322
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 5 CEKAEL 10
CE+AEL
Sbjct: 58 CEQAEL 63
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 1 WESQCEKA 8
W + C++A
Sbjct: 770 WSNACDEA 777
105|SequenceR|530|521|DQLLEWESQC
>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43
Query: 1 DQLLEWES 8
DQ+L+W S
Sbjct: 42 DQILKWAS 49
>sp|VL2_HPVME|MINOR capsid protein L2|Human papillomavirus type ME180
Query: 1 DQLLEWES 8
D+LL+W S
Sbjct: 42 DKLLQWTS 49
>sp|PHOSP_CHAV|PHOSPHOPROTEIN virus (strain I653514) (CHPV)
Query: 2 QLLEWES 8
QLL+WE+
Sbjct: 131 QLLQWET 137
>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus
Query: 1 DQLLEWES 8
D L+EWE+
Sbjct: 286 DVLIEWEN 293
>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate
Query: 1 DQLLEWES 8
D L+EWE+
Sbjct: 286 DVLIEWEN 293
>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain Dairen
Query: 1 DQLLEWES 8
D L+EWE+
Sbjct: 283 DVLIEWEN 290
>sp|VL2_HPV6B|MINOR capsid protein L2|Human papillomavirus type 6b
Query: 1 DQLLEWES 8
DQ+L+W S
Sbjct: 42 DQILKWGS 49
>sp|VL2_HPV6A|MINOR capsid protein L2|Human papillomavirus type 6a
Query: 1 DQLLEWES 8
DQ+L+W S
Sbjct: 42 DQILKWGS 49
>sp|VL2_HPV55|MINOR capsid protein L2|Human papillomavirus type 55
Query: 1 DQLLEWES 8
DQ+L+W S
Sbjct: 42 DQILKWGS 49
>sp|VL2_HPV44|MINOR capsid protein L2|Human papillomavirus 44
Query: 1 DQLLEWES 8
DQ+L+W S
Sbjct: 42 DQILKWGS 49
>sp|VL2_HPV40|MINOR capsid protein L2|Human papillomavirus 40
Query: 1 DQLLEWES 8
DQ+L+W S
Sbjct: 42 DQILKWGS 49
>sp|VL2_HPV32|MINOR capsid protein L2|Human papillomavirus type 32
Query: 1 DQLLEWES 8
DQ+L+W S
Sbjct: 42 DQILKWGS 49
>sp|VL2_HPV11|MINOR capsid protein L2|Human papillomavirus 11
Query: 1 DQLLEWES 8
DQ+L+W S
Sbjct: 41 DQILKWGS 48
>sp|VL2_HPV07|MINOR capsid protein L2|Human papillomavirus 7
Query: 1 DQLLEWES 8
DQ+L+W S
Sbjct: 42 DQILKWGS 49
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 4 LEWESQC 10
EW+S C
Sbjct: 727 FEWQSAC 733
>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 1 DQLLEWES 8
D L+EWE+
Sbjct: 285 DVLIEWEN 292
>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)
Query: 1 DQLLEWES 8
D L+EWE+
Sbjct: 283 DVLIEWEN 290
>sp|VL2_HPV54|MINOR capsid protein L2|Human papillomavirus type 54
Query: 1 DQLLEWES 8
DQ+L W S
Sbjct: 42 DQILRWGS 49
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 DQLLEWES 8
DQ LE+ES
Sbjct: 85 DQFLEFES 92
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LEWESQC 10
L W SQC
Sbjct: 76 LGWPSQC 82
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 LEWESQC 10
L W SQC
Sbjct: 75 LGWPSQC 81
>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LEWESQC 10
L W SQC
Sbjct: 76 LGWPSQC 82
>sp|REX_HTL3P|PROTEIN Rex|Human T-cell leukemia virus 3
Query: 6 WESQC 10
WES C
Sbjct: 144 WESSC 148
>sp|REX_HTL32|PROTEIN Rex|Human T-cell leukemia virus 3
Query: 6 WESQC 10
WES C
Sbjct: 144 WESSC 148
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 6 WESQC 10
WE QC
Sbjct: 217 WEGQC 221
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 DQLLEWESQC 10
D W QC
Sbjct: 1308 DSTFHWHLQC 1317
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 5 EWESQC 10
EW S C
Sbjct: 106 EWPSYC 111
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 5 EWESQC 10
EW S C
Sbjct: 106 EWPSYC 111
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 5 EWESQC 10
EW S C
Sbjct: 106 EWPSYC 111
>sp|VE2_HPV63|REGULATORY protein E2|Human papillomavirus type 63
Query: 1 DQLLEW 6
DQ+++W
Sbjct: 28 DQIMQW 33
106|SequenceR|535|526|LIDGIDQLLE
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 IDGIDQLLE 10
+DG+ +L+E
Sbjct: 652 VDGLSRLME 660
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 2 IDGIDQ 7
IDG DQ
Sbjct: 462 IDGFDQ 467
>sp|NSS_UUKS|NON-STRUCTURAL protein NS-S|Uukuniemi virus (strain S23) (UUKV)
Query: 1 LIDGIDQL 8
LIDG+D L
Sbjct: 67 LIDGLDVL 74
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 IDGIDQLLE 10
++G +QL+E
Sbjct: 1304 VEGTEQLIE 1312
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 IDGIDQLLE 10
++G +QL+E
Sbjct: 1304 VEGTEQLIE 1312
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1149 FLDGIDKAQE 1158
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1148 FLDGIDKAQE 1157
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1143 FLDGIDKAQE 1152
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1141 FLDGIDKAQE 1150
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1146 FLDGIDKAQE 1155
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1145 FLDGIDKAQE 1154
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1145 FLDGIDKAQE 1154
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1147 FLDGIDKAQE 1156
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1145 FLDGIDKAQE 1154
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1148 FLDGIDKAQE 1157
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1143 FLDGIDKAQE 1152
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1154 FLDGIDKAQE 1163
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1153 FLDGIDKAQE 1162
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1147 FLDGIDKAQE 1156
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1152 FLDGIDKAQE 1161
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1152 FLDGIDKAQE 1161
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1148 FLDGIDKAQE 1157
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1148 FLDGIDKAQE 1157
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1160 FLDGIDKAQE 1169
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1148 FLDGIDKAQE 1157
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1143 FLDGIDKAQE 1152
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1143 FLDGIDKAQE 1152
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1143 FLDGIDKAQE 1152
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LIDGIDQLLE 10
+DGID+ E
Sbjct: 1148 FLDGIDKAQE 1157
107|SequenceR|540|531|TKARHLIDGI
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 KARHLIDGI 10
KARH+++ I
Sbjct: 277 KARHMVEAI 285
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 KARHLIDGI 10
KARH+++ I
Sbjct: 277 KARHMVEAI 285
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 3 ARHLID 8
ARHL+D
Sbjct: 58 ARHLLD 63
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 ARHLID 8
ARHL+D
Sbjct: 344 ARHLLD 349
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 4 RHLID 8
RHLID
Sbjct: 95 RHLID 99
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 4 RHLID 8
RHLID
Sbjct: 379 RHLID 383
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 RHLID 8
RHLID
Sbjct: 379 RHLID 383
>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 RHLID 8
RHLID
Sbjct: 257 RHLID 261
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 3 ARHLIDGI 10
A HLID +
Sbjct: 493 AAHLIDAL 500
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 3 ARHLIDGI 10
A HLID +
Sbjct: 493 AAHLIDAL 500
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 3 ARHLIDGI 10
A HLID +
Sbjct: 493 AAHLIDAL 500
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 ARHLIDG 9
A HL DG
Sbjct: 658 AEHLADG 664
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 ARHLIDG 9
A HL DG
Sbjct: 658 AEHLADG 664
>sp|NSS_ANDV|NON-STRUCTURAL protein NS-S|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 TKARHLIDG 9
T+A + IDG
Sbjct: 14 TRAHYKIDG 22
108|SequenceR|545|536|EPVPVTKARH
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 EPVPVT 6
EPVP+T
Sbjct: 2074 EPVPLT 2079
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 VPVTKAR 9
VPV++AR
Sbjct: 725 VPVSRAR 731
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 2 PVPVTKAR 9
P PVTK +
Sbjct: 32 PAPVTKYK 39
>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 2 PVPVTKAR 9
P PVTK +
Sbjct: 32 PAPVTKYK 39
>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)
Query: 3 VPVTKARH 10
+P+ K RH
Sbjct: 278 IPLCKGRH 285
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 PVPVT 6
PVPVT
Sbjct: 348 PVPVT 352
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PVPVT 6
PVPVT
Sbjct: 348 PVPVT 352
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 2 PVPVT 6
PVPVT
Sbjct: 348 PVPVT 352
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 VTKARH 10
VT+ARH
Sbjct: 337 VTRARH 342
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 VTKARH 10
VT+ARH
Sbjct: 337 VTRARH 342
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 VTKARH 10
VT+ARH
Sbjct: 337 VTRARH 342
>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)
Query: 1 EPVPVTK 7
EP PVTK
Sbjct: 295 EPPPVTK 301
109|SequenceR|550|541|PTTWKEPVPV
>sp|NEC1_HHV6Z|NUCLEAR egress protein 1|Human herpesvirus 6B (strain Z29)
Query: 1 PTTWKEPVPV 10
P T KEP+ V
Sbjct: 62 PITGKEPIDV 71
>sp|NEC1_HHV6U|NUCLEAR egress protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PTTWKEPVPV 10
P T KEP+ V
Sbjct: 62 PITGKEPIDV 71
>sp|NEC1_HHV6H|NUCLEAR egress protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 1 PTTWKEPVPV 10
P T KEP+ V
Sbjct: 62 PITGKEPIDV 71
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 PTTWKEPV 8
P TWKE +
Sbjct: 1368 PETWKEMI 1375
>sp|NEC1_HHV7J|NUCLEAR egress protein 1|Human herpesvirus 7 (strain JI)
Query: 1 PTTWKEPVPV 10
P T KEP+ +
Sbjct: 59 PITGKEPIKI 68
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 4 WKEPVPV 10
WKEP+ V
Sbjct: 317 WKEPIIV 323
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 4 WKEPVPV 10
WKEP+ V
Sbjct: 317 WKEPIIV 323
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 1 PTTWKEPV 8
PTTW+ +
Sbjct: 812 PTTWESEI 819
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PTTWKEP 7
P+ W+EP
Sbjct: 625 PSPWQEP 631
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PTTWKEPVPV 10
P T EP+P+
Sbjct: 198 PKTTFEPIPI 207
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 PTTWKEP 7
PTT+K P
Sbjct: 71 PTTFKPP 77
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 PTTWKEP 7
PTT+K P
Sbjct: 71 PTTFKPP 77
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PTTWKEPVPV 10
P T EP+P+
Sbjct: 199 PKTSFEPIPI 208
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 PTTWKEP 7
PTT+K P
Sbjct: 71 PTTFKPP 77
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 4 WKEPVPV 10
WKEP V
Sbjct: 317 WKEPTVV 323
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 4 WKEPVPV 10
WKEP V
Sbjct: 317 WKEPTIV 323
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 TWKEPV 8
+WK PV
Sbjct: 1083 SWKRPV 1088
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 4 WKEPVPV 10
WKEP V
Sbjct: 317 WKEPTIV 323
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 4 WKEPVPV 10
W+ P PV
Sbjct: 611 WQAPCPV 617
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 4 WKEP 7
WKEP
Sbjct: 317 WKEP 320
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 4 WKEP 7
WKEP
Sbjct: 317 WKEP 320
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 4 WKEP 7
WKEP
Sbjct: 317 WKEP 320
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 4 WKEP 7
WKEP
Sbjct: 317 WKEP 320
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 4 WKEP 7
WKEP
Sbjct: 317 WKEP 320
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 4 WKEP 7
WKEP
Sbjct: 317 WKEP 320
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 4 WKEP 7
WKEP
Sbjct: 317 WKEP 320
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 4 WKEPVPV 10
WKEP V
Sbjct: 317 WKEPYVV 323
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 4 WKEPVPV 10
WKEP V
Sbjct: 317 WKEPYVV 323
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 4 WKEP 7
WKEP
Sbjct: 317 WKEP 320
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 4 WKEPVPV 10
WKEP V
Sbjct: 317 WKEPYVV 323
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 4 WKEP 7
WKEP
Sbjct: 317 WKEP 320
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 4 WKEPVPV 10
WKEP V
Sbjct: 317 WKEPYVV 323
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 4 WKEPVPV 10
WKEP V
Sbjct: 317 WKEPYVV 323
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 4 WKEPVPV 10
WKEP V
Sbjct: 317 WKEPYVV 323
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 4 WKEPVPV 10
WKEP V
Sbjct: 317 WKEPYVV 323
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 3 TWKEPVPV 10
T+K P PV
Sbjct: 619 TFKNPFPV 626
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 4 WKEPVPV 10
WKEP V
Sbjct: 317 WKEPYVV 323
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 4 WKEP 7
WKEP
Sbjct: 317 WKEP 320
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 4 WKEP 7
WKEP
Sbjct: 317 WKEP 320
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 4 WKEP 7
WKEP
Sbjct: 317 WKEP 320
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 4 WKEP 7
WKEP
Sbjct: 317 WKEP 320
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 4 WKEP 7
WKEP
Sbjct: 317 WKEP 320
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 4 WKEP 7
WKEP
Sbjct: 317 WKEP 320
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 4 WKEP 7
WKEP
Sbjct: 317 WKEP 320
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 4 WKEP 7
WKEP
Sbjct: 317 WKEP 320
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 4 WKEP 7
WKEP
Sbjct: 317 WKEP 320
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 4 WKEPVPV 10
WKEP V
Sbjct: 317 WKEPYVV 323
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 4 WKEPVPV 10
WKEP V
Sbjct: 317 WKEPYVV 323
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 4 WKEPVPV 10
WKEP V
Sbjct: 317 WKEPYVV 323
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 4 WKEPVPV 10
WKEP V
Sbjct: 317 WKEPYVV 323
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 4 WKEP 7
WKEP
Sbjct: 317 WKEP 320
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 4 WKEPVPV 10
WKEP V
Sbjct: 317 WKEPYVV 323
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 4 WKEP 7
WKEP
Sbjct: 317 WKEP 320
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 4 WKEPVPV 10
WKEP V
Sbjct: 317 WKEPYVV 323
>sp|GQ2_HHV6U|GLYCOPROTEIN Q2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PTTWKEP 7
P+ W+EP
Sbjct: 183 PSPWQEP 189
>sp|VIE3_HCMVT|30 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 1 PTTWKEPVP 9
P++W P P
Sbjct: 272 PSSWSTPCP 280
>sp|US18_HCMVT|TRANSMEMBRANE protein HWLF5|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 PTTWK 5
PT WK
Sbjct: 160 PTRWK 164
>sp|US18_HCMVM|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PTTWK 5
PT WK
Sbjct: 160 PTRWK 164
>sp|US18_HCMVA|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PTTWK 5
PT WK
Sbjct: 160 PTRWK 164
>sp|NEP_INCGL|NUCLEAR export protein|Influenza C virus (strain C/Great
Query: 1 PTTWKEPV 8
P TW++ +
Sbjct: 48 PRTWEDAI 55
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WKEP 7
WKEP
Sbjct: 46 WKEP 49
110|SequenceR|555|546|QKIEQPTTWK
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 QKIEQP 6
QK+EQP
Sbjct: 1439 QKVEQP 1444
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 QKIEQP 6
QK+EQP
Sbjct: 1439 QKVEQP 1444
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 QKIEQPTT 8
Q IEQPTT
Sbjct: 630 QWIEQPTT 637
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 2 KIEQPTTWK 10
+I++P WK
Sbjct: 308 EIDEPEAWK 316
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 2 KIEQPTTWK 10
+I++P WK
Sbjct: 308 EIDEPEAWK 316
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 2 KIEQPTTWK 10
+I++P WK
Sbjct: 308 EIDEPEAWK 316
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 2 KIEQPTTWK 10
+I++P WK
Sbjct: 308 EIDEPEAWK 316
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 2 KIEQPTTWK 10
+I++P WK
Sbjct: 308 EIDEPEAWK 316
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 1 QKIEQPTTWK 10
+ +E PT W+
