IL31R_HUMAN Blast OutputR
Viruses
1|SequenceR|10|1|LMWLAWTWMM

>sp|NS1A_TASV1|NON-STRUCTURAL polyprotein 1A|Turkey astrovirus 1 (TAstV-1)

Query: 2 MWLAWTWMM 10
+++AW WM+
Sbjct: 402 LFVAWVWMV 410


>sp|L_EBLV1|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 1 (strain

Query: 2 MWLAWTW 8
M+LAW+W
Sbjct: 2047 MYLAWSW 2053


>sp|RDRP_SSDRV|RNA replication protein|Sclerotinia sclerotiorum

Query: 3 WLAWTWMM 10
+L WTW M
Sbjct: 990 YLNWTWRM 997


>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P

Query: 2 MWLAWTWMM 10
+W+ WT+ M
Sbjct: 8 LWILWTFTM 16


>sp|POL2_BRAV|RNA2 polyprotein|Blackcurrant reversion association virus (BRAV)

Query: 2 MWLAWTWMM 10
+WLA WM+
Sbjct: 160 LWLAPAWMV 168


>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 2 MWLAWTW 8
+WLAW W
Sbjct: 1974 IWLAWHW 1980


>sp|NS1AB_TASV1|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 1 (TAstV-1)

Query: 2 MWLAWTWMM 10
+++AW WM+
Sbjct: 402 LFVAWVWMV 410


>sp|RDRP_CGMVS|REPLICASE large subunit|Cucumber green mottle mosaic virus

Query: 4 LAWTWMM 10
LAW W M
Sbjct: 1448 LAWMWSM 1454


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 AWTWM 9
AWTW+
Sbjct: 1218 AWTWL 1222


>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 AWTWM 9
AWTW+
Sbjct: 1219 AWTWL 1223


>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 AWTWM 9
AWTW+
Sbjct: 1218 AWTWL 1222


>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 AWTWM 9
AWTW+
Sbjct: 1218 AWTWL 1222


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 AWTWM 9
AWTW+
Sbjct: 1218 AWTWL 1222


>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 AWTWM 9
AWTW+
Sbjct: 1219 AWTWL 1223


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 5 AWTWMM 10
AW WM+
Sbjct: 6389 AWRWML 6394


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 5 AWTWMM 10
AW WM+
Sbjct: 6364 AWRWML 6369


>sp|RDRP_SJNNV|RNA-DIRECTED RNA polymerase|Striped jack nervous necrosis virus

Query: 5 AWTWM 9
AWTW+
Sbjct: 677 AWTWI 681


>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 WLAWTW 8
WL WT+
Sbjct: 193 WLIWTY 198


>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 WLAWTW 8
WL WT+
Sbjct: 193 WLIWTY 198


>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3 WLAWTW 8
WL WT+
Sbjct: 193 WLIWTY 198


>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)

Query: 2 MWLAW 6
MWLAW
Sbjct: 378 MWLAW 382


>sp|POLG_PEMVC|GENOME polyprotein|Pepper mottle virus (isolate California)

Query: 3 WLAWTW 8
WL +TW
Sbjct: 1826 WLLYTW 1831


>sp|YL590_MIMIV|UNCHARACTERIZED protein L590|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 AWTW 8
AWTW
Sbjct: 107 AWTW 110


>sp|IE61_CHV9D|E3 ubiquitin-protein ligase IE61|Cercopithecine herpesvirus 9 (strain

Query: 5 AWTW 8
AWTW
Sbjct: 355 AWTW 358


>sp|GB_MUHVS|ENVELOPE glycoprotein B|Murid herpesvirus 1 (strain Smith)

Query: 5 AWTW 8
AWTW
Sbjct: 252 AWTW 255


>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)

Query: 1 LMWLAWTWMM 10
+ W W W++
Sbjct: 1293 IKWPWWVWLI 1302


>sp|R1AB_CVPFS|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 5 AWTWMM 10
AW WM+
Sbjct: 213 AWKWML 218


>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42

Query: 1 LMWLAWTWMM 10
+ WL TW M
Sbjct: 258 IQWLTCTWGM 267


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 2 MWLAWTW 8
++L+W+W
Sbjct: 2047 IYLSWSW 2053


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 2 MWLAWTW 8
++L+W+W
Sbjct: 2047 IYLSWSW 2053


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 2 MWLAWTW 8
++L+W+W
Sbjct: 2048 IYLSWSW 2054


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 2 MWLAWTW 8
++L+W+W
Sbjct: 2047 IYLSWSW 2053


>sp|L_EBLV2|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 2 (strain

Query: 2 MWLAWTW 8
++L+W+W
Sbjct: 2047 IYLSWSW 2053


>sp|NCAP_CHAV|NUCLEOPROTEIN virus (strain I653514) (CHPV)

Query: 1 LMWLAW 6
++WLAW
Sbjct: 377 VVWLAW 382


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 2 MWLAWTWMM 10
+W W W++
Sbjct: 1977 LWEVWDWVL 1985


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 2 MWLAWTW 8
++L+W+W
Sbjct: 2047 IYLSWSW 2053


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 2 MWLAWTW 8
++L+W+W
Sbjct: 2047 IYLSWSW 2053


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)

Query: 2 MWLAWTW 8
++L+W+W
Sbjct: 2047 IYLSWSW 2053


>sp|RDRP_CPMV1|RNA-DIRECTED RNA polymerase|Cryphonectria parasitica mitovirus 1 (strain

Query: 4 LAWTWMM 10
L W WMM
Sbjct: 298 LLWMWMM 304


>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32

Query: 1 LMWLAWTWMM 10
+ WL TW M
Sbjct: 257 IQWLTCTWGM 266


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 2 MWLAWTW 8
++L+W+W
Sbjct: 2047 IYLSWSW 2053


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)

Query: 2 MWLAWTW 8
++L+W+W
Sbjct: 2048 IYLSWSW 2054


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 2 MWLAWTW 8
++L+W+W
Sbjct: 2047 VYLSWSW 2053


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 2 MWLAWTW 8
++L+W+W
Sbjct: 2047 VYLSWSW 2053


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 2 MWLAWTW 8
++L+W+W
Sbjct: 2047 VYLSWSW 2053




2|SequenceR|15|6|KCLSPLMWLA

>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)

Query: 1 KCLSPLMWL 9
K L+PLMW+
Sbjct: 616 KVLNPLMWI 624


>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain

Query: 1 KCLSPLMWL 9
K L+PLMW+
Sbjct: 616 KVLNPLMWI 624


>sp|YL092_MIMIV|PUTATIVE ankyrin repeat protein L92|Acanthamoeba polyphaga mimivirus

Query: 4 SPLMWL 9
+PLMWL
Sbjct: 74 TPLMWL 79


>sp|HELI_ALHV1|DNA replication helicase|Alcelaphine herpesvirus 1 (strain C500)

Query: 3 LSPLMWLA 10
L+PL WLA
Sbjct: 394 LTPLEWLA 401


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1 KCLSPLMWL 9
KC P +WL
Sbjct: 1302 KCAVPRLWL 1310


>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)

Query: 1 KCLSPLMWL 9
KCL P++++
Sbjct: 111 KCLGPILYI 119


>sp|UL95_EHV2|GENE 34 protein|Equine herpesvirus 2 (strain 86/87)

Query: 5 PLMWL 9
PLMWL
Sbjct: 175 PLMWL 179


>sp|POL_SMRVH|GAG-PRO-POL polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 4 SPLMWL 9
SPL+WL
Sbjct: 1352 SPLLWL 1357


>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 KCLSPLMWL 9
KC+ P++++
Sbjct: 111 KCIGPILYI 119


>sp|ENV_WDSV|ENVELOPE glycoprotein|Walleye dermal sarcoma virus (WDSV)

Query: 2 CLSPLMWL 9
C PL+W+
Sbjct: 860 CTIPLLWV 867


>sp|VME1_SARS2|MEMBRANE protein|Severe acute respiratory syndrome coronavirus

Query: 2 CLSPLMWLA 10
CL LMWL+
Sbjct: 86 CLVGLMWLS 94


>sp|POLN_KYMVJ|NON-STRUCTURAL replication polyprotein|Kennedya yellow mosaic virus (strain

Query: 3 LSPLMWLA 10
L P MWLA
Sbjct: 543 LQPPMWLA 550


>sp|VME1_BCHK9|MEMBRANE protein|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 2 CLSPLMWLA 10
C+S +MWL+
Sbjct: 87 CISGIMWLS 95




3|SequenceR|20|11|AALSFKCLSP

>sp|Y071_OSHVF|UNCHARACTERIZED protein ORF71|Ostreid herpesvirus 1 (isolate France)

Query: 3 LSFKCLSP 10
L +KC+SP
Sbjct: 35 LRYKCMSP 42


>sp|SPIKE_ADE1P|FIBER protein|Human adenovirus B serotype 11

Query: 3 LSFKCLSP 10
L+ KCL+P
Sbjct: 46 LTLKCLTP 53


>sp|SPIKE_ADE1A|FIBER protein|Human adenovirus B serotype 11

Query: 3 LSFKCLSP 10
L+ KCL+P
Sbjct: 46 LTLKCLTP 53


>sp|NSP1_ROTAP|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Cow/South/Africa/Offal

Query: 5 FKCLSP 10
FKCL P
Sbjct: 395 FKCLEP 400


>sp|SPIKE_ADE07|FIBER protein|Human adenovirus B serotype 7

Query: 3 LSFKCLSP 10
L+ KCL+P
Sbjct: 64 LTLKCLTP 71


>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2

Query: 2 ALSFKCLSP 10
A+ F CL+P
Sbjct: 296 AVEFHCLAP 304


>sp|POLG_GBVB|GENOME polyprotein|Hepatitis GB virus B (GBV-B)

Query: 1 AALSFKCL 8
A L+FKCL
Sbjct: 1755 ACLTFKCL 1762




4|SequenceR|25|16|PKAPLAALSF

>sp|POL2_CNSV|RNA2 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 1 PKAPLAALSF 10
P+AP A +SF
Sbjct: 743 PRAPFAGMSF 752




5|SequenceR|30|21|CSINEPKAPL

>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)

Query: 1 CSINEPKAPL 10
CS+N KAPL
Sbjct: 1212 CSVNFTKAPL 1221


>sp|RDRP_APRVF|RNA-DIRECTED RNA polymerase VP2|Aedes pseudoscutellaris reovirus (isolate

Query: 1 CSINEPK 7
C+I+EPK
Sbjct: 906 CTIDEPK 912


>sp|ICP46_IIV6|IMMEDIATE-EARLY protein ICP-46 homolog|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 CSINEPKAPL 10
CS N P+ PL
Sbjct: 64 CSDNPPQTPL 73


>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)

Query: 1 CSINEPKAPL 10
CS+N KAP
Sbjct: 1208 CSVNFTKAPF 1217


>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)

Query: 1 CSINEPKAPL 10
CS+N KAP
Sbjct: 1208 CSVNFTKAPF 1217


>sp|POL2_TOTV|RNA2 polyprotein|Tomato torrado virus (isolate Solanum

Query: 1 CSINEPKAPL 10
CS N+P P+
Sbjct: 118 CSSNDPTNPV 127


>sp|SPIKE_CVPIA|SPIKE glycoprotein|Porcine hemagglutinating encephalomyelitis virus (strain

Query: 1 CSINEPKAP 9
C++N KAP
Sbjct: 1207 CAVNYTKAP 1215


>sp|SPIKE_CVP67|SPIKE glycoprotein|Porcine hemagglutinating encephalomyelitis virus (strain

Query: 1 CSINEPKAP 9
C++N KAP
Sbjct: 1207 CAVNYTKAP 1215


>sp|SPIKE_CVBV|SPIKE glycoprotein|Bovine coronavirus (strain vaccine) (BCoV)

Query: 1 CSINEPKAP 9
C++N KAP
Sbjct: 1221 CAVNYTKAP 1229


>sp|SPIKE_CVBQ|SPIKE glycoprotein|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 CSINEPKAP 9
C++N KAP
Sbjct: 1221 CAVNYTKAP 1229


>sp|SPIKE_CVBM|SPIKE glycoprotein|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 CSINEPKAP 9
C++N KAP
Sbjct: 1221 CAVNYTKAP 1229


>sp|SPIKE_CVBEN|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 CSINEPKAP 9
C++N KAP
Sbjct: 1221 CAVNYTKAP 1229


>sp|SPIKE_CVBLS|SPIKE glycoprotein|Bovine coronavirus (strain LSU-94LSS-051) (BCoV-LSU)

Query: 1 CSINEPKAP 9
C++N KAP
Sbjct: 1221 CAVNYTKAP 1229


>sp|SPIKE_CVBOK|SPIKE glycoprotein|Bovine coronavirus (strain OK-0514) (BCoV)

Query: 1 CSINEPKAP 9
C++N KAP
Sbjct: 1221 CAVNYTKAP 1229


>sp|SPIKE_CVBLY|SPIKE glycoprotein|Bovine coronavirus (strain LY-138) (BCoV)

Query: 1 CSINEPKAP 9
C++N KAP
Sbjct: 1221 CAVNYTKAP 1229


>sp|SPIKE_CVBLU|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 CSINEPKAP 9
C++N KAP
Sbjct: 1221 CAVNYTKAP 1229


>sp|SPIKE_CVBF|SPIKE glycoprotein|Bovine coronavirus (strain F15) (BCoV)

Query: 1 CSINEPKAP 9
C++N KAP
Sbjct: 1221 CAVNYTKAP 1229


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 1 CSINEPKAP 9
C++N KAP
Sbjct: 1211 CAVNYTKAP 1219


>sp|VF050_IIV6|UNCHARACTERIZED protein 050L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 CSINEPKAP 9
CSI EP+ P
Sbjct: 182 CSIVEPQIP 190


>sp|SPIKE_CVRSD|SPIKE glycoprotein|Rat coronavirus (strain 681) (RCV-SDAV)

Query: 1 CSINEPKAP 9
C++N KAP
Sbjct: 1213 CAVNYTKAP 1221


>sp|SPIKE_CVMA5|SPIKE glycoprotein|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 CSINEPKAP 9
C++N KAP
Sbjct: 1177 CAVNYTKAP 1185


>sp|SPIKE_CVMJH|SPIKE glycoprotein|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 CSINEPKAP 9
C++N KAP
Sbjct: 1088 CAVNYTKAP 1096


>sp|POLG_GBVB|GENOME polyprotein|Hepatitis GB virus B (GBV-B)

Query: 1 CSINEPKAP 9
C + EPK P
Sbjct: 2026 CYLGEPKTP 2034


>sp|SPIKE_CVMJC|SPIKE glycoprotein|Murine coronavirus (strain JHMV /

Query: 1 CSINEPKAP 9
C++N KAP
Sbjct: 1229 CAVNYTKAP 1237


>sp|SPIKE_CVM4|SPIKE glycoprotein|Murine coronavirus (strain 4) (MHV-4)

Query: 1 CSINEPKAP 9
C++N KAP
Sbjct: 1229 CAVNYTKAP 1237




6|SequenceR|35|26|RYYYVCSINE

>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)

Query: 1 RYYYVCSINE 10
+ YYVC I+E
Sbjct: 239 KSYYVCDISE 248


>sp|POLN_ABPVR|REPLICASE polyprotein|Acute bee paralysis virus (strain

Query: 3 YYVCSIN 9
YY CS+N
Sbjct: 109 YYPCSLN 115




7|SequenceR|40|31|CTLNKRYYYV

>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate

Query: 1 CTLNKRYYYV 10
CT+NK YY+
Sbjct: 85 CTVNKTLYYI 94


>sp|GLYC_TAMVU|PRE-GLYCOPROTEIN polyprotein GP complex|Tamiami mammarenavirus (isolate Rat/United

Query: 1 CTLNKRYYYV 10
C LNK Y+ V
Sbjct: 85 CKLNKTYFLV 94


>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)

Query: 1 CTLNKRYYYV 10
C LN +YY+
Sbjct: 92 CMLNNSFYYM 101


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 5 KRYYYV 10
KRYYY+
Sbjct: 2811 KRYYYL 2816


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 5 KRYYYV 10
KRYYY+
Sbjct: 2807 KRYYYL 2812


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 5 KRYYYV 10
KRYYY+
Sbjct: 2809 KRYYYL 2814


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 5 KRYYYV 10
KRYYY+
Sbjct: 2807 KRYYYL 2812


>sp|VGA8_ALHV1|UNCHARACTERIZED gene A8 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 CTLNKR 6
CTLN+R
Sbjct: 597 CTLNRR 602


>sp|UL92_SHV21|GENE 31 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 CTLNKRYYYV 10
CT NK+Y Y+
Sbjct: 175 CTKNKKYDYI 184


>sp|UL92_EHV2|GENE 31 protein|Equine herpesvirus 2 (strain 86/87)

Query: 1 CTLNKRY 7
CT NKRY
Sbjct: 254 CTKNKRY 260


>sp|MVP1_BYVU|MOVEMENT protein Hsp70h|Beet yellows virus (isolate Ukraine)

Query: 1 CTLNKRYYY 9
C LNKR ++
Sbjct: 443 CRLNKRIFF 451


>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 CTLNKRY 7
CTL K+Y
Sbjct: 2798 CTLKKQY 2804


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 CTLNKRY 7
CTL K+Y
Sbjct: 2704 CTLKKQY 2710


>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 CTLNKRY 7
CTL K+Y
Sbjct: 2827 CTLKKQY 2833


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 CTLNKRY 7
CTL K+Y
Sbjct: 2721 CTLKKQY 2727


>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 CTLNKRY 7
CTL K+Y
Sbjct: 2828 CTLKKQY 2834


>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 CTLNKRY 7
CTL K+Y
Sbjct: 2828 CTLKKQY 2834


>sp|RPOA_LDVP|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 1 CTLNKRY 7
CTL K+Y
Sbjct: 2528 CTLKKQY 2534


>sp|RPOA_LDVC|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 1 CTLNKRY 7
CTL K+Y
Sbjct: 2549 CTLKKQY 2555


>sp|YO13_ADEG1|UNCHARACTERIZED protein ORF13|Fowl adenovirus A serotype 1

Query: 1 CTLNKRYYYV 10
C LNK+ +++
Sbjct: 249 CRLNKKTFHI 258


>sp|044L_IIV3|PUTATIVE serine/threonine-protein kinase 040L|Invertebrate iridescent

Query: 1 CTLNKRYYY 9
C L+ YYY
Sbjct: 27 CNLSDYYYY 35


>sp|SUNT_BPSPB|SUBLANCIN-168-PROCESSING and transport ATP-binding protein|Bacillus phage SPbeta (Bacillus

Query: 1 CTLNKRYYY 9
C L+K+Y Y
Sbjct: 602 CNLDKQYSY 610


>sp|NCAP_BEFVB|NUCLEOPROTEIN ephemeral fever virus (strain

Query: 1 CTLNKR 6
CTLNK+
Sbjct: 3 CTLNKK 8




8|SequenceR|45|36|GPSWTCTLNK

>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 1 GPSWTC 6
GP WTC
Sbjct: 981 GPVWTC 986


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 1 GPSWTC 6
GP WTC
Sbjct: 981 GPVWTC 986


>sp|VNS1_BTV2A|NON-STRUCTURAL protein NS1|Bluetongue virus 2 (isolate USA)

Query: 2 PSWTCT 7
P WTC+
Sbjct: 26 PQWTCS 31


>sp|VNS1_BTV1A|NON-STRUCTURAL protein NS1|Bluetongue virus 1 (isolate Australia)

Query: 2 PSWTCT 7
P WTC+
Sbjct: 26 PQWTCS 31


>sp|VNS1_BTV17|NON-STRUCTURAL protein NS1|Bluetongue virus 17 (isolate USA)

Query: 2 PSWTCT 7
P WTC+
Sbjct: 26 PQWTCS 31


>sp|VNS1_BTV13|NON-STRUCTURAL protein NS1|Bluetongue virus 13 (isolate USA)

Query: 2 PSWTCT 7
P WTC+
Sbjct: 26 PQWTCS 31


>sp|VNS1_BTV11|NON-STRUCTURAL protein NS1|Bluetongue virus 11 (isolate USA)

Query: 2 PSWTCT 7
P WTC+
Sbjct: 26 PQWTCS 31


>sp|VNS1_BTV10|NON-STRUCTURAL protein NS1|Bluetongue virus 10 (isolate USA)

Query: 2 PSWTCT 7
P WTC+
Sbjct: 26 PQWTCS 31


>sp|VNS1_BTV20|NON-STRUCTURAL protein NS1|Bluetongue virus 20 (isolate Australia)

Query: 2 PSWTCT 7
P WTC+
Sbjct: 26 PQWTCS 31


>sp|VNS1_EHDV2|NON-STRUCTURAL protein NS1|Epizootic hemorrhagic disease virus 2

Query: 2 PSWTCT 7
P WTC+
Sbjct: 26 PQWTCS 31


>sp|VNS1_BTV1S|NON-STRUCTURAL protein NS1|Bluetongue virus 1 (isolate South

Query: 2 PSWTCT 7
P WTC+
Sbjct: 26 PQWTCS 31


>sp|VG41_ALHV1|UNCHARACTERIZED gene 41 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 3 SWTCTLN 9
SWTC LN
Sbjct: 52 SWTCVLN 58


>sp|LTP_SHV21|LARGE tegument protein deneddylase|Saimiriine herpesvirus 2 (strain 11)

Query: 1 GPSWTC 6
GP W C
Sbjct: 95 GPKWAC 100


>sp|NCAP_SFTSV|NUCLEOPROTEIN phlebovirus (isolate SFTSV/Human/China/HB29/2010) (Severe

Query: 2 PSWTC 6
P+WTC
Sbjct: 112 PTWTC 116


>sp|NCAP_SFTS|NUCLEOPROTEIN bandavirus (Severe fever with

Query: 2 PSWTC 6
P+WTC
Sbjct: 112 PTWTC 116


>sp|VP2_POVLY|MINOR capsid protein VP2|B-lymphotropic polyomavirus (LPV)

Query: 2 PSWTCTLNK 10
P+W LNK
Sbjct: 303 PTWEVELNK 311


>sp|POLG_TRMVU|GENOME polyprotein|Triticum mosaic virus (isolate Triticum

Query: 1 GPSWTCTLNK 10
G +WT +NK
Sbjct: 2544 GSNWTVGINK 2553


>sp|POL_OMVVS|POL polyprotein|Ovine maedi visna related virus

Query: 2 PSWTC 6
P WTC
Sbjct: 175 PHWTC 179


>sp|POL_CAEVC|POL polyprotein|Caprine arthritis encephalitis virus (strain

Query: 2 PSWTC 6
P WTC
Sbjct: 199 PHWTC 203


>sp|POL_VILVK|GAG-POL polyprotein|Maedi visna virus (strain KV1772)

Query: 2 PSWTC 6
P WTC
Sbjct: 595 PHWTC 599


>sp|POL_VILV2|GAG-POL polyprotein|Maedi visna virus (strain 1514

Query: 2 PSWTC 6
P WTC
Sbjct: 595 PHWTC 599


>sp|POL_VILV1|GAG-POL polyprotein|Maedi visna virus (strain 1514

Query: 2 PSWTC 6
P WTC
Sbjct: 595 PHWTC 599


>sp|POL_VILV|GAG-POL polyprotein|Maedi visna virus (strain 1514)

Query: 2 PSWTC 6
P WTC
Sbjct: 595 PHWTC 599


>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48

Query: 3 SWTCTLNK 10
SWTC K
Sbjct: 553 SWTCFFRK 560




9|SequenceR|50|41|YSTEKGPSWT

>sp|VP31_FRG3G|EARLY 31 kDa protein|Frog virus 3 (isolate Goorha)

Query: 1 YSTEKGPS 8
Y T KGPS
Sbjct: 74 YDTNKGPS 81


>sp|NCAP_TUPVT|NUCLEOPROTEIN virus (isolate Tupaia/Thailand/-/1986) (TUPV)

Query: 1 YSTEKGPSW 9
YST + P+W
Sbjct: 293 YSTVRNPAW 301


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 2 STEKGPSW 9
S+EK P W
Sbjct: 4170 SSEKDPEW 4177


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 5 KGPSWT 10
KGP WT
Sbjct: 980 KGPVWT 985


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 2 STEKGPSW 9
S+EK P W
Sbjct: 4170 SSEKDPEW 4177


>sp|L_SVCV|RNA-DIRECTED RNA polymerase L|Spring viremia of carp virus

Query: 1 YSTEKGPSWT 10
Y T++GP W
Sbjct: 1487 YETKEGPIWV 1496


>sp|POLG_TRMVU|GENOME polyprotein|Triticum mosaic virus (isolate Triticum

Query: 1 YSTEKGPSWT 10
Y+T+ G +WT
Sbjct: 2539 YATQAGSNWT 2548


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 5 KGPSWT 10
KGP WT
Sbjct: 980 KGPVWT 985


>sp|VF448_ASFWA|UNCHARACTERIZED protein M448R|African swine fever virus (isolate

Query: 4 EKGPSW 9
E GPSW
Sbjct: 155 EHGPSW 160


>sp|VF448_ASFP4|PUTATIVE RNA-ligase|African swine fever virus (isolate

Query: 4 EKGPSW 9
E GPSW
Sbjct: 155 EHGPSW 160


>sp|RLIG_ASFB7|PUTATIVE RNA-ligase|African swine fever virus (strain

Query: 4 EKGPSW 9
E GPSW
Sbjct: 155 EHGPSW 160


>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain

Query: 2 STEKGPSWT 10
+T+ GPSW+
Sbjct: 866 ATDPGPSWS 874


>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka

Query: 2 STEKGPSWT 10
+T+ GPSW+
Sbjct: 866 ATDPGPSWS 874


>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)

Query: 3 TEKGPSWT 10
TEK P WT
Sbjct: 1744 TEKLPHWT 1751


>sp|HMUDK_BPS10|5-HMDU DNA kinase|Bacillus phage SP10 (Bacillus phage

Query: 1 YSTEKGPSW 9
Y+TE+G W
Sbjct: 600 YATERGYDW 608


>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 STEKGPSWT 10
++ KGP+W+
Sbjct: 378 TSVKGPNWS 386


>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 STEKGPSWT 10
++ KGP+W+
Sbjct: 378 TSVKGPNWS 386


>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 STEKGPSWT 10
++ KGP+W+
Sbjct: 378 TSVKGPNWS 386


>sp|VF448_ASFM2|PUTATIVE RNA-ligase|African swine fever virus (isolate

Query: 4 EKGPSW 9
E GPSW
Sbjct: 153 EHGPSW 158


>sp|RLIG_ASFK5|PUTATIVE RNA-ligase|African swine fever virus (isolate

Query: 4 EKGPSW 9
E GPSW
Sbjct: 155 EHGPSW 160




10|SequenceR|55|46|VTYQTYSTEK

***** No hits found ******


11|SequenceR|60|51|AYTRKVTYQT

>sp|POL1_TOTV|RNA1 polyprotein|Tomato torrado virus (isolate Solanum

Query: 1 AYTRKVTYQ 9
Y KVTYQ
Sbjct: 1008 GYLEKVTYQ 1016




12|SequenceR|65|56|HKEGFAYTRK

>sp|Y080_AFV1Y|UNCHARACTERIZED protein ORF80|Acidianus filamentous virus 1 (isolate

Query: 2 KEGFAYTR 9
KE F YTR
Sbjct: 14 KENFGYTR 21


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 2 KEGFAYTRK 10
K+GF Y++K
Sbjct: 821 KQGFVYSQK 829


>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 KEGFAYTRK 10
K+GF Y++K
Sbjct: 821 KQGFVYSQK 829


>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)

Query: 2 KEGFAYTRK 10
K+GF Y++K
Sbjct: 821 KQGFVYSQK 829


>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus

Query: 2 KEGFAYTRK 10
K+GF Y++K
Sbjct: 821 KQGFVYSQK 829


>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate

Query: 2 KEGFAYTRK 10
K+GF Y++K
Sbjct: 821 KQGFVYSQK 829


>sp|RP147_VACCW|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Western Reserve)

Query: 2 KEGFAYTRK 10
K+GF Y++K
Sbjct: 821 KQGFVYSQK 829


>sp|GE_GAHVM|ENVELOPE glycoprotein E|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 HKEGFAY 7
HK GF Y
Sbjct: 354 HKPGFGY 360


>sp|P40_TRVPP|40 kDa protein|Tobacco rattle virus (isolate PpK20)

Query: 1 HKEGFAYTRK 10
+K+G Y+RK
Sbjct: 73 NKDGHCYSRK 82


>sp|TOP2_IIV3|DNA topoisomerase 2|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 HKEGFAYT 8
H++GF Y+
Sbjct: 557 HRQGFIYS 564




13|SequenceR|70|61|TTCNDHKEGF

>sp|POLG_AEVVR|GENOME polyprotein|Avian encephalomyelitis virus (strain Van

Query: 1 TTCNDHKEG 9
TT +DH EG
Sbjct: 1084 TTSDDHSEG 1092


>sp|POLG_AEVL2|GENOME polyprotein|Avian encephalomyelitis virus (strain L2Z)

Query: 1 TTCNDHKEG 9
TT +DH EG
Sbjct: 1084 TTSDDHSEG 1092


>sp|POLG_AEVCA|GENOME polyprotein|Avian encephalomyelitis virus (strain Calnek

Query: 1 TTCNDHKEG 9
TT +DH EG
Sbjct: 1084 TTSDDHSEG 1092


>sp|TRM3_ALHV1|TRIPARTITE terminase subunit 3|Alcelaphine herpesvirus 1 (strain C500)

Query: 3 CNDHKEGF 10
C++HKE F
Sbjct: 377 CSNHKEDF 384


>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P

Query: 3 CNDHKEGF 10
C DH+E F
Sbjct: 378 CADHREDF 385


>sp|L_DMSVA|RNA-DIRECTED RNA polymerase L|Drosophila melanogaster sigma virus (isolate

Query: 5 DHKEGF 10
DH+EGF
Sbjct: 996 DHEEGF 1001


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 TTCNDHKEGF 10
T ND KEGF
Sbjct: 6913 TKENDSKEGF 6922


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 TTCNDHKEGF 10
T ND KEGF
Sbjct: 6921 TKENDSKEGF 6930


>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)

Query: 3 CNDHKEGF 10
CN H EG+
Sbjct: 359 CNKHGEGY 366


>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)

Query: 4 NDHKEGF 10
NDH +GF
Sbjct: 82 NDHYQGF 88


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 TTCNDHKEGF 10
T ND KEGF
Sbjct: 6915 TKENDSKEGF 6924


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 4 NDHKEGF 10
ND KEGF
Sbjct: 6912 NDSKEGF 6918


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 TTCNDHKEGF 10
T ND KEGF
Sbjct: 6938 TKENDSKEGF 6947


>sp|VCLAP_EHV2|CARD domain-containing protein E10|Equine herpesvirus 2 (strain 86/87)

Query: 3 CNDHKEGF 10
C DH GF
Sbjct: 80 CQDHPRGF 87


>sp|MVP_CYLCV|PUTATIVE movement protein|Cestrum yellow leaf curling virus

Query: 4 NDHKEGF 10
ND K+GF
Sbjct: 191 NDQKQGF 197


>sp|VP10_MYRV9|UNCHARACTERIZED protein VP10|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 2 TCNDHKEGF 10
TCN+ +GF
Sbjct: 168 TCNNFGDGF 176


>sp|TRM3_SHV21|TRIPARTITE terminase subunit 3|Saimiriine herpesvirus 2 (strain 11)

Query: 3 CNDHKEGF 10
C DHK+ F
Sbjct: 374 CPDHKDDF 381


>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)

Query: 4 NDHKEGF 10
NDH +GF
Sbjct: 130 NDHYQGF 136


>sp|NING_BPP21|PROTEIN ninG|Enterobacteria phage P21 (Bacteriophage 21)

Query: 3 CNDHKEG 9
CN HK G
Sbjct: 141 CNQHKSG 147


>sp|NING_BPP22|PROTEIN ninG|Salmonella phage P22 (Bacteriophage P22)

Query: 3 CNDHKEG 9
CN HK G
Sbjct: 140 CNQHKSG 146


>sp|NING_LAMBD|PROTEIN ninG|Escherichia phage lambda (Bacteriophage lambda)

Query: 3 CNDHKEG 9
CN HK G
Sbjct: 141 CNQHKSG 147


>sp|NING_BPVT2|PROTEIN ninG|Enterobacteria phage VT2-Sa (Bacteriophage VT2-Sa)

Query: 3 CNDHKEG 9
CN HK G
Sbjct: 138 CNQHKSG 144


>sp|NING_BP933|PROTEIN ninG|Escherichia phage 933W (Bacteriophage 933W)

Query: 3 CNDHKEG 9
CN HK G
Sbjct: 138 CNQHKSG 144


>sp|NING_BPH19|PROTEIN ninG|Enterobacteria phage H19B (Bacteriophage H19B)

Query: 3 CNDHKEG 9
CN HK G
Sbjct: 138 CNQHKSG 144


>sp|RING1_BPCA1|RING protein 1|Bacteroides phage crAss001 (Bacteroides phage

Query: 4 NDHKEG 9
+DHKEG
Sbjct: 96 HDHKEG 101


>sp|PHOSP_PPRV|PHOSPHOPROTEIN virus (PPRV)

Query: 2 TCNDHKEGF 10
TCND + G
Sbjct: 87 TCNDSEAGL 95


>sp|US9_EHV4|ENVELOPE protein US9 homolog|Equine herpesvirus 4 (strain 1942)

Query: 1 TTCNDH 6
TTC DH
Sbjct: 76 TTCGDH 81


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 3 CNDHK 7
CNDH+
Sbjct: 5426 CNDHR 5430


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 3 CNDHK 7
CNDH+
Sbjct: 5433 CNDHR 5437


>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)

Query: 3 CNDHK 7
CNDHK
Sbjct: 236 CNDHK 240


>sp|Z_MACHU|RING finger protein Z|Machupo virus (MACV)

Query: 2 TCNDH 6
TCNDH
Sbjct: 51 TCNDH 55




14|SequenceR|75|66|STSSNTTCND

>sp|NEF_HV1SE|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 2 TSSNTTCND 10
TSSNT N+
Sbjct: 44 TSSNTAANN 52


>sp|NEF_HV1S1|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 2 TSSNTTCND 10
TSSNT N+
Sbjct: 46 TSSNTAANN 54


>sp|NEF_HV1RH|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 2 TSSNTTCND 10
TSSNT N+
Sbjct: 44 TSSNTAANN 52




15|SequenceR|80|71|SARNESTSSN

***** No hits found ******


16|SequenceR|85|76|LFFSCSARNE

>sp|REP_CDDV1|REPLICATION-ASSOCIATED protein|Chaetoceros diatodnavirus 1 (Chaetoceros setoense

Query: 1 LFFSCSA 7
LFF CSA
Sbjct: 234 LFFGCSA 240


>sp|VE1_BPV2|REPLICATION protein E1|Bos taurus papillomavirus 2 (Bovine

Query: 3 FSCSARN 9
F+CSARN
Sbjct: 593 FTCSARN 599


>sp|VE1_BPV1|REPLICATION protein E1|Bovine papillomavirus type 1

Query: 3 FSCSARN 9
F+CSARN
Sbjct: 594 FTCSARN 600


>sp|VE1_PAPVE|REPLICATION protein E1|European elk papillomavirus (EEPV)

Query: 3 FSCSARN 9
F+CSARN
Sbjct: 600 FTCSARN 606




17|SequenceR|90|81|ITIRPLFFSC

>sp|ICP4_SUHVK|MAJOR viral transcription factor ICP4|Suid herpesvirus 1 (strain Kaplan)

Query: 3 IRPLFFSC 10
+RP+F SC
Sbjct: 1305 LRPVFVSC 1312


>sp|ICP4_SUHVF|MAJOR viral transcription factor ICP4|Suid herpesvirus 1 (strain

Query: 3 IRPLFFSC 10
+RP+F SC
Sbjct: 1321 LRPVFVSC 1328


>sp|007R_IIV3|UNCHARACTERIZED protein 007R|Invertebrate iridescent virus 3 (IIV-3)

Query: 4 RPLFFSC 10
+PL FSC
Sbjct: 213 KPLVFSC 219


>sp|SPIKE_WBV24|SPIKE glycoprotein|White bream virus (isolate Blicca

Query: 1 ITIRPLFFSC 10
IT+ PL F+C
Sbjct: 728 ITLDPLVFNC 737




18|SequenceR|95|86|TYNDPITIRP

>sp|VL2_HPV32|MINOR capsid protein L2|Human papillomavirus type 32

Query: 2 YNDPITIRP 10
Y+DP T+RP
Sbjct: 166 YSDPFTLRP 174


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 TYNDPITIR 9
TY+DP+ +R
Sbjct: 2075 TYSDPLALR 2083


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 TYNDPITIR 9
TY+DP+ +R
Sbjct: 2076 TYSDPLALR 2084


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 TYNDPITIR 9
TY+DP+ +R
Sbjct: 2076 TYSDPLALR 2084


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 1 TYNDPITIRP 10
T ++PIT++P
Sbjct: 1665 TSSEPITLKP 1674


>sp|RDRP_LOLV|RNA-DIRECTED RNA polymerase|Lolium latent virus (isolate Lolium/USA/US1/-)

Query: 2 YNDPIT 7
YNDPIT
Sbjct: 11 YNDPIT 16


>sp|SPIN_CBEPV|SPINDOLIN biennis entomopoxvirus (CbEPV)

Query: 2 YNDPITIRP 10
YN+ +T+RP
Sbjct: 195 YNNTVTLRP 203


>sp|HEMA_RACVI|PROTEIN A56|Raccoon poxvirus (RCN)

Query: 1 TYNDPITIRP 10
TYN+PI++
Sbjct: 243 TYNEPISVSS 252


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 TYNDPITIR 9
TY+DP+ ++
Sbjct: 2074 TYSDPLALK 2082


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 TYNDPITIR 9
TY+DP+ ++
Sbjct: 2074 TYSDPLALK 2082


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 TYNDPITIR 9
TY+DP+ ++
Sbjct: 2074 TYSDPLALK 2082


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 TYNDPITIR 9
TY+DP+ ++
Sbjct: 2074 TYSDPLALK 2082


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 TYNDPITIR 9
TY+DP+ ++
Sbjct: 2074 TYSDPLALK 2082


>sp|CAPSP_ADEP3|PENTON protein|Porcine adenovirus A serotype 3

Query: 3 NDPITIRP 10
DP+T RP
Sbjct: 359 QDPVTFRP 366


>sp|POLN_OYMV|NON-STRUCTURAL replication polyprotein|Ononis yellow mosaic virus

Query: 1 TYNDPITI 8
TY+DP+T+
Sbjct: 1092 TYSDPVTV 1099


>sp|POLG_PESV|GENOME polyprotein|Porcine enteric sapovirus (isolate Swine/United

Query: 3 NDPITIRP 10
DP+ IRP
Sbjct: 42 QDPVVIRP 49


>sp|PORTL_BPP22|PORTAL protein|Salmonella phage P22 (Bacteriophage P22)

Query: 2 YNDPITIRP 10
Y DP+T P
Sbjct: 235 YQDPVTGEP 243


>sp|005L_IIV3|UNCHARACTERIZED protein 005L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 TYNDPITIRP 10
+Y+ P T+RP
Sbjct: 178 SYHQPTTLRP 187


>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)

Query: 2 YNDPITI 8
YNDP+ +
Sbjct: 709 YNDPVAV 715


>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)

Query: 2 YNDPITI 8
YNDP+ +
Sbjct: 709 YNDPVAV 715




19|SequenceR|100|91|AEVEITYNDP

>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 4 EITYNDP 10
E+TY+DP
Sbjct: 252 EVTYDDP 258


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 1 AEVEITYNDP 10
A+VEIT N P
Sbjct: 455 AKVEITPNSP 464


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 1 AEVEITYNDP 10
A+VEIT N P
Sbjct: 455 AKVEITPNSP 464


>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)

Query: 2 EVEITYNDP 10
EV+I NDP
Sbjct: 137 EVQIVRNDP 145


>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 4 EITYNDP 10
E+TY DP
Sbjct: 253 EVTYEDP 259


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 1 AEVEITYNDP 10
A+VE+T N P
Sbjct: 451 AKVEVTPNSP 460


>sp|NCAP_IHNVR|NUCLEOPROTEIN hematopoietic necrosis virus (strain

Query: 1 AEVEITYNDP 10
A +E+T+ DP
Sbjct: 101 APLEVTFADP 110


>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)

Query: 2 EVEITYNDP 10
EV+I NDP
Sbjct: 142 EVQIVRNDP 150


>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1

Query: 1 AEVEITYNDP 10
AEV + Y DP
Sbjct: 383 AEVFVRYGDP 392


>sp|SHUT_ADEGX|SHUTOFF protein|Fowl adenovirus C serotype 10

Query: 5 ITYNDP 10
ITYNDP
Sbjct: 423 ITYNDP 428




20|SequenceR|105|96|GDGNEAEVEI

>sp|PRO_BPHK7|PROHEAD protease|Enterobacteria phage HK97 (Bacteriophage HK97)

Query: 1 GDGNEAEV 8
GDGNEA++
Sbjct: 202 GDGNEAQI 209


>sp|KITH_MYXVL|THYMIDINE kinase|Myxoma virus (strain Lausanne) (MYXV)

Query: 3 GNEAEVEI 10
GNE E+EI
Sbjct: 154 GNETEIEI 161


>sp|KITH_MYXVU|THYMIDINE kinase|Myxoma virus (strain Uriarra) (MYXV)

Query: 3 GNEAEVEI 10
GNE E+EI
Sbjct: 154 GNETEIEI 161


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 1 GDGNEAEVE 9
GD NE E+E
Sbjct: 1813 GDFNEGEIE 1821


>sp|VP7_ROTB9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 4 NEAEVEI 10
NEAE+EI
Sbjct: 90 NEAEIEI 96


>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 GDGNEAEVEI 10
G NE+E+EI
Sbjct: 450 GGKNESEIEI 459


>sp|VF175_ASFM2|UNCHARACTERIZED protein B175L|African swine fever virus (isolate

Query: 2 DGNEAEVE 9
+G+EAEVE
Sbjct: 33 NGDEAEVE 40


>sp|VF175_ASFK5|UNCHARACTERIZED protein B175L|African swine fever virus (isolate

Query: 2 DGNEAEVE 9
+G+EAEVE
Sbjct: 33 NGDEAEVE 40


>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5

Query: 3 GNEAEVEI 10
GN AEVEI
Sbjct: 202 GNGAEVEI 209


>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2

Query: 3 GNEAEVEI 10
GN AEVEI
Sbjct: 201 GNGAEVEI 208


>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 GDGNEAE 7
G+GNE+E
Sbjct: 454 GEGNESE 460




21|SequenceR|110|101|HSKIVGDGNE

>sp|GH_SHV21|ENVELOPE glycoprotein H|Saimiriine herpesvirus 2 (strain 11)

Query: 1 HSKIVGDGN 9
HS GDGN
Sbjct: 656 HSPFFGDGN 664


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 HSKIVGDGNE 10
H+ +VG+G+E
Sbjct: 435 HTGVVGEGSE 444


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 HSKIVGDGNE 10
H+ +VG+G+E
Sbjct: 435 HTGVVGEGSE 444


>sp|RDRP_ROTPY|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Pig/Mexico/YM/1983/G11P9[7])

Query: 1 HSKIVGDGNE 10
HS VGD N+
Sbjct: 152 HSNDVGDANK 161


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 HSKIVGDGN 9
H+ +VGDG+
Sbjct: 2029 HNMLVGDGS 2037


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 HSKIVGDGN 9
H+ +VGDG+
Sbjct: 2046 HNMLVGDGS 2054


>sp|DPOL_BPML5|DNA polymerase|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 3 KIVGDGNE 10
K+V DGNE
Sbjct: 305 KLVEDGNE 312




22|SequenceR|115|106|RWYTMHSKIV

>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 1 RWYTMH 6
+WYTMH
Sbjct: 1710 KWYTMH 1715


>sp|VE2_BPV2|REGULATORY protein E2|Bos taurus papillomavirus 2 (Bovine

Query: 2 WYTMHSKI 9
WYT++SK+
Sbjct: 130 WYTVYSKL 137


>sp|VE1_MMPV1|REPLICATION protein E1|Macaca mulata papillomavirus 1 (Rhpv

Query: 1 RWYTMHSKIV 10
RW +HS++V
Sbjct: 551 RWMYLHSRMV 560


>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35

Query: 1 RWYTMHSKIV 10
RW +HS++V
Sbjct: 561 RWPYLHSRVV 570


>sp|CAPSD_CDDV1|CAPSID protein|Chaetoceros diatodnavirus 1 (Chaetoceros setoense

Query: 1 RWYTMH 6
RWYT H
Sbjct: 269 RWYTEH 274


>sp|088R_FRG3G|PUTATIVE FAD-linked sulfhydryl oxidase 088R|Frog virus 3 (isolate Goorha)

Query: 2 WYTMHS 7
W+TMHS
Sbjct: 36 WFTMHS 41


>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52

Query: 1 RWYTMHSKIV 10
RW +HS++V
Sbjct: 571 RWPYLHSRLV 580


>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31

Query: 1 RWYTMHSKIV 10
RW +HS++V
Sbjct: 555 RWPYLHSRLV 564


>sp|VE1_MNPVA|REPLICATION protein E1|Mastomys natalensis papillomavirus (isolate African

Query: 1 RWYTMHSKI 9
RW +HS+I
Sbjct: 527 RWRYLHSRI 535


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 2 WYTMHSKIV 10
WYT K+V
Sbjct: 1947 WYTFDDKVV 1955


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 2 WYTMHSKIV 10
WYT K+V
Sbjct: 1947 WYTFDDKVV 1955


>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain

Query: 1 RWYTMHSK 8
RWY H K
Sbjct: 781 RWYGKHGK 788


>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54

Query: 1 RWYTMHSKI 9
RW +HS++
Sbjct: 558 RWRYLHSRV 566


>sp|YR528_MIMIV|PUTATIVE 5'-3' exonuclease R528|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 RWYTMHSK 8
RWY H K
Sbjct: 465 RWYYQHEK 472


>sp|NPH2_MSEPV|RNA helicase NPH-II|Melanoplus sanguinipes entomopoxvirus (MsEPV)

Query: 3 YTMHSKI 9
YT+HSKI
Sbjct: 447 YTIHSKI 453


>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse

Query: 2 WYTMH 6
WYT+H
Sbjct: 1735 WYTVH 1739


>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United

Query: 2 WYTMH 6
WYT+H
Sbjct: 1735 WYTVH 1739




23|SequenceR|120|111|AINELRWYTM

>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 3 NELRWYT 9
N LRWYT
Sbjct: 732 NLLRWYT 738


>sp|POL1_TOTV|RNA1 polyprotein|Tomato torrado virus (isolate Solanum

Query: 4 ELRWYTM 10
EL WYT+
Sbjct: 1506 ELHWYTL 1512




24|SequenceR|125|116|PPETKAINEL

>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)

Query: 1 PPETKAINEL 10
PP T+AI E+
Sbjct: 2865 PPGTRAIMEV 2874


>sp|YR058_MIMIV|UNCHARACTERIZED protein R58|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 TKAINEL 10
TKAINEL
Sbjct: 15 TKAINEL 21


>sp|KR73_ICHVA|PROTEIN kinase ORF73|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 PPETKAIN 8
PPET AIN
Sbjct: 475 PPETLAIN 482


>sp|VE2_BPV3|REGULATORY protein E2|Bovine papillomavirus type 3

Query: 1 PPETKAINEL 10
PPETKA L
Sbjct: 313 PPETKAKGRL 322




25|SequenceR|130|121|VRFIKPPETK

>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 RFIKPPET 9
RF++PP +
Sbjct: 386 RFVRPPSS 393


>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 RFIKPPET 9
RF++PP +
Sbjct: 386 RFVRPPSS 393


>sp|1A_OLV2I|REPLICATION protein 1a|Olive latent virus 2 (isolate

Query: 2 RFIKPPETK 10
RF+KP + K
Sbjct: 582 RFVKPADLK 590


>sp|POL_JEMBR|GAG-POL polyprotein|Jembrana disease virus (JDV)

Query: 1 VRFIKPPET 9
+RFI PP T
Sbjct: 1417 MRFIPPPNT 1425


>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 RFIKPPETK 10
RF++ PET+
Sbjct: 21 RFLRSPETE 29


>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 RFIKPPETK 10
RF++ PET+
Sbjct: 21 RFLRSPETE 29


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 1 VRFIKPPET 9
VR ++PP T
Sbjct: 2050 VRVLRPPST 2058


>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 RFIKPPETK 10
RF++ PET+
Sbjct: 21 RFLRSPETE 29


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 1 VRFIKPPET 9
VR ++PP T
Sbjct: 2050 VRVLRPPST 2058


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 1 VRFIKPPET 9
VR ++PP T
Sbjct: 2051 VRVLRPPST 2059


>sp|POL_BIV29|GAG-POL polyprotein|Bovine immunodeficiency virus (strain R29)

Query: 1 VRFIKPPET 9
+RFI PP++
Sbjct: 1460 MRFIPPPDS 1468




26|SequenceR|135|126|GLVPKVRFIK

>sp|VP2_POVSM|MINOR capsid protein VP2|Squirrel monkey polyomavirus

Query: 1 GLVPKVRFI 9
GL+P VRFI
Sbjct: 141 GLMPFVRFI 149


>sp|POL1_BRSV|RNA1 polyprotein|Beet ringspot virus (BRSV) (Tomato

Query: 1 GLVPKVRFI 9
GL+P RF+
Sbjct: 1236 GLLPAARFV 1244




27|SequenceR|140|131|IMRKIGLVPK

>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 2 MRKIGLV 8
MRK+GLV
Sbjct: 295 MRKVGLV 301


>sp|ADPRM_MIMIV|PUTATIVE ADP-ribosyl glycohydrolase L543|Acanthamoeba polyphaga mimivirus

Query: 1 IMRKIGLVP 9
+MR GLVP
Sbjct: 134 LMRLFGLVP 142


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 4 KIGLVPK 10
K+GLVP+
Sbjct: 586 KVGLVPR 592


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 4 KIGLVPK 10
K+GLVP+
Sbjct: 587 KVGLVPR 593




28|SequenceR|145|136|IWEIQIMRKI

>sp|VPR_HV2SB|PROTEIN Vpr|Human immunodeficiency virus type 2

Query: 2 WEIQIMRKI 10
W I+I+R+I
Sbjct: 23 WVIEILREI 31


>sp|VG43_ICHVA|UNCHARACTERIZED protein ORF43|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 IWEIQIMRKI 10
IW + + RKI
Sbjct: 194 IWPLAVTRKI 203


>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)

Query: 1 IWEIQI 6
IWE+Q+
Sbjct: 688 IWEVQV 693




29|SequenceR|150|141|ALEPKIWEIQ

>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka

Query: 1 ALEPKIWEI 9
ALEP WE+
Sbjct: 1225 ALEPDDWEV 1233


>sp|VF268_IIV3|UNCHARACTERIZED protein 074L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 ALEPKIWEI 9
AL+P +W++
Sbjct: 151 ALKPTVWDV 159


>sp|EXLYS_BPDPK|PEPTIDOGLYCAN hydrolase gp181|Pseudomonas phage phiKZ

Query: 4 PKIWEI 9
P+IWE+
Sbjct: 676 PRIWEL 681


>sp|CAPSD_BPPRD|MAJOR capsid protein P3|Enterobacteria phage PRD1 (Bacteriophage PRD1)

Query: 2 LEPKIWEIQ 10
L+PK W Q
Sbjct: 319 LDPKTWAAQ 327


>sp|RDRP_THOGV|RNA-DIRECTED RNA polymerase catalytic subunit|Thogoto virus (isolate SiAr 126)

Query: 1 ALEPKIWEIQ 10
A +P+ W+IQ
Sbjct: 179 ARDPRPWDIQ 188


>sp|RDRP_GLVWB|PROBABLE RNA-directed RNA polymerase|Giardia lamblia virus (isolate Wang)

Query: 3 EPKIWE 8
EPK WE
Sbjct: 1030 EPKAWE 1035


>sp|RDRP_PVMR|RNA replication polyprotein|Potato virus M (strain Russian)

Query: 2 LEPKIW 7
LEP++W
Sbjct: 654 LEPEVW 659


>sp|L_SBVBH|RNA-DIRECTED RNA polymerase L|Bovine Schmallenberg virus (isolate

Query: 2 LEPKIWEI 9
L PK+W I
Sbjct: 1905 LNPKLWYI 1912


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 3 EPKIWEI 9
+PK WE+
Sbjct: 2935 DPKFWEL 2941


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 3 EPKIWEI 9
+PK WE+
Sbjct: 2935 DPKFWEL 2941


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 3 EPKIWEI 9
+PK WE+
Sbjct: 2935 DPKFWEL 2941


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 3 EPKIWEI 9
+PK WE+
Sbjct: 2935 DPKFWEL 2941


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 3 EPKIWEI 9
+PK WE+
Sbjct: 2935 DPKFWEL 2941


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 3 EPKIWEI 9
+PK WE+
Sbjct: 2935 DPKFWEL 2941


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 3 EPKIWEI 9
+PK WE+
Sbjct: 2936 DPKFWEM 2942


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 3 EPKIWEI 9
+PK WE+
Sbjct: 2936 DPKFWEM 2942


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 3 EPKIWEI 9
+PK WE+
Sbjct: 2936 DPKFWEM 2942




30|SequenceR|155|146|DSSVPALEPK

>sp|ITP_EHV1V|INNER tegument protein|Equine herpesvirus 1 (strain V592)

Query: 1 DSSVPALEP 9
D+ VP+LEP
Sbjct: 23 DTEVPSLEP 31


>sp|ITP_EHV1B|INNER tegument protein|Equine herpesvirus 1 (strain Ab4p)

Query: 1 DSSVPALEP 9
D+ VP+LEP
Sbjct: 23 DTEVPSLEP 31


>sp|POLG_HAVS2|GENOME polyprotein|Simian hepatitis A virus genotype

Query: 1 DSSVPALEP 9
D SVP L+P
Sbjct: 2123 DKSVPKLKP 2131


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 DSSVPALEP 9
D SVP L+P
Sbjct: 2121 DKSVPQLKP 2129


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 DSSVPALEP 9
D SVP L+P
Sbjct: 2121 DKSVPQLKP 2129


>sp|GH_EHV1B|ENVELOPE glycoprotein H|Equine herpesvirus 1 (strain Ab4p)

Query: 1 DSSVPALEPK 10
+S++PA PK
Sbjct: 766 NSTIPAFNPK 775


>sp|GH_EHV1|ENVELOPE glycoprotein H|Equine herpesvirus 1 (strain HVS25A)

Query: 1 DSSVPALEPK 10
+S++PA PK
Sbjct: 766 NSTIPAFNPK 775


>sp|L_TUPVT|RNA-DIRECTED RNA polymerase L|Tupaia virus (isolate Tupaia/Thailand/-/1986) (TUPV)

Query: 3 SVPALEPK 10
S PAL PK
Sbjct: 1611 SAPALSPK 1618


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 1 DSSVPALEP 9
D+ PALEP
Sbjct: 1694 DADAPALEP 1702


>sp|NCAP_OLVVA|NUCLEOPROTEIN mammarenavirus (isolate Mouse/Argentina/RIID 3229/1990)

Query: 1 DSSVPALEPK 10
+ +VP++EPK
Sbjct: 532 EGNVPSIEPK 541


>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)

Query: 1 DSSVPALEP 9
DS+ PAL P
Sbjct: 2 DSAAPALSP 10


>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 DSSVPALEPK 10
+S VPA++P+
Sbjct: 637 ESGVPAMQPQ 646


>sp|GH_EHV4|ENVELOPE glycoprotein H|Equine herpesvirus 4 (strain 1942)

Query: 1 DSSVPALEPK 10
+S++PA PK
Sbjct: 773 NSTIPAFNPK 782


>sp|MVP_RRSVT|MOVEMENT and RNA silencing protein|Rice ragged stunt virus (isolate

Query: 4 VPALEP 9
VPALEP
Sbjct: 337 VPALEP 342


>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)

Query: 1 DSSVPALEP 9
DS+ PAL P
Sbjct: 2 DSAAPALSP 10




31|SequenceR|160|151|LTYKLDSSVP

>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 LTYKLDSSVP 10
+ +KLD+S+P
Sbjct: 6057 MGFKLDASIP 6066


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 LTYKLDSSVP 10
+ +KLD++VP
Sbjct: 5966 MGFKLDATVP 5975


>sp|FIBER_BPT7|TAIL fiber protein|Escherichia phage T7 (Bacteriophage T7)

Query: 1 LTYKLDSS 8
LTY+LD S
Sbjct: 9 LTYQLDGS 16


>sp|FIBER_BPT3|TAIL fiber protein|Enterobacteria phage T3 (Bacteriophage T3)

Query: 1 LTYKLDSS 8
LTY+LD S
Sbjct: 9 LTYQLDGS 16


>sp|LTP_ALHV1|LARGE tegument protein deneddylase|Alcelaphine herpesvirus 1 (strain

Query: 2 TYKLDSSV 9
TYKLDS+
Sbjct: 436 TYKLDSTT 443




32|SequenceR|165|156|VTRFRLTYKL

>sp|POLS_IPNVS|STRUCTURAL polyprotein|Infectious pancreatic necrosis virus (strain

Query: 1 VTRFRLTYKL 10
+TR +L+YK+
Sbjct: 305 ITRVKLSYKI 314


>sp|POLS_IPNVN|STRUCTURAL polyprotein|Infectious pancreatic necrosis virus (strain

Query: 1 VTRFRLTYKL 10
+TR +L+YK+
Sbjct: 305 ITRVKLSYKI 314


>sp|CAPSD_HASV|CAPSID protein|Helicoverpa armigera stunt virus (HaSV)

Query: 1 VTRFRLTYK 9
V+ +RLTYK
Sbjct: 238 VSDYRLTYK 246


>sp|YR476_MIMIV|PUTATIVE AAA family ATPase R476|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 TRFRLTYKL 10
T+F+ TYKL
Sbjct: 295 TKFKNTYKL 303




33|SequenceR|170|161|WSTSNVTRFR

>sp|IKBH1_MDBVW|I-KAPPA-B like protein H1|Microplitis demolitor bracovirus (isolate Webb)

Query: 1 WSTSNVTRFR 10
W+TSNV F+
Sbjct: 23 WATSNVLLFK 32


>sp|DNBI_SHV21|MAJOR DNA-binding protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 WSTSNVTR 8
WS NVT+
Sbjct: 1064 WSVENVTK 1071


>sp|Y545_ATV|PUTATIVE transmembrane protein ORF545|Acidianus two-tailed virus (ATV)

Query: 1 WSTSNVT 7
WST NVT
Sbjct: 482 WSTVNVT 488




34|SequenceR|175|166|FNVEMWSTSN

>sp|ITP_EHV1V|INNER tegument protein|Equine herpesvirus 1 (strain V592)

Query: 1 FNVEMWSTSN 10
FNV+ W++ N
Sbjct: 965 FNVDSWNSVN 974


>sp|ITP_EHV1B|INNER tegument protein|Equine herpesvirus 1 (strain Ab4p)

Query: 1 FNVEMWSTSN 10
FNV+ W++ N
Sbjct: 965 FNVDSWNSVN 974


>sp|REN_CALCV|REPLICATION enhancer protein|Cabbage leaf curl virus (isolate

Query: 1 FNVEMWSTS 9
FN ++W+TS
Sbjct: 66 FNFQVWTTS 74


>sp|P3_PBCV1|MINOR capsid protein 3|Paramecium bursaria Chlorella virus 1

Query: 2 NVEMWSTS 9
N E+W TS
Sbjct: 89 NTELWGTS 96


>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P

Query: 3 VEMWSTSN 10
+++WSTS+
Sbjct: 229 IDIWSTSS 236


>sp|ENV_SIVG1|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.grivet

Query: 2 NVEMWSTSN 10
N MW+T+N
Sbjct: 46 NTNMWATTN 54




35|SequenceR|180|171|KRNKAFNVEM

>sp|RDRP_SCPMV|REPLICASE polyprotein P2AB|Southern cowpea mosaic virus (SCPMV)

Query: 1 KRNKAF 6
KRNKAF
Sbjct: 840 KRNKAF 845


>sp|VP03_ALHV1|PROBABLE tegument protein antigen 3|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 RNKAFNVE 9
R K FNVE
Sbjct: 120 REKVFNVE 127




36|SequenceR|185|176|TQNKDKRNKA

>sp|VSR_HELVS|RNA silencing suppressor|Helenium virus S (HelVS)

Query: 5 DKRNKA 10
DKRNKA
Sbjct: 2 DKRNKA 7


>sp|VIF_FIVT2|VIRION infectivity factor|Feline immunodeficiency virus (isolate TM2)

Query: 2 QNKDKRN 8
QNK KRN
Sbjct: 238 QNKPKRN 244


>sp|NCAP_RYSV|NUCLEOPROTEIN yellow stunt virus (RYSV)

Query: 2 QNKDKRNK 9
Q +DKRNK
Sbjct: 437 QGRDKRNK 444




37|SequenceR|190|181|GTLNYTQNKD

>sp|5051R_ASFK5|PROTEIN MGF 505-1R|African swine fever virus (isolate

Query: 2 TLNYTQNKD 10
TL Y NKD
Sbjct: 252 TLKYDHNKD 260




38|SequenceR|195|186|TFPQLGTLNY

>sp|REL_AVIRE|TRANSFORMING protein rel polyprotein|Avian reticuloendotheliosis virus

Query: 1 TFPQLGTLNY 10
TFP + LNY
Sbjct: 54 TFPSIQILNY 63


>sp|YOSQ_BPSPB|PUTATIVE HNH homing endonuclease yosQ|Bacillus phage SPbeta (Bacillus

Query: 1 TFPQLGTLNY 10
T P+ GT NY
Sbjct: 43 THPKKGTQNY 52


>sp|VP4_LDCPR|OUTER capsid protein VP4|Lymantria dispar cypovirus 1 (isolate

Query: 1 TFPQLGT 7
T PQLGT
Sbjct: 30 TVPQLGT 36


>sp|GFAT_MIMIV|PROBABLE glutamine--fructose-6-phosphate aminotransferase

Query: 2 FPQLGTLNY 10
FP+ T+N+
Sbjct: 283 FPEFNTINF 291


>sp|OE56_NPVOP|OCCLUSION-DERIVED virus envelope protein E56|Orgyia pseudotsugata multicapsid

Query: 3 PQLGTLN 9
PQ+G+LN
Sbjct: 91 PQIGSLN 97


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 2 FPQLGTLN 9
FP +GT+N
Sbjct: 6130 FPLMGTIN 6137


>sp|OE56_NPVCF|OCCLUSION-DERIVED virus envelope protein E56|Choristoneura fumiferana nuclear

Query: 3 PQLGTLN 9
PQ+G+LN
Sbjct: 92 PQIGSLN 98




39|SequenceR|200|191|AIVYETFPQL

>sp|PEBS_BPPRM|PHYCOERYTHROBILIN synthase|Prochlorococcus phage P-SSM2

Query: 3 VYETFPQL 10
++ETFPQL
Sbjct: 31 LFETFPQL 38


>sp|RNC_IIV3|PUTATIVE ribonuclease 3|Invertebrate iridescent virus 3 (IIV-3)

Query: 4 YETFPQL 10
YE FPQL
Sbjct: 135 YEKFPQL 141




40|SequenceR|205|196|VACRLAIVYE

>sp|VP2_ROTW3|INNER capsid protein VP2|Rotavirus A (strain RVA/Cow/United

Query: 1 VACRLAIV 8
VAC+LAIV
Sbjct: 425 VACQLAIV 432


>sp|VP2_ROTRF|INNER capsid protein VP2|Rotavirus A (strain

Query: 1 VACRLAIV 8
VAC+LAIV
Sbjct: 425 VACQLAIV 432


>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain

Query: 1 VACRLAIV 8
VAC+LAIV
Sbjct: 424 VACQLAIV 431


>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain

Query: 1 VACRLAIV 8
VAC+LAIV
Sbjct: 424 VACQLAIV 431


>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 1 VACRLAIV 8
VAC+LAIV
Sbjct: 424 VACQLAIV 431


>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United

Query: 1 VACRLAIV 8
VAC+LAIV
Sbjct: 425 VACQLAIV 432


>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain

Query: 1 VACRLAIV 8
VAC+LAIV
Sbjct: 425 VACQLAIV 432


>sp|VP2_ROTBU|INNER capsid protein VP2|Rotavirus A (strain RVA/Cow/United

Query: 1 VACRLAIV 8
VAC+LAIV
Sbjct: 425 VACQLAIV 432


>sp|VP2_ROTBN|INNER capsid protein VP2|Rotavirus A (strain RVA/Cow/United

Query: 1 VACRLAIV 8
VAC+LAIV
Sbjct: 425 VACQLAIV 432


>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate

Query: 1 VACRLAIV 8
VAC+LAIV
Sbjct: 425 VACQLAIV 432


>sp|VP2_ROTTU|INNER capsid protein VP2|Rotavirus A (isolate RVA/Monkey/United

Query: 1 VACRLAIV 8
VAC+LAI+
Sbjct: 432 VACQLAII 439


>sp|VP2_ROTSR|INNER capsid protein VP2|Rotavirus A (strain RVA/SA11-Ramig/G3P[X])

Query: 1 VACRLAIV 8
VAC+LAI+
Sbjct: 427 VACQLAII 434


>sp|VP2_ROTSH|INNER capsid protein VP2|Rotavirus A (isolate RVA/Monkey/South

Query: 1 VACRLAIV 8
VAC+LAI+
Sbjct: 427 VACQLAII 434


>sp|VP2_ROTS1|INNER capsid protein VP2|Rotavirus A (strain RVA/SA11-Both/G3P5B[2])

Query: 1 VACRLAIV 8
VAC+LAI+
Sbjct: 426 VACQLAII 433


>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain

Query: 1 VACRLAIV 8
VAC+LAI+
Sbjct: 432 VACQLAII 439


>sp|Y006_OSHVF|UNCHARACTERIZED protein ORF6|Ostreid herpesvirus 1 (isolate France)

Query: 1 VACRLAIVYE 10
V C L+I+YE
Sbjct: 420 VICDLSILYE 429


>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain

Query: 1 VACRLAIV 8
VAC LAI+
Sbjct: 435 VACELAII 442


>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United

Query: 1 VACRLAIV 8
VAC LAI+
Sbjct: 435 VACELAII 442


>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 1 VACRLAIV 8
VAC LAI+
Sbjct: 435 VACELAII 442


>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 1 VACRLAIV 8
VAC LAI+
Sbjct: 435 VACELAII 442


>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 1 VACRLAIV 8
VAC LAI+
Sbjct: 441 VACELAII 448


>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain

Query: 1 VACRLAIV 8
VAC LAI+
Sbjct: 437 VACELAII 444


>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 1 VACRLAIV 8
VAC LAI+
Sbjct: 435 VACELAII 442


>sp|Y114_OSHVF|UNCHARACTERIZED protein ORF114|Ostreid herpesvirus 1 (isolate France)

Query: 1 VACRLAIVYE 10
V C L+I+YE
Sbjct: 238 VICDLSILYE 247


>sp|50511_ASFP4|PROTEIN MGF 505-11L|African swine fever virus (isolate

Query: 1 VACRLAIVY 9
VAC L I+Y
Sbjct: 216 VACDLPIIY 224


>sp|50511_ASFWA|PROTEIN MGF 505-11L|African swine fever virus (isolate

Query: 1 VACRLAIVY 9
VAC L I+Y
Sbjct: 216 VACDLPIIY 224


>sp|50511_ASFB7|PROTEIN MGF 505-11L|African swine fever virus (strain

Query: 1 VACRLAIVY 9
VAC L I+Y
Sbjct: 216 VACDLPIIY 224




41|SequenceR|210|201|FKSEKVACRL

>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)

Query: 1 FKSEKVACRL 10
+KS K ACRL
Sbjct: 235 YKSLKGACRL 244


>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)

Query: 1 FKSEKVACRL 10
+KS K ACRL
Sbjct: 235 YKSLKGACRL 244


>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 1 FKSEKVACRL 10
+KS K ACRL
Sbjct: 235 YKSLKGACRL 244


>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)

Query: 1 FKSEKVACRL 10
+KS K ACRL
Sbjct: 235 YKSLKGACRL 244


>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a

Query: 1 FKSEKVAC 8
FKS K AC
Sbjct: 220 FKSSKTAC 227


>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27

Query: 1 FKSEKVAC 8
FKS K AC
Sbjct: 220 FKSSKTAC 227


>sp|FUS_NPVOP|MAJOR envelope glycoprotein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 2 KSEKVACRL 10
++EKVAC L
Sbjct: 219 RTEKVACLL 227


>sp|VE1_BPV4|REPLICATION protein E1|Bos taurus papillomavirus 4 (Bovine

Query: 1 FKSEKVACR 9
FK++K CR
Sbjct: 185 FKNDKTCCR 193


>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b

Query: 1 FKSEKVACR 9
FKS K C+
Sbjct: 186 FKSHKTCCK 194


>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5

Query: 1 FKSEKVACR 9
FKS K C+
Sbjct: 186 FKSHKTCCK 194


>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15

Query: 1 FKSEKVACR 9
+KS K CR
Sbjct: 182 YKSSKTCCR 190


>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17

Query: 1 FKSEKVACR 9
+KS K CR
Sbjct: 189 YKSSKTCCR 197


>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23

Query: 1 FKSEKVACR 9
FKS K C+
Sbjct: 187 FKSNKTCCK 195




42|SequenceR|215|206|SWDSWFKSEK

>sp|CAPSD_DSDNV|CAPSID protein VP1|Diatraea saccharalis densovirus (DsDNV)

Query: 1 SWDSWFKSEK 10
SW W K K
Sbjct: 289 SWSDWIKENK 298


>sp|VGH_BPPHK|MINOR spike protein|Enterobacteria phage phiK (Bacteriophage phi-K)

Query: 2 WDSWFKSEK 10
WDS+FK K
Sbjct: 314 WDSFFKDGK 322


>sp|LT_POVMK|LARGE T antigen|Murine polyomavirus (strain Kilham) (MPyV)

Query: 2 WDSWFK 7
WD W+K
Sbjct: 90 WDEWWK 95


>sp|KITH_PSHV1|THYMIDINE kinase|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 SWDSWF 6
+W SWF
Sbjct: 43 AWRSWF 48


>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 WDSWFKSE 9
W+ ++KSE
Sbjct: 341 WNQYYKSE 348


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 4 SWFKSEK 10
SWFK E+
Sbjct: 1218 SWFKQEE 1224


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 3 DSWFKSE 9
D WFK++
Sbjct: 1238 DQWFKNQ 1244


>sp|SPIKE_CVBV|SPIKE glycoprotein|Bovine coronavirus (strain vaccine) (BCoV)

Query: 3 DSWFKSE 9
D WFK++
Sbjct: 1248 DQWFKNQ 1254


>sp|SPIKE_CVBQ|SPIKE glycoprotein|Bovine coronavirus (strain Quebec) (BCoV)

Query: 3 DSWFKSE 9
D WFK++
Sbjct: 1248 DQWFKNQ 1254


>sp|SPIKE_CVBOK|SPIKE glycoprotein|Bovine coronavirus (strain OK-0514) (BCoV)

Query: 3 DSWFKSE 9
D WFK++
Sbjct: 1248 DQWFKNQ 1254


>sp|SPIKE_CVBM|SPIKE glycoprotein|Bovine coronavirus (strain Mebus) (BCoV)

Query: 3 DSWFKSE 9
D WFK++
Sbjct: 1248 DQWFKNQ 1254


>sp|SPIKE_CVBLY|SPIKE glycoprotein|Bovine coronavirus (strain LY-138) (BCoV)

Query: 3 DSWFKSE 9
D WFK++
Sbjct: 1248 DQWFKNQ 1254


>sp|SPIKE_CVBLU|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 3 DSWFKSE 9
D WFK++
Sbjct: 1248 DQWFKNQ 1254


>sp|SPIKE_CVBLS|SPIKE glycoprotein|Bovine coronavirus (strain LSU-94LSS-051) (BCoV-LSU)

Query: 3 DSWFKSE 9
D WFK++
Sbjct: 1248 DQWFKNQ 1254


>sp|SPIKE_CVBL9|SPIKE glycoprotein|Bovine coronavirus (strain L9) (BCoV)

Query: 3 DSWFKSE 9
D WFK++
Sbjct: 1248 DQWFKNQ 1254


>sp|SPIKE_CVBF|SPIKE glycoprotein|Bovine coronavirus (strain F15) (BCoV)

Query: 3 DSWFKSE 9
D WFK++
Sbjct: 1248 DQWFKNQ 1254


>sp|SPIKE_CVBEN|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 3 DSWFKSE 9
D WFK++
Sbjct: 1248 DQWFKNQ 1254


>sp|SPIKE_CVMJH|SPIKE glycoprotein|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 3 DSWFKSE 9
D WFK++
Sbjct: 1115 DKWFKNQ 1121


>sp|SPIKE_CVMJC|SPIKE glycoprotein|Murine coronavirus (strain JHMV /

Query: 3 DSWFKSE 9
D WFK++
Sbjct: 1256 DKWFKNQ 1262


>sp|SPIKE_CVMA5|SPIKE glycoprotein|Murine coronavirus (strain A59) (MHV-A59)

Query: 3 DSWFKSE 9
D WFK++
Sbjct: 1204 DKWFKNQ 1210


>sp|SPIKE_CVM4|SPIKE glycoprotein|Murine coronavirus (strain 4) (MHV-4)

Query: 3 DSWFKSE 9
D WFK++
Sbjct: 1256 DKWFKNQ 1262


>sp|NS5_LDCPR|NON-STRUCTURAL protein 5|Lymantria dispar cypovirus 1 (isolate

Query: 2 WDSWFKS 8
+DSW+K+
Sbjct: 270 FDSWYKT 276


>sp|GC_GAHVM|ENVELOPE glycoprotein C homolog|Gallid herpesvirus 2 (strain

Query: 2 WDSWFKSE 9
WD+W K++
Sbjct: 427 WDNWTKTK 434


>sp|GC_GAHVR|ENVELOPE glycoprotein C homolog|Gallid herpesvirus 2 (strain RB-1b)

Query: 2 WDSWFKSE 9
WD+W K++
Sbjct: 427 WDNWTKTK 434


>sp|GC_GAHVB|ENVELOPE glycoprotein C homolog|Gallid herpesvirus 2 (strain bc-1)

Query: 2 WDSWFKSE 9
WD+W K++
Sbjct: 427 WDNWTKTK 434


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1 SWDSWFKS 8
SW SW KS
Sbjct: 891 SWKSWGKS 898


>sp|SPIKE_CVRSD|SPIKE glycoprotein|Rat coronavirus (strain 681) (RCV-SDAV)

Query: 3 DSWFKSE 9
D WFK++
Sbjct: 1240 DKWFKNQ 1246


>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus

Query: 2 WDSWF 6
WD WF
Sbjct: 377 WDQWF 381


>sp|GC_GAHVG|ENVELOPE glycoprotein C homolog|Gallid herpesvirus 2 (strain GA)

Query: 2 WDSWFKSE 9
WD+W K++
Sbjct: 426 WDNWTKTK 433


>sp|POLG_TMEVB|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 4 SWFKSEK 10
SWFK E+
Sbjct: 1223 SWFKQEE 1229


>sp|POLG_TMEVD|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 4 SWFKSEK 10
SWFK E+
Sbjct: 1221 SWFKQEE 1227


>sp|POLG_TMEVG|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 4 SWFKSEK 10
SWFK E+
Sbjct: 1223 SWFKQEE 1229


>sp|CAPSD_JDNVP|CAPSID protein VP1|Junonia coenia densovirus (isolate pBRJ/1990)

Query: 1 SWDSWFKSEK 10
SW W + K
Sbjct: 289 SWHDWIEQNK 298


>sp|VGH_BPAL3|MINOR spike protein|Escherichia phage alpha3 (Bacteriophage alpha-3)

Query: 2 WDSWFKSEK 10
W+S+FK K
Sbjct: 312 WNSFFKDGK 320


>sp|RDRP_FHV|RNA-DIRECTED RNA polymerase|Flock house virus (FHV)

Query: 1 SWDSWF 6
SW WF
Sbjct: 236 SWKEWF 241


>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 SWDSWFKSE 9
SW++W K++
Sbjct: 889 SWETWRKAK 897


>sp|MVP_SBWMN|MOVEMENT protein|Soil-borne wheat mosaic virus (strain

Query: 1 SWDSWFKSEK 10
+W +W K+ K
Sbjct: 62 AWTNWTKTNK 71


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 2 WDSWF 6
W SWF
Sbjct: 1085 WKSWF 1089


>sp|RDRP_BBV|RNA-DIRECTED RNA polymerase|Black beetle virus (BBV)

Query: 1 SWDSWF 6
SW WF
Sbjct: 236 SWKEWF 241


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 2 WDSWF 6
W SWF
Sbjct: 1085 WKSWF 1089


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 2 WDSWF 6
W SWF
Sbjct: 1085 WKSWF 1089




43|SequenceR|220|211|GMKEQSWDSW

>sp|DPOL_ADEB3|DNA polymerase|Bovine adenovirus B serotype 3

Query: 3 KEQSWDSW 10
K+Q W SW
Sbjct: 283 KKQKWSSW 290


>sp|DPOL_ADECC|DNA polymerase|Canine adenovirus serotype 1 (strain

Query: 5 QSWDSW 10
Q+WD+W
Sbjct: 271 QNWDTW 276


>sp|UL79_ALHV1|GENE 18 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 GMKEQSWDSW 10
G +E+ W +W
Sbjct: 246 GSRERQWHAW 255


>sp|Y06J_BPT4|UNCHARACTERIZED 12.8 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 MKEQSW 7
+KEQSW
Sbjct: 98 IKEQSW 103


>sp|DPOL_ADECT|DNA polymerase|Canine adenovirus serotype 2 (strain

Query: 4 EQSWDSW 10
EQ+W+ W
Sbjct: 271 EQNWEIW 277


>sp|RDRP_PMVK|RNA-DIRECTED RNA polymerase|Panicum mosaic virus (strain United

Query: 3 KEQSWDSW 10
+E SW SW
Sbjct: 198 RESSWFSW 205


>sp|VPR_SIVM1|PROTEIN Vpr|Simian immunodeficiency virus (isolate Mm142-83)

Query: 1 GMKEQSWDSW 10
G + + WD W
Sbjct: 10 GPQREPWDEW 19


>sp|VPR_SIVM2|PROTEIN Vpr|Simian immunodeficiency virus (isolate Mm251)

Query: 1 GMKEQSWDSW 10
G + + WD W
Sbjct: 10 GPQREPWDEW 19


>sp|VNS1_BTV10|NON-STRUCTURAL protein NS1|Bluetongue virus 10 (isolate USA)

Query: 4 EQSWDSW 10
++SW SW
Sbjct: 301 DESWQSW 307


>sp|VPR_SIVML|PROTEIN Vpr|Simian immunodeficiency virus (isolate K78)

Query: 1 GMKEQSWDSW 10
G + + WD W
Sbjct: 10 GPQREPWDEW 19




44|SequenceR|225|216|EEETMGMKEQ

>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 1 EEETMGMKEQ 10
+E+ MGM+E+
Sbjct: 404 DEKNMGMRER 413


>sp|GLYCO_IHNVR|GLYCOPROTEIN hematopoietic necrosis virus (strain

Query: 1 EEETMGMK 8
E++TMGM+
Sbjct: 284 EDKTMGMR 291


>sp|PG195_MONPV|PROTEIN OPG195|Monkeypox virus (MPXV)

Query: 1 EEETMGMK 8
EEET G+K
Sbjct: 26 EEETWGLK 33




45|SequenceR|230|221|LGCPAEEETM

>sp|VF309_IIV3|UNCHARACTERIZED protein 063R|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 GCPAEEE 8
GCPA+ E
Sbjct: 160 GCPAQPE 166


>sp|POL_SIVM2|GAG-POL polyprotein|Simian immunodeficiency virus (isolate Mm251)

Query: 2 GCPAEEET 9
GCP E E+
Sbjct: 1103 GCPTESES 1110


>sp|POL_SIVM1|GAG-POL polyprotein|Simian immunodeficiency virus (isolate Mm142-83)

Query: 2 GCPAEEET 9
GCP E E+
Sbjct: 1103 GCPTESES 1110


>sp|VL1_BPV6|MAJOR capsid protein L1|Bos taurus papillomavirus 6 (Bovine

Query: 3 CPAEEET 9
CP +EET
Sbjct: 65 CPGKEET 71




46|SequenceR|235|226|VRWLELGCPA

>sp|YR641_MIMIV|UNCHARACTERIZED protein R641|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 RWLELGC 8
RW+E+GC
Sbjct: 26 RWIEIGC 32


>sp|L_DMSVA|RNA-DIRECTED RNA polymerase L|Drosophila melanogaster sigma virus (isolate

Query: 1 VRWLELGC 8
+RWL+ GC
Sbjct: 54 IRWLQCGC 61


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 1 VRWLELGCPA 10
VRW G PA
Sbjct: 767 VRWCPTGTPA 776


>sp|L_TAMVU|RNA-DIRECTED RNA polymerase L|Tamiami mammarenavirus (isolate Rat/United States/W

Query: 3 WLELGCPA 10
W+E GC A
Sbjct: 2175 WIEFGCFA 2182


>sp|PSBD_BPSYW|PHOTOSYSTEM II D2 protein|Synechococcus phage S-WHM1

Query: 1 VRWLELG 7
VRWL+LG
Sbjct: 101 VRWLQLG 107


>sp|UL38_HCMVM|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 VRWLELGCP 9
+ WLE CP
Sbjct: 80 ISWLERHCP 88


>sp|UL38_HCMVA|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 VRWLELGCP 9
+ WLE CP
Sbjct: 80 ISWLERHCP 88


>sp|RDRP_CMVQ|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain Q)

Query: 5 ELGCPA 10
+LGCPA
Sbjct: 536 DLGCPA 541


>sp|R1A_LIYV9|REPLICASE polyprotein 1a|Lettuce infectious yellows virus (isolate

Query: 1 VRWLELGC 8
V W LGC
Sbjct: 1493 VSWYRLGC 1500


>sp|R1AB_LIYV9|REPLICASE polyprotein 1ab|Lettuce infectious yellows virus (isolate

Query: 1 VRWLELGC 8
V W LGC
Sbjct: 1493 VSWYRLGC 1500


>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse

Query: 3 WLELGCP 9
W + GCP
Sbjct: 193 WCKTGCP 199


>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United

Query: 3 WLELGCP 9
W + GCP
Sbjct: 193 WCKTGCP 199


>sp|EXO1_BPT5|PROBABLE exonuclease subunit 1|Escherichia phage T5 (Enterobacteria phage

Query: 1 VRWLELG 7
V W+ELG
Sbjct: 220 VEWIELG 226


>sp|VINT_BPPH8|INTEGRASE phage phi80 (Bacteriophage phi-80)

Query: 5 ELGCP 9
ELGCP
Sbjct: 350 ELGCP 354


>sp|POLG_TMEVG|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 1 VRWLELGCPA 10
+RW G PA
Sbjct: 791 LRWAPTGAPA 800


>sp|POLG_TMEVD|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 1 VRWLELGCPA 10
+RW G PA
Sbjct: 789 LRWAPTGAPA 798


>sp|POLG_TMEVB|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 1 VRWLELGCPA 10
+RW G PA
Sbjct: 791 LRWAPTGAPA 800


>sp|ENV_FIVT2|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (isolate TM2)

Query: 3 WLELGC 8
W+E GC
Sbjct: 440 WIEFGC 445


>sp|ENV_FIVSD|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain San

Query: 3 WLELGC 8
W+E GC
Sbjct: 440 WIEFGC 445


>sp|PSBD_BPSYP|PHOTOSYSTEM II D2 protein|Synechococcus phage S-PM2

Query: 1 VRWLELG 7
VRW +LG
Sbjct: 103 VRWFQLG 109


>sp|NCAP_DMSVA|NUCLEOPROTEIN melanogaster sigma virus (isolate

Query: 1 VRWLELGC 8
++WL GC
Sbjct: 253 IKWLFAGC 260


>sp|ENV_FIVU1|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain UT-113)

Query: 3 WLELGC 8
W+E GC
Sbjct: 440 WIEFGC 445


>sp|ENV_FIVPE|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (isolate Petaluma)

Query: 3 WLELGC 8
W+E GC
Sbjct: 440 WIEFGC 445


>sp|ENV_FIVU8|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain UK8)

Query: 3 WLELGC 8
W+E GC
Sbjct: 440 WIEFGC 445


>sp|ENV_FIVU2|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain UK2)

Query: 3 WLELGC 8
W+E GC
Sbjct: 440 WIEFGC 445


>sp|ENV_FIVWO|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (isolate Wo)

Query: 3 WLELGC 8
W+E GC
Sbjct: 438 WIEFGC 443




47|SequenceR|240|231|EAPKLVRWLE

>sp|3602L_ASFB7|PROTEIN MGF 360-2L|African swine fever virus (strain

Query: 3 PKLVRW 8
PK++RW
Sbjct: 352 PKIIRW 357


>sp|L_TIBVC|RNA-DIRECTED RNA polymerase L|Tibrogargan virus (strain CS132) (TIBV)

Query: 1 EAPKLVRWLE 10
E P L+ WL+
Sbjct: 1009 EEPALIAWLK 1018


>sp|RDRP_OUMVV|RNA-DEPENDENT RNA polymerase|Ourmia melon virus (isolate Melon/Iran/VE9)

Query: 1 EAPKLVRWL 9
EA ++VRWL
Sbjct: 16 EAKRIVRWL 24


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 4 KLVRWLE 10
K+V+WLE
Sbjct: 1555 KIVKWLE 1561


>sp|KR16_ICHVA|PROTEIN kinase ORF16|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 APKLVRWL 9
AP+L+RW+
Sbjct: 154 APRLLRWV 161


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 4 KLVRWLE 10
K+V+WLE
Sbjct: 1555 KIVKWLE 1561


>sp|KR14_ICHVA|PROTEIN kinase ORF14|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 APKLVRW 8
APKL+ W
Sbjct: 166 APKLIEW 172


>sp|GLYDT_BPPM6|GLYCINYLTRANSFERASE phage M6

Query: 3 PKLVRWL 9
P+L RWL
Sbjct: 42 PQLCRWL 48




48|SequenceR|245|236|RRGDAEAPKL

>sp|NP_ADEM1|PRE-HISTONE-LIKE nucleoprotein|Murine adenovirus A serotype 1

Query: 4 DAEAPKL 10
DAEAP+L
Sbjct: 58 DAEAPQL 64


>sp|SPAN1_BPP22|SPANIN, inner membrane subunit|Salmonella phage P22 (Bacteriophage P22)

Query: 3 GDAEAPKL 10
GD E+P+L
Sbjct: 103 GDGESPRL 110


>sp|SHUT_ADEGX|SHUTOFF protein|Fowl adenovirus C serotype 10

Query: 1 RRGDAEAP 8
RRGD E P
Sbjct: 25 RRGDGEFP 32




49|SequenceR|250|241|LLRVPRRGDA

>sp|VP7_AHSV9|CORE protein VP7|African horse sickness virus 9

Query: 2 LRVPRRGDA 10
L PRRGDA
Sbjct: 173 LLAPRRGDA 181


>sp|VP7_AHSV6|CORE protein VP7|African horse sickness virus 6

Query: 2 LRVPRRGDA 10
L PRRGDA
Sbjct: 173 LLAPRRGDA 181


>sp|VP7_AHSV|CORE protein VP7|African horse sickness virus (AHSV)

Query: 2 LRVPRRGDA 10
L PRRGDA
Sbjct: 173 LLAPRRGDA 181


>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 LLRVPRRGD 9
L +PRRGD
Sbjct: 60 LKNLPRRGD 68




50|SequenceR|255|246|RAKKWLLRVP

>sp|CP81_BP186|UNCHARACTERIZED exonuclease CP81|Escherichia phage 186 (Bacteriophage 186)

Query: 1 RAKKWL 6
RAKKWL
Sbjct: 11 RAKKWL 16


>sp|VP6_MYRV9|MICROTUBULE-ASSOCIATED protein VP6|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 4 KWLLRVP 10
KW L+VP
Sbjct: 535 KWFLKVP 541


>sp|1A_TAV|REPLICATION protein 1a|Tomato aspermy virus (TAV)

Query: 4 KWLLRVP 10
+WL RVP
Sbjct: 652 RWLYRVP 658


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 4 KWLLRV 9
KWLLR+
Sbjct: 1048 KWLLRI 1053


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 4 KWLLRV 9
KWLLR+
Sbjct: 1039 KWLLRI 1044


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 4 KWLLRV 9
KWLLR+
Sbjct: 1039 KWLLRI 1044


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 2 AKKWLLRV 9
A WLLRV
Sbjct: 2786 APSWLLRV 2793


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 2 AKKWLLRV 9
A WLLRV
Sbjct: 2793 APSWLLRV 2800


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 2 AKKWLLRV 9
A WLLRV
Sbjct: 2786 APSWLLRV 2793


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 2 AKKWLLRV 9
A WLLRV
Sbjct: 2793 APSWLLRV 2800


>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 1 RAKKWLLR 8
R ++WLLR
Sbjct: 645 RVQEWLLR 652


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 RAKKWLLRVP 10
R + W+LR P
Sbjct: 235 RVESWILRNP 244


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 RAKKWLLRVP 10
R + W+LR P
Sbjct: 235 RVESWILRNP 244


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 RAKKWLLRVP 10
R + W+LR P
Sbjct: 235 RVESWILRNP 244


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 RAKKWLLRVP 10
R + W+LR P
Sbjct: 235 RVESWILRNP 244


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 RAKKWLLRVP 10
R + W+LR P
Sbjct: 235 RVESWILRNP 244




51|SequenceR|260|251|LVPAGRAKKW

>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 2 VPAGRAKKW 10
VPA RA +W
Sbjct: 74 VPAFRATRW 82


>sp|Y020_HIS1I|UNCHARACTERIZED protein ORF20|His1 virus (isolate Australia/Victoria) (His1V)

Query: 1 LVPAGRAKKW 10
LVP+GR K++
Sbjct: 85 LVPSGRYKQY 94


>sp|DUT_ALHV1|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Alcelaphine herpesvirus 1

Query: 1 LVPAGRAK 8
+VPAGR K
Sbjct: 105 VVPAGRLK 112


>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)

Query: 3 PAGRAKKW 10
P GR+K W
Sbjct: 285 PRGRSKGW 292




52|SequenceR|265|256|GLTKELVPAG

>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus

Query: 1 GLTKELVPAG 10
GLT E VP G
Sbjct: 2320 GLTTEAVPVG 2329


>sp|POLA_CHPVE|POLYPROTEIN p69|Cryphonectria hypovirus 1 (strain EP713)

Query: 3 TKELVPAG 10
T+E+VPAG
Sbjct: 30 TEEVVPAG 37




53|SequenceR|270|261|YWINYGLTKE

>sp|EP153_ASFM2|LECTIN-LIKE protein EP153R|African swine fever virus (isolate

Query: 1 YWINYGLTKE 10
YW+NY L K
Sbjct: 127 YWVNYSLIKN 136


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1 YWINYG 6
YWI YG
Sbjct: 4359 YWIGYG 4364


>sp|GLYCO_PIRYV|GLYCOPROTEIN virus (PIRYV)

Query: 2 WINYGLTKE 10
WI+YG KE
Sbjct: 354 WIDYGEMKE 362


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 YWINYG 6
YWI YG
Sbjct: 4359 YWIGYG 4364


>sp|VF184_IIV6|PUTATIVE helicase 184R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 YWINYGLTKE 10
YW+ YG +KE
Sbjct: 203 YWLMYGSSKE 212


>sp|VP4_ROTEL|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Equine/United

Query: 4 NYGLTKE 10
NYG+TKE
Sbjct: 733 NYGITKE 739


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 2 WINYGLTK 9
W +YG+TK
Sbjct: 610 WDDYGMTK 617


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 2 WINYGLTK 9
W +YG+TK
Sbjct: 609 WDDYGMTK 616


>sp|RPOL_BPK11|DNA-DIRECTED RNA polymerase|Enterobacteria phage K11 (Bacteriophage K11)

Query: 2 WINYGLTKE 10
W+ YG+T++
Sbjct: 643 WLQYGVTRK 651


>sp|RDRP_MCMVK|RNA-DIRECTED RNA polymerase|Maize chlorotic mottle virus (isolate

Query: 1 YWINYGL 7
+W+NYG
Sbjct: 785 HWLNYGF 791


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 YWINYG 6
YW+ YG
Sbjct: 4409 YWVGYG 4414


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 YWINYG 6
YW+ YG
Sbjct: 4402 YWVGYG 4407


>sp|VP4_ROTB4|OUTER capsid protein VP4|Rotavirus A (strain RVA/Cow/United

Query: 4 NYGLTKE 10
NYG+T+E
Sbjct: 733 NYGITRE 739


>sp|P10_PBCV1|MINOR capsid protein P10|Paramecium bursaria Chlorella virus 1

Query: 3 INYGLT 8
INYGLT
Sbjct: 282 INYGLT 287


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 YWINYG 6
YW+ YG
Sbjct: 4409 YWVGYG 4414


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 YWINYG 6
YW+ YG
Sbjct: 4402 YWVGYG 4407


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 2 WINYGLTKE 10
++NYGL K+
Sbjct: 193 YVNYGLCKQ 201


>sp|VP4_ROTBV|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Cow/United

Query: 4 NYGLTKE 10
NYG+T+E
Sbjct: 733 NYGITRE 739


>sp|VP4_ROTBU|OUTER capsid protein VP4|Rotavirus A (strain RVA/Cow/United

Query: 4 NYGLTKE 10
NYG+T+E
Sbjct: 733 NYGITRE 739


>sp|EP153_ASFWA|LECTIN-LIKE protein EP153R|African swine fever virus (isolate

Query: 1 YWINYGLT 8
YW+NY L
Sbjct: 126 YWVNYSLN 133


>sp|EP153_ASFP4|LECTIN-LIKE protein EP153R|African swine fever virus (isolate

Query: 1 YWINYGL 7
YW+NY L
Sbjct: 121 YWVNYSL 127


>sp|VP4_ROTB6|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4 NYGLTKE 10
NYG+T+E
Sbjct: 733 NYGITRE 739


>sp|VP4_ROTW3|OUTER capsid protein VP4|Rotavirus A (strain RVA/Cow/United

Query: 4 NYGLTKE 10
NYG+T+E
Sbjct: 733 NYGITRE 739


>sp|VP4_ROTME|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4 NYGLTKE 10
NYG+T+E
Sbjct: 733 NYGITRE 739


>sp|VP4_ROT46|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4 NYGLTKE 10
NYG+TK+
Sbjct: 735 NYGITKQ 741


>sp|VP4_ROTBK|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4 NYGLTKE 10
NYG+T+E
Sbjct: 729 NYGITRE 735


>sp|TRM3_PSHV1|TRIPARTITE terminase subunit 3|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 WINYGLT 8
W+ YGL+
Sbjct: 9 WLKYGLS 15


>sp|VP4_ROTMB|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Mouse/United

Query: 4 NYGLTKE 10
NYG++KE
Sbjct: 732 NYGISKE 738


>sp|VP4_ROTE1|OUTER capsid protein VP4|Rotavirus A (strain RVA/Equine/United

Query: 4 NYGLTKE 10
NYG+T+E
Sbjct: 733 NYGITRE 739


>sp|VP4_ROTEO|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4 NYGLTKE 10
NYG+T+E
Sbjct: 733 NYGITRE 739


>sp|RPOL_BPT3|DNA-DIRECTED RNA polymerase|Enterobacteria phage T3 (Bacteriophage T3)

Query: 2 WINYGLTK 9
W+ YG+T+
Sbjct: 621 WLAYGVTR 628


>sp|VP4_ROTEH|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Equine/United

Query: 4 NYGLTKE 10
NYG+T+E
Sbjct: 733 NYGITRE 739


>sp|RPOL_BPT7|T7 RNA polymerase|Escherichia phage T7 (Bacteriophage T7)

Query: 2 WINYGLTK 9
W+ YG+T+
Sbjct: 620 WLAYGVTR 627


>sp|VP4_ROTBB|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Cow/United

Query: 4 NYGLTKE 10
NYG+T+E
Sbjct: 729 NYGITRE 735


>sp|VP4_ROTSS|OUTER capsid protein VP4|Rotavirus A (strain RVA/SA11-SEM/G3P5B[2])

Query: 4 NYGLTKE 10
NYG+TK+
Sbjct: 733 NYGITKQ 739


>sp|NCAP_WCBV|NUCLEOPROTEIN Caucasian bat virus (WCBV)

Query: 2 WINYGL 7
WI+YG+
Sbjct: 89 WISYGI 94


>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)

Query: 2 WINYGL 7
WI+YG+
Sbjct: 89 WISYGI 94


>sp|VP4_ROTSH|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Monkey/South

Query: 4 NYGLTKE 10
NYG+TK+
Sbjct: 733 NYGITKQ 739


>sp|VP4_ROTS1|OUTER capsid protein VP4|Rotavirus A (strain RVA/SA11-Both/G3P5B[2])

Query: 4 NYGLTKE 10
NYG+TK+
Sbjct: 733 NYGITKQ 739


>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4 NYGLTKE 10
NYG+T+E
Sbjct: 729 NYGITRE 735


>sp|VP4_ROTBA|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4 NYGLTKE 10
NYG+T+E
Sbjct: 729 NYGITRE 735


>sp|LAP_YLDV|E3 ubiquitin-protein ligase LAP|Yaba-like disease virus (YLDV)

Query: 2 WINYGLTKE 10
WINY KE
Sbjct: 36 WINYSKKKE 44


>sp|RDRP_POLVP|RNA-DIRECTED RNA polymerase|Pothos latent virus (isolate Pigeonpea/India)

Query: 1 YWINYGLTKE 10
+W+ +G+T +
Sbjct: 696 FWLAFGITPD 705


>sp|VP4_ROTB9|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4 NYGLTKE 10
N+G+TKE
Sbjct: 727 NFGITKE 733


>sp|VP4_ROTF1|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4 NYGLTKE 10
NYG+TK+
Sbjct: 732 NYGITKK 738


>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain

Query: 4 NYGLTKE 10
NYG+TK+
Sbjct: 732 NYGITKK 738


>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain

Query: 4 NYGLTKE 10
NYG+TK+
Sbjct: 732 NYGITKK 738


>sp|VP3_ROTBS|PROTEIN VP3|Rotavirus C (isolate RVC/Cow/Japan/Shintoku/1991/G2P[3]) (RV-C)

Query: 1 YWINYG 6
YWINY
Sbjct: 236 YWINYS 241




54|SequenceR|275|266|NSEPYYWINY

>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)

Query: 1 NSEPYYWI 8
NS+P++W+
Sbjct: 764 NSQPFFWV 771


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 1 NSEPYYWI 8
NS+P++W+
Sbjct: 764 NSQPFFWV 771


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 1 NSEPYYWI 8
NS+P++W+
Sbjct: 764 NSQPFFWV 771


>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)

Query: 2 SEPYYW 7
S+P+YW
Sbjct: 615 SDPFYW 620


>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann

Query: 2 SEPYYW 7
S+P+YW
Sbjct: 622 SDPFYW 627


>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)

Query: 2 SEPYYW 7
S+P+YW
Sbjct: 615 SDPFYW 620


>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)

Query: 2 SEPYYW 7
S+P+YW
Sbjct: 609 SDPFYW 614


>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)

Query: 2 SEPYYW 7
S+P+YW
Sbjct: 621 SDPFYW 626


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 PYYWINY 10
PY+W+ Y
Sbjct: 838 PYHWMGY 844


>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)

Query: 2 SEPYYW 7
S+P+YW
Sbjct: 609 SDPFYW 614


>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 2 SEPYYW 7
S+P+YW
Sbjct: 622 SDPFYW 627


>sp|UL128_HCMVA|UNCHARACTERIZED protein UL128|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 SEPYYWIN 9
S PY WIN
Sbjct: 127 SVPYRWIN 134


>sp|CAPSD_HV19S|MAJOR capsid protein|Helminthosporium victoriae virus-190S (Hv190SV)

Query: 4 PYYWI 8
PY+WI
Sbjct: 414 PYFWI 418


>sp|POL1_TOTV|RNA1 polyprotein|Tomato torrado virus (isolate Solanum

Query: 3 EPYYWI 8
EP YWI
Sbjct: 1573 EPMYWI 1578


>sp|UL128_HCMVM|ENVELOPE protein UL128|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 SEPYYWIN 9
S PY WIN
Sbjct: 127 SVPYRWIN 134


>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)

Query: 2 SEPYYW 7
SEP YW
Sbjct: 141 SEPAYW 146


>sp|MT_POVHA|MIDDLE T antigen|Hamster polyomavirus (HaPyV) (Mesocricetus auratus

Query: 3 EPYYWINY 10
EP YW +Y
Sbjct: 20 EPQYWGDY 27


>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 SEPYYWIN 9
SEP YW +
Sbjct: 128 SEPCYWFS 135


>sp|POL_CSVMV|PUTATIVE enzymatic polyprotein|Cassava vein mosaic virus (CsVMV)

Query: 1 NSEPYYWIN 9
NS+ YYWI
Sbjct: 586 NSQVYYWIK 594


>sp|EP153_ASFM2|LECTIN-LIKE protein EP153R|African swine fever virus (isolate

Query: 1 NSEPYYWINY 10
N E YW+NY
Sbjct: 122 NHESNYWVNY 131


>sp|LT_POVHA|LARGE T antigen|Hamster polyomavirus (HaPyV) (Mesocricetus auratus

Query: 3 EPYYWINY 10
EP YW +Y
Sbjct: 20 EPQYWGDY 27


>sp|NCAP_BCHK5|NUCLEOPROTEIN coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 NSEPYYWINY 10
N EP Y+++Y
Sbjct: 321 NGEPVYFLSY 330


>sp|ST_POVHA|SMALL t antigen|Hamster polyomavirus (HaPyV) (Mesocricetus auratus

Query: 3 EPYYWINY 10
EP YW +Y
Sbjct: 20 EPQYWGDY 27


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 PYYWINY 10
PY W+ Y
Sbjct: 837 PYQWMGY 843


>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 PYYWINY 10
PY W+ Y
Sbjct: 836 PYQWMGY 842


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 PYYWINY 10
PY W+ Y
Sbjct: 837 PYKWMGY 843


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 PYYWINY 10
PY W+ Y
Sbjct: 837 PYRWMGY 843


>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 PYYWINY 10
PY W+ Y
Sbjct: 835 PYRWMGY 841


>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)

Query: 1 NSEPYYW 7
S+P+YW
Sbjct: 608 QSDPFYW 614


>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)

Query: 1 NSEPYYW 7
S+P+YW
Sbjct: 608 QSDPFYW 614


>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great

Query: 1 NSEPYYW 7
S+P+YW
Sbjct: 608 QSDPFYW 614


>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)

Query: 1 NSEPYYW 7
S+P+YW
Sbjct: 608 QSDPFYW 614


>sp|POL_EIAVC|POL polyprotein|Equine infectious anemia virus (isolate

Query: 4 PYYWINY 10
PY W+ Y
Sbjct: 411 PYSWLGY 417


>sp|POL_EIAV9|POL polyprotein|Equine infectious anemia virus (isolate

Query: 4 PYYWINY 10
PY W+ Y
Sbjct: 411 PYSWLGY 417


>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)

Query: 1 NSEPYYW 7
S+P+YW
Sbjct: 607 QSDPFYW 613


>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)

Query: 1 NSEPYYW 7
S+P+YW
Sbjct: 607 QSDPFYW 613


>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)

Query: 1 NSEPYYW 7
S+P+YW
Sbjct: 607 QSDPFYW 613


>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)

Query: 1 NSEPYYW 7
S+P+YW
Sbjct: 608 QSDPFYW 614


>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)

Query: 1 NSEPYYW 7
S+P+YW
Sbjct: 607 QSDPFYW 613


>sp|POL_EIAVY|POL polyprotein|Equine infectious anemia virus (strain

Query: 4 PYYWINY 10
PY W+ Y
Sbjct: 410 PYSWLGY 416


>sp|RABL_MIMIV|PROBABLE Rab-related GTPase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 EPYYWIN 9
+ YYWIN
Sbjct: 104 DVYYWIN 110


>sp|POL_SIVGB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate GB1)

Query: 4 PYYWINY 10
P++W+ Y
Sbjct: 822 PFHWMGY 828




55|SequenceR|280|271|ETLNTNSEPY

>sp|Y013_NPVOP|UNCHARACTERIZED 36.6 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 ETLNTNSEPY 10
+TLNTNS+ +
Sbjct: 161 KTLNTNSDKF 170


>sp|YR748_MIMIV|PUTATIVE ankyrin repeat protein R748|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 NTNSEPY 10
N NSEPY
Sbjct: 167 NKNSEPY 173


>sp|HFT_BPCA1|HEAD fiber trimeric protein|Bacteroides phage crAss001 (Bacteroides

Query: 1 ETLNTNSEPY 10
ET+ SEPY
Sbjct: 35 ETIGGESEPY 44


>sp|VP09_BPAPS|PUTATIVE protein p9|Acyrthosiphon pisum secondary endosymbiont phage

Query: 3 LNTNSEP 9
LNTN EP
Sbjct: 353 LNTNKEP 359




56|SequenceR|285|276|TTNMTETLNT

>sp|YR825_MIMIV|PUTATIVE ankyrin repeat protein R825|Acanthamoeba polyphaga mimivirus

Query: 1 TTNMTETLNT 10
TTNM++ +NT
Sbjct: 12 TTNMSDIINT 21




57|SequenceR|290|281|ELQQNTTNMT

***** No hits found ******


58|SequenceR|295|286|GGLHLELQQN

>sp|MCP_SUHVS|MAJOR capsid protein|Suid herpesvirus 1 (strain Indiana

Query: 1 GGLHLELQQ 9
GGLHL+L Q
Sbjct: 1056 GGLHLQLTQ 1064


>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate

Query: 1 GGLHLELQQN 10
GG+H+ Q+N
Sbjct: 73 GGIHIPQQEN 82


>sp|UDPE_NPVCD|ECDYSTEROID UDP-glucosyltransferase|Choristoneura fumiferana defective

Query: 1 GGLHLELQ 8
GGLHL L+
Sbjct: 265 GGLHLTLE 272


>sp|NSP1B_ROTGI|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate RVB/Rat/United

Query: 1 GGLHLELQQN 10
GG+H+ Q N
Sbjct: 73 GGIHIPYQHN 82


>sp|POL1_BRAV|RNA1 polyprotein|Blackcurrant reversion association virus (BRAV)

Query: 1 GGLHLELQQN 10
G +H+ LQ N
Sbjct: 1851 GSIHIALQNN 1860


>sp|TMP_BPSPB|PROBABLE tape measure protein|Bacillus phage SPbeta (Bacillus phage

Query: 3 LHLELQQN 10
LHL+++QN
Sbjct: 1661 LHLQIEQN 1668


>sp|VG15_BPMD2|GENE 15 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 GGLHLELQ 8
GGLHL+ +
Sbjct: 164 GGLHLDTE 171




59|SequenceR|300|291|VWFSEGGLHL

>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 WFSEGGLHL 10
W++EG L++
Sbjct: 167 WYAEGALYM 175


>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 WFSEGGLHL 10
W++EG L++
Sbjct: 167 WYAEGALYM 175


>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 WFSEGGLHL 10
W++EG L++
Sbjct: 167 WYAEGALYM 175


>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 1 VWFSEGGLHL 10
+W+ +GG+ L
Sbjct: 655 IWYGDGGVEL 664


>sp|CAPSD_ANV1|CAPSID polyprotein VP90|Avian nephritis virus 1 (ANV-1)

Query: 2 WFSEGGLH 9
+ SEGG+H
Sbjct: 503 YLSEGGIH 510


>sp|289L_IIV6|PUTATIVE Bro-N domain-containing protein 289L|Invertebrate iridescent virus

Query: 1 VWFSEGGLH 9
V+ SEGGL+
Sbjct: 96 VYISEGGLY 104


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 2 WFSEGGL 8
WF GGL
Sbjct: 122 WFDAGGL 128


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 2 WFSEGGL 8
WF GGL
Sbjct: 121 WFDAGGL 127


>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P

Query: 1 VWFSEGGLHL 10
VW +E LH+
Sbjct: 326 VWHAEQALHI 335


>sp|S1_BPMU|TAIL fiber protein S|Escherichia phage Mu (Bacteriophage Mu)

Query: 2 WFSEG 6
WFSEG
Sbjct: 26 WFSEG 30


>sp|CEP2_SHV21|CYTOPLASMIC envelopment protein 2|Saimiriine herpesvirus 2 (strain 11)

Query: 2 WFSEGGL 8
W+SEG +
Sbjct: 161 WYSEGAI 167




60|SequenceR|305|296|YSIMSVWFSE

>sp|HEMA_VACCC|PROTEIN OPG185|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 YSIMSVWFSE 10
Y +MS W+ E
Sbjct: 42 YVVMSAWYKE 51


>sp|HEMA_MONPV|PROTEIN OPG185|Monkeypox virus (MPXV)

Query: 1 YSIMSVWFSE 10
Y +MS W+ E
Sbjct: 42 YVVMSAWYKE 51


>sp|HEMA_CWPXG|PROTEIN OPG185|Cowpox virus (strain GRI-90 /

Query: 1 YSIMSVWFSE 10
Y +MS W+ E
Sbjct: 42 YVVMSAWYKE 51


>sp|HEMA_VACCI|PROTEIN OPG185|Vaccinia virus (strain IHD-J) (VACV)

Query: 1 YSIMSVWFSE 10
Y +MS W+ E
Sbjct: 42 YVVMSAWYKE 51


>sp|HEMA_VACCW|PROTEIN OPG185|Vaccinia virus (strain Western Reserve)

Query: 1 YSIMSVWFSE 10
Y +MS W+ E
Sbjct: 42 YVVMSAWYKE 51


>sp|HEMA_VACCT|PROTEIN OPG185|Vaccinia virus (strain Tian Tan)

Query: 1 YSIMSVWFSE 10
Y +MS W+ E
Sbjct: 42 YVVMSAWYKE 51


>sp|HEMA_VACCA|PROTEIN OPG185|Vaccinia virus (strain Ankara) (VACV)

Query: 1 YSIMSVWFSE 10
Y +MS W+ E
Sbjct: 42 YVVMSAWYKE 51


>sp|HEMA_VAR67|PROTEIN OPG185|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 YSIMSVWFSE 10
Y +MS W+ E
Sbjct: 44 YVVMSAWYKE 53


>sp|YR104_MIMIV|PUTATIVE transposase R104|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 SIMSVWFSE 10
+I ++WF+E
Sbjct: 145 NIFNIWFNE 153


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 YSIMSVWF 8
YS+ +VWF
Sbjct: 2405 YSLYTVWF 2412


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1 YSIMSVWF 8
YS+ +VWF
Sbjct: 2375 YSLYTVWF 2382


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 YSIMSVWF 8
YS+ +VWF
Sbjct: 2355 YSLYTVWF 2362


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 1 YSIMSVWF 8
YS+ +VWF
Sbjct: 2405 YSLYTVWF 2412


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 1 YSIMSVWF 8
YS+ +VWF
Sbjct: 2375 YSLYTVWF 2382


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 1 YSIMSVWF 8
YS+ +VWF
Sbjct: 2355 YSLYTVWF 2362


>sp|VP2_BTV1A|OUTER capsid protein VP2|Bluetongue virus 1 (isolate Australia)

Query: 1 YSIMSVWF 8
YS+M +W+
Sbjct: 379 YSMMRLWY 386


>sp|ETF1_MSEPV|EARLY transcription factor 70 kDa|Melanoplus sanguinipes entomopoxvirus

Query: 2 SIMSVWFSE 10
SIM +W S+
Sbjct: 78 SIMDIWISK 86




61|SequenceR|310|301|KGLSNYSIMS

>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2 GLSNYSIMS 10
GLSNY+I S
Sbjct: 2155 GLSNYAIGS 2163


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2 GLSNYSIMS 10
GLSNY++ S
Sbjct: 2154 GLSNYAVGS 2162


>sp|REP_BPIF1|REPLICATION-ASSOCIATED protein G2P|Escherichia phage If1 (Bacteriophage If1)

Query: 2 GLSNYSIMS 10
GLS+YSI++
Sbjct: 198 GLSDYSILN 206


>sp|YL170_MIMIV|PUTATIVE FNIP repeat-containing protein L170|Acanthamoeba polyphaga

Query: 1 KGLSNYSIMS 10
KGL+NY ++
Sbjct: 429 KGLTNYKLIK 438




62|SequenceR|315|306|TAVPSKGLSN

>sp|POLG_TEV|GENOME polyprotein|Tobacco etch virus (TEV)

Query: 2 AVPSKGLSN 10
A+P+KGLS+
Sbjct: 1623 AIPNKGLSS 1631


>sp|UL33_RCMVM|G-PROTEIN coupled receptor homolog R33|Rat cytomegalovirus (strain

Query: 1 TAVPSKGLS 9
T VPS GLS
Sbjct: 22 TCVPSLGLS 30


>sp|ABL_MLVAB|TYROSINE-PROTEIN kinase transforming protein Abl|Abelson murine leukemia virus

Query: 1 TAVPSKGLSN 10
TA PS GLS+
Sbjct: 444 TASPSSGLSH 453




63|SequenceR|320|311|APIRLTAVPS

>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1 APIRLTAVPS 10
AP RLTA+ +
Sbjct: 598 APCRLTAIAA 607




64|SequenceR|325|316|SKEQIAPIRL

***** No hits found ******


65|SequenceR|330|321|EICQFSKEQI

>sp|Y192_ATV|UNCHARACTERIZED protein ORF192|Acidianus two-tailed virus (ATV)

Query: 2 ICQFSKEQI 10
+C F KEQ+
Sbjct: 12 LCNFIKEQL 20


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 1 EICQFSKEQ 9
EIC F K+Q
Sbjct: 914 EICLFKKQQ 922


>sp|IBMP_CSVMV|PUTATIVE transactivator/viroplasmin protein|Cassava vein mosaic virus

Query: 2 ICQFSKEQI 10
+C+ SK+QI
Sbjct: 319 LCELSKKQI 327




66|SequenceR|335|326|CAQMVEICQF

>sp|Y059_OSHVF|UNCHARACTERIZED protein ORF59|Ostreid herpesvirus 1 (isolate France)

Query: 1 CAQMVEICQF 10
CAQ++ C++
Sbjct: 558 CAQLINPCEY 567


>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7

Query: 1 CAQMVEICQF 10
CA VE+C+
Sbjct: 76 CADAVELCEL 85


>sp|POL1_RRVC|RNA1 polyprotein|Raspberry ringspot virus (strain cherry)

Query: 1 CAQMVEICQF 10
CA+ +E C+F
Sbjct: 1986 CARPLEQCEF 1995




67|SequenceR|340|331|QDEAVCAQMV

>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)

Query: 3 EAVCAQMV 10
EA+CA MV
Sbjct: 2706 EAICASMV 2713


>sp|POLG_PPVSK|GENOME polyprotein|Plum pox potyvirus (strain SK

Query: 3 EAVCAQMV 10
EA+CA MV
Sbjct: 2724 EAICASMV 2731


>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)

Query: 3 EAVCAQMV 10
EA+CA MV
Sbjct: 2724 EAICASMV 2731


>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)

Query: 3 EAVCAQMV 10
EA+CA MV
Sbjct: 2724 EAICASMV 2731


>sp|POLG_PPVEA|GENOME polyprotein|Plum pox potyvirus (strain El

Query: 3 EAVCAQMV 10
EA+CA MV
Sbjct: 1100 EAICASMV 1107


>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)

Query: 3 EAVCAQMV 10
EA+CA MV
Sbjct: 2725 EAICASMV 2732


>sp|POLG_OMV|GENOME polyprotein|Ornithogalum mosaic virus

Query: 3 EAVCAQMV 10
EAVCA M+
Sbjct: 798 EAVCAAMI 805


>sp|POLG_TVMV|GENOME polyprotein|Tobacco vein mottling virus (TVMV)

Query: 3 EAVCAQMV 10
EA+CA M+
Sbjct: 2674 EAICASMI 2681


>sp|POLG_TEV|GENOME polyprotein|Tobacco etch virus (TEV)

Query: 3 EAVCAQMV 10
EA+CA M+
Sbjct: 2707 EAICASMI 2714


>sp|POLG_SBMVG|GENOME polyprotein|Soybean mosaic virus (strain G2)

Query: 3 EAVCAQMV 10
EA+CA M+
Sbjct: 2716 EAICASMI 2723


>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)

Query: 3 EAVCAQMV 10
EA+CA M+
Sbjct: 2716 EAICASMI 2723


>sp|POLG_ZYMVS|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 3 EAVCAQMV 10
EA+CA M+
Sbjct: 2719 EAICAAMI 2726


>sp|POLG_ZYMVR|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 3 EAVCAQMV 10
EA+CA M+
Sbjct: 2719 EAICAAMI 2726


>sp|POLG_ZYMVC|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 3 EAVCAQMV 10
EA+CA M+
Sbjct: 2716 EAICAAMI 2723


>sp|POLG_WMV2U|GENOME polyprotein|Watermelon mosaic virus II (isolate

Query: 3 EAVCAQMV 10
EA+CA M+
Sbjct: 651 EAICAAMI 658


>sp|POLG_WMV2T|GENOME polyprotein|Watermelon mosaic virus II (isolate

Query: 3 EAVCAQMV 10
EA+CA M+
Sbjct: 89 EAICAAMI 96


>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)

Query: 3 EAVCAQMV 10
EA+CA M+
Sbjct: 2790 EAICAAMI 2797


>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)

Query: 3 EAVCAQMV 10
EA+CA M+
Sbjct: 2791 EAICAAMI 2798


>sp|POLG_PEMVC|GENOME polyprotein|Pepper mottle virus (isolate California)

Query: 3 EAVCAQMV 10
EA+CA M+
Sbjct: 2708 EAICAAMI 2715


>sp|POLG_LMVE|GENOME polyprotein|Lettuce mosaic virus (strain E)

Query: 3 EAVCAQMV 10
EA+CA M+
Sbjct: 2889 EAICAAMI 2896


>sp|POLG_LMV0|GENOME polyprotein|Lettuce mosaic virus (strain 0

Query: 3 EAVCAQMV 10
EA+CA M+
Sbjct: 2889 EAICAAMI 2896


>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus

Query: 3 EAVCAQMV 10
EA+CA M+
Sbjct: 2696 EAICAAMI 2703


>sp|POLG_BTMV|GENOME polyprotein|Beet mosaic virus (BtMV)

Query: 3 EAVCAQMV 10
EA+CA M+
Sbjct: 2725 EAICAAMI 2732


>sp|POLG_PVYN|GENOME polyprotein|Potato virus Y (strain N)

Query: 3 EAVCAQMV 10
EA+CA M+
Sbjct: 2709 EAICAAMI 2716


>sp|POLG_PVYHU|GENOME polyprotein|Potato virus Y (strain Hungarian)

Query: 3 EAVCAQMV 10
EA+CA M+
Sbjct: 2707 EAICAAMI 2714


>sp|POLG_PEMVM|GENOME polyprotein|Peanut mottle virus (strain M)

Query: 3 EAVCAQMV 10
EA+CA M+
Sbjct: 2735 EAICAAMI 2742


>sp|POLG_BCMNN|GENOME polyprotein|Bean common mosaic necrosis virus

Query: 3 EAVCAQMV 10
EA+CA M+
Sbjct: 2720 EAICAAMI 2727


>sp|POLG_CYVV|GENOME polyprotein|Clover yellow vein virus

Query: 3 EAVCAQMV 10
EA+CA M+
Sbjct: 33 EAICASMI 40


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1 QDEAVCAQM 9
QD+ VC M
Sbjct: 2422 QDDVVCCSM 2430


>sp|RDRP_BBSCV|RNA replication polyprotein|Blueberry scorch virus (BBScV)

Query: 1 QDEAVCA 7
+DEA+CA
Sbjct: 939 EDEALCA 945


>sp|POLG_PEMV|GENOME polyprotein|Pepper mottle virus (PeMV)

Query: 3 EAVCAQMV 10
EA+CA M+
Sbjct: 27 EAICAAMI 34




68|SequenceR|345|336|WKVVLQDEAV

>sp|D3_FOWPV|27 kDa core protein|Fowlpox virus (FPV)

Query: 1 WKVVLQDE 8
WKV++ DE
Sbjct: 210 WKVIISDE 217


>sp|D3_FOWPN|27 kDa core protein|Fowlpox virus (strain NVSL) (FPV)

Query: 1 WKVVLQDE 8
WKV++ DE
Sbjct: 210 WKVIISDE 217


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1 WKVVLQDEA 9
W+VV+ DEA
Sbjct: 1762 WEVVIMDEA 1770


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 WKVVLQDEA 9
W+V++ DEA
Sbjct: 1767 WEVIIMDEA 1775


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 1 WKVVLQDEA 9
W+V++ DEA
Sbjct: 1767 WEVIIMDEA 1775


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 WKVVLQDEA 9
W+V++ DEA
Sbjct: 1767 WEVIIMDEA 1775


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 1 WKVVLQDEA 9
W+V++ DEA
Sbjct: 1767 WEVIIMDEA 1775


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1 WKVVLQDEA 9
W+V++ DEA
Sbjct: 1767 WEVIIMDEA 1775


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 1 WKVVLQDEA 9
W+V++ DEA
Sbjct: 1767 WEVIIMDEA 1775


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1 WKVVLQDEA 9
W+V++ DEA
Sbjct: 1767 WEVIIMDEA 1775


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1 WKVVLQDEA 9
W+V++ DEA
Sbjct: 1767 WEVIIMDEA 1775


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 1 WKVVLQDEA 9
W+V++ DEA
Sbjct: 1767 WEVIIMDEA 1775


>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)

Query: 1 WKVVLQDEA 9
W+V++ DEA
Sbjct: 1763 WEVIIMDEA 1771


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1 WKVVLQDEA 9
W+V++ DEA
Sbjct: 1751 WEVIIMDEA 1759


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 1 WKVVLQDEA 9
WK+ LQ+ A
Sbjct: 669 WKITLQEMA 677


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 1 WKVVLQDEA 9
WK+ LQ+ A
Sbjct: 669 WKITLQEMA 677


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 1 WKVVLQDEA 9
WKV LQ+ A
Sbjct: 675 WKVSLQEMA 683


>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)

Query: 1 WKVVLQDEA 9
W V+L DE+
Sbjct: 202 WHVLLDDES 210


>sp|RDRP_P1AMV|RNA replication protein|Plantago asiatica mosaic potexvirus (P1AMV)

Query: 2 KVVLQDEA 9
K V+QDEA
Sbjct: 17 KAVIQDEA 24


>sp|GAG_SIVTN|GAG polyprotein|Simian immunodeficiency virus (isolate TAN1)

Query: 1 WKVVLQ 6
WK++LQ
Sbjct: 58 WKIILQ 63


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 1 WKVVLQDEA 9
W+V + DEA
Sbjct: 1775 WEVAIMDEA 1783


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 1 WKVVLQDEA 9
W+V + DEA
Sbjct: 1775 WEVAIMDEA 1783


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 1 WKVVLQDEA 9
W+V + DEA
Sbjct: 1773 WEVAIMDEA 1781


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 1 WKVVLQDEA 9
W+V + DEA
Sbjct: 1773 WEVAIMDEA 1781




69|SequenceR|350|341|LASSQWKVVL

>sp|VF355_IIV3|PUTATIVE CTD phosphatase-like protein 355R|Invertebrate iridescent virus 3

Query: 1 LASSQWKVV 9
L + QWK++
Sbjct: 126 LVTDQWKII 134


>sp|PAP_GAHVM|DNA polymerase processivity factor|Gallid herpesvirus 2 (strain

Query: 4 SQWKVVL 10
S WK+VL
Sbjct: 24 SSWKIVL 30




70|SequenceR|355|346|WTNVDLASSQ

>sp|CAPS2_SPV1|CAPSID protein VP10|Sulfolobus polyhedral virus 1 (SPV1)

Query: 2 TNVDLASSQ 10
TN+DL+S Q
Sbjct: 17 TNIDLSSQQ 25


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 1 WTNVDLASSQ 10
WTNVD+ ++
Sbjct: 2291 WTNVDIQPAR 2300


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 1 WTNVDLASSQ 10
WTNVD+ ++
Sbjct: 2291 WTNVDIQPAR 2300


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 1 WTNVDLASSQ 10
WTNVD+ ++
Sbjct: 2289 WTNVDIQPAR 2298


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 1 WTNVDLASSQ 10
WTNVD+ ++
Sbjct: 2289 WTNVDIQPAR 2298


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 1 WTNVDLASSQ 10
WTNVD+ ++
Sbjct: 2289 WTNVDIQPAR 2298


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 1 WTNVDLASSQ 10
WTNVD+ ++
Sbjct: 2289 WTNVDIQPAR 2298


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1 WTNVDLASSQ 10
WTN+D+ ++
Sbjct: 2290 WTNIDIQPAR 2299


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1 WTNVDLASSQ 10
WTN+D+ ++
Sbjct: 2289 WTNIDIQPAK 2298


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 1 WTNVDLASSQ 10
WTN+D+ ++
Sbjct: 2289 WTNIDIQPAR 2298




71|SequenceR|360|351|FWEIMWTNVD

>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 1 FWEIMWTNV 9
F E+ WTNV
Sbjct: 2096 FNEVTWTNV 2104


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 1 FWEIMWTNV 9
F E+ WTNV
Sbjct: 2095 FNEVTWTNV 2103


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 1 FWEIMWTNV 9
F E+ WTNV
Sbjct: 2105 FNEVTWTNV 2113


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 1 FWEIMWTNV 9
F E+ WTNV
Sbjct: 2087 FNEVTWTNV 2095


>sp|POLG_SVDVH|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 1 FWEIMWTNV 9
F E+ WTNV
Sbjct: 2087 FNEVTWTNV 2095


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 1 FWEIMWTNV 9
F E+ WTNV
Sbjct: 2095 FNEVTWTNV 2103


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 1 FWEIMWTNV 9
F E+ WTNV
Sbjct: 2087 FNEVTWTNV 2095


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 1 FWEIMWTNV 9
F E+ WTNV
Sbjct: 2085 FNEVTWTNV 2093


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 1 FWEIMWTNV 9
F E+ WTNV
Sbjct: 2097 FNEVTWTNV 2105


>sp|POLG_SVDVU|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 1 FWEIMWTNV 9
F E+ WTNV
Sbjct: 2087 FNEVTWTNV 2095


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 1 FWEIMWTNV 9
F E+ WTNV
Sbjct: 2098 FNEVTWTNV 2106


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 1 FWEIMWTNV 9
F E+ WTNV
Sbjct: 2089 FNEVTWTNV 2097


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 1 FWEIMWTNV 9
F E+ WTNV
Sbjct: 2086 FNEVTWTNV 2094


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 1 FWEIMWTNV 9
F E+ WTNV
Sbjct: 2103 FNEVTWTNV 2111


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 1 FWEIMWTNV 9
F E+ WTNV
Sbjct: 2093 FNEVTWTNV 2101


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 1 FWEIMWTNV 9
F E+ WTNV
Sbjct: 2086 FNEVTWTNV 2094


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 1 FWEIMWTNV 9
F E+ WTNV
Sbjct: 2085 FNELTWTNV 2093


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 FWEIMWTNVD 10
FW I TNV+
Sbjct: 7066 FWTIFCTNVN 7075


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 FWEIMWTNVD 10
FW I TNV+
Sbjct: 7070 FWTIFCTNVN 7079


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 1 FWEIMWTNVD 10
FW I TNV+
Sbjct: 7014 FWTIFCTNVN 7023


>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 WEIMWTN 8
WEI WT+
Sbjct: 983 WEIWWTD 989


>sp|CAPSD_AEDEV|CAPSID protein VP1/VP2|Aedes densonucleosis virus (strain GKV

Query: 1 FWEIMWTNVD 10
FW MW D
Sbjct: 93 FWASMWDQTD 102


>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 WEIMWT 7
WEI WT
Sbjct: 984 WEIWWT 989


>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 WEIMWT 7
WEI WT
Sbjct: 980 WEIWWT 985


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2 WEIMWTN 8
WE +W N
Sbjct: 660 WEFVWGN 666


>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2 WEIMWTN 8
WE +W N
Sbjct: 660 WEFVWGN 666


>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2 WEIMWTN 8
WE +W N
Sbjct: 659 WEFVWGN 665


>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2 WEIMWTN 8
WE +W N
Sbjct: 659 WEFVWGN 665


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2 WEIMWTN 8
WE +W N
Sbjct: 660 WEFVWGN 666


>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2 WEIMWTN 8
WE +W N
Sbjct: 660 WEFVWGN 666


>sp|TG21_GAHVM|TEGUMENT protein UL21 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 FWEIMW 6
WEI W
Sbjct: 292 LWEIFW 297


>sp|PG193_VACCW|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain Western

Query: 2 WEIMWTNV 9
W+ M+TNV
Sbjct: 53 WQTMYTNV 60


>sp|VE1_BPV4|REPLICATION protein E1|Bos taurus papillomavirus 4 (Bovine

Query: 1 FWEIMWTNVD 10
F+E +WT +D
Sbjct: 572 FFERLWTQLD 581


>sp|VF467_IIV3|UNCHARACTERIZED protein 061R|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 WEIMWTNV 9
W ++WT +
Sbjct: 454 WSLIWTTI 461


>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain

Query: 2 WEIMWTNV 9
W+ M+TNV
Sbjct: 53 WQTMYTNV 60


>sp|CAPSD_AADNV|CAPSID protein VP1/VP2|Aedes albopictus densovirus (isolate

Query: 1 FWEIMWTNVD 10
FW MW D
Sbjct: 90 FWGSMWDQTD 99


>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12

Query: 1 FWEIMWTNVD 10
F+E +WT +D
Sbjct: 567 FFERLWTQLD 576


>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)

Query: 2 WEIMWTNV 9
W+ M+TNV
Sbjct: 53 WQTMYTNV 60


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 1 FWEIMWTNV 9
F +I WTNV
Sbjct: 2054 FHKIDWTNV 2062


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 2 WEIMW 6
W++MW
Sbjct: 1609 WDVMW 1613


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 1 FWEIMWTN 8
FW+ +WT+
Sbjct: 925 FWKEIWTS 932


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 FWEIMWTNVD 10
FW + TNV+
Sbjct: 7022 FWTVFCTNVN 7031


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1 FWEIMWTNVD 10
FW + TNV+
Sbjct: 7042 FWTVFCTNVN 7051


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 FWEIMWTNVD 10
FW + TNV+
Sbjct: 7072 FWTVFCTNVN 7081


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 2 WEIMW 6
W++MW
Sbjct: 1608 WDVMW 1612


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2 WEIMW 6
W++MW
Sbjct: 1608 WDVMW 1612


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 2 WEIMW 6
W++MW
Sbjct: 1608 WDVMW 1612


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 1 FWEIMWTN 8
F E+ WTN
Sbjct: 2087 FNEVTWTN 2094


>sp|KITH_ALHV1|THYMIDINE kinase|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 FWEIMWTNV 9
FW ++TNV
Sbjct: 276 FWTEVYTNV 284


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2 WEIMW 6
W++MW
Sbjct: 1608 WDVMW 1612


>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 WEIMWT 7
WE+ WT
Sbjct: 985 WEVWWT 990


>sp|KITH_AHV1W|THYMIDINE kinase|Alcelaphine herpesvirus 1 (strain WC11)

Query: 1 FWEIMWTNV 9
FW ++TNV
Sbjct: 274 FWTEVYTNV 282


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2 WEIMW 6
W++MW
Sbjct: 1608 WDVMW 1612


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 2 WEIMWTNVD 10
WE WTNVD
Sbjct: 2288 WE-EWTNVD 2295


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 2 WEIMWTNVD 10
WE WTNVD
Sbjct: 2288 WE-EWTNVD 2295


>sp|PTPN1_MDBVW|PROBABLE tyrosine phosphatase protein N1|Microplitis demolitor bracovirus

Query: 1 FWEIMWTN 8
FW+ +W N
Sbjct: 108 FWKAVWQN 115


>sp|PORTL_BPKVM|PORTAL protein|Vibrio phage KVP40 (isolate Vibrio

Query: 3 EIMWTNVD 10
E++W N+D
Sbjct: 96 EVVWLNLD 103




72|SequenceR|365|356|SDVDPFWEIM

>sp|VG51_ICHVA|PUTATIVE membrane protein ORF51|Ictalurid herpesvirus 1 (strain Auburn)

Query: 4 DPFWEIM 10
DPFW+++
Sbjct: 83 DPFWKLI 89


>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)

Query: 1 SDVDPFWEIM 10
S+ +P WE+M
Sbjct: 870 SNGNPVWEVM 879


>sp|MVP_MSTV|MOVEMENT protein|Maize stripe virus (MStV)

Query: 3 VDPFW 7
VDPFW
Sbjct: 94 VDPFW 98


>sp|CAPSD_BPCA1|MAJOR capsid protein|Bacteroides phage crAss001 (Bacteroides phage

Query: 2 DVDPFWE 8
DVDPF++
Sbjct: 399 DVDPFYD 405


>sp|L_IPPYV|RNA-DIRECTED RNA polymerase L|Ippy mammarenavirus (isolate Rat/Central African

Query: 2 DVDPFWEIM 10
DVD FW +
Sbjct: 1930 DVDQFWHYL 1938


>sp|212L_IIV6|PUTATIVE MSV199 domain-containing protein 212L|Invertebrate iridescent

Query: 4 DPFWEIM 10
D FW+IM
Sbjct: 50 DYFWQIM 56


>sp|POL1_BBWVS|RNA1 polyprotein|Broad bean wilt virus 1

Query: 3 VDPFW 7
+DPFW
Sbjct: 521 LDPFW 525


>sp|TR443_MIMIV|THIOREDOXIN domain-containing protein R443|Acanthamoeba polyphaga mimivirus

Query: 1 SDVDPFWE 8
+D+DP W+
Sbjct: 52 NDIDPAWQ 59


>sp|VF184_IIV6|PUTATIVE helicase 184R|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 DVDPFWEIM 10
D+DPF++++
Sbjct: 761 DIDPFFKLI 769


>sp|L_TUPVT|RNA-DIRECTED RNA polymerase L|Tupaia virus (isolate Tupaia/Thailand/-/1986)

Query: 5 PFWEI 9
PFWE+
Sbjct: 16 PFWEL 20


>sp|CAPSD_HIS1I|MAJOR capsid protein|His1 virus (isolate Australia/Victoria) (His1V)

Query: 1 SDVDPFWEIM 10
SDV WE++
Sbjct: 42 SDVTTLWELL 51


>sp|MVP_RSVM|MOVEMENT protein|Rice stripe virus (isolate M)

Query: 3 VDPFW 7
VDP+W
Sbjct: 94 VDPYW 98


>sp|MVP_RSVT|MOVEMENT protein|Rice stripe virus (isolate T)

Query: 3 VDPFW 7
VDP+W
Sbjct: 94 VDPYW 98


>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 1 SDVDPFWEIM 10
+++D WE+M
Sbjct: 275 AEIDKGWELM 284


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 2 DVDPFWE 8
DVD WE
Sbjct: 1760 DVDSIWE 1766




73|SequenceR|370|361|LTTPESDVDP

>sp|NCAP_RINDL|NUCLEOPROTEIN virus (strain L) (RDV)

Query: 2 TTPESDVDP 10
TTPE+D DP
Sbjct: 477 TTPEADTDP 485


>sp|Y05G_BPT4|UNCHARACTERIZED 38.9 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 TTPESDVD 9
+TPESDVD
Sbjct: 17 STPESDVD 24


>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1 LTTPESDVDP 10
T PE D DP
Sbjct: 364 FTAPEKDSDP 373


>sp|NCAP_RINDU|NUCLEOPROTEIN virus (strain Kuwait 82/1)

Query: 2 TTPESDVDP 10
TTPE D DP
Sbjct: 477 TTPEVDTDP 485


>sp|H962R_ASFM2|PUTATIVE primase C962R|African swine fever virus (isolate

Query: 1 LTTPESDVDP 10
+T PES +DP
Sbjct: 192 VTNPESCLDP 201


>sp|TERS_BPMU|PROBABLE terminase, small subunit gp27|Escherichia phage Mu (Bacteriophage

Query: 1 LTTPESDVD 9
+ PESDVD
Sbjct: 117 IENPESDVD 125


>sp|M1249_ASFB7|MINOR capsid protein M1249L|African swine fever virus (strain

Query: 1 LTTPESDVDP 10
+TTP S+ P
Sbjct: 997 MTTPSSETQP 1006


>sp|T3MO_BPP1|TYPE III restriction-modification enzyme EcoPI|Escherichia phage P1

Query: 1 LTTPESDVD 9
LTTP DVD
Sbjct: 559 LTTPIEDVD 567


>sp|RDRP_THOGV|RNA-DIRECTED RNA polymerase catalytic subunit|Thogoto virus (isolate SiAr 126)

Query: 1 LTTPESDVDP 10
L TP S+++P
Sbjct: 3 LFTPRSEINP 12




74|SequenceR|375|366|VSEWSLTTPE

>sp|POL1_CPMVS|RNA1 polyprotein|Cowpea mosaic virus (strain SB)

Query: 2 SEWSLTTP 9
SEW L TP
Sbjct: 1199 SEWHLDTP 1206


>sp|POL_SIVV1|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 VSEWSLTTPE 10
+ EW L TPE
Sbjct: 823 LQEWGLETPE 832


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 3 EWSLTTP 9
EW LTTP
Sbjct: 233 EWILTTP 239


>sp|POLG_ZYMVS|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 1 VSEWSLTTPE 10
VSE S+T PE
Sbjct: 2169 VSESSMTIPE 2178


>sp|L_LBVAV|RNA-DIRECTED RNA polymerase L|Lettuce big-vein associated virus (isolate

Query: 1 VSEWSLTTP 9
+ EW L+TP
Sbjct: 963 IREWLLSTP 971


>sp|POLG_ZYMVC|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 1 VSEWSLTTPE 10
VSE S+T PE
Sbjct: 2166 VSESSMTIPE 2175


>sp|Y009_OSHVF|PUTATIVE RING finger protein ORF9|Ostreid herpesvirus 1 (isolate France)

Query: 3 EWSLTTP 9
EW +TTP
Sbjct: 246 EWEITTP 252


>sp|POLG_LMV0|GENOME polyprotein|Lettuce mosaic virus (strain 0

Query: 1 VSEWSLTTP 9
VSE S+TTP
Sbjct: 2339 VSETSVTTP 2347


>sp|POLG_LMVE|GENOME polyprotein|Lettuce mosaic virus (strain E)

Query: 1 VSEWSLTTP 9
VSE S+TTP
Sbjct: 2339 VSETSVTTP 2347


>sp|YR623_MIMIV|UNCHARACTERIZED protein R623|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 WSLTTPE 10
W+LTTP+
Sbjct: 106 WTLTTPD 112


>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 EWSLTTPE 10
+W LTTP+
Sbjct: 798 KWGLTTPD 805


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 EWSLTTPE 10
+W LTTP+
Sbjct: 793 KWGLTTPD 800




75|SequenceR|380|371|NTAQSVSEWS

>sp|DPOL_PSHV1|DNA polymerase catalytic subunit|Psittacid herpesvirus 1 (isolate

Query: 2 TAQSVSEW 9
TAQS S W
Sbjct: