LYSC_HUMAN Blast Output
Archaea
1|Sequence|1|10|MKALIVLGLV

>sp|Y1852_ARCFU|UNCHARACTERIZED protein AF_1852|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ALIVLGLV 10
AL+VLG+V
Sbjct: 13 ALVVLGVV 20


>sp|PURE_ARCFU|PHOSPHORIBOSYLAMINOIMIDAZOLE carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MKALIVLG 8
MKA+I++G
Sbjct: 27 MKAVIIMG 34




2|Sequence|6|15|VLGLVLLSVT

***** No hits found ******


3|Sequence|11|20|LLSVTVQGKV

>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LLSVTVQGK 9
LLSVT QG+
Sbjct: 632 LLSVTAQGE 640


>sp|Y1039_PYRHO|UNCHARACTERIZED ABC transporter extracellular-binding protein|Pyrococcus horikoshii

Query: 1 LLSVTVQGKV 10
L SVTV GK+
Sbjct: 140 LDSVTVDGKI 149




4|Sequence|16|25|VQGKVFERCE

>sp|KDXD_HALVD|PROBABLE 2-keto-3-deoxyxylonate dehydratase|Haloferax volcanii (strain ATCC

Query: 2 QGKVFERC 9
Q KV++RC
Sbjct: 180 QAKVYDRC 187


>sp|DNLI1_HALWD|DNA ligase 1|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VQGKVFERCE 10
V+G+VF R E
Sbjct: 49 VRGRVFARWE 58


>sp|YNH2_METBA|UNCHARACTERIZED protein in nifH2 5'region|Methanosarcina barkeri

Query: 1 VQGKVFERC 9
V+G V +RC
Sbjct: 99 VRGAVLDRC 107


>sp|NPD_SULAC|NAD-DEPENDENT protein deacetylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 QGKVFERCE 10
+G+V RCE
Sbjct: 146 KGEVIPRCE 154


>sp|GCH3_AERPE|GTP cyclohydrolase III|Aeropyrum pernix (strain ATCC 700893

Query: 5 VFERCE 10
++ERCE
Sbjct: 118 IYERCE 123


>sp|THIC_METKA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 VQGKVFERC 9
VQG++ +RC
Sbjct: 247 VQGELVDRC 255


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QGKVFERC 9
+ K+FERC
Sbjct: 664 EKKLFERC 671


>sp|ADHS_META3|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GKVFERCE 10
GK+ E CE
Sbjct: 135 GKIAETCE 142


>sp|PURL_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GKVFERCE 10
GK+FE+ E
Sbjct: 314 GKIFEKYE 321




5|Sequence|21|30|FERCELARTL

>sp|APGM_METTP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanothrix thermoacetophila (strain DSM

Query: 3 RCELARTL 10
RC LART+
Sbjct: 41 RCGLARTV 48




6|Sequence|26|35|LARTLKRLGM

>sp|SYR_THEAC|ARGININE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LARTLKRLGM 10
+A TLKR+G+
Sbjct: 230 IASTLKRIGI 239


>sp|TBP_METTP|TATA-BOX-BINDING protein|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LARTLKRLG 9
+ARTLK +G
Sbjct: 79 MARTLKSIG 87


>sp|CARB2_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 1 LARTLKRLG 9
+AR L+RLG
Sbjct: 411 IARKLQRLG 419


>sp|DGGGP_SULAC|DIGERANYLGERANYLGLYCERYL phosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ARTLKRLGM 10
AR+LK+LG+
Sbjct: 120 ARSLKKLGL 128


>sp|DAPA_METKA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 LARTLKRLGM 10
L R LK+LG+
Sbjct: 286 LRRELKKLGL 295


>sp|HIS6_THEGJ|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus gammatolerans

Query: 2 ARTLKRLG 9
ART++RLG
Sbjct: 157 ARTVERLG 164


>sp|G1PDH_HYPBU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Hyperthermus butylicus (strain DSM 5456

Query: 3 RTLKRLGM 10
RT++RLG+
Sbjct: 289 RTIRRLGL 296


>sp|ARGB_METTP|ACETYLGLUTAMATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LARTLKRLG 9
++ T+KRLG
Sbjct: 64 ISETMKRLG 72


>sp|BAX1_ARCFU|ENDONUCLEASE Bax1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RTLKRLGM 10
R++KRLG+
Sbjct: 183 RSIKRLGL 190




7|Sequence|31|40|KRLGMDGYRG

>sp|CBID_METMJ|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanoculleus marisnigri (strain ATCC

Query: 2 RLGMDGYRG 10
RL +DGYRG
Sbjct: 81 RLAVDGYRG 89


>sp|Y866_METJA|UNCHARACTERIZED HIT-like protein MJ0866|Methanocaldococcus jannaschii (strain

Query: 1 KRLGMDGY 8
K+LG DGY
Sbjct: 71 KKLGFDGY 78


>sp|MFNA_METM7|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 1 KRLGMDGYR 9
K LG+DGY+
Sbjct: 287 KLLGIDGYK 295


>sp|RS13_THEPD|SMALL ribosomal subunit protein uS13|Thermofilum pendens (strain DSM

Query: 1 KRLGMDGYR 9
K+LG+D YR
Sbjct: 42 KKLGLDPYR 50


>sp|MFNA_METTP|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothrix thermoacetophila

Query: 3 LGMDGYR 9
LG+DGYR
Sbjct: 283 LGIDGYR 289


>sp|MFNA_THEKO|L-ASPARTATE decarboxylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KRLGMDGYR 9
K LG DGY+
Sbjct: 287 KHLGFDGYK 295


>sp|AMPD_METTH|ANHYDROMEVALONATE phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 4 GMDGYR 9
G+DGYR
Sbjct: 90 GLDGYR 95


>sp|MFNA_METMJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoculleus marisnigri

Query: 3 LGMDGYRG 10
LGMDG R
Sbjct: 280 LGMDGMRA 287


>sp|PDXT_ARCFU|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Archaeoglobus fulgidus (strain

Query: 1 KRLGMDG 7
KRLG+DG
Sbjct: 24 KRLGIDG 30


>sp|GCS2_HALVD|GLUTAMATE--CYSTEINE ligase|Haloferax volcanii (strain ATCC 29605

Query: 2 RLGMDGYR 9
RLG+DG R
Sbjct: 320 RLGVDGLR 327


>sp|MFNA_METMP|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 1 KRLGMDGY 8
K LG+DGY
Sbjct: 287 KLLGIDGY 294


>sp|CBSB_SULAC|CYTOCHROME b558/566 subunit B|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 LGMDGYR 9
LG+DGY+
Sbjct: 272 LGIDGYQ 278


>sp|GCS2_HALLT|GLUTAMATE--CYSTEINE ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 RLGMDGYR 9
RLG+DG R
Sbjct: 320 RLGIDGIR 327


>sp|PHAE_HALMA|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaE|Haloarcula marismortui (strain ATCC 43049

Query: 4 GMDGY 8
GMDGY
Sbjct: 57 GMDGY 61


>sp|PHAE_HALHT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaE|Haloarcula hispanica (strain ATCC 33960

Query: 4 GMDGY 8
GMDGY
Sbjct: 57 GMDGY 61


>sp|SPCS_METKA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanopyrus kandleri (strain AV19 /

Query: 3 LGMDGYR 9
LGM GYR
Sbjct: 314 LGMKGYR 320


>sp|OGG1_SULTO|8-OXOGUANINE DNA glycosylase/AP lyase|Sulfurisphaera tokodaii (strain DSM

Query: 1 KRLGMDGYR 9
KRL + GYR
Sbjct: 72 KRLRLAGYR 80


>sp|Y4098_METAC|UPF0292 protein MA_4098|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KRLGMDG 7
KRLG+DG
Sbjct: 43 KRLGIDG 49


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 4 GMDGY 8
GMDGY
Sbjct: 56 GMDGY 60


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RLGMDGYR 9
++G+DG+R
Sbjct: 603 QIGVDGFR 610


>sp|DTDA_HALSA|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 700922

Query: 1 KRLGMDGYRG 10
+R+G D YR
Sbjct: 27 ERIGPDAYRA 36


>sp|DTDA_HALS3|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 29341

Query: 1 KRLGMDGYRG 10
+R+G D YR
Sbjct: 27 ERIGPDAYRA 36


>sp|FEN_SACS2|FLAP endonuclease 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KRLGMDGY 8
KR+ +DGY
Sbjct: 22 KRVSIDGY 29


>sp|Y768_THEKO|UPF0235 protein TK0768|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 GMDGYRG 10
G+DG+RG
Sbjct: 28 GVDGWRG 34


>sp|SYFA_THEVO|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 4 GMDGYRG 10
G DGY G
Sbjct: 301 GFDGYSG 307




8|Sequence|36|45|DGYRGISLAN

>sp|RNP3_METMA|RIBONUCLEASE P protein component 3|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GYRGISLAN 10
GY GI+LAN
Sbjct: 32 GYSGIALAN 40


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 DGYRGISLAN 10
DGY G LAN
Sbjct: 663 DGYVGSDLAN 672


>sp|NIFD_METBA|NITROGENASE molybdenum-iron protein alpha chain|Methanosarcina barkeri

Query: 1 DGYRGIS 7
+GYRG+S
Sbjct: 183 EGYRGVS 189


>sp|RNP3_METAC|RIBONUCLEASE P protein component 3|Methanosarcina acetivorans (strain ATCC

Query: 2 GYRGISLAN 10
G+ GI+LAN
Sbjct: 32 GFSGIALAN 40


>sp|RNP3_METBF|RIBONUCLEASE P protein component 3|Methanosarcina barkeri (strain Fusaro /

Query: 2 GYRGISLAN 10
GY GI+L N
Sbjct: 32 GYSGIALTN 40


>sp|METK_PYRAE|S-ADENOSYLMETHIONINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GYRGISLAN 10
G RGI LAN
Sbjct: 150 GVRGIPLAN 158


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GYRGIS 7
GYRGIS
Sbjct: 521 GYRGIS 526


>sp|METK_PYRCJ|S-ADENOSYLMETHIONINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GYRGISLAN 10
G RG+ LAN
Sbjct: 150 GVRGVPLAN 158


>sp|NNR_METKA|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanopyrus kandleri (strain

Query: 1 DGYRGISLAN 10
DG RGIS N
Sbjct: 341 DGLRGISGVN 350


>sp|RFCL_NANEQ|REPLICATION factor C large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 DGYRGISLA 9
D Y GI+LA
Sbjct: 337 DAYGGIALA 345


>sp|HTPX_THEKO|PROTEASE HtpX homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DGYRGISLAN 10
+ +RG+S+AN
Sbjct: 255 NPFRGMSIAN 264


>sp|Y421_METJA|UNCHARACTERIZED protein MJ0421|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DGYRGI 6
DGY+GI
Sbjct: 33 DGYQGI 38


>sp|Y006_METJA|UNCHARACTERIZED oxidoreductase MJ0006|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DGYRGISLAN 10
D Y G+ L+N
Sbjct: 198 DSYLGVDLSN 207


>sp|GATD_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanothermobacter thermautotrophicus

Query: 1 DGYRGI 6
+GYRGI
Sbjct: 324 EGYRGI 329


>sp|R15PI_METJA|RIBOSE 1,5-bisphosphate isomerase|Methanocaldococcus jannaschii (strain

Query: 1 DGYRGISLAN 10
D Y+GI + N
Sbjct: 260 DKYKGIKIRN 269


>sp|GATD_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 2 GYRGISL 8
GYRGI L
Sbjct: 340 GYRGIVL 346




9|Sequence|41|50|ISLANWMCLA

>sp|RFCL_PYRAE|REPLICATION factor C large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 SLANWMCL 9
+LA+W+CL
Sbjct: 26 TLASWICL 33




10|Sequence|46|55|WMCLAKWESG

>sp|MOBA_THEGJ|PROBABLE molybdenum cofactor guanylyltransferase|Thermococcus gammatolerans

Query: 3 CLAKWESG 10
C+ +WE+G
Sbjct: 116 CVPRWENG 123


>sp|MOBA_THESM|PROBABLE molybdenum cofactor guanylyltransferase|Thermococcus sibiricus

Query: 2 MCLAKWESG 10
+C+ KW++G
Sbjct: 116 VCVPKWKNG 124


>sp|MTRA_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanocaldococcus jannaschii (strain

Query: 4 LAKWESG 10
LAKW++G
Sbjct: 210 LAKWQAG 216


>sp|Y208_METBF|UPF0285 protein Mbar_A0208|Methanosarcina barkeri (strain Fusaro /

Query: 3 CLAKWESG 10
CL KW +
Sbjct: 293 CLGKWHAA 300


>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 3 CLAKWE 8
C+A WE
Sbjct: 150 CIAAWE 155


>sp|RL2_NANEQ|LARGE ribosomal subunit protein uL2|Nanoarchaeum equitans (strain

Query: 2 MCLAKWESG 10
+ + KWE+G
Sbjct: 56 LMVVKWENG 64




11|Sequence|51|60|KWESGYNTRA

>sp|DAPF_METTP|DIAMINOPIMELATE epimerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 WESGY 6
WESGY
Sbjct: 89 WESGY 93


>sp|DUT_METBU|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanococcoides

Query: 2 WESGYNTRA 10
W++GY+ R+
Sbjct: 117 WDAGYSGRS 125


>sp|END4_THEAC|PROBABLE endonuclease 4|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 WESGYNTR 9
W SGY+ R
Sbjct: 186 WASGYDLR 193


>sp|Y3411_METJA|UPF0304 protein MJECS11|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WESGYNTR 9
WES YN +
Sbjct: 147 WESKYNKK 154


>sp|THII_PYRAE|TRNA sulfurtransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 WESGYNTR 9
W GYN R
Sbjct: 223 WSYGYNAR 230


>sp|MTRA_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanocaldococcus jannaschii (strain

Query: 1 KWESGY 6
KW++GY
Sbjct: 212 KWQAGY 217


>sp|DNLI_ARCFU|DNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KWESGYNTR 9
K+ESGY R
Sbjct: 512 KYESGYALR 520


>sp|COPB_ARCFU|COPPER-EXPORTING P-type ATPase B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WESGYNTRA 10
W +GYN A
Sbjct: 643 WATGYNAFA 651


>sp|MOBA_THEGJ|PROBABLE molybdenum cofactor guanylyltransferase|Thermococcus gammatolerans

Query: 1 KWESGY 6
+WE+GY
Sbjct: 119 RWENGY 124


>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KWESGYNTR 9
++ESGY+ R
Sbjct: 518 EYESGYSLR 526


>sp|DNLI_METTF|DNA ligase|Methanothermobacter thermautotrophicus (Methanobacterium

Query: 1 KWESGYNTR 9
++ESGY+ R
Sbjct: 518 EYESGYSLR 526


>sp|DNLI_METST|DNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KWESGYNTR 9
++ESGY+ R
Sbjct: 519 EYESGYSLR 527


>sp|MOBA_THESM|PROBABLE molybdenum cofactor guanylyltransferase|Thermococcus sibiricus

Query: 1 KWESGY 6
KW++GY
Sbjct: 120 KWKNGY 125


>sp|DUT_HALSA|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Halobacterium

Query: 2 WESGYNTRA 10
W++GY R
Sbjct: 110 WDAGYTGRG 118


>sp|DUT_HALS3|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Halobacterium

Query: 2 WESGYNTRA 10
W++GY R
Sbjct: 110 WDAGYTGRG 118


>sp|THII_DESA1|TRNA sulfurtransferase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 KWESGYNTR 9
+W S YN R
Sbjct: 225 EWLSSYNPR 233


>sp|FLUC2_HALMA|FLUORIDE-SPECIFIC ion channel FluC 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 WESGY 6
WE+GY
Sbjct: 86 WENGY 90


>sp|DUT_ARCFU|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Archaeoglobus

Query: 2 WESGYNTRA 10
W++GY R+
Sbjct: 114 WDAGYEGRS 122




12|Sequence|56|65|YNTRATNYNA

***** No hits found ******


13|Sequence|61|70|TNYNAGDRST

>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 1 TNYNAGDRS 9
T Y GDR+
Sbjct: 280 TRYKTGDRT 288


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 NYNAGDRS 9
NYN DRS
Sbjct: 484 NYNLDDRS 491


>sp|Y2265_METBU|PUTATIVE nickel insertion protein|Methanococcoides burtonii (strain DSM 6242

Query: 1 TNYNAGDRST 10
T Y AGD T
Sbjct: 214 TGYGAGDAET 223


>sp|MDH_HALMA|MALATE dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 3 YNAGDRS 9
Y AGDRS
Sbjct: 131 YEAGDRS 137




14|Sequence|66|75|GDRSTDYGIF

>sp|Y981_METJA|UNCHARACTERIZED protein MJ0981|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DRSTDYGIF 10
DRS YGI+
Sbjct: 130 DRSKTYGIY 138


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 1 GDRSTDYGIF 10
GD TD G+F
Sbjct: 683 GDDETDEGMF 692


>sp|IMDH_PYRAB|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 GDRSTDYGIF 10
DR+ +YG++
Sbjct: 321 ADRAQEYGLY 330


>sp|IMDH_PYRHO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GDRSTDYGIF 10
DR+ +YG++
Sbjct: 321 ADRAQEYGLY 330


>sp|IMDH_PYRFU|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GDRSTDYGIF 10
DR+ +YG++
Sbjct: 321 ADRAQEYGLY 330


>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 STDYGIF 10
STD+GI+
Sbjct: 393 STDFGIY 399


>sp|URED_HALWD|UREASE accessory protein UreD|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GDRSTD 6
GDRSTD
Sbjct: 273 GDRSTD 278


>sp|GPDA_ARCFU|NADP(+)-DEPENDENT glycerol-3-phosphate dehydrogenase|Archaeoglobus fulgidus (strain

Query: 1 GDRSTDYGI 9
GDR T +G+
Sbjct: 237 GDRETAFGL 245


>sp|PYRC_SULAC|DIHYDROOROTASE acidocaldarius (strain ATCC 33909

Query: 5 TDYGIF 10
TDYGI+
Sbjct: 109 TDYGIY 114


>sp|PGP2_SACS2|PHOSPHOGLYCOLATE phosphatase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GDRSTDYGIF 10
GD DY +F
Sbjct: 173 GDSENDYALF 182


>sp|TIAS_METMA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina mazei (strain

Query: 1 GDRSTDYGIF 10
GDR D G++
Sbjct: 391 GDRDLDPGLY 400


>sp|RS6E_HYPBU|SMALL ribosomal subunit protein eS6|Hyperthermus butylicus (strain DSM

Query: 1 GDRSTDYG 8
GD S +YG
Sbjct: 26 GDESIEYG 33


>sp|BIOU_HALMT|(S)-8-AMINO-7-OXONONANOATE synthase BioU|Haloferax mediterranei (strain ATCC 33500

Query: 2 DRSTDYGIF 10
+R+ DYG+F
Sbjct: 336 NRAGDYGVF 344


>sp|GVPM2_HALSA|GAS vesicle protein M2|Halobacterium salinarum (strain ATCC 700922

Query: 5 TDYGIF 10
T+YGIF
Sbjct: 54 TEYGIF 59




15|Sequence|71|80|DYGIFQINSR

>sp|OTC_METMA|ORNITHINE carbamoyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DYGIFQINS 9
D+G FQ+N+
Sbjct: 238 DFGSFQVNT 246


>sp|CBIM1_METPE|PUTATIVE cobalt transport protein CbiM|Methanosphaerula palustris (strain

Query: 2 YGIFQIN 8
YGI+Q+N
Sbjct: 26 YGIYQLN 32


>sp|CBIM1_METBF|PUTATIVE cobalt transport protein CbiM|Methanosarcina barkeri (strain

Query: 2 YGIFQIN 8
YGIF++N
Sbjct: 26 YGIFRLN 32


>sp|RL1_PYRAR|LARGE ribosomal subunit protein uL1|Pyrobaculum arsenaticum (strain DSM

Query: 2 YGIFQINSR 10
+G+F++N++
Sbjct: 68 HGVFEVNAK 76


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 1 DYGIFQINSR 10
DY I ++N R
Sbjct: 289 DYRIIEVNPR 298


>sp|LYSX_SULTO|ALPHA-AMINOADIPATE--LYSW ligase LysX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GIFQINSR 10
GI+++NSR
Sbjct: 193 GIYRVNSR 200




16|Sequence|76|85|QINSRYWCND

>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 5 RYWCND 10
RYWC D
Sbjct: 275 RYWCKD 280


>sp|SYR_SULTO|ARGININE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QINSRYWCND 10
++N+R++ ND
Sbjct: 146 EVNTRFYVND 155


>sp|DTDA_SACS2|D-AMINOACYL-TRNA deacylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 NSRYWCND 10
N YW ND
Sbjct: 125 NETYWTND 132


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 6 YWCND 10
YWC D
Sbjct: 276 YWCGD 280


>sp|CPGS_METKA|CYCLIC 2,3-diphosphoglycerate synthetase|Methanopyrus kandleri (strain

Query: 4 SRYWCND 10
+ YWC D
Sbjct: 113 AEYWCPD 119


>sp|DPOL_ARCFU|DNA polymerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 RYWCND 10
R WC D
Sbjct: 23 RLWCKD 28


>sp|Y534_METJA|UNCHARACTERIZED protein MJ0534|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 RYWCND 10
R WC+D
Sbjct: 236 RMWCSD 241


>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 SRYWCND 10
SRYW N+
Sbjct: 319 SRYWDNE 325




17|Sequence|81|90|YWCNDGKTPG

>sp|MOAC_PYRAE|PROBABLE cyclic pyranopterin monophosphate synthase|Pyrobaculum aerophilum

Query: 2 WCNDGK 7
WC DGK
Sbjct: 55 WCKDGK 60


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 YWCNDGK 7
+WC DG+
Sbjct: 276 FWCGDGE 282


>sp|GLCD3_SACS2|GLUCOSE 1-dehydrogenase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YWCNDG 6
+WC DG
Sbjct: 175 WWCKDG 180


>sp|AMPA_AERPE|PROBABLE cytosol aminopeptidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YWCNDGKTPG 10
YW G PG
Sbjct: 465 YWPEKGMAPG 474


>sp|TOP6A_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 YWCNDGKTPG 10
Y CNDG G
Sbjct: 234 YICNDGDPWG 243


>sp|PTH_METVS|PEPTIDYL-TRNA hydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 1 YWCNDGK 7
YW N+G+
Sbjct: 44 YWMNEGQ 50


>sp|RS17_NANEQ|SMALL ribosomal subunit protein uS17|Nanoarchaeum equitans (strain

Query: 3 CNDGKTP 9
CND K P
Sbjct: 14 CNDKKCP 20


>sp|AOR_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus furiosus (strain ATCC

Query: 2 WCNDGKTP 9
W DGK P
Sbjct: 585 WTEDGKIP 592


>sp|LMRAC_THEKO|LEUCINE/METHIONINE racemase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YWCNDGKTPG 10
Y C GK PG
Sbjct: 173 YRCPFGKEPG 182


>sp|RS17_PICTO|SMALL ribosomal subunit protein uS17|Picrophilus torridus (strain ATCC

Query: 3 CNDGKTP 9
CND K P
Sbjct: 15 CNDPKCP 21


>sp|REG6_PYRHO|HTH-TYPE transcriptional regulator FL11|Pyrococcus horikoshii (strain ATCC

Query: 4 NDGKTP 9
NDGK P
Sbjct: 18 NDGKAP 23


>sp|RS17_THEKO|SMALL ribosomal subunit protein uS17|Thermococcus kodakarensis (strain

Query: 3 CNDGKTP 9
CND K P
Sbjct: 15 CNDPKCP 21


>sp|Y130_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5

Query: 1 YWCNDGK 7
+W +DGK
Sbjct: 9 FWYDDGK 15


>sp|EF2_METRM|ELONGATION factor 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 2 WCNDGK 7
+CN+GK
Sbjct: 229 YCNEGK 234


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YWCNDGKTPG 10
+W +GK G
Sbjct: 302 FWATEGKYKG 311


>sp|Y132_PYRHO|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus horikoshii (strain

Query: 1 YWCNDGKT 8
+W +GKT
Sbjct: 9 FWYQEGKT 16




18|Sequence|86|95|GKTPGAVNAC

>sp|MOAB_METJA|PROBABLE molybdopterin adenylyltransferase|Methanocaldococcus jannaschii

Query: 4 PGAVNAC 10
PG+VNAC
Sbjct: 136 PGSVNAC 142


>sp|IF6_HALS3|TRANSLATION initiation factor 6|Halobacterium salinarum (strain ATCC 29341

Query: 1 GKTPGAVNAC 10
G+ PGAVNA
Sbjct: 89 GELPGAVNAA 98


>sp|Y3856_METAC|UPF0285 protein MA_3856|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GKTPGAVNAC 10
GK GA++AC
Sbjct: 169 GKVIGAIDAC 178


>sp|Y679_METMA|UPF0285 protein MM_0679|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GKTPGAVNAC 10
GK GA++AC
Sbjct: 169 GKVIGAIDAC 178


>sp|URE1_NATPD|UREASE subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GKTPGAVNAC 10
G TP A++ C
Sbjct: 225 GSTPAAIDTC 234


>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii (strain

Query: 1 GKTPGAVN 8
GKTPG ++
Sbjct: 745 GKTPGQIS 752


>sp|THTR_METTH|PUTATIVE thiosulfate sulfurtransferase|Methanothermobacter

Query: 1 GKTPGAVN 8
G PGAVN
Sbjct: 192 GHIPGAVN 199


>sp|Y1677_METJA|UPF0056 membrane protein MJ1677|Methanocaldococcus jannaschii (strain ATCC

Query: 4 PGAVNAC 10
PG++ AC
Sbjct: 125 PGSITAC 131


>sp|Y1441_METTH|UPF0285 protein MTH_1441|Methanothermobacter thermautotrophicus (strain

Query: 1 GKTPGAVNAC 10
G+ GA++AC
Sbjct: 171 GRIVGAMDAC 180


>sp|URE1_HALMA|UREASE subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 1 GKTPGAVNAC 10
G TP +N C
Sbjct: 223 GSTPETINTC 232


>sp|FLAB5_THEKO|FLAGELLIN B5|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GKTPGAVN 8
G TPGA N
Sbjct: 65 GSTPGAHN 72




19|Sequence|91|100|AVNACHLSCS

>sp|RNH2_METST|RIBONUCLEASE HII|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 NACHLSC 9
NAC++ C
Sbjct: 106 NACYIDC 112


>sp|QUEE_METHJ|7-CARBOXY-7-DEAZAGUANINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 ACHLSCS 10
C+LSCS
Sbjct: 60 GCNLSCS 66


>sp|HMD_METM5|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain C5 /

Query: 3 NACHLSCS 10
N C SCS
Sbjct: 344 NKCECSCS 351




20|Sequence|96|105|HLSCSALLQD

>sp|Y1385_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 1 HLSCSALL 8
H+SC ALL
Sbjct: 354 HISCDALL 361


>sp|KDGK_SACS2|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE solfataricus (strain ATCC 35092

Query: 1 HLSCSAL 7
HLSCS +
Sbjct: 47 HLSCSLI 53




21|Sequence|101|110|ALLQDNIADA

>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LLQDNIADA 10
+++DN++DA
Sbjct: 144 IIEDNVSDA 152


>sp|RS8E_METBU|SMALL ribosomal subunit protein eS8|Methanococcoides burtonii (strain

Query: 2 LLQDNIAD 9
LLQ+NIA+
Sbjct: 55 LLQENIAN 62




22|Sequence|106|115|NIADAVACAK

>sp|FAEHP_METAR|BIFUNCTIONAL enzyme Fae/Hps|Methanocella arvoryzae (strain DSM 22066

Query: 1 NIADAVACA 9
N+ADAV C+
Sbjct: 249 NLADAVVCS 257


>sp|GSA2_CENSY|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase 2|Cenarchaeum symbiosum (strain A)

Query: 1 NIADAVAC 8
N ADA AC
Sbjct: 376 NAADAAAC 383


>sp|LIPA_HALLT|LIPOYL synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 NIADAVA 7
N+ADAVA
Sbjct: 91 NVADAVA 97


>sp|Y1944_ARCFU|UNCHARACTERIZED protein AF_1944|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NIADAVACAK 10
NIADA+ A+
Sbjct: 127 NIADALLAAR 136


>sp|Y151_METM5|UPF0210 protein MmarC5_0151|Methanococcus maripaludis (strain C5 /

Query: 4 DAVACAK 10
DA+ CAK
Sbjct: 186 DAIGCAK 192


>sp|Y1246_METM6|UPF0210 protein MmarC6_1246|Methanococcus maripaludis (strain C6 /

Query: 4 DAVACAK 10
DA+ CAK
Sbjct: 186 DAIGCAK 192


>sp|Y672_METM7|UPF0210 protein MmarC7_0672|Methanococcus maripaludis (strain C7 /

Query: 4 DAVACAK 10
DA+ CAK
Sbjct: 186 DAIGCAK 192


>sp|Y1427_METMP|UPF0210 protein MMP1427|Methanococcus maripaludis (strain DSM 14266

Query: 4 DAVACAK 10
DA+ CAK
Sbjct: 186 DAIGCAK 192


>sp|SYR_METB6|ARGININE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 NIADAVACA 9
NIAD+VA A
Sbjct: 406 NIADSVARA 414




23|Sequence|111|120|VACAKRVVRD

>sp|PGK_METLZ|PHOSPHOGLYCERATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 CAKRVVRD 10
CAK VRD
Sbjct: 96 CAKHAVRD 103


>sp|REP75_PYRAB|REPLICATION initiator protein|Pyrococcus abyssi (strain GE5 /

Query: 4 AKRVVRD 10
AKRV+RD
Sbjct: 255 AKRVLRD 261


>sp|TRM1_METBU|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcoides burtonii

Query: 2 ACAKRVV 8
ACAKR++
Sbjct: 50 ACAKRIL 56


>sp|SURE_METB6|5'-NUCLEOTIDASE SurE|Methanoregula boonei (strain DSM 21154

Query: 4 AKRVVRD 10
AK+VVRD
Sbjct: 151 AKKVVRD 157


>sp|TRM56_HALWD|TRNA (cytidine(56)-2'-O)-methyltransferase|Haloquadratum walsbyi (strain

Query: 2 ACAKRVV 8
AC KRVV
Sbjct: 172 ACGKRVV 178


>sp|QUEC_METHJ|7-CYANO-7-DEAZAGUANINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 CAKRVVR 9
CAKR+ R
Sbjct: 45 CAKRIAR 51




24|Sequence|116|125|RVVRDPQGIR

>sp|GLYA_SULTO|SERINE hydroxymethyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 VRDPQGIR 10
V+DP GIR
Sbjct: 355 VKDPSGIR 362


>sp|GLYA_AERPE|SERINE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 VRDPQGIR 10
V+DP GIR
Sbjct: 360 VKDPSGIR 367


>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 2 VVRDPQGIR 10
VVRDP GI+
Sbjct: 184 VVRDPVGIK 192


>sp|GLYA_SULAC|SERINE hydroxymethyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 3 VRDPQGIR 10
V+DP G+R
Sbjct: 355 VKDPSGVR 362


>sp|PURA_METMA|ADENYLOSUCCINATE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RVVRDPQGIR 10
R+VRDP+ I+
Sbjct: 178 RIVRDPELIK 187


>sp|DNAG_THEVO|DNA primase DnaG|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RVVRDPQG 8
R+++DPQG
Sbjct: 388 RIIQDPQG 395


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VVRDPQGIR 10
VVRDP +R
Sbjct: 134 VVRDPLAVR 142


>sp|GLYA_METS5|SERINE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 3 VRDPQGIR 10
V DP GIR
Sbjct: 354 VNDPSGIR 361


>sp|GLNA_SULAC|GLUTAMINE synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RVVRDPQGI 9
R RDP+GI
Sbjct: 105 RFERDPRGI 113


>sp|TRPB1_AERPE|TRYPTOPHAN synthase beta chain 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 VRDPQGIR 10
+RDP+G+R
Sbjct: 22 LRDPEGLR 29


>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 3 VRDPQG 8
V+DPQG
Sbjct: 242 VKDPQG 247


>sp|IF2P_METTH|PROBABLE translation initiation factor IF-2|Methanothermobacter

Query: 1 RVVRDPQGIR 10
RVV DP+ +R
Sbjct: 325 RVVTDPEKVR 334


>sp|GUAAA_SULAC|GMP synthase [glutamine-hydrolyzing] subunit A|Sulfolobus

Query: 2 VVRDPQGIR 10
VVR P G R
Sbjct: 132 VVRPPSGFR 140


>sp|NCPP_METKA|PROBABLE inosine/xanthosine triphosphatase|Methanopyrus kandleri (strain

Query: 2 VVRDPQG 8
VVRDP+G
Sbjct: 89 VVRDPKG 95


>sp|ECFA1_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 5 DPQGIR 10
DPQG+R
Sbjct: 169 DPQGVR 174


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 2 VVRDPQGI 9
VRDP GI
Sbjct: 859 TVRDPTGI 866


>sp|PUR1_PYRHO|AMIDOPHOSPHORIBOSYLTRANSFERASE horikoshii (strain ATCC 700860

Query: 3 VRDPQGIR 10
VRDP G R
Sbjct: 177 VRDPVGFR 184


>sp|OTC_METKA|ORNITHINE carbamoyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 RVVRDPQ 7
RVVRDP+
Sbjct: 213 RVVRDPK 219


>sp|GLYA_HYPBU|SERINE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 3 VRDPQGIR 10
++DP G+R
Sbjct: 363 IKDPSGLR 370


>sp|Y273_HALLT|PUTATIVE HTH-type transcriptional regulatory protein|Halorubrum

Query: 3 VRDPQGIR 10
+ DP+GIR
Sbjct: 303 ISDPEGIR 310


>sp|AGLI_HALVD|GLYCOSYLTRANSFERASE AglI|Haloferax volcanii (strain ATCC 29605

Query: 2 VVRDPQGIR 10
V DP GIR
Sbjct: 15 VYNDPTGIR 23


>sp|NSUN6_PYRHO|TRNA (cytosine(72)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 3 VRDPQGI 9
+RDP+G+
Sbjct: 131 IRDPKGL 137




25|Sequence|121|130|PQGIRAWVAW

>sp|FLPA_ARCFU|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Archaeoglobus fulgidus (strain

Query: 3 GIRAWVAW 10
G R WV W
Sbjct: 32 GYREWVPW 39


>sp|DHYS2_ARCFU|PROBABLE deoxyhypusine synthase 2|Archaeoglobus fulgidus (strain ATCC

Query: 1 PQGIRAWVAW 10
P G+R +AW
Sbjct: 39 PAGMRKIIAW 48


>sp|CYSO_AERPE|PROTEIN CysO|Aeropyrum pernix (strain ATCC 700893

Query: 1 PQGIRAWV 8
P G+R W+
Sbjct: 107 PNGVRVWL 114


>sp|Y1507_METJA|UNCHARACTERIZED ABC transporter permease MJ1507|Methanocaldococcus jannaschii

Query: 4 IRAWVAW 10
+ AW++W
Sbjct: 356 VNAWISW 362


>sp|SYH_PYRNV|HISTIDINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PQGIRAWV 8
P+G+R W+
Sbjct: 12 PRGMRDWL 19


>sp|SYH_PYRIL|HISTIDINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PQGIRAWV 8
P+G+R W+
Sbjct: 12 PRGMRDWL 19


>sp|RRP42_SULTO|EXOSOME complex component Rrp42|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GIRAWVAW 10
G + W AW
Sbjct: 134 GKKVWTAW 141


>sp|PCNA2_AERPE|DNA polymerase sliding clamp 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 GIRAWV 8
G+RAW+
Sbjct: 34 GLRAWI 39


>sp|PCKG_SULAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 RAWVAW 10
R WV W
Sbjct: 495 RVWVKW 500


>sp|Y400_METMA|UPF0228 protein MM_0400|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PQGIRAWV 8
P G R W+
Sbjct: 97 PDGFRYWI 104


>sp|FOR_THELN|TUNGSTEN-CONTAINING formaldehyde ferredoxin oxidoreductase|Thermococcus litoralis

Query: 2 QGIRAWVAW 10
+G+ AW+ W
Sbjct: 35 RGLAAWILW 43


>sp|IF2A_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 3 GIRAWVAW 10
G+RA++ W
Sbjct: 46 GVRAFLPW 53


>sp|MAAL_HALMA|METHYLASPARTATE ammonia-lyase|Haloarcula marismortui (strain ATCC 43049

Query: 2 QGIRAWVAW 10
+G+R ++AW
Sbjct: 211 EGLRDYLAW 219


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 5 RAWVAW 10
R WV W
Sbjct: 337 RGWVVW 342


>sp|RNP3_HALLT|RIBONUCLEASE P protein component 3|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 QGIRAW 7
+G+RAW
Sbjct: 206 EGLRAW 211


>sp|PRIS_AERPE|DNA primase small subunit PriS|Aeropyrum pernix (strain ATCC 700893

Query: 3 GIRAWVA 9
G+R W+A
Sbjct: 201 GLRGWIA 207


>sp|RL30_IGNH4|LARGE ribosomal subunit protein uL30|Ignicoccus hospitalis (strain

Query: 5 RAWVAW 10
+AW+ W
Sbjct: 54 QAWITW 59




26|Sequence|126|135|AWVAWRNRCQ

>sp|FLPA_ARCFU|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Archaeoglobus fulgidus (strain

Query: 2 WVAWRNR 8
WV WR++
Sbjct: 36 WVPWRSK 42


>sp|GATD_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Archaeoglobus fulgidus (strain ATCC

Query: 2 WVAWRNR 8
W++WR R
Sbjct: 272 WLSWRYR 278


>sp|Y1513_METJA|UNCHARACTERIZED protein MJ1513|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VAWRNRCQ 10
+ WR +C+
Sbjct: 274 ITWRKKCR 281


>sp|METX_METTH|PROBABLE acyltransferase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 VAWRNR 8
V WRNR
Sbjct: 238 VIWRNR 243


>sp|Y1507_METJA|UNCHARACTERIZED ABC transporter permease MJ1507|Methanocaldococcus jannaschii

Query: 1 AWVAW 5
AW++W
Sbjct: 358 AWISW 362


>sp|DHE3_AERPE|GLUTAMATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 2 WVAWRN 7
W+ W+N
Sbjct: 89 WMTWKN 94


>sp|Y510_ARCFU|UNCHARACTERIZED transporter AF_0510|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AWVAWR 6
AWV W+
Sbjct: 49 AWVFWK 54


>sp|SYY_SACS2|TYROSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 AWVAWRN 7
AW AW N
Sbjct: 77 AWHAWIN 83


>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 WVAWR 6
WV WR
Sbjct: 333 WVMWR 337




27|Sequence|131|140|RNRCQNRDVR

>sp|PYRC_METTH|DIHYDROOROTASE thermautotrophicus (strain ATCC 29096

Query: 4 CQNRDV 9
C+NRDV
Sbjct: 170 CENRDV 175


>sp|SECF_METJA|PROTEIN-EXPORT membrane protein SecF|Methanocaldococcus jannaschii (strain ATCC

Query: 3 RCQNRDV 9
RC+N DV
Sbjct: 77 RCKNEDV 83


>sp|Y688_PYRIL|UPF0179 protein Pisl_0688|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RNRCQNRD 8
R RC++RD
Sbjct: 123 RTRCKDRD 130


>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 1 RNRCQNRDVR 10
RNRC++ R
Sbjct: 394 RNRCKSEPFR 403




28|Sequence|136|148|NRDVRQYVQGCGV

>sp|SYP_METJA|PROLINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DVRQYVQGCGV 13
DVR ++GCGV
Sbjct: 18 DVRYPIKGCGV 28


>sp|HIS6_METB6|IMIDAZOLE glycerol phosphate synthase subunit|Methanoregula boonei (strain

Query: 2 RDVRQYVQGCGV 13
RDV++Y++G G+
Sbjct: 253 RDVKEYLKGKGI 264


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DVRQYVQGCG 12
D+R Y+QG G
Sbjct: 425 DLRTYIQGSG 434


>sp|SYP_METVS|PROLINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 DVRQYVQGCGV 13
D+R ++GCGV
Sbjct: 18 DLRYPIKGCGV 28


>sp|SYP_METMP|PROLINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 DVRQYVQGCGV 13
D+R ++GCGV
Sbjct: 18 DLRYPIKGCGV 28


>sp|SYP_METM7|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 DVRQYVQGCGV 13
D+R ++GCGV
Sbjct: 18 DLRYPIKGCGV 28


>sp|SYP_METM6|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 DVRQYVQGCGV 13
D+R ++GCGV
Sbjct: 18 DLRYPIKGCGV 28


>sp|SYP_METM5|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 DVRQYVQGCGV 13
D+R ++GCGV
Sbjct: 18 DLRYPIKGCGV 28


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 DVRQYVQGCG 12
DVR Y+Q G
Sbjct: 552 DVRTYIQATG 561


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DVRQYVQGCG 12
DVR Y+Q G
Sbjct: 550 DVRTYIQASG 559


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DVRQYVQGCG 12
DVR Y+Q G
Sbjct: 549 DVRTYIQASG 558


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 3 DVRQYVQGCG 12
DVR Y+Q G
Sbjct: 549 DVRTYIQASG 558


>sp|SYP_META3|PROLINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 DVRQYVQGCGV 13
D+R ++GCGV
Sbjct: 19 DLRYPLKGCGV 29


>sp|Y384_ARCFU|UPF0252 protein AF_0384|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VRQYVQGCGV 13
+RQY +G G+
Sbjct: 227 IRQYFKGTGI 236


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 DVRQYVQGCG 12
DV Y+QG G
Sbjct: 543 DVTTYIQGSG 552


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 4 VRQYVQGC 11
VR YV GC
Sbjct: 370 VRNYVGGC 377


>sp|DHE_HALSI|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (Halobacterium halobium)

Query: 1 NRDVRQYVQG 10
NRD+RQ + G
Sbjct: 367 NRDLRQRLTG 376


>sp|DHE_HALSA|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (strain ATCC 700922

Query: 1 NRDVRQYVQG 10
NRD+RQ + G
Sbjct: 367 NRDLRQRLTG 376


>sp|PURP_METS3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanobrevibacter smithii (strain ATCC

Query: 1 NRDVRQYVQGC 11
N + +YV GC
Sbjct: 197 NAHIEEYVSGC 207


>sp|TRPC_SULTO|INDOLE-3-GLYCEROL phosphate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NRDVRQYVQ 9
NRD+ +YV+
Sbjct: 61 NRDLEEYVK 69


>sp|F16PA_METHJ|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 VRQYVQGCG 12
+R+Y++ CG
Sbjct: 15 LRKYLESCG 23


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DVRQYVQGCG 12
DV+ Y+Q G
Sbjct: 464 DVKTYIQASG 473


>sp|RGYRB_NANEQ|REVERSE gyrse subunit B|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 DVRQYVQGCG 12
DV+ Y+Q G
Sbjct: 521 DVKTYIQASG 530


>sp|PRIS_SACI7|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 RDVRQYVQGCGV 13
+++ +YV G GV
Sbjct: 197 KEIAEYVMGVGV 208


>sp|PRIS_SACI2|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 RDVRQYVQGCGV 13
+++ +YV G GV
Sbjct: 197 KEIAEYVMGVGV 208


>sp|PRIS_SACI1|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 RDVRQYVQGCGV 13
+++ +YV G GV
Sbjct: 197 KEIAEYVMGVGV 208


>sp|PRIS_SACI4|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.14.25

Query: 2 RDVRQYVQGCGV 13
+++ +YV G GV
Sbjct: 197 KEIAEYVMGVGV 208


>sp|PRIS_SACI3|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 RDVRQYVQGCGV 13
+++ +YV G GV
Sbjct: 197 KEIAEYVMGVGV 208


>sp|PRIS_SACI6|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.16.4

Query: 2 RDVRQYVQGCGV 13
+++ +YV G GV
Sbjct: 197 KEIAEYVMGVGV 208


>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 DVRQYVQGC 11
D R+YV+ C
Sbjct: 159 DGRKYVESC 167


>sp|PRIS_HALMA|DNA primase small subunit PriS|Haloarcula marismortui (strain ATCC

Query: 2 RDVRQYVQGCGV 13
R+V YV+G G+
Sbjct: 169 REVVDYVRGIGL 180


>sp|PRIS_SACS2|DNA primase small subunit PriS|Saccharolobus solfataricus (strain ATCC

Query: 2 RDVRQYVQGCGV 13
+++ +YV G GV
Sbjct: 197 KEIAEYVMGIGV 208


>sp|AMTAB_METJA|PROBABLE threonylcarbamoyladenosine tRNA

Query: 3 DVRQYVQGCG 12
D+R YV+G G
Sbjct: 11 DMRVYVEGYG 20


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 3 DVRQYVQGCG 12
D+R Y+Q G
Sbjct: 667 DLRTYIQASG 676


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DVRQYVQGCG 12
D+ Y+QG G
Sbjct: 490 DIITYIQGSG 499


>sp|SPEE2_HYPBU|POLYAMINE aminopropyltransferase 2|Hyperthermus butylicus (strain DSM 5456

Query: 3 DVRQYVQGC 11
D R+YV+ C
Sbjct: 143 DGRRYVENC 151


>sp|ILVC_ARCFU|KETOL-ACID reductoisomerase (NAD(P)(+))|Archaeoglobus fulgidus (strain ATCC

Query: 5 RQYVQGCGV 13
R YV+G GV
Sbjct: 140 RMYVEGKGV 148


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 4 VRQYVQGCGV 13
+ V+GCGV
Sbjct: 505 IEDIVRGCGV 514


>sp|TRUD_PYRAE|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum aerophilum (strain ATCC

Query: 1 NRDVRQYVQGCG 12
NR + Y +G G
Sbjct: 303 NRQIAYYAEGLG 314


>sp|ILVC_METAR|KETOL-ACID reductoisomerase (NADP(+))|Methanocella arvoryzae (strain DSM 22066

Query: 5 RQYVQGCGV 13
R Y QG GV
Sbjct: 139 RMYQQGAGV 147


>sp|SYR_PYRAR|ARGININE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 NR-DVRQYVQGCGV 13
NR +V YV CGV
Sbjct: 149 NRVEVHFYVDDCGV 162


>sp|RL18E_PYRAE|LARGE ribosomal subunit protein eL18|Pyrobaculum aerophilum (strain ATCC

Query: 4 VRQYVQGCGV 13
VR+Y +G GV
Sbjct: 109 VRKYPRGSGV 118






THE END