Sbjct: 90 EPLENPTLWR 99
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 2 KIEQPTTW 9
++++PTTW
Sbjct: 473 ELKKPTTW 480
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 QKIEQPTT 8
Q +EQPT+
Sbjct: 764 QPLEQPTS 771
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 QKIEQPTT 8
Q +EQPT+
Sbjct: 764 QPLEQPTS 771
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 1 QKIEQPTTWK 10
QK+ + TWK
Sbjct: 467 QKLGKQVTWK 476
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 5 QPTTW 9
QPT+W
Sbjct: 218 QPTSW 222
Query: 3 IEQPTTWK 10
+++PT W+
Sbjct: 475 LKKPTVWR 482
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 2 KIEQPTTW 9
K QPTTW
Sbjct: 646 KYIQPTTW 653
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 5 QPTTW 9
QPTTW
Sbjct: 650 QPTTW 654
>sp|VE6_HPV47|PROTEIN E6|Human papillomavirus 47
Query: 1 QKIEQPTT 8
+K+E PTT
Sbjct: 14 EKLELPTT 21
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 2 KIEQPTTWK 10
KIE TWK
Sbjct: 418 KIEDGGTWK 426
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 3 IEQPTTWK 10
I+ PT+W+
Sbjct: 185 IQYPTSWQ 192
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 5 QPTTW 9
QPTTW
Sbjct: 652 QPTTW 656
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 3 IEQPTTWK 10
I+ PT+W+
Sbjct: 185 IQYPTSWQ 192
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 4 EQPTTW 9
E P TW
Sbjct: 330 ESPDTW 335
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 1 QKIEQPTTWK 10
+KIE+ WK
Sbjct: 429 KKIEEAGNWK 438
>sp|US18_HCMVT|TRANSMEMBRANE protein HWLF5|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 6 PTTWK 10
PT WK
Sbjct: 160 PTRWK 164
>sp|US18_HCMVM|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 PTTWK 10
PT WK
Sbjct: 160 PTRWK 164
>sp|US18_HCMVA|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 PTTWK 10
PT WK
Sbjct: 160 PTRWK 164
>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)
Query: 4 EQPTTWK 10
+QP WK
Sbjct: 301 KQPLLWK 307
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 6 PTTW 9
PTTW
Sbjct: 47 PTTW 50
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 3 IEQPTTWK 10
I+ PT W+
Sbjct: 185 IQYPTAWQ 192
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 3 IEQPTTWK 10
I+ PT W+
Sbjct: 185 IQYPTAWQ 192
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 QKIEQPTTWK 10
+ +E P WK
Sbjct: 2937 EAVEDPEFWK 2946
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 5 QPTTWK 10
QPTT+K
Sbjct: 70 QPTTFK 75
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 5 QPTTWK 10
QPTT+K
Sbjct: 70 QPTTFK 75
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 5 QPTTWK 10
QPTT+K
Sbjct: 70 QPTTFK 75
111|SequenceR|560|551|LLQIKQKIEQ
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 LQIKQKIEQ 10
L+I+QK+E+
Sbjct: 364 LRIRQKVEE 372
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 LQIKQKIEQ 10
L+I+QK+E+
Sbjct: 364 LRIRQKVEE 372
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 LQIKQKIEQ 10
L+I+QK+E+
Sbjct: 364 LRIRQKVEE 372
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 LLQIKQKIE 9
L+QI++K+E
Sbjct: 666 LVQIRRKME 674
112|SequenceR|565|556|ESKQHLLQIK
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 559 EAQQHLLQL 567
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 560 EAQQHLLQL 568
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 556 EAQQHLLQL 564
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 547 EAQQHLLQL 555
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 562 EAQQHLLQL 570
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 546 EAQQHLLQL 554
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 536 EAQQHLLQL 544
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 569 EAQQHLLQL 577
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 550 EAQQHLLQL 558
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 559 EAQQHLLQL 567
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 557 EAQQHLLQL 565
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 531 EAQQHLLQL 539
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 558 EAQQHLLQL 566
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 538 EAQQHLLQL 546
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 557 EAQQHLLQL 565
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 560 EAQQHLLQL 568
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 559 EAQQHLLQL 567
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 565 EAQQHLLQL 573
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 560 EAQQHLLQL 568
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 560 EAQQHLLQL 568
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 547 EAQQHLLQL 555
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 551 EAQQHLLQL 559
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 554 EAQQHLLQL 562
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 560 EAQQHLLQL 568
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 550 EAQQHLLQL 558
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 546 EAQQHLLQL 554
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QHLLQ+
Sbjct: 560 EAQQHLLQL 568
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QH+LQ+
Sbjct: 557 EAQQHMLQL 565
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QH+LQ+
Sbjct: 553 EAQQHMLQL 561
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E +QHLLQ+
Sbjct: 571 EGQQHLLQL 579
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E +QHLLQ+
Sbjct: 555 EGQQHLLQL 563
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QH+LQ+
Sbjct: 567 EAQQHMLQL 575
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QH+LQ+
Sbjct: 548 EAQQHMLQL 556
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QH+LQ+
Sbjct: 561 EAQQHMLQL 569
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
E++QH+LQ+
Sbjct: 552 EAQQHMLQL 560
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
+++QHLLQ+
Sbjct: 551 DAQQHLLQL 559
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
+++QHLLQ+
Sbjct: 566 DAQQHLLQL 574
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
+++QH+LQ+
Sbjct: 549 QARQHMLQL 557
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
+++QHLLQ+
Sbjct: 572 KAQQHLLQL 580
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ESKQHLLQI 9
+++QH+LQ+
Sbjct: 563 QAQQHMLQL 571
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 1 ESKQHLLQIK 10
E ++HL QI+
Sbjct: 488 EKRRHLYQIR 497
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 4 QHLLQIK 10
+HLLQIK
Sbjct: 550 KHLLQIK 556
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 4 QHLLQIK 10
+HL+QIK
Sbjct: 554 RHLIQIK 560
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 4 QHLLQIK 10
+HL+QIK
Sbjct: 546 RHLVQIK 552
113|SequenceR|570|561|SKEVFESKQH
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 SKEVFESKQ 9
SKEVFE +Q
Sbjct: 334 SKEVFELEQ 342
114|SequenceR|575|566|SFYKTSKEVF
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 FYKTSKEVF 10
FY T EVF
Sbjct: 497 FYYTRHEVF 505
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 FYKTSKEVF 10
FY T EVF
Sbjct: 497 FYYTRHEVF 505
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 FYKTSKEVF 10
FY T EVF
Sbjct: 497 FYYTRHEVF 505
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 2 FYKTSK 7
F+KTSK
Sbjct: 185 FFKTSK 190
>sp|VE2_HPV63|REGULATORY protein E2|Human papillomavirus type 63
Query: 1 SFYKTSKEVF 10
S TS+E+F
Sbjct: 93 SLQDTSREIF 102
115|SequenceR|580|571|SRLTESFYKT
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 RLTESFYKT 10
R E+FY T
Sbjct: 839 RFPEAFYST 847
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 RLTESFYKT 10
R E+FY T
Sbjct: 839 RFPEAFYPT 847
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 SRLTESFYKT 10
S LTE FY +
Sbjct: 1266 SSLTEEFYHS 1275
>sp|VA54_VACCC|PROTEIN A54|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 LTESFYKT 10
+T+SF+KT
Sbjct: 40 ITKSFFKT 47
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 4 TESFYKT 10
TE FYK+
Sbjct: 518 TEDFYKS 524
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 5 ESFYK 9
ESFYK
Sbjct: 5341 ESFYK 5345
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 ESFYK 9
ESFYK
Sbjct: 5371 ESFYK 5375
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 ESFYK 9
ESFYK
Sbjct: 5321 ESFYK 5325
116|SequenceR|585|576|FMEMESRLTE
>sp|SCAF_HHV8P|CAPSID scaffolding protein|Human herpesvirus 8 type P
Query: 1 FMEMESRLTE 10
F+E+ SRL +
Sbjct: 76 FLELASRLAD 85
117|SequenceR|590|581|LEPVNFMEME
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LEPVNFMEME 10
+EPV F +ME
Sbjct: 971 VEPVVFSQME 980
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 LEPVNFMEME 10
+EPV F +ME
Sbjct: 971 VEPVVFSQME 980
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LEPVNFMEME 10
+EPV F +ME
Sbjct: 971 VEPVVFSDME 980
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LEPVNFMEME 10
+EPV F +ME
Sbjct: 971 VEPVVFSDME 980
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LEPVNFMEME 10
+EPV F +ME
Sbjct: 971 VEPVVFSDME 980
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LEPVNFMEME 10
+EPV F +ME
Sbjct: 971 VEPVVFSDME 980
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LEPVNFMEME 10
+EPV F +ME
Sbjct: 971 VEPVVFSDME 980
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LEPVNFMEME 10
+EPV F +ME
Sbjct: 971 VEPVVFSDME 980
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 EPVNFMEME 10
EP++ +EME
Sbjct: 1412 EPLSLLEME 1420
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 EPVNFMEME 10
EP++ +EME
Sbjct: 1412 EPLSLLEME 1420
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 EPVNFMEME 10
EP++ +EME
Sbjct: 1412 EPLSLLEME 1420
>sp|PG091_VARV|PROTEIN OPG091|Variola virus
Query: 1 LEPVNFME 8
++PVNF++
Sbjct: 1 MDPVNFIK 8
>sp|PG091_VAR67|PROTEIN OPG091|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LEPVNFME 8
++PVNF++
Sbjct: 1 MDPVNFIK 8
>sp|PG091_VACCC|PROTEIN OPG091|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LEPVNFME 8
++PVNF++
Sbjct: 1 MDPVNFIK 8
>sp|PG091_MONPV|PROTEIN OPG091|Monkeypox virus (MPXV)
Query: 1 LEPVNFME 8
++PVNF++
Sbjct: 1 MDPVNFIK 8
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 EPVNFM 7
EPV+FM
Sbjct: 1879 EPVSFM 1884
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 EPVNFM 7
EPV+FM
Sbjct: 1879 EPVSFM 1884
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 LEPVNFME 8
L PVNF +
Sbjct: 777 LNPVNFQQ 784
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 2 EPVNF 6
EPVNF
Sbjct: 352 EPVNF 356
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 LEPVNFME 8
L P+NF +
Sbjct: 780 LNPINFQQ 787
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 EPVNFMEME 10
+P+ FM+ E
Sbjct: 931 KPITFMDAE 939
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 EPVNFMEME 10
+P+ FM+ E
Sbjct: 804 KPITFMDAE 812
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LEPVNFME 8
L+P+N+ +
Sbjct: 711 LQPINYFD 718
118|SequenceR|595|586|AQAGILEPVN
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 1 AQAGILEPV 9
+Q GI++P+
Sbjct: 58 SQQGIIQPI 66
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 1 AQAGILEPV 9
+Q GI++P+
Sbjct: 58 SQQGIIQPI 66
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 GILEPVN 10
G++EPV+
Sbjct: 5386 GVMEPVD 5392
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 1 AQAGILEPV 9
AQA ++EP+
Sbjct: 925 AQADLVEPL 933
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 4 GILEPVN 10
GI+ PVN
Sbjct: 436 GIIPPVN 442
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 4 GILEPVN 10
GI+ PVN
Sbjct: 436 GIIPPVN 442
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 4 GILEPVN 10
GI+ PVN
Sbjct: 436 GIIPPVN 442
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 4 GILEPVN 10
GI+ PVN
Sbjct: 436 GIIPPVN 442
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 4 GILEPVN 10
GI+ PVN
Sbjct: 436 GIIPPVN 442
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 QAGILEPVN 10
GI+EP++
Sbjct: 1544 HCGIIEPIH 1552
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 QAGILEPVN 10
GI+EP++
Sbjct: 1544 HCGIIEPIH 1552
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 QAGILEPVN 10
GI+EP++
Sbjct: 1544 HCGIIEPIH 1552
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 GILEPVN 10
G++EP++
Sbjct: 5411 GVMEPID 5417
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 AGILEPV 9
AGI++PV
Sbjct: 2748 AGIVDPV 2754
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 4 GILEPVN 10
G++ PVN
Sbjct: 436 GVIPPVN 442
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 4 GILEPVN 10
G++ PVN
Sbjct: 436 GVIPPVN 442
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 4 GILEPVN 10
G++ PVN
Sbjct: 436 GVIPPVN 442
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 4 GILEPVN 10
G++ PVN
Sbjct: 436 GVIPPVN 442
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 4 GILEPVN 10
G++ PVN
Sbjct: 436 GVIPPVN 442
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 4 GILEPVN 10
G++ PVN
Sbjct: 436 GVIPPVN 442
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 4 GILEPVN 10
G++ PVN
Sbjct: 436 GVIPPVN 442
119|SequenceR|600|591|VNVAHAQAGI
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 2 NVAHAQAG 9
N+AHA+ G
Sbjct: 133 NIAHAENG 140
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 1 VNVAHAQA 8
VNV++AQA
Sbjct: 55 VNVSNAQA 62
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 VNVAHA 6
VN+AHA
Sbjct: 2637 VNIAHA 2642
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 VNVAHA 6
VN+AHA
Sbjct: 2657 VNIAHA 2662
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 VNVAHA 6
VN+AHA
Sbjct: 2687 VNIAHA 2692
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 VNVAHA 6
VN+AHA
Sbjct: 2637 VNIAHA 2642
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 VNVAHA 6
VN+AHA
Sbjct: 2657 VNIAHA 2662
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 VNVAHA 6
VN+AHA
Sbjct: 2687 VNIAHA 2692
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 5 HAQAG 9
HAQAG
Sbjct: 370 HAQAG 374
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 4 AHAQAG 9
AHA+AG
Sbjct: 502 AHARAG 507
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 3 VAHAQAG 9
VAH +AG
Sbjct: 743 VAHLEAG 749
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 3 VAHAQAG 9
VAH +AG
Sbjct: 743 VAHLEAG 749
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 3 VAHAQAG 9
VAH +AG
Sbjct: 743 VAHLEAG 749
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 3 VAHAQAG 9
VAH +AG
Sbjct: 743 VAHLEAG 749
120|SequenceR|605|596|EADLIVNVAH
>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate
Query: 2 ADLIVNVAH 10
+DL +NVA+
Sbjct: 196 SDLFINVAY 204
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 2 ADLIVNVAH 10
AD++VNV+
Sbjct: 238 ADVLVNVSQ 246
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 EADLIVNVAH 10
+AD+IVN A+
Sbjct: 1329 KADVIVNPAN 1338
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 EADLIVNVAH 10
+AD+IVN A+
Sbjct: 1379 KADVIVNPAN 1388
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 EADLIVNVAH 10
EA++++N H
Sbjct: 3133 EAEMVINHQH 3142
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 EADLIVNVAH 10
EA++++N H
Sbjct: 3133 EAEMVINHQH 3142
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 EADLIVNVAH 10
EA++++N H
Sbjct: 3133 EAEMVINHQH 3142
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 EADLIVNVAH 10
+AD+IVN A+
Sbjct: 1349 KADVIVNPAN 1358
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 3 DLIVNVAH 10
DL+ N+AH
Sbjct: 1379 DLLDNIAH 1386
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 EADLIVNVAH 10
+AD+IVN A+
Sbjct: 1349 KADVIVNPAN 1358
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 EADLIVNVAH 10
+AD+IVN A+
Sbjct: 1329 KADVIVNPAN 1338
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 EADLIVNVAH 10
+AD+IVN A+
Sbjct: 1379 KADVIVNPAN 1388
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 EADLIVN 7
EAD +VN
Sbjct: 365 EADTVVN 371
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 EADLIVN 7
EAD +VN
Sbjct: 365 EADTVVN 371
121|SequenceR|610|601|NPYATEADLI
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 3 YATEADLI 10
YATE DLI
Sbjct: 291 YATEVDLI 298
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 3 YATEADLI 10
YATE DLI
Sbjct: 291 YATEVDLI 298
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 3 YATEADLI 10
YATE DLI
Sbjct: 291 YATEVDLI 298
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 NPYATEADLI 10
NP ++E D+I
Sbjct: 30 NPSSSEVDMI 39
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 NPYATEADLI 10
NP ++E D+I
Sbjct: 30 NPSSSEVDMI 39
>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 NPYATEA 7
NPY TE+
Sbjct: 183 NPYPTES 189
>sp|PG049_VACCC|PROTEIN OPG049|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NPYATEA 7
NPY TE+
Sbjct: 183 NPYPTES 189
>sp|PG049_MONPV|PROTEIN OPG049|Monkeypox virus (MPXV)
Query: 1 NPYATEA 7
NPY TE+
Sbjct: 182 NPYPTES 188
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 PYATEAD 8
PY EAD
Sbjct: 346 PYTGEAD 352
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 2 PYATEAD 8
PY EAD
Sbjct: 346 PYTGEAD 352
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 2 PYATEAD 8
PY EAD
Sbjct: 346 PYTGEAD 352
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 2 PYATEAD 8
PY EAD
Sbjct: 346 PYTGEAD 352
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 NPYATEADLI 10
NP +TE LI
Sbjct: 2008 NPESTEVYLI 2017
122|SequenceR|615|606|DSFILNPYAT
>sp|ICP47_HSV2S|ICP47 protein|Herpes simplex virus type 2
Query: 1 DSFILNPY 8
D+F+ NP+
Sbjct: 10 DAFLRNPH 17
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 DSFILNPYAT 10
D+FILN + +
Sbjct: 474 DNFILNEFGS 483
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 DSFILNPYAT 10
D+FILN + +
Sbjct: 474 DNFILNEFGS 483
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 ILNPY 8
ILNPY
Sbjct: 2674 ILNPY 2678
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 ILNPY 8
ILNPY
Sbjct: 2673 ILNPY 2677
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 ILNPY 8
ILNPY
Sbjct: 2674 ILNPY 2678
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DSFILNP 7
D F LNP
Sbjct: 42 DRFALNP 48
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DSFILNP 7
D F LNP
Sbjct: 42 DRFALNP 48
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 DSFILNP 7
D F LNP
Sbjct: 42 DRFALNP 48
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 DSFILNP 7
D F LNP
Sbjct: 42 DRFALNP 48
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 LNPYA 9
LNPYA
Sbjct: 672 LNPYA 676
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 LNPYA 9
LNPYA
Sbjct: 672 LNPYA 676
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 ILNPY 8
+LNPY
Sbjct: 2669 VLNPY 2673
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 ILNPY 8
+LNPY
Sbjct: 2669 VLNPY 2673
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 ILNPY 8
+LNPY
Sbjct: 2669 VLNPY 2673
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 ILNPY 8
+LNPY
Sbjct: 2669 VLNPY 2673
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 ILNPY 8
+LNPY
Sbjct: 2669 VLNPY 2673
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 ILNPY 8
+LNPY
Sbjct: 2671 VLNPY 2675
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 ILNPY 8
+LNPY
Sbjct: 2671 VLNPY 2675
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 ILNPY 8
+LNPY
Sbjct: 2671 VLNPY 2675
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 ILNPY 8
+LNPY
Sbjct: 2671 VLNPY 2675
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 ILNPY 8
+LNPY
Sbjct: 2671 VLNPY 2675
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 ILNPY 8
+LNPY
Sbjct: 2673 VLNPY 2677
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 ILNPY 8
+LNPY
Sbjct: 2670 VLNPY 2674
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 ILNPY 8
+LNPY
Sbjct: 2673 VLNPY 2677
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 ILNPY 8
+LNPY
Sbjct: 2673 VLNPY 2677
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 ILNPY 8
+LNPY
Sbjct: 2673 VLNPY 2677
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 ILNPY 8
+LNPY
Sbjct: 2673 VLNPY 2677
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 ILNPY 8
+LNPY
Sbjct: 2673 VLNPY 2677
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 4 ILNPY 8
ILNPY
Sbjct: 2151 ILNPY 2155
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 4 ILNPYAT 10
+LNP++T
Sbjct: 1913 LLNPFST 1919
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 4 ILNPYAT 10
+LNP++T
Sbjct: 1913 LLNPFST 1919
123|SequenceR|620|611|VSKLDDSFIL
>sp|CEP1_HHV11|CYTOPLASMIC envelopment protein 1|Human herpesvirus 1 (strain 17)
Query: 1 VSKLDDSFIL 10
V DD F+L
Sbjct: 202 VKPFDDEFVL 211
>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 KLDDSFI 9
K+DD FI
Sbjct: 426 KVDDGFI 432
>sp|PG027_VARV|INTERFERON antagonist OPG027|Variola virus
Query: 1 VSKLDDSF 8
V+K+DD+F
Sbjct: 72 VNKVDDTF 79
>sp|PG027_VAR67|INTERFERON antagonist OPG027|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 VSKLDDSF 8
V+K+DD+F
Sbjct: 72 VNKVDDTF 79
>sp|PG027_VACCC|INTERFERON antagonist OPG027|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VSKLDDSF 8
V+K+DD+F
Sbjct: 72 VNKVDDTF 79
>sp|PG027_VACCA|INTERFERON antagonist OPG027|Vaccinia virus (strain Ankara) (VACV)
Query: 1 VSKLDDSF 8
V+K+DD+F
Sbjct: 72 VNKVDDTF 79
124|SequenceR|625|616|KNGLRVSKLD
>sp|VL2_HPV34|MINOR capsid protein L2|Human papillomavirus type 34
Query: 1 KNGLRVSKL 9
K G+RVS+L
Sbjct: 300 KTGIRVSRL 308
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 KNGLRVSK 8
KN LRVS+
Sbjct: 592 KNALRVSQ 599
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KNGLRVSKLD 10
+NGLRV D
Sbjct: 485 ENGLRVRNCD 494
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KNGLRVSKLD 10
+NGLRV D
Sbjct: 485 ENGLRVRNCD 494
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 1 KNGLRVSK 8
+NG RVS+
Sbjct: 636 RNGYRVSR 643
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 3 GLRVSKL 9
GLRVSK+
Sbjct: 477 GLRVSKM 483
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 3 GLRVSKL 9
GLRVSK+
Sbjct: 477 GLRVSKM 483
>sp|DUT_HCMVM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 1 KNGLRVSKLD 10
++GL+V +LD
Sbjct: 170 ESGLQVPQLD 179
>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GVRVSKM 483
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GIRVSKM 483
>sp|PB2S1_I18A0|PB2-S1 A virus (strain A/Brevig
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GVRVSKM 483
>sp|PB2S1_I96A0|PB2-S1 A virus (strain A/Goose/Guangdong/1/1996
Query: 3 GLRVSKL 9
G+RVSK+
Sbjct: 477 GVRVSKM 483
125|SequenceR|630|621|PLREWKNGLR
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 PLREW-KNGLR 10
PLR+W NGLR
Sbjct: 955 PLRDWAHNGLR 965
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2916 PLRAWRHRAR 2925
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PLREW-KNGLR 10
PLR+W NGLR
Sbjct: 955 PLRDWAHNGLR 965
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2916 PLRAWRHRAR 2925
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 PLREW-KNGLR 10
PLR+W NGLR
Sbjct: 955 PLRDWAHNGLR 965
Query: 1 PLREWKN 7
PLR W++
Sbjct: 2916 PLRAWRH 2922
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 LREWKNGL 9
+REW NG+
Sbjct: 1579 MREWLNGV 1586
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 PLREWKNGLR 10
PLR WK+ R
Sbjct: 2938 PLRAWKSRAR 2947
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 PLREWKNGLR 10
PLR WK+ R
Sbjct: 2938 PLRAWKSRAR 2947
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 PLREWKNGLR 10
PLR WK+ R
Sbjct: 2938 PLRAWKSRAR 2947
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 PLREWKNGLR 10
PLR WK+ R
Sbjct: 2942 PLRAWKSRAR 2951
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 PLREWKNGLR 10
PLR WK+ R
Sbjct: 2938 PLRAWKSRAR 2947
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PLREW-KNGLR 10
PLR+W + GLR
Sbjct: 955 PLRDWPRAGLR 965
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2915 PLRVWRHRAR 2924
>sp|NSP4_ROTHD|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 2 LREWKNG 8
L EW+NG
Sbjct: 156 LEEWENG 162
>sp|NSP4_ROTH5|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 2 LREWKNG 8
L EW+NG
Sbjct: 156 LEEWENG 162
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PLREWKN-GLR 10
PLR+W + GLR
Sbjct: 955 PLRDWAHAGLR 965
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2915 PLRVWRHRAR 2924
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PLREWKN-GLR 10
PLR+W + GLR
Sbjct: 955 PLRDWAHAGLR 965
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2915 PLRTWRHRAR 2924
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PLREWKN-GLR 10
PLR+W + GLR
Sbjct: 955 PLRDWAHAGLR 965
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2915 PLRVWRHRAR 2924
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PLREWKN-GLR 10
PLR+W + GLR
Sbjct: 955 PLRDWAHAGLR 965
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2915 PLRVWRHRAR 2924
>sp|NSP4_ROTH7|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate RVA/Human/United
Query: 2 LREWKNG 8
L EWK+G
Sbjct: 156 LEEWKSG 162
>sp|NSP4_ROTH2|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 2 LREWKNG 8
L EWK+G
Sbjct: 156 LEEWKSG 162
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 PLREWKNGLR 10
PLR WK+ R
Sbjct: 2938 PLRVWKSRAR 2947
>sp|NSP4_ROT41|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate
Query: 2 LREWKNG 8
L EW+NG
Sbjct: 156 LDEWENG 162
>sp|U148B_HCMVM|PROTEIN UL148B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LREWKNGL 9
+R W++GL
Sbjct: 49 IRRWRHGL 56
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 5 WKNGLR 10
WK+GLR
Sbjct: 158 WKHGLR 163
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 WKNGLR 10
WK+GLR
Sbjct: 158 WKHGLR 163
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2920 PLRAWRHRAR 2929
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2924 PLRAWRHRAR 2933
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2921 PLRAWRHRAR 2930
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2915 PLRAWRHRAR 2924
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2927 PLRAWRHRAR 2936
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2918 PLRAWRHRAR 2927
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2919 PLRAWRHRAR 2928
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2926 PLRAWRHRAR 2935
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2913 PLRAWRHRAR 2922
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2924 PLRAWRHRAR 2933
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2928 PLRAWRHRAR 2937
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2926 PLRAWRHRAR 2935
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2919 PLRAWRHRAR 2928
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2916 PLRAWRHRAR 2925
Query: 1 PLREWKNG 8
PL++W +G
Sbjct: 955 PLQDWAHG 962
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2916 PLRAWRHRAR 2925
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2924 PLRAWRHRAR 2933
>sp|PG005_VACCC|PROTEIN OPG005|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PLREWK 6
PL++WK
Sbjct: 11 PLKKWK 16
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PLREWKNGLR 10
PLR W++ R
Sbjct: 2915 PLRVWRHRAR 2924
>sp|TAX_HTL1L|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 LREWKNGL 9
L W+NGL
Sbjct: 226 LTAWQNGL 233
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PLREWKNGLR 10
P R W+ G R
Sbjct: 172 PYRTWRMGYR 181
>sp|UL124_HCMVM|UNCHARACTERIZED protein UL124|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PLREWKNG 8
PL W+ G
Sbjct: 114 PLEAWEQG 121
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 LREWKNG 8
L+ W+NG
Sbjct: 1326 LKTWRNG 1332
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 LREWKNG 8
L+ W+NG
Sbjct: 1326 LKTWRNG 1332
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 LREWKNG 8
L+ W+NG
Sbjct: 1326 LKTWRNG 1332
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 LREWKNG 8
L+ W+NG
Sbjct: 1326 LKTWRNG 1332
>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 LREWKNGL 9
L W+NGL
Sbjct: 227 LTAWQNGL 234
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 LREWKNGL 9
L W+NGL
Sbjct: 227 LTAWQNGL 234
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 LREWKNG 8
L+ W+NG
Sbjct: 1326 LKTWRNG 1332
>sp|VP6_ROTH6|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 PLREWKNGL 9
P+R W G
Sbjct: 55 PIRNWNFGF 63
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 EWKNGL 9
EW++GL
Sbjct: 329 EWRDGL 334
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 EWKNGL 9
EW++GL
Sbjct: 329 EWRDGL 334
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 1 PLREWKNGL 9
P+R +KN L
Sbjct: 85 PVRTYKNEL 93
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 PLREWKN 7
P+REW +
Sbjct: 3338 PVREWTD 3344
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 PLREWKNGLR 10
P+R NGLR
Sbjct: 377 PVRPVFNGLR 386
Query: 1 PLREWKN 7
PL WK+
Sbjct: 969 PLNPWKS 975
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 PLREWKNGLR 10
P+R NGLR
Sbjct: 377 PVRPVFNGLR 386
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 PLREWKNGLR 10
P+R NGLR
Sbjct: 377 PVRPVFNGLR 386
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 PLREWKNGLR 10
P+R NGLR
Sbjct: 377 PVRPVFNGLR 386
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 1 PLREWKNGLR 10
P+R NGLR
Sbjct: 377 PVRPVFNGLR 386
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 PLREW 5
P+R+W
Sbjct: 1774 PIRQW 1778
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 PLREWKNGLR 10
P+R NGLR
Sbjct: 375 PVRPVFNGLR 384
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 PLREW 5
P+R+W
Sbjct: 1774 PIRQW 1778
>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)
Query: 1 PLREWKNG 8
P R +KNG
Sbjct: 262 PARGYKNG 269
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 LREWKN 7
L +WKN
Sbjct: 2543 LSDWKN 2548
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 LREWKN 7
L +WKN
Sbjct: 2543 LSDWKN 2548
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PLREW 5
PLR+W
Sbjct: 778 PLRDW 782
>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)
Query: 2 LREWK 6
+REWK
Sbjct: 351 VREWK 355
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 4 EWKNG 8
EWK G
Sbjct: 41 EWKEG 45
126|SequenceR|635|626|RQPGDPLREW
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 1 RQPGDPLR 8
+QPG P+R
Sbjct: 480 KQPGVPVR 487
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 QPGDPLRE 9
PGDP+ E
Sbjct: 2180 HPGDPVLE 2187
>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)
Query: 1 RQPGDPL 7
R PG PL
Sbjct: 160 RTPGHPL 166
>sp|PHOSP_RABVR|PHOSPHOPROTEIN virus (strain China/MRV) (RABV)
Query: 3 PGDPLREW 10
PG P EW
Sbjct: 179 PGPPALEW 186
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 3 PGDPLREW 10
PG PLRE
Sbjct: 278 PGPPLREL 285
>sp|PHOSP_RABVA|PHOSPHOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 3 PGDPLREW 10
PG P EW
Sbjct: 179 PGPPALEW 186
>sp|PHOSP_RABVC|PHOSPHOPROTEIN virus (strain CVS-11) (RABV)
Query: 3 PGDPLREW 10
PG P EW
Sbjct: 179 PGPPALEW 186
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 2 QPGDPLR 8
QP DPLR
Sbjct: 200 QPIDPLR 206
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 3 PGDPLREW 10
P PL++W
Sbjct: 186 PTSPLQDW 193
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 QPGDPLREW 10
+P +PLRE+
Sbjct: 352 KPPEPLREY 360
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 QPGDPLREW 10
+P +PLRE+
Sbjct: 352 KPPEPLREY 360
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 2 QPGDPLR 8
QP DPLR
Sbjct: 200 QPIDPLR 206
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 1 RQPGDP 6
R PG+P
Sbjct: 573 RDPGEP 578
>sp|UL20_HHV11|PROTEIN UL20|Human herpesvirus 1 (strain 17)
Query: 3 PGDPLR 8
P DPLR
Sbjct: 172 PTDPLR 177
>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo
Query: 2 QPGDPLRE 9
+PGD L+E
Sbjct: 85 EPGDHLKE 92
>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean
Query: 2 QPGDPLRE 9
+PGD L+E
Sbjct: 85 EPGDHLKE 92
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 3 PGDPL 7
PGDP+
Sbjct: 22 PGDPI 26
>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)
Query: 1 RQPGDPLR 8
R PG P R
Sbjct: 144 RAPGGPYR 151
>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New
Query: 1 RQPGDPLR 8
R PG P R
Sbjct: 144 RAPGGPYR 151
>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 RQPGDPLR 8
R PG P R
Sbjct: 144 RAPGGPYR 151
>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)
Query: 1 RQPGDPLR 8
R PG P R
Sbjct: 144 RAPGGPYR 151
>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)
Query: 1 RQPGDPLR 8
R PG P R
Sbjct: 144 RAPGGPYR 151
>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)
Query: 1 RQPGDPLR 8
R PG P R
Sbjct: 144 RAPGGPYR 151
>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South
Query: 1 RQPGDPLR 8
R PG P R
Sbjct: 144 RAPGGPYR 151
>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)
Query: 1 RQPGDPLR 8
R PG P R
Sbjct: 144 RAPGGPYR 151
>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 RQPGDPLR 8
R PG P R
Sbjct: 144 RAPGGPYR 151
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 5 DPLREW 10
DP+R W
Sbjct: 666 DPVRLW 671
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PGDPLREW 10
PG P + W
Sbjct: 218 PGRPEKRW 225
>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)
Query: 1 RQPGDPLR 8
R PG P R
Sbjct: 129 RAPGGPYR 136
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 2 QPGDPLREW 10
QPG + +W
Sbjct: 445 QPGLTIEKW 453
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 3 PGDPLRE 9
PGD L+E
Sbjct: 86 PGDHLKE 92
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 GDPLR 8
GDPLR
Sbjct: 1950 GDPLR 1954
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 6 PLREW 10
PLR+W
Sbjct: 778 PLRDW 782
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 5 DPLREW 10
DP+R W
Sbjct: 666 DPVRLW 671
127|SequenceR|640|631|ICSDFRQPGD
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 ICSDFRQPGD 10
+CSD+RQ D
Sbjct: 1570 LCSDYRQSRD 1579
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 ICSDFRQ 7
+CSD+RQ
Sbjct: 1571 LCSDYRQ 1577
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 ICSDFRQ 7
+CSD+RQ
Sbjct: 1571 LCSDYRQ 1577
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 CSDFRQPG 9
CS+ +QPG
Sbjct: 1153 CSNAKQPG 1160
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 CSDFRQPG 9
CS+ +QPG
Sbjct: 1153 CSNAKQPG 1160
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 SDFRQPGD 10
SDF +P D
Sbjct: 2664 SDFSEPSD 2671
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 3 SDFRQPGD 10
SDF +P D
Sbjct: 2664 SDFSEPSD 2671
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 ICSDFRQ-PG 9
+CS++RQ PG
Sbjct: 1556 LCSEYRQSPG 1565
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 ICSDFRQPGD 10
+C FRQ D
Sbjct: 1287 VCEKFRQKHD 1296
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 ICSDFRQPGD 10
+C FRQ D
Sbjct: 1289 VCEKFRQKHD 1298
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 ICSDFRQ-PG 9
+CS++RQ PG
Sbjct: 1556 LCSEYRQSPG 1565
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 ICSDFRQ-PG 9
+CS++RQ PG
Sbjct: 1556 LCSEYRQSPG 1565
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 1 ICSDFRQPGD 10
+C FRQ D
Sbjct: 1289 VCEKFRQKHD 1298
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 ICSDFRQPGD 10
+C FRQ D
Sbjct: 1289 VCEKFRQKHD 1298
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 ICSDFRQPGD 10
+C FRQ D
Sbjct: 1290 VCEKFRQKHD 1299
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 ICSDFRQ-PG 9
+CS++RQ PG
Sbjct: 1554 LCSEYRQSPG 1563
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 ICSDFRQ-PG 9
+CS++RQ PG
Sbjct: 1556 LCSEYRQSPG 1565
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 ICSDFRQ-PG 9
+CS++RQ PG
Sbjct: 1556 LCSEYRQSPG 1565
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 DFRQPGD 10
DFR P D
Sbjct: 1717 DFRPPHD 1723
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 ICSDFRQPGD 10
+C D QP +
Sbjct: 1367 LCKDCHQPSN 1376
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 5 FRQPGD 10
F QPGD
Sbjct: 300 FHQPGD 305
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ICSDFRQ 7
+C D RQ
Sbjct: 25 LCQDLRQ 31
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ICSDFRQ 7
+C D RQ
Sbjct: 25 LCQDLRQ 31
128|SequenceR|645|636|SGLVIICSDF
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GLVIICS 8
GLVIICS
Sbjct: 22 GLVIICS 28
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GLVIICS 8
GLVIICS
Sbjct: 22 GLVIICS 28
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 LVIICSDF 10
LVIIC+D
Sbjct: 1267 LVIICADL 1274
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 4 VIICSDF 10
V++C+DF
Sbjct: 256 VVVCTDF 262
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 4 VIICSDF 10
V++CSD+
Sbjct: 1569 VVLCSDY 1575
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 4 VIICSDF 10
V++CSD+
Sbjct: 1569 VVLCSDY 1575
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 4 VIICSDF 10
V++CSD+
Sbjct: 1568 VVLCSDY 1574
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 SGLVIICSD 9
S LVIIC +
Sbjct: 1050 SALVIICRN 1058
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 SGLVIICSD 9
S LVIIC +
Sbjct: 1051 SALVIICRN 1059
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 1 SGLVIIC 7
SGLV++C
Sbjct: 273 SGLVMLC 279
>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)
Query: 1 SGLVIIC 7
SGLV++C
Sbjct: 141 SGLVMLC 147
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 SGLVIIC 7
SGLV++C
Sbjct: 273 SGLVMLC 279
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 SGLVIIC 7
SGLV++C
Sbjct: 273 SGLVMLC 279
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 1 SGLVIIC 7
SGLV++C
Sbjct: 273 SGLVMLC 279
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 1 SGLVIIC 7
SGLV++C
Sbjct: 273 SGLVMLC 279
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 SGLVIIC 7
SGLV++C
Sbjct: 273 SGLVMLC 279
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 1 SGLVIIC 7
SGLV++C
Sbjct: 271 SGLVMLC 277
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 SGLVIIC 7
SGLV++C
Sbjct: 273 SGLVMLC 279
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 SGLVIIC 7
SGLV++C
Sbjct: 273 SGLVMLC 279
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GLVIICS 8
GL++ICS
Sbjct: 22 GLLMICS 28
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 LVIICSDF 10
LV++C+D
Sbjct: 525 LVVVCNDL 532
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 3 LVIICSDF 10
LV++C+D
Sbjct: 525 LVVVCNDL 532
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 GLVIICSDF 10
GL+I+ DF
Sbjct: 220 GLLIVTKDF 228
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 GLVIICSDF 10
GL+I+ DF
Sbjct: 220 GLLIVTKDF 228
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 GLVIICSDF 10
GL+I+ DF
Sbjct: 220 GLLIVTKDF 228
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 GLVIICSDF 10
GL+I+ DF
Sbjct: 220 GLLIVTKDF 228
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 GLVIICSDF 10
GL+I+ DF
Sbjct: 220 GLLIVTKDF 228
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 GLVIICSDF 10
GL+I+ DF
Sbjct: 220 GLLIVTKDF 228
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 GLVIICSDF 10
GL+I+ DF
Sbjct: 220 GLLIVTKDF 228
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 GLVIICSDF 10
GL+I+ DF
Sbjct: 220 GLLIVTKDF 228
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 2 GLVIICSDF 10
GL+I+ DF
Sbjct: 221 GLLIVTKDF 229
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 GLVIICSDF 10
GL+I+ DF
Sbjct: 220 GLLIVTKDF 228
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 3 LVIICSDF 10
LV++C+D
Sbjct: 525 LVVVCNDL 532
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 3 LVIICSDF 10
LV++C+D
Sbjct: 525 LVVVCNDL 532
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 LVIICSDF 10
LV++C+D
Sbjct: 525 LVVVCNDL 532
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 3 LVIICSDF 10
LV++C+D
Sbjct: 525 LVVVCNDL 532
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 3 LVIICSDF 10
L +IC+DF
Sbjct: 210 LEMICNDF 217
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 2 GLVIICSDF 10
GLV IC +
Sbjct: 546 GLVFICVKY 554
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 VIICSD 9
VIIC D
Sbjct: 1318 VIICDD 1323
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 GLVIIC 7
GLV++C
Sbjct: 1997 GLVLVC 2002
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 GLVIIC 7
GLV++C
Sbjct: 1997 GLVLVC 2002
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 GLVIIC 7
GLV IC
Sbjct: 543 GLVFIC 548
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 2 GLVIIC 7
GLV IC
Sbjct: 553 GLVFIC 558
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 2 GLVIIC 7
GLV IC
Sbjct: 553 GLVFIC 558
>sp|E1BS_ADE41|E1B protein, small T-antigen|Human adenovirus F serotype 41
Query: 1 SGLVIIC 7
SGL IC
Sbjct: 91 SGLAFIC 97
>sp|E1BS_ADE40|E1B protein, small T-antigen|Human adenovirus F serotype 40
Query: 1 SGLVIIC 7
SGL IC
Sbjct: 91 SGLAFIC 97
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 GLVIIC 7
GL++IC
Sbjct: 769 GLLVIC 774
>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GLVIICSD 9
GLV +C D
Sbjct: 462 GLVALCLD 469
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 VIICSDF 10
+ +C+DF
Sbjct: 1874 IAVCNDF 1880
129|SequenceR|650|641|SLFSPSGLVI
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 FSPSGLVI 10
F PSGLV+
Sbjct: 287 FVPSGLVL 294
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 FSPSGLVI 10
F PSG+V+
Sbjct: 287 FVPSGMVL 294
>sp|PHOSP_VSNJO|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 1 SLFSPSGL 8
SLF P GL
Sbjct: 118 SLFPPVGL 125
>sp|PHOSP_VSNJM|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 1 SLFSPSGL 8
SLF P GL
Sbjct: 118 SLFPPVGL 125
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 1 SLFSPSGLV 9
S SPSG++
Sbjct: 448 SKISPSGII 456
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 SLFSPSGLVI 10
+L SP LV+
Sbjct: 1889 ALLSPGALVV 1898
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 SLFSPSGLVI 10
+L SP LV+
Sbjct: 1883 ALLSPGALVV 1892
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 SLFSPSGLVI 10
+L SP LV+
Sbjct: 1890 ALLSPGALVV 1899
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 2 LFSPSGLVI 10
LFS G+V+
Sbjct: 314 LFSTDGIVL 322
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 LFSPSGLVI 10
LFS G+V+
Sbjct: 314 LFSTDGIVL 322
>sp|PG097_VACCC|PROTEIN OPG097|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LFSPSGLVI 10
LFS G+V+
Sbjct: 315 LFSTDGIVL 323
>sp|PG097_MONPV|PROTEIN OPG097|Monkeypox virus (MPXV)
Query: 2 LFSPSGLVI 10
LFS G+V+
Sbjct: 309 LFSTDGIVL 317
130|SequenceR|655|646|WYRRGSLFSP
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WYRRGS 6
WYR+GS
Sbjct: 669 WYRKGS 674
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WYRRGS 6
WYR+GS
Sbjct: 669 WYRKGS 674
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 RRGSLFSP 10
RRG+L SP
Sbjct: 1152 RRGALLSP 1159
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 RRGSLFSP 10
RRG+L SP
Sbjct: 1152 RRGALLSP 1159
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 RRGSLFSP 10
RRG+L SP
Sbjct: 1152 RRGALLSP 1159
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WYRRGS 6
WY++GS
Sbjct: 669 WYKKGS 674
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WYRRGS 6
WY++GS
Sbjct: 669 WYKKGS 674
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WYRRGS 6
WY++GS
Sbjct: 669 WYKKGS 674
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WYRRGS 6
W+R+GS
Sbjct: 670 WFRKGS 675
>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 WYRRGSLF 8
WY G+L+
Sbjct: 167 WYAEGALY 174
>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 WYRRGSLF 8
WY G+L+
Sbjct: 167 WYAEGALY 174
>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 WYRRGSLF 8
WY G+L+
Sbjct: 167 WYAEGALY 174
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WYRRGS 6
W+R+GS
Sbjct: 670 WFRKGS 675
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WYRRGS 6
W+R+GS
Sbjct: 670 WFRKGS 675
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WYRRGS 6
W+R+GS
Sbjct: 670 WFRKGS 675
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WYRRGS 6
W+R+GS
Sbjct: 670 WFRKGS 675
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 RRGSLFSP 10
RGSL SP
Sbjct: 1148 NRGSLLSP 1155
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 RRGSLFSP 10
+RG+L SP
Sbjct: 1152 KRGALLSP 1159
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 RGSLFSP 10
RGSL SP
Sbjct: 1149 RGSLLSP 1155
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 RGSLFSP 10
RGSL SP
Sbjct: 1149 RGSLLSP 1155
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 RGSLFSP 10
RGSL SP
Sbjct: 1149 RGSLLSP 1155
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 RGSLFSP 10
RGSL SP
Sbjct: 1149 RGSLLSP 1155
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 RGSLFSP 10
RGSL SP
Sbjct: 1149 RGSLLSP 1155
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 RRGSLFSP 10
RGSL SP
Sbjct: 1148 NRGSLLSP 1155
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 RGSLFSP 10
RGSL SP
Sbjct: 1149 RGSLLSP 1155
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 RGSLFSP 10
RGSL SP
Sbjct: 1149 RGSLLSP 1155
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 RRGSLFSP 10
+RG+L SP
Sbjct: 1152 KRGALLSP 1159
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 RGSLFSP 10
RGSL SP
Sbjct: 1149 RGSLLSP 1155
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 RGSLFSP 10
RGSL SP
Sbjct: 1149 RGSLLSP 1155
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 RGSLFSP 10
RGSL SP
Sbjct: 1149 RGSLLSP 1155
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 WYRRGS 6
W+++GS
Sbjct: 391 WFKKGS 396
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WYRRGS 6
W+++GS
Sbjct: 440 WFKKGS 445
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WYRRGS 6
W+++GS
Sbjct: 571 WFKKGS 576
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 1 WYRRGSLF 8
WY + S+F
Sbjct: 87 WYLKTSIF 94
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 WYRRGSL 7
WY+ G+L
Sbjct: 2069 WYKPGTL 2075
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 WYRRGS 6
W+++GS
Sbjct: 671 WFKKGS 676
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 WYRRGS 6
W+++GS
Sbjct: 671 WFKKGS 676
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 3 RRGSLFSP 10
RRG F+P
Sbjct: 138 RRGHAFAP 145
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 3 RRGSLFSP 10
RRG F+P
Sbjct: 138 RRGHAFAP 145
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 1 WYRRGSLF 8
WY + S+F
Sbjct: 87 WYLKTSVF 94
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 YRRGSLFSP 10
+RRG F P
Sbjct: 2276 FRRGPAFPP 2284
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 WYRRGS 6
W+ RGS
Sbjct: 233 WHSRGS 238
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 WYRRGSLF 8
WY RG L
Sbjct: 782 WYVRGKLV 789
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WYRRGS 6
W+++GS
Sbjct: 671 WFKKGS 676
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 WYRRGSLF 8
WY RG L
Sbjct: 782 WYVRGKLV 789
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 WYRRGSL 7
W+++GS+
Sbjct: 689 WFKKGSV 695
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 3 RRGSLFSP 10
RRG F+P
Sbjct: 138 RRGHAFAP 145
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WYRRGS 6
W+++GS
Sbjct: 391 WFKKGS 396
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 WYRRGS 6
W+ RGS
Sbjct: 233 WHSRGS 238
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 WYRRGS 6
W+ RGS
Sbjct: 233 WHSRGS 238
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 4 RGSLFSP 10
RG+L SP
Sbjct: 1149 RGALLSP 1155
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 WYRRGS 6
W+++GS
Sbjct: 671 WFKKGS 676
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WYRRGS 6
W+++GS
Sbjct: 671 WFKKGS 676
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WYRRGS 6
W+++GS
Sbjct: 671 WFKKGS 676
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WYRRGS 6
W+++GS
Sbjct: 671 WFKKGS 676
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WYRRGS 6
W+++GS
Sbjct: 671 WFKKGS 676
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WYRRGS 6
W+++GS
Sbjct: 671 WFKKGS 676
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WYRRGS 6
W+++GS
Sbjct: 671 WFKKGS 676
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 WYRRGS 6
W+++GS
Sbjct: 670 WFKKGS 675
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 WYRRGS 6
W+++GS
Sbjct: 671 WFKKGS 676
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 1 WYRRGS 6
W+++GS
Sbjct: 672 WFQKGS 677
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 WYRRGS 6
W+++GS
Sbjct: 671 WFKKGS 676
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 3 RRGSLFS 9
RRG+L+S
Sbjct: 500 RRGNLYS 506
>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P
Query: 3 RRGSLFS 9
+RG LFS
Sbjct: 411 KRGQLFS 417
131|SequenceR|660|651|GVEVEWYRRG
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GVEVEWYRRG 10
+++ WYR+G
Sbjct: 664 ALKINWYRKG 673
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GVEVEWYRRG 10
+++ WYR+G
Sbjct: 664 ALKINWYRKG 673
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 4 VEWYRR 9
V+WYR+
Sbjct: 673 VKWYRK 678
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 VEWYRR 9
V+WYR+
Sbjct: 673 VKWYRK 678
>sp|BARF1_EBVG|SECRETED protein BARF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 VEVEWYRRG 10
+EV W++ G
Sbjct: 44 IEVSWFKLG 52
>sp|BARF1_EBVB9|SECRETED protein BARF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 VEVEWYRRG 10
+EV W++ G
Sbjct: 44 IEVSWFKLG 52
>sp|BARF1_EBVA8|SECRETED protein BARF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 VEVEWYRRG 10
+EV W++ G
Sbjct: 44 IEVSWFKLG 52
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 6 WYRRG 10
WYR+G
Sbjct: 304 WYRQG 308
>sp|GD_HHV2H|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain HG52)
Query: 4 VEWYRRG 10
+ WYR G
Sbjct: 122 IAWYRMG 128
>sp|GD_HHV23|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain 333)
Query: 4 VEWYRRG 10
+ WYR G
Sbjct: 122 IAWYRMG 128
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GVEVEWYRRG 10
+++ WY++G
Sbjct: 664 ALKINWYKKG 673
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GVEVEWYRRG 10
+++ WY++G
Sbjct: 664 ALKINWYKKG 673
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GVEVEWYRRG 10
+++ WY++G
Sbjct: 664 ALKINWYKKG 673
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 EWYRRG 10
EW+R G
Sbjct: 235 EWFRHG 240
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 GVEVEWYRR 9
GV+ W RR
Sbjct: 490 GVKTVWKRR 498
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 EWYRRG 10
EW+R G
Sbjct: 235 EWFRHG 240
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 GVEVEWYRRG 10
G+EV +R G
Sbjct: 925 GLEVRLFRHG 934
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 GVEVEWYRRG 10
G+EV +R G
Sbjct: 923 GLEVRLFRHG 932
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 4 VEWYRRG 10
+ WY RG
Sbjct: 734 LRWYTRG 740
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 EWYRRG 10
EW+R G
Sbjct: 235 EWFRHG 240
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 EWYRRG 10
EW+R G
Sbjct: 235 EWFRHG 240
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 GVEVEWYRR 9
GV+ W RR
Sbjct: 490 GVKTIWKRR 498
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 VEWYRR 9
V+WY++
Sbjct: 673 VKWYKK 678
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 4 VEWYRR 9
V+WY++
Sbjct: 673 VKWYKK 678
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 GVEVEWYRRG 10
G+E+ +R G
Sbjct: 925 GLEIRLFRHG 934
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 GVEVEWYRRG 10
G+E+ +R G
Sbjct: 925 GLEIRLFRHG 934
>sp|CAPSD_HPBVH|CAPSID protein precursor|Human picobirnavirus (strain
Query: 3 EVEWYRR 9
+V WY R
Sbjct: 46 DVAWYAR 52
>sp|ORF23_TTVV5|PROBABLE protein VP2|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 1 GVEVEWY 7
G+E WY
Sbjct: 12 GIERNWY 18
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 1 GVEVEW 6
GVE +W
Sbjct: 648 GVEYQW 653
>sp|VIF_HV2UC|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 GVEVEWYRRG 10
V + WY+R
Sbjct: 86 AVRLTWYKRS 95
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GVEVEWYRRG 10
+ + W+R+G
Sbjct: 665 ALTLHWFRKG 674
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GVEVEWYRRG 10
+ + W+R+G
Sbjct: 665 ALTLHWFRKG 674
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GVEVEWYRRG 10
+ + W+R+G
Sbjct: 665 ALTLHWFRKG 674
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GVEVEWYRRG 10
+ + W+R+G
Sbjct: 665 ALTLHWFRKG 674
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GVEVEWYRRG 10
+ + W+R+G
Sbjct: 665 ALTLHWFRKG 674
132|SequenceR|665|656|WATKDGVEVE
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 1 WATKDGVEVE 10
WA + G+++E
Sbjct: 948 WAKEKGIQLE 957
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 WATKDGVEV 9
W+ +DGV +
Sbjct: 152 WSARDGVNI 160
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 ATKDGVEVE 10
AT+D V+VE
Sbjct: 515 ATQDDVQVE 523
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 ATKDGVEVE 10
AT+D V+VE
Sbjct: 515 ATQDDVQVE 523
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 WATKDGVEVE 10
WA G+++E
Sbjct: 948 WAKNKGIQLE 957
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 ATKDGVEVE 10
AT+D ++VE
Sbjct: 515 ATQDDIQVE 523
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 WATKDGVEVE 10
W T D E+E
Sbjct: 193 WCTSDTPELE 202
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 WATKDGV 7
WAT DG+
Sbjct: 364 WATGDGL 370
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 WATKDGV 7
WAT DG+
Sbjct: 364 WATGDGL 370
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 1 WATKDGV 7
WAT DG+
Sbjct: 364 WATGDGL 370
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 1 WATKDGV 7
WAT DG+
Sbjct: 364 WATGDGL 370
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 1 WATKDGV 7
WAT DG+
Sbjct: 364 WATGDGL 370
>sp|SPIKE_ADE1P|FIBER protein|Human adenovirus B serotype 11
Query: 1 WATKDGVEVE 10
W T D EV+
Sbjct: 296 WNTGDAPEVQ 305
>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25
Query: 1 WATKDGVE 8
W DG+E
Sbjct: 455 WVAGDGIE 462
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 4 KDGVEVE 10
KDG EVE
Sbjct: 426 KDGDEVE 432
>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19
Query: 1 WATKDGVE 8
W DG+E
Sbjct: 446 WVAGDGIE 453
>sp|VE8E2_HPV39|PROTEIN E8^E2C|Human papillomavirus 39
Query: 1 WATKDG 6
W+T DG
Sbjct: 11 WSTSDG 16
>sp|PHOSP_CHAV|PHOSPHOPROTEIN virus (strain I653514) (CHPV)
Query: 2 ATKDGVE 8
T+DG+E
Sbjct: 158 GTRDGIE 164
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 DGVEVE 10
DGV+VE
Sbjct: 6488 DGVDVE 6493
>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31
Query: 3 TKDGVEV 9
+KDG++V
Sbjct: 57 SKDGIQV 63
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 4 KDGVEVE 10
KDG E+E
Sbjct: 426 KDGDEIE 432
133|SequenceR|670|661|CAGLIWATKD
>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 3 GLIWATKD 10
GLIWA D
Sbjct: 245 GLIWAFTD 252
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 3 GLIWATKD 10
GL+WA D
Sbjct: 1006 GLLWACSD 1013
Query: 4 LIWATK 9
L+WAT+
Sbjct: 1047 LLWATR 1052
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 CAGLIW 6
C G+IW
Sbjct: 103 CNGVIW 108
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 1 CAGLIW 6
C G+IW
Sbjct: 103 CNGVIW 108
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CAGLIW 6
C G+IW
Sbjct: 103 CNGVIW 108
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 1 CAGLIW 6
C G+IW
Sbjct: 103 CNGVIW 108
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 1 CAGLIW 6
C G+IW
Sbjct: 103 CNGVIW 108
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 1 CAGLIW 6
C G+IW
Sbjct: 103 CNGVIW 108
>sp|UL56_HHV11|PROTEIN UL56|Human herpesvirus 1 (strain 17)
Query: 1 CAGLIW 6
C G++W
Sbjct: 208 CCGVVW 213
>sp|NEF_HV1EL|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 GLIWATK 9
GLIW+ K
Sbjct: 100 GLIWSKK 106
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 CAGLIW 6
C+G++W
Sbjct: 3699 CSGVMW 3704
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 CAGLIW 6
C+G++W
Sbjct: 3699 CSGVMW 3704
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 CAGLIWA 7
C GL+W
Sbjct: 763 CQGLLWG 769
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 AGLIWATKD 10
AG++W D
Sbjct: 3754 AGVVWTLND 3762
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 GLIWATKD 10
LIW KD
Sbjct: 2710 ALIWNVKD 2717
Query: 1 CAGLIWATK 9
C +W+TK
Sbjct: 2009 CIRCLWSTK 2017
>sp|NEF_HV1Z6|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 GLIWATK 9
GLIW+ K
Sbjct: 105 GLIWSKK 111
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 GLIWATKD 10
LIW KD
Sbjct: 2710 ALIWNVKD 2717
Query: 1 CAGLIWATK 9
C +W+TK
Sbjct: 2009 CIRCLWSTK 2017
>sp|VP30_EBORR|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 6 WATKD 10
WAT+D
Sbjct: 154 WATRD 158
>sp|VP30_EBORE|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 6 WATKD 10
WAT+D
Sbjct: 154 WATRD 158
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 AGLIWATKD 10
AG++W D
Sbjct: 3754 AGVVWTLND 3762
>sp|NEC2_HHV8P|NUCLEAR egress protein 2|Human herpesvirus 8 type P
Query: 1 CAGLIW 6
C GL+W
Sbjct: 262 CLGLVW 267
>sp|NEF_HV1ND|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 GLIWATK 9
GLIW+ K
Sbjct: 100 GLIWSKK 106
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 LIWATKD 10
LIW KD
Sbjct: 2688 LIWNVKD 2694
Query: 1 CAGLIWATK 9
C +W+TK
Sbjct: 1986 CLRCLWSTK 1994
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 LIWATKD 10
LIW KD
Sbjct: 2688 LIWNVKD 2694
Query: 1 CAGLIWATK 9
C +W+TK
Sbjct: 1986 CLRCLWSTK 1994
>sp|K42_HHV8P|PROTEIN K4.2|Human herpesvirus 8 type P
Query: 1 CAGLIWATK 9
C+G+ W+ K
Sbjct: 60 CSGIAWSIK 68
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 1 CAGLIW 6
CA L W
Sbjct: 271 CAALFW 276
>sp|J1I_HCMVA|UNCHARACTERIZED protein HKRFX|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CAGLIW 6
CAG +W
Sbjct: 164 CAGGVW 169
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 AGLIWATKD 10
AGL+W D
Sbjct: 1965 AGLLWCFFD 1973
>sp|NEF_HV1YF|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 GLIWATK 9
GL+W+ K
Sbjct: 105 GLVWSRK 111
>sp|NEF_HV1YB|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 GLIWATK 9
GL+W+ K
Sbjct: 100 GLVWSRK 106
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 CAGLIWA 7
CA + WA
Sbjct: 1490 CAAINWA 1496
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 CAGLIWA 7
CA + WA
Sbjct: 1490 CAAINWA 1496
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 CAGLIWA 7
CA + WA
Sbjct: 1490 CAAINWA 1496
>sp|NEF_HV1MA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 GLIWATK 9
GL+W+ K
Sbjct: 102 GLVWSPK 108
>sp|NEF_HV1A2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 GLIWATK 9
GLIW+ +
Sbjct: 103 GLIWSQR 109
134|SequenceR|675|666|SISTKCAGLI
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 1 SISTKCAGLI 10
S+S CAGL+
Sbjct: 178 SVSFICAGLV 187
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 KCAGLI 10
KCAGL+
Sbjct: 116 KCAGLL 121
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 1 SISTKC 6
SIST+C
Sbjct: 282 SISTRC 287
>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 1 SISTKC 6
SIST+C
Sbjct: 282 SISTRC 287
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 1 SISTKC 6
SIST+C
Sbjct: 282 SISTRC 287
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 1 SISTKCAGLI 10
++ T C GL+
Sbjct: 434 AVRTNCRGLV 443
>sp|ORF27_HHV8P|PROTEIN ORF27|Human herpesvirus 8 type P
Query: 2 ISTKCAGL 9
++T CAG+
Sbjct: 180 VNTSCAGV 187
>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 1 SISTKC 6
S+ST+C
Sbjct: 282 SVSTRC 287
>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11])
Query: 1 SISTKC 6
S+ST+C
Sbjct: 282 SVSTRC 287
>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 1 SISTKC 6
S+ST+C
Sbjct: 282 SVSTRC 287
>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 1 SISTKC 6
S+ST+C
Sbjct: 282 SVSTRC 287
>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 1 SISTKC 6
S+ST+C
Sbjct: 282 SVSTRC 287
>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 1 SISTKC 6
S+ST+C
Sbjct: 282 SVSTRC 287
>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 1 SISTKC 6
S+ST+C
Sbjct: 282 SVSTRC 287
135|SequenceR|680|671|MNGKRSISTK
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 MNGKRSISTK 10
+NG +++ST+
Sbjct: 497 VNGTKTVSTR 506
>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United
Query: 1 MNGKRSISTK 10
+NG++ +ST+
Sbjct: 140 INGEKKLSTR 149
>sp|NS1_INBGL|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GL/1954)
Query: 2 NGKRSIST 9
NG +S+ST
Sbjct: 198 NGDKSLST 205
136|SequenceR|685|676|EPSLTMNGKR
>sp|PG005_VACCC|PROTEIN OPG005|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 EPSLTMNGKR 10
+PS+++NG R
Sbjct: 18 KPSISINGYR 27
>sp|HEMA_CVHN5|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N5)
Query: 2 PSLTMNGK 9
PSL NGK
Sbjct: 56 PSLCNNGK 63
>sp|HEMA_CVHN2|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N2)
Query: 2 PSLTMNGK 9
PSL NGK
Sbjct: 56 PSLCNNGK 63
>sp|HEMA_CVHN1|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N1)
Query: 2 PSLTMNGK 9
PSL NGK
Sbjct: 56 PSLCNNGK 63
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 2 PSLTMNGKR 10
PS+ +G+R
Sbjct: 231 PSIVFHGRR 239
137|SequenceR|690|681|VWYGNEPSLT
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 VWYGNEPS 8
+WYGN P+
Sbjct: 2216 LWYGNVPA 2223
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 VWYGNEPSLT 10
VW G E S T
Sbjct: 137 VWMGREESYT 146
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 VWYGNEPSLT 10
VW G E S T
Sbjct: 137 VWMGREESYT 146
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VWYGNEP 7
VW G EP
Sbjct: 518 VWRGGEP 524
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VWYGNEP 7
VW G EP
Sbjct: 518 VWRGGEP 524
>sp|VE7_HPV2A|PROTEIN E7|Human papillomavirus type 2a
Query: 3 YGNEPSL 9
+GN PSL
Sbjct: 2 HGNRPSL 8
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 3 YGNEPS 8
YG EPS
Sbjct: 13 YGEEPS 18
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 YGNEPS 8
YG EPS
Sbjct: 13 YGEEPS 18
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VWYGNEPS 8
+++G++PS
Sbjct: 37 IYFGDDPS 44
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 1 VWYGNEPS 8
+++G++PS
Sbjct: 37 IYFGDDPS 44
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 VWYGNEPSL 9
+W+ N+P L
Sbjct: 752 LWFNNQPFL 760
>sp|VP30_EBORR|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 GNEPSLT 10
GN P LT
Sbjct: 137 GNSPKLT 143
>sp|VP30_EBORE|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 GNEPSLT 10
GN P LT
Sbjct: 137 GNSPKLT 143
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 1 VWYGNEPSL 9
+W+ EPS+
Sbjct: 96 LWHHTEPSI 104
>sp|VU55_HHV6U|UNCHARACTERIZED protein U55|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VWYGNEP 7
+W+ EP
Sbjct: 321 LWFAQEP 327
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 1 VWYGNEP 7
+W+ EP
Sbjct: 381 LWFAQEP 387
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 VWYGNEPSLT 10
VW N P +T
Sbjct: 3327 VWVLNNPHMT 3336
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 YGNEPS 8
+GN+PS
Sbjct: 494 FGNDPS 499
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VWYGNEPS 8
+W G EPS
Sbjct: 573 IWPGIEPS 580
>sp|IR05_HCMVA|UNCHARACTERIZED protein IRL5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 WYGNE 6
WYG E
Sbjct: 13 WYGRE 17
>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 YGNEPS 8
+GN+PS
Sbjct: 493 FGNDPS 498
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 2 WYGNE 6
W+GN+
Sbjct: 146 WFGNK 150
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 2 WYGNE 6
W+GN+
Sbjct: 146 WFGNK 150
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 YGNEPS 8
+GN+PS
Sbjct: 490 FGNDPS 495
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 YGNEPS 8
+GN+PS
Sbjct: 493 FGNDPS 498
>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 YGNEPS 8
+GN+PS
Sbjct: 493 FGNDPS 498
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 YGNEPS 8
+GN+PS
Sbjct: 493 FGNDPS 498
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 YGNEPS 8
+GN+PS
Sbjct: 497 FGNDPS 502
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 YGNEPS 8
+GN+PS
Sbjct: 493 FGNDPS 498
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 VWYGNEPS 8
+W+ NE S
Sbjct: 169 IWFNNEWS 176
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 VWYGNEPS 8
+W+ NE S
Sbjct: 169 IWFNNEWS 176
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 VWYGNEPS 8
+W+ NE S
Sbjct: 169 IWFNNEWS 176
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 YGNEPS 8
+GN+PS
Sbjct: 505 FGNDPS 510
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 YGNEPS 8
+GN+PS
Sbjct: 505 FGNDPS 510
>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 YGNEPS 8
+GN+PS
Sbjct: 492 FGNDPS 497
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 YGNEPS 8
+GN+PS
Sbjct: 505 FGNDPS 510
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 YGNEPS 8
+GN+PS
Sbjct: 505 FGNDPS 510
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 YGNEPS 8
+GN+PS
Sbjct: 495 FGNDPS 500
138|SequenceR|695|686|KMMIVVWYGN
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 5 VVWYGN 10
++WYGN
Sbjct: 2215 LLWYGN 2220
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 1 KMMIVVWY 8
K+M+ WY
Sbjct: 224 KLMMTQWY 231
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 3 MIVVWYGN 10
+ ++WYG+
Sbjct: 652 LTLIWYGD 659
>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P
Query: 6 VWYGN 10
VWYG+
Sbjct: 131 VWYGS 135
>sp|CAPSD_HBVG3|CAPSID protein|Hepatitis B virus genotype G
Query: 2 MMIVVWYGN 10
M + W GN
Sbjct: 78 MTLATWVGN 86
>sp|CAPSD_HBVG2|CAPSID protein|Hepatitis B virus genotype G
Query: 2 MMIVVWYGN 10
M + W GN
Sbjct: 78 MTLATWVGN 86
>sp|CAPSD_HBVG1|CAPSID protein|Hepatitis B virus genotype G
Query: 2 MMIVVWYGN 10
M + W GN
Sbjct: 78 MTLATWVGN 86
>sp|CAPSD_HBVA3|CAPSID protein|Hepatitis B virus genotype A2
Query: 2 MMIVVWYGN 10
M + W GN
Sbjct: 66 MTLATWVGN 74
>sp|CAPSD_HBVA6|CAPSID protein|Hepatitis B virus genotype A1
Query: 2 MMIVVWYGN 10
M + W GN
Sbjct: 66 MTLATWVGN 74
>sp|CAPSD_HBVB7|CAPSID protein|Hepatitis B virus genotype B1
Query: 2 MMIVVWYGN 10
M + W GN
Sbjct: 66 MTLATWVGN 74
>sp|CAPSD_HBVA5|CAPSID protein|Hepatitis B virus genotype A1
Query: 2 MMIVVWYGN 10
M + W GN
Sbjct: 66 MTLATWVGN 74
>sp|CAPSD_HBVA2|CAPSID protein|Hepatitis B virus genotype A2
Query: 2 MMIVVWYGN 10
M + W GN
Sbjct: 66 MTLATWVGN 74
>sp|CAPSD_HBVA7|CAPSID protein|Hepatitis B virus genotype A2
Query: 2 MMIVVWYGN 10
M + W GN
Sbjct: 66 MTLATWVGN 74
>sp|CAPSD_HBVC8|CAPSID protein|Hepatitis B virus genotype C
Query: 2 MMIVVWYGN 10
M + W GN
Sbjct: 66 MTLATWVGN 74
>sp|CAPSD_HBVA4|CAPSID protein|Hepatitis B virus genotype A2
Query: 2 MMIVVWYGN 10
M + W GN
Sbjct: 66 MTLATWVGN 74
>sp|HBEAG_HBVA3|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 MMIVVWYGN 10
M + W GN
Sbjct: 95 MTLATWVGN 103
>sp|CAPSD_HBVA9|CAPSID protein|Hepatitis B virus genotype A3
Query: 2 MMIVVWYGN 10
M + W GN
Sbjct: 66 MTLATWVGN 74
>sp|HBEAG_HBVA6|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 2 MMIVVWYGN 10
M + W GN
Sbjct: 95 MTLATWVGN 103
>sp|HBEAG_HBVA5|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 2 MMIVVWYGN 10
M + W GN
Sbjct: 95 MTLATWVGN 103
>sp|HBEAG_HBVA2|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 MMIVVWYGN 10
M + W GN
Sbjct: 95 MTLATWVGN 103
>sp|CAPSD_HBVB1|CAPSID protein|Hepatitis B virus genotype B1
Query: 2 MMIVVWYGN 10
M + W GN
Sbjct: 66 MTLATWVGN 74
>sp|HBEAG_HBVA7|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 MMIVVWYGN 10
M + W GN
Sbjct: 95 MTLATWVGN 103
>sp|HBEAG_HBVA4|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 MMIVVWYGN 10
M + W GN
Sbjct: 95 MTLATWVGN 103
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 6 VWYGN 10
+WY N
Sbjct: 581 IWYSN 585
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 6 VWYGN 10
+WY N
Sbjct: 581 IWYSN 585
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 6 VWYGN 10
+WY N
Sbjct: 581 IWYSN 585
>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)
Query: 6 VWYGN 10
+WY N
Sbjct: 581 IWYSN 585
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 6 VWYGN 10
+WY N
Sbjct: 581 IWYSN 585
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 1 KMMIVVWY 8
K+M+ WY
Sbjct: 223 KLMLNKWY 230
>sp|HBEAG_HBVA9|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 2 MMIVVWYGN 10
M + W GN
Sbjct: 95 MTLATWVGN 103
139|SequenceR|700|691|QYENEKMMIV
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 ENEKMMI 9
EN KMM+
Sbjct: 660 ENSKMML 666
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 ENEKMMI 9
EN KMM+
Sbjct: 660 ENSKMML 666
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 ENEKMMI 9
EN KMM+
Sbjct: 656 ENSKMML 662
>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16
Query: 1 QYENEK 6
QY NEK
Sbjct: 86 QYSNEK 91
140|SequenceR|705|696|PVSSAQYENE
>sp|E3B14_ADE03|EARLY E3B 14.5 kDa protein|Human adenovirus B serotype 3
Query: 1 PVSSAQYENE 10
P++ QYENE
Sbjct: 106 PLALVQYENE 115
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 PVSSAQYENE 10
PVS +++NE
Sbjct: 1516 PVSQREFKNE 1525
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 PVSSAQYENE 10
PVS +++NE
Sbjct: 1507 PVSQREFKNE 1516
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 PVSSAQYENE 10
PVS +++NE
Sbjct: 1508 PVSQREFKNE 1517
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 PVSSAQYEN 9
P SS +Y N
Sbjct: 188 PASSLEYRN 196
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 3 SSAQYENE 10
S A YEN+
Sbjct: 505 SDADYEND 512
141|SequenceR|710|701|LLRTPPVSSA
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 1 LLRTPPVSS 9
L+ TPPVSS
Sbjct: 623 LMTTPPVSS 631
>sp|VIF_HV1MV|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 RTPPVSSA 10
R P VSSA
Sbjct: 47 RNPKVSSA 54
>sp|M1_I68A5|MATRIX protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 4 TPPVSSA 10
TPP SSA
Sbjct: 221 TPPSSSA 227
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 LLRTPPVSS 9
L+ TPPV
Sbjct: 1659 LVETPPVEE 1667
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 LLRTPPVSS 9
L+ TPPV
Sbjct: 1659 LVETPPVDE 1667
142|SequenceR|715|706|PPEKILLRTP
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 3 EKILLRTP 10
EKIL++TP
Sbjct: 1045 EKILIKTP 1052
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 3 EKILLRTP 10
EKIL++TP
Sbjct: 1045 EKILIKTP 1052
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 3 EKILLRTP 10
EKIL++TP
Sbjct: 1045 EKILIKTP 1052
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 1 PPEKILLR 8
P EKIL R
Sbjct: 235 PTEKILFR 242
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 EKILLRTP 10
EKI+ R+P
Sbjct: 282 EKIIFRSP 289
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 3 EKILLRTP 10
EKI+ R+P
Sbjct: 282 EKIIFRSP 289
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 3 EKILLRTP 10
EKI+ R+P
Sbjct: 282 EKIIFRSP 289
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 EKILLRTP 10
EKI+ R+P
Sbjct: 282 EKIIFRSP 289
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 EKILLRTP 10
EKI+ R+P
Sbjct: 282 EKIIFRSP 289
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 PPEKILLRTP 10
PP K+L R P
Sbjct: 686 PPVKLLRRVP 695
>sp|V_PI2H|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (HPIV-2)
Query: 1 PPEKILLRTP 10
PPEK+ + TP
Sbjct: 87 PPEKLPINTP 96
>sp|V_PI2HT|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (strain
Query: 1 PPEKILLRTP 10
PPEK+ + TP
Sbjct: 87 PPEKLPINTP 96
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 1 PPEKILLRTP 10
PP K+L R P
Sbjct: 686 PPVKLLRRVP 695
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 1 PPEKILLRTP 10
PP K+L R P
Sbjct: 686 PPVKLLRRVP 695
>sp|PG040_VACCA|SUPERINFECTION exclusion protein|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PEKILLRTP 10
PEK+ TP
Sbjct: 339 PEKLEFNTP 347
>sp|PHOSP_PI2H|PHOSPHOPROTEIN parainfluenza 2 virus (HPIV-2)
Query: 1 PPEKILLRTP 10
PPEK+ + TP
Sbjct: 87 PPEKLPINTP 96
>sp|PG040_VACCC|SUPERINFECTION exclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PEKILLRTP 10
PEK+ TP
Sbjct: 339 PEKLEFNTP 347
>sp|PHOSP_PI2HT|PHOSPHOPROTEIN parainfluenza 2 virus (strain
Query: 1 PPEKILLRTP 10
PPEK+ + TP
Sbjct: 87 PPEKLPINTP 96
>sp|ICP47_HHV11|ICP47 protein|Human herpesvirus 1 (strain 17)
Query: 2 PEKILLRTP 10
PE+ LLR+P
Sbjct: 47 PERPLLRSP 55
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 PPEKILLRTP 10
PP L RTP
Sbjct: 199 PPLVSLARTP 208
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PPEKILLRTP 10
PP L RTP
Sbjct: 199 PPLVSLARTP 208
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPEKILLRTP 10
PP L RTP
Sbjct: 199 PPLVSLARTP 208
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 PPEKIL 6
PP+K+L
Sbjct: 2028 PPQKVL 2033
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 PPEKIL 6
PP+K+L
Sbjct: 2028 PPQKVL 2033
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 PPEKILL 7
PPE +LL
Sbjct: 147 PPEGVLL 153
143|SequenceR|720|711|IGVRKPPEKI
>sp|UL59_HCMVA|UNCHARACTERIZED protein UL59|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GVRKPPEKI 10
GVR PP+ +
Sbjct: 32 GVRSPPDVV 40
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GVRKPPEK 9
G+R PP K
Sbjct: 202 GIRPPPGK 209
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 GVRKPPEKI 10
G+R PPE +
Sbjct: 142 GLRIPPEGV 150
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 GVRKPPEKI 10
G+R PPE +
Sbjct: 142 GLRIPPEGV 150
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 GVRKPPEKI 10
G+R PPE +
Sbjct: 142 GLRIPPEGV 150
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 GVRKPPEKI 10
G+R PPE +
Sbjct: 142 GLRIPPEGV 150
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 GVRKPPEKI 10
G+R PPE +
Sbjct: 142 GLRIPPEGV 150
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 2 GVRKPPE 8
G+++PPE
Sbjct: 1171 GLKRPPE 1177
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GVRKPPE 8
G+++PPE
Sbjct: 1176 GLKRPPE 1182
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 GVRKPPEKI 10
G+R PPE +
Sbjct: 142 GLRIPPEGV 150
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 GVRKPPEKI 10
G+R PPE +
Sbjct: 142 GLRIPPEGV 150
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 GVRKPPEKI 10
G+R PPE +
Sbjct: 142 GLRIPPEGV 150
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 GVRKPPEKI 10
G+R PPE +
Sbjct: 142 GLRIPPEGV 150
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 2 GVRKPPEKI 10
G+R PPE +
Sbjct: 142 GLRIPPEGV 150
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 GVRKPPEKI 10
G+R PPE +
Sbjct: 143 GLRIPPEGV 151
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 IGVRKPPEKI 10
+GV KPP I
Sbjct: 150 LGVHKPPAAI 159
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 IGVRKPPE 8
+G R+PPE
Sbjct: 485 LGARRPPE 492
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 1 IGVRKPP 7
+GV +PP
Sbjct: 6 LGVMRPP 12
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 335 GMRNVPEK 342
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 319 GMRNVPEK 326
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 335 GMRNVPEK 342
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 319 GMRNVPEK 326
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 335 GMRNVPEK 342
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 319 GMRNVPEK 326
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 319 GMRNVPEK 326
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 335 GMRNVPEK 342
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 335 GMRNVPEK 342
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 335 GMRNVPEK 342
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 335 GMRNVPEK 342
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 335 GMRNVPEK 342
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 335 GMRNVPEK 342
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 336 GMRNVPEK 343
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 319 GMRNVPEK 326
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 335 GMRNVPEK 342
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 335 GMRNVPEK 342
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 335 GMRNVPEK 342
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 335 GMRNVPEK 342
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 335 GMRNVPEK 342
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 335 GMRNVPEK 342
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 335 GMRNVPEK 342
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 335 GMRNVPEK 342
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 335 GMRNVPEK 342
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 335 GMRNVPEK 342
>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 RKPPEKI 10
R PPE++
Sbjct: 92 RSPPEEL 98
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 1 IGVRKPPE 8
+G+RKP +
Sbjct: 144 VGMRKPQQ 151
>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 319 GMRNVPEK 326
>sp|HEMA_I70A0|HEMAGGLUTININ A virus (strain A/Qu/7/1970
Query: 2 GVRKPPEK 9
G+R PEK
Sbjct: 319 GMRNVPEK 326
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 2 GVRKPP 7
G+R+PP
Sbjct: 35 GLRQPP 40
144|SequenceR|725|716|RYDVFIGVRK
>sp|UL33_HHV7J|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 7 (strain JI)
Query: 2 YDVFIGVR 9
YD+FIG++
Sbjct: 203 YDLFIGIK 210
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 YDVFIGVRK 10
YDVF GV++
Sbjct: 1724 YDVFPGVKE 1732
>sp|NSS_SFTSV|NON-STRUCTURAL protein NS-S|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 YDVFIGVRK 10
+D FI VRK
Sbjct: 217 WDFFIPVRK 225
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 3 DVFIGV 8
DVF+GV
Sbjct: 360 DVFVGV 365
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 3 DVFIGV 8
DVF+GV
Sbjct: 360 DVFVGV 365
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 3 DVFIGV 8
DVF+GV
Sbjct: 360 DVFVGV 365
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 YDVFIG 7
YD++IG
Sbjct: 546 YDIYIG 551
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 YDVFIG 7
YD++IG
Sbjct: 546 YDIYIG 551
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 YDVFIG 7
YD++IG
Sbjct: 546 YDIYIG 551
>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)
Query: 1 RYDVFIGV 8
RY++FI V
Sbjct: 236 RYNIFINV 243
>sp|UL141_HCMVM|PROTEIN UL141|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 YDVFIGVRK 10
YD + GV+K
Sbjct: 327 YDSYPGVKK 335
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 2 YDVFIGV 8
+D F+GV
Sbjct: 547 FDFFVGV 553
>sp|VP35_MABVP|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 YDVFIGV 8
+D F+GV
Sbjct: 273 FDAFLGV 279
>sp|VP35_MABVO|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 YDVFIGV 8
+D F+GV
Sbjct: 273 FDAFLGV 279
>sp|VP35_MABVM|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 YDVFIGV 8
+D F+GV
Sbjct: 273 FDAFLGV 279
>sp|VP35_MABVA|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 YDVFIGV 8
+D F+GV
Sbjct: 273 FDAFLGV 279
145|SequenceR|730|721|SISGVRYDVF
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 SISGVRYD 8
+ISGVR+D
Sbjct: 864 TISGVRFD 871
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 1 SISGVRYDVF 10
+I GV YD+F
Sbjct: 200 AIYGVNYDLF 209
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 SGVRYDVF 10
+GV YD+F
Sbjct: 2609 AGVCYDIF 2616
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 SGVRYDVF 10
+GV YD+F
Sbjct: 2609 AGVCYDIF 2616
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 4 GVRYDVF 10
GVR D+F
Sbjct: 1370 GVRLDMF 1376
146|SequenceR|735|726|TVNYFSISGV
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 3 NYFSISGV 10
NY+++SG+
Sbjct: 96 NYYALSGI 103
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 3 NYFSISGV 10
NY+++SG+
Sbjct: 98 NYYALSGI 105
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 VNYFSISGV 10
VNY ++SG+
Sbjct: 192 VNYRNVSGI 200
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 3 NYFSISGV 10
NY+++SG+
Sbjct: 96 NYYALSGI 103
>sp|POXIN_VACCC|POXIN virus (strain Copenhagen) (VACV)
Query: 3 NYFSISGV 10
NY+++SG+
Sbjct: 98 NYYALSGI 105
>sp|POXIN_VACCA|POXIN virus (strain Ankara) (VACV)
Query: 3 NYFSISGV 10
NY+++SG+
Sbjct: 98 NYYALSGI 105
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 TVNYFSISG 9
T N+F I+G
Sbjct: 128 TTNHFEIAG 136
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 TVNYFSISG 9
T N+F I+G
Sbjct: 128 TTNHFEIAG 136
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 TVNYFSISG 9
T N+F I+G
Sbjct: 128 TTNHFEIAG 136
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 TVNYFSISG 9
T++Y +ISG
Sbjct: 471 TISYATISG 479
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 4 YFSISGV 10
YF+ SGV
Sbjct: 784 YFTTSGV 790
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 3 NYFSISG 9
N++SI+G
Sbjct: 225 NFYSITG 231
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 NYFSISGV 10
+YFS+S V
Sbjct: 203 DYFSVSQV 210
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 NYFSISGV 10
+YFS+S V
Sbjct: 218 DYFSVSQV 225
>sp|YVAC_VACCC|UNCHARACTERIZED 14.4 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VNYFSISGV 10
V YFS+ G+
Sbjct: 10 VKYFSMLGI 18
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 TVNYFSISG 9
T++Y ++SG
Sbjct: 471 TISYAAVSG 479
147|SequenceR|740|731|IHSRATVNYF
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 1 IHSRATVNYF 10
IH R + YF
Sbjct: 237 IHCRDLLQYF 246
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 1 IHSRATVNYF 10
IH R + YF
Sbjct: 237 IHCRDLLQYF 246
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 1 IHSRATVNYF 10
IH R + YF
Sbjct: 237 IHCRDLLQYF 246
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 IHSRATVNYF 10
+ RAT N+F
Sbjct: 389 LGKRATANFF 398
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 RATVNYF 10
RAT N+F
Sbjct: 392 RATANFF 398
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 HSRATVNY 9
HSR +N+
Sbjct: 2528 HSRKAINH 2535
148|SequenceR|745|736|SAFTYIHSRA
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 2 AFTYIHSR 9
AF Y+HSR
Sbjct: 574 AFKYLHSR 581
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 3 FTYIHSR 9
F Y+HSR
Sbjct: 534 FPYLHSR 540
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 3 FTYIHSR 9
F Y+HSR
Sbjct: 575 FKYLHSR 581
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 3 FTYIHSR 9
F Y+HSR
Sbjct: 535 FPYLHSR 541
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 AFTYIHS 8
A TYIHS
Sbjct: 978 AVTYIHS 984
>sp|VPR_HV2G1|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 5 YIHSR 9
YIHSR
Sbjct: 50 YIHSR 54
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 4 TYIHS 8
TYIHS
Sbjct: 389 TYIHS 393
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 4 TYIHS 8
TYIHS
Sbjct: 414 TYIHS 418
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 2 AFTYIHS 8
A+T++HS
Sbjct: 242 AYTHVHS 248
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 4 TYIHS 8
TYIHS
Sbjct: 387 TYIHS 391
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 4 TYIHS 8
TYIHS
Sbjct: 390 TYIHS 394
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 4 TYIHSR 9
TY+H R
Sbjct: 1761 TYVHRR 1766
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 4 TYIHSR 9
TY+H R
Sbjct: 1761 TYVHRR 1766
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 SAFTYIH 7
SAF Y H
Sbjct: 359 SAFPYFH 365
149|SequenceR|750|741|GSFSCSAFTY
>sp|PG040_VAR67|SUPERINFECTION exclusion protein|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 SFSCSAFTY 10
S +C+AFTY
Sbjct: 8 SLACTAFTY 16
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 1 GSFSCSAFTY 10
GSF+ + FTY
Sbjct: 52 GSFTAAYFTY 61
>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SFSCSAFTY 10
SF+ S FTY
Sbjct: 53 SFTSSPFTY 61
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 SFSCSAFTY 10
+FS AFTY
Sbjct: 10 AFSSPAFTY 18
>sp|IL1BP_CWPXB|INTERLEUKIN-1-BINDING protein|Cowpox virus (strain Brighton Red)
Query: 2 SFSCSAFT 9
+F+C AFT
Sbjct: 306 TFTCMAFT 313
>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)
Query: 2 SFSCSAFT 9
+F+C AFT
Sbjct: 306 TFTCMAFT 313
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 2 SFSCSAFTY 10
SF+ S FTY
Sbjct: 53 SFAASPFTY 61
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 2 SFSCSAFTY 10
+FS AFTY
Sbjct: 10 AFSQPAFTY 18
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 2 SFSCSAFTY 10
+FS AFTY
Sbjct: 10 AFSQPAFTY 18
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 1 GSFSCSA 7
G+F CSA
Sbjct: 632 GTFKCSA 638
>sp|VP40_MABVR|MATRIX protein VP40|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 SFSCSAFTY 10
+FS + FTY
Sbjct: 154 NFSTNQFTY 162
>sp|VP40_MABVP|MATRIX protein VP40|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 SFSCSAFTY 10
+FS + FTY
Sbjct: 154 NFSTNQFTY 162
>sp|VP40_MABVO|MATRIX protein VP40|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 SFSCSAFTY 10
+FS + FTY
Sbjct: 154 NFSTNQFTY 162
>sp|VP40_MABVM|MATRIX protein VP40|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 SFSCSAFTY 10
+FS + FTY
Sbjct: 154 NFSTNQFTY 162
>sp|VP40_MABVA|MATRIX protein VP40|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 SFSCSAFTY 10
+FS + FTY
Sbjct: 154 NFSTNQFTY 162
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 2 SFSCSAFTY 10
SFS + FT+
Sbjct: 322 SFSFAGFTF 330
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 2 SFSCSAFTY 10
+FS FTY
Sbjct: 498 NFSADPFTY 506
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 FSCSAFTY 10
F C +TY
Sbjct: 211 FMCKGWTY 218
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 FSCSAFTY 10
F C +TY
Sbjct: 211 FMCKGWTY 218
150|SequenceR|755|746|IPQLPGSFSC
>sp|NS1_I96A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 IPQLPGSFS 9
IP +PG F+
Sbjct: 163 IPSVPGHFT 171
>sp|PG166_VACCC|PROTEIN OPG166|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 LPGSFSC 10
LPG+++C
Sbjct: 93 LPGTYTC 99
>sp|PG166_VARV|PROTEIN OPG166|Variola virus
Query: 4 LPGSFSC 10
LPG+++C
Sbjct: 93 LPGTYTC 99
>sp|PG166_VAR67|PROTEIN OPG166|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 LPGSFSC 10
LPG+++C
Sbjct: 93 LPGTYTC 99
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IPQLPGS--FSC 10
+PQLPG FSC
Sbjct: 2000 LPQLPGVPFFSC 2011
>sp|PG166_MONPV|PROTEIN OPG166|Monkeypox virus (MPXV)
Query: 4 LPGSFSC 10
LPG+++C
Sbjct: 93 LPGTYTC 99
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 IPQLPGS--FSC 10
+PQLPG FSC
Sbjct: 2001 LPQLPGVPFFSC 2012
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 2 PQLPGSFSC 10
PQ P F+C
Sbjct: 302 PQAPWVFAC 310
>sp|UL04_HCMVT|EARLY glycoprotein GP48|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 PQLPG 6
PQLPG
Sbjct: 87 PQLPG 91
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 IPQLPG 6
+PQLPG
Sbjct: 2000 VPQLPG 2005
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 4 LPGSFSC 10
LP +FSC
Sbjct: 219 LPPNFSC 225
>sp|NS1_I56A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 1 IPQLPG 6
IP LPG
Sbjct: 163 IPSLPG 168
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 IPQLPG 6
+PQLPG
Sbjct: 2000 MPQLPG 2005
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 QLPGSFSC 10
+LP +F C
Sbjct: 335 ELPDAFKC 342
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 QLPGSFSC 10
+LP +F C
Sbjct: 335 ELPDAFKC 342
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 QLPGSFSC 10
+LP +F C
Sbjct: 335 ELPDAFKC 342
>sp|VE2_HPV53|REGULATORY protein E2|Human papillomavirus type 53
Query: 3 QLPGSFSC 10
LPG SC
Sbjct: 283 HLPGGASC 290
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 IPQLPG 6
+PQLPG
Sbjct: 2001 LPQLPG 2006
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 IPQLPG 6
+PQLPG
Sbjct: 2000 MPQLPG 2005
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 IPQLPG 6
+PQLPG
Sbjct: 2000 MPQLPG 2005
>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)
Query: 3 QLPGSF 8
Q PGSF
Sbjct: 277 QTPGSF 282
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IPQLPGS--FSC 10
+P+LPG FSC
Sbjct: 2000 LPKLPGVPFFSC 2011
>sp|NCAP_RVFVZ|NUCLEOPROTEIN valley fever virus (strain
Query: 2 PQLPGSF 8
P LPG +
Sbjct: 155 PSLPGDY 161
>sp|NCAP_RVFV|NUCLEOPROTEIN valley fever virus (RVFV)
Query: 2 PQLPGSF 8
P LPG +
Sbjct: 155 PSLPGDY 161
>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)
Query: 4 LPGSFSC 10
LP F+C
Sbjct: 514 LPSDFTC 520
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IPQLPGS--FSC 10
+P+LPG FSC
Sbjct: 2000 LPRLPGVPFFSC 2011
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IPQLPGS--FSC 10
+P+LPG FSC
Sbjct: 2000 LPRLPGVPFFSC 2011
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IPQLPGS--FSC 10
+P+LPG FSC
Sbjct: 2000 LPRLPGVPFFSC 2011
>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain
Query: 2 PQLPGSF 8
P LPG F
Sbjct: 329 PSLPGEF 335
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 IPQLPGSF 8
IP+L G F
Sbjct: 307 IPELRGQF 314
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 IPQLPGSF 8
IP+L G F
Sbjct: 307 IPELRGQF 314
>sp|GP_PUUMB|ENVELOPE glycoprotein|Puumala virus (strain Berkel)
Query: 2 PQLPGSF 8
P+L GSF
Sbjct: 80 PELSGSF 86
>sp|TEG7_EBVG|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 IPQLPGSFSC 10
+P+ P +F C
Sbjct: 26 LPEEPETFEC 35
>sp|TEG7_EBVB9|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 IPQLPGSFSC 10
+P+ P +F C
Sbjct: 26 LPEEPETFEC 35
>sp|TEG7_EBVA8|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 IPQLPGSFSC 10
+P+ P +F C
Sbjct: 26 LPEEPETFEC 35
>sp|UL106_HCMVA|UNCHARACTERIZED protein UL106|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 PGSFSC 10
PG FSC
Sbjct: 68 PGFFSC 73
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 PQLPGSF 8
P+L GSF
Sbjct: 895 PELNGSF 901
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 2 PQLPGSF 8
P+L GSF
Sbjct: 895 PELNGSF 901
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 2 PQLPGSF 8
P+L GSF
Sbjct: 895 PELNGSF 901
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 PQLPGSF 8
P+L GSF
Sbjct: 895 PELNGSF 901
>sp|SCAF_HHV8P|CAPSID scaffolding protein|Human herpesvirus 8 type P
Query: 2 PQLPG 6
PQLPG
Sbjct: 330 PQLPG 334
151|SequenceR|760|751|TGPSFIPQLP
>sp|UL04_HCMVT|EARLY glycoprotein GP48|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 SFIPQLP 10
SF PQLP
Sbjct: 84 SFFPQLP 90
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 GPSFIPQLP 10
GP + QLP
Sbjct: 3160 GPQHLEQLP 3168
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 GPSFIPQLP 10
GP + QLP
Sbjct: 3160 GPQHLEQLP 3168
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 GPSFIPQLP 10
GP + QLP
Sbjct: 3160 GPQHLEQLP 3168
>sp|PAX_I02A6|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 3 PSFIPQL 9
P FIP L
Sbjct: 103 PKFIPDL 109
>sp|PAX_I02A5|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 3 PSFIPQL 9
P FIP L
Sbjct: 103 PKFIPDL 109
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 GPSFIPQLP 10
GP + QLP
Sbjct: 3160 GPQHLEQLP 3168
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TGPSFIPQ 8
+GP IPQ
Sbjct: 239 SGPGRIPQ 246
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 PSFIPQL 9
P FIP L
Sbjct: 103 PKFIPDL 109
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 PSFIPQL 9
P FIP L
Sbjct: 103 PKFIPDL 109
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 TGPSFIPQ 8
T P FIP+
Sbjct: 222 TQPYFIPE 229
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 TGPSFIPQ 8
TGP+ +P+
Sbjct: 355 TGPATLPE 362
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 GPSFIPQL 9
GP+ +P+L
Sbjct: 2760 GPTRVPEL 2767
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 GPSFIPQL 9
GP+ +P+L
Sbjct: 2761 GPTRVPEL 2768
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 GPSFIPQL 9
GP+ +P+L
Sbjct: 2761 GPTKVPEL 2768
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 GPSFIPQL 9
GP+ +P+L
Sbjct: 2761 GPTKVPEL 2768
>sp|ICP27_HHV6U|MRNA export factor ICP27 homolog|Human herpesvirus 6A (strain
Query: 4 SFIPQLP 10
+F+P LP
Sbjct: 86 TFLPNLP 92
>sp|VP2_POVKI|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 350)
Query: 4 SFIPQLP 10
S++P+LP
Sbjct: 171 SYLPELP 177
>sp|VP2_POVK6|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 60)
Query: 4 SFIPQLP 10
S++P+LP
Sbjct: 171 SYLPELP 177
>sp|VP2_POVK3|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 380)
Query: 4 SFIPQLP 10
S++P+LP
Sbjct: 171 SYLPELP 177
>sp|ICP27_HHV6Z|MRNA export factor ICP27 homolog|Human herpesvirus 6B (strain Z29)
Query: 4 SFIPQLP 10
+F+P LP
Sbjct: 87 TFLPNLP 93
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 TGPSFIP 7
T PSF P
Sbjct: 1987 TDPSFYP 1993
152|SequenceR|765|756|KGGDRTGPSF
>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain
Query: 1 KGGDRTGPS 9
K GD TGP+
Sbjct: 40 KNGDYTGPT 48
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 1 KGGDRTGPSF 10
+ G RTGP F
Sbjct: 470 QAGLRTGPKF 479
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 GGDRTGP 8
GGDR+ P
Sbjct: 734 GGDRSWP 740
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 GGDRTGP 8
GGDR+ P
Sbjct: 744 GGDRSWP 750
>sp|NP1_HBOC2|NON-STRUCTURAL protein NP-1|Human bocavirus 2 (HBoV2) (Human
Query: 2 GGDRTGP 8
GG+RT P
Sbjct: 80 GGNRTNP 86
>sp|LMP1_EBVC|LATENT membrane protein 1|Epstein-Barr virus (strain Cao) (HHV-4)
Query: 1 KGGDRTGPSF 10
KGGDR PS
Sbjct: 358 KGGDRGPPSM 367
>sp|TAT_HV1BN|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 GGDRTGP 8
GGD TGP
Sbjct: 21 GGDPTGP 27
>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)
Query: 3 GDRTGPSF 10
GD GP F
Sbjct: 450 GDSPGPGF 457
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 GDRTGPS 9
G+R GPS
Sbjct: 35 GNRPGPS 41
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 GDRTGPS 9
G+R GPS
Sbjct: 35 GNRPGPS 41
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 GDRTGPS 9
G+R GPS
Sbjct: 35 GNRPGPS 41
>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)
Query: 3 GDRTGPSF 10
GD GP F
Sbjct: 450 GDSPGPGF 457
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 GDRTGPS 9
G+R GPS
Sbjct: 35 GNRPGPS 41
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 GDRTGPS 9
G+R GPS
Sbjct: 35 GNRPGPS 41
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 GDRTGPS 9
G+R GPS
Sbjct: 35 GNRPGPS 41
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 GGDRTGPS 9
GGD GP+
Sbjct: 553 GGDDPGPT 560
Query: 2 GGDRTGPS 9
G DR PS
Sbjct: 654 GSDRVSPS 661
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 GDRTGPS 9
G+R GPS
Sbjct: 35 GNRPGPS 41
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 GGDRTGPS 9
GGD GP+
Sbjct: 553 GGDDPGPT 560
Query: 2 GGDRTGPS 9
G DR PS
Sbjct: 654 GSDRVSPS 661
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 GDRTGPS 9
G+R GPS
Sbjct: 35 GNRPGPS 41
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 3 GDRTGPS 9
G+R GPS
Sbjct: 35 GNRPGPS 41
>sp|LMP1_EBVG|LATENT membrane protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 KGGDRTGPS 9
KGGDR PS
Sbjct: 320 KGGDRGPPS 328
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 KGGDRTGP 8
K D+TGP
Sbjct: 228 KSTDQTGP 235
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GGDRTGP 8
G DR GP
Sbjct: 483 GDDRQGP 489
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 KGGDRTGP 8
+GG++T P
Sbjct: 1730 QGGEKTSP 1737
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 1 KGGDRTGPSF 10
K GD PSF
Sbjct: 124 KVGDTENPSF 133
>sp|EP84_HCMVA|EARLY phosphoprotein p84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GGDRTGPS 9
GG R GPS
Sbjct: 170 GGTRDGPS 177
>sp|EP84_HCMVM|EARLY phosphoprotein p84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GGDRTGPS 9
GG R GPS
Sbjct: 170 GGTRDGPS 177
>sp|NP1_HBOC4|NON-STRUCTURAL protein NP-1|Human bocavirus 4 (HBoV4) (Human
Query: 2 GGDRTGP 8
GG RT P
Sbjct: 80 GGTRTNP 86
>sp|LMP1_EBVA8|LATENT membrane protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 KGGDRTGPS 9
KGGDR PS
Sbjct: 325 KGGDRGPPS 333
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 1 KGGDRTGPS 9
K G R+ PS
Sbjct: 482 KAGKRSAPS 490
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 1 KGGDRTGPSF 10
K GD PSF
Sbjct: 124 KIGDTENPSF 133
153|SequenceR|770|761|LPATNKGGDR
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 LPATNKGGDR 10
LPA N GD+
Sbjct: 449 LPAANPMGDQ 458
>sp|LMP1_EBVG|LATENT membrane protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 NKGGDR 10
NKGGDR
Sbjct: 319 NKGGDR 324
>sp|LMP1_EBVC|LATENT membrane protein 1|Epstein-Barr virus (strain Cao) (HHV-4)
Query: 3 ATNKGGDR 10
NKGGDR
Sbjct: 355 VANKGGDR 362
>sp|LMP1_EBVA8|LATENT membrane protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 NKGGDR 10
NKGGDR
Sbjct: 324 NKGGDR 329
>sp|GI_VZVO|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LPATNKG 7
LPAT KG
Sbjct: 202 LPATPKG 208
>sp|GI_VZVD|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LPATNKG 7
LPAT KG
Sbjct: 202 LPATPKG 208
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LPATNK 6
LPATN+
Sbjct: 717 LPATNR 722
>sp|VME1_CVHOC|MEMBRANE protein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LPATNKG 7
LP+T KG
Sbjct: 212 LPSTQKG 218
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PATNKGGD 9
PA+ GGD
Sbjct: 574 PASATGGD 581
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PATNKGGD 9
PA+ GGD
Sbjct: 574 PASATGGD 581
>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)
Query: 2 PATNKGG 8
PA KGG
Sbjct: 118 PAVTKGG 124
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PATNKGGD 9
PA+ GGD
Sbjct: 574 PASATGGD 581
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LPATNK 6
+PATNK
Sbjct: 115 MPATNK 120
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LPATNKGGD 9
LP++ KG D
Sbjct: 456 LPSSKKGAD 464
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 4 TNKGG 8
TNKGG
Sbjct: 364 TNKGG 368
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 1 LPATNKGGDR 10
LPA N G R
Sbjct: 284 LPAKNGQGQR 293
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 1 LPATNKGG 8
LPA +GG
Sbjct: 457 LPAVRQGG 464
>sp|NEC2_HHV11|NUCLEAR egress protein 2|Human herpesvirus 1 (strain 17)
Query: 1 LPATNKGGD 9
+P+T +GGD
Sbjct: 27 VPSTLRGGD 35
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 4 TNKGGD 9
TNK GD
Sbjct: 1137 TNKNGD 1142
154|SequenceR|775|766|VPCITLPATN
>sp|GL_HHV1K|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain KOS)
Query: 1 VPCITLPATN 10
VPC+ LP+ +
Sbjct: 42 VPCVPLPSDD 51
>sp|GL_HHV11|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain 17)
Query: 1 VPCITLPATN 10
VPC+ LP+ +
Sbjct: 42 VPCVPLPSDD 51
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 CITLPA 8
C+TLPA
Sbjct: 2174 CLTLPA 2179
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 CITLPATN 10
CITL TN
Sbjct: 125 CITLNCTN 132
>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)
Query: 2 PCITL 6
PCITL
Sbjct: 39 PCITL 43
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 2 PCITL 6
PCITL
Sbjct: 39 PCITL 43
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 2 PCITL 6
PCITL
Sbjct: 39 PCITL 43
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 2 PCITL 6
PCITL
Sbjct: 39 PCITL 43
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 2 PCITL 6
PCITL
Sbjct: 39 PCITL 43
>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)
Query: 2 PCITL 6
PCITL
Sbjct: 39 PCITL 43
>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)
Query: 2 PCITL 6
PCITL
Sbjct: 39 PCITL 43
>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)
Query: 2 PCITL 6
PCITL
Sbjct: 39 PCITL 43
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 2 PCITL 6
PCITL
Sbjct: 39 PCITL 43
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 CITLPA 8
C+TLPA
Sbjct: 2166 CLTLPA 2171
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 CITLPA 8
C+TLPA
Sbjct: 2186 CLTLPA 2191
>sp|PAX_I97A1|PROTEIN PA-X|Influenza A virus (strain A/Hong
Query: 2 PCITLP 7
PC+ LP
Sbjct: 210 PCVGLP 215
>sp|PAX_I97A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 2 PCITLP 7
PC+ LP
Sbjct: 210 PCVGLP 215
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 CITLPA 8
C+TLPA
Sbjct: 2166 CLTLPA 2171
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PCITLPATN 10
PC T+P+ N
Sbjct: 148 PCGTVPSMN 156
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 CITLPA 8
C+TLPA
Sbjct: 2178 CLTLPA 2183
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 CITLPA 8
C+TLPA
Sbjct: 2176 CLTLPA 2181
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 CITLPA 8
C+TLPA
Sbjct: 2177 CLTLPA 2182
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 CITLPA 8
C+TLPA
Sbjct: 2167 CLTLPA 2172
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 CITLPA 8
C+TLPA
Sbjct: 2184 CLTLPA 2189
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 CITLPA 8
C+TLPA
Sbjct: 2176 CLTLPA 2181
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 CITLPA 8
C+TLPA
Sbjct: 2165 CLTLPA 2170
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 CITLPA 8
C+TLPA
Sbjct: 2179 CLTLPA 2184
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 CITLPA 8
C+TLPA
Sbjct: 2167 CLTLPA 2172
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 CITLPA 8
C+TLPA
Sbjct: 2168 CLTLPA 2173
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 CITLPA 8
C+TLPA
Sbjct: 2168 CLTLPA 2173
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 CITLPA 8
C+TLPA
Sbjct: 2168 CLTLPA 2173
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 CITLP 7
CITLP
Sbjct: 6911 CITLP 6915
>sp|UL30_HCMVM|UNCHARACTERIZED protein UL30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PCITLP 7
PC+ LP
Sbjct: 96 PCLVLP 101
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 PCITLPATN 10
P +TLP TN
Sbjct: 158 PPLTLPTTN 166
>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)
Query: 2 PCITLPATN 10
PC+ PAT+
Sbjct: 58 PCLYAPATS 66
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 2 PCITLPATN 10
PC T+PA+
Sbjct: 494 PCGTIPASE 502
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 2 PCITLPATN 10
PC T+PA+
Sbjct: 494 PCGTIPASE 502
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 CITLPATN 10
C+TL TN
Sbjct: 125 CVTLNCTN 132
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PCITLPAT 9
P +TLP T
Sbjct: 909 PVVTLPVT 916
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PCITLPAT 9
P +TLP T
Sbjct: 909 PVVTLPVT 916
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PCITLPAT 9
P +TLP T
Sbjct: 909 PVVTLPVT 916
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 CITLPATN 10
C+TL TN
Sbjct: 125 CVTLNCTN 132
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 CITLPATN 10
C+TL TN
Sbjct: 125 CVTLHCTN 132
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 1 VPCITLPA 8
V C T+PA
Sbjct: 54 VGCTTVPA 61
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 CITLPATN 10
C+TL TN
Sbjct: 125 CVTLNCTN 132
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 PCITLPATN 10
PC LPA N
Sbjct: 2069 PCTPLPAPN 2077
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PCITLPATN 10
PC LPA N
Sbjct: 2069 PCTPLPAPN 2077
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 PCITLPATN 10
PC LPA N
Sbjct: 2069 PCTPLPAPN 2077
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 CITLPATN 10
C+TL TN
Sbjct: 125 CVTLNCTN 132
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 CITLPATN 10
C+TL TN
Sbjct: 125 CVTLNCTN 132
>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27
Query: 1 VPCITLPA 8
V C T+PA
Sbjct: 54 VGCTTVPA 61
>sp|PG077_VAR67|TELOMERE-BINDING protein OPG077|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 VPCITLP 7
V C+T+P
Sbjct: 297 VECLTVP 303
>sp|PG077_VACCT|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Tian Tan)
Query: 1 VPCITLP 7
V C+T+P
Sbjct: 297 VECLTVP 303
>sp|PG077_VACCC|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VPCITLP 7
V C+T+P
Sbjct: 297 VECLTVP 303
>sp|PG077_VACCA|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Ankara) (VACV)
Query: 1 VPCITLP 7
V C+T+P
Sbjct: 297 VECLTVP 303
>sp|PG077_MONPZ|TELOMERE-BINDING protein OPG077|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 1 VPCITLP 7
V C+T+P
Sbjct: 297 VECLTVP 303
>sp|PG077_MONPV|TELOMERE-BINDING protein OPG077|Monkeypox virus (MPXV)
Query: 1 VPCITLP 7
V C+T+P
Sbjct: 297 VECLTVP 303
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 CITLPATN 10
C+TL TN
Sbjct: 122 CVTLNCTN 129
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 PCITLPATN 10
PC T+PA +
Sbjct: 494 PCDTVPAQS 502
>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus
Query: 2 PCITLPATN 10
P + L ATN
Sbjct: 356 PIVVLDATN 364
>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 PCITLPATN 10
P + L ATN
Sbjct: 356 PIVVLDATN 364
>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)
Query: 2 PCITLPATN 10
P + L ATN
Sbjct: 356 PIVVLDATN 364
>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PCITLPATN 10
P + L ATN
Sbjct: 356 PIVVLDATN 364
>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PCITLPATN 10
P + L ATN
Sbjct: 356 PIVVLDATN 364
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 CITLPA 8
C++LPA
Sbjct: 2170 CLSLPA 2175
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VPCITLPAT 9
+ C+T+PA+
Sbjct: 182 LSCLTIPAS 190
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VPCITLPAT 9
+ C+T+PA+
Sbjct: 182 LSCLTIPAS 190
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VPCITLPAT 9
+ C+T+PA+
Sbjct: 182 LSCLTIPAS 190
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VPCITLPAT 9
+ C+T+PA+
Sbjct: 182 LSCLTIPAS 190
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 3 CITLPAT 9
C+T+PA+
Sbjct: 184 CLTIPAS 190
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VPCITLPAT 9
+ C+T+PA+
Sbjct: 182 LSCLTIPAS 190
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CITLPAT 9
C+T+PA+
Sbjct: 184 CLTIPAS 190
155|SequenceR|781|771|DPGQGGVPCIT
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 GQGGVPCI 10
G GG PCI
Sbjct: 3832 GIGGTPCI 3839
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 GQGGVPCI 10
G GG PCI
Sbjct: 3832 GIGGTPCI 3839
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 GQGGVPCI 10
G GG PCI
Sbjct: 3846 GVGGKPCI 3853
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 GQGGVPCI 10
G GG PCI
Sbjct: 3846 GVGGKPCI 3853
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 3 GQGGVPC 9
G+GG PC
Sbjct: 307 GEGGFPC 313
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 3 GQGGVPC 9
G+GG PC
Sbjct: 307 GEGGFPC 313
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 GQGGVPCI 10
G GG PCI
Sbjct: 3823 GIGGKPCI 3830
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 GQGGVPCI 10
G GG PCI
Sbjct: 3823 GIGGKPCI 3830
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 2 PGQGGVP 8
PG GG+P
Sbjct: 579 PGAGGIP 585
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 DPGQGGVPC 9
D GQ VPC
Sbjct: 491 DSGQTDVPC 499
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 DPGQGGVPC 9
D GQ VPC
Sbjct: 491 DSGQTDVPC 499
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DPGQGGVPCIT 11
DP QGG IT
Sbjct: 284 DPSQGGRIKIT 294
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 5 GGVPCI 10
G VPCI
Sbjct: 233 GAVPCI 238
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DPGQGG 6
DP QGG
Sbjct: 284 DPSQGG 289
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DPGQGG 6
DP QGG
Sbjct: 284 DPSQGG 289
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DPGQGG 6
DP QGG
Sbjct: 284 DPSQGG 289
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DPGQGG 6
DP QGG
Sbjct: 284 DPSQGG 289
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DPGQGG 6
DP QGG
Sbjct: 284 DPSQGG 289
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DPGQGG 6
DP QGG
Sbjct: 284 DPSQGG 289
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DPGQGG 6
DP QGG
Sbjct: 284 DPSQGG 289
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DPGQGG 6
DP QGG
Sbjct: 284 DPSQGG 289
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 6 GVPCIT 11
GVPC T
Sbjct: 4267 GVPCCT 4272
>sp|US01_HCMVM|PROTEIN US1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PGQGGVP 8
PG GG P
Sbjct: 54 PGSGGWP 60
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 GQGGVPCI 10
G+ VPCI
Sbjct: 1805 GKPNVPCI 1812
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 GQGGVPCI 10
G+ VPCI
Sbjct: 1804 GKPNVPCI 1811
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 GQGGVPCI 10
G+ VPCI
Sbjct: 1804 GKPNVPCI 1811
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 GQGGVPCI 10
G+ VPCI
Sbjct: 1805 GKPNVPCI 1812
>sp|US01_HCMVA|UNCHARACTERIZED protein HQLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PGQGGVP 8
PG GG P
Sbjct: 54 PGSGGWP 60
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PGQGGVP 8
PG GG P
Sbjct: 294 PGCGGAP 300
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PGQGGVP 8
PG GG P
Sbjct: 294 PGCGGAP 300
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PGQGGVPCIT 11
P QG + C++
Sbjct: 427 PIQGNIMCVS 436
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 PGQGGVPCIT 11
P GVPC T
Sbjct: 816 PNTVGVPCKT 825
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 3 GQGGVP 8
GQ GVP
Sbjct: 1062 GQAGVP 1067
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 GQGGVPCIT 11
G+GG+P T
Sbjct: 2261 GRGGMPSTT 2269
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 3 GQGGVPCIT 11
G+GG+P T
Sbjct: 2234 GRGGMPSTT 2242
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 3 GQGGVPCIT 11
G+GG+P T
Sbjct: 2239 GRGGMPSTT 2247
>sp|BZLF1_EBVG|LYTIC switch protein BZLF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PGQGGVPCI 10
P Q +PC+
Sbjct: 39 PSQAPLPCV 47
>sp|BZLF1_EBVB9|LYTIC switch protein BZLF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PGQGGVPCI 10
P Q +PC+
Sbjct: 39 PSQAPLPCV 47
THE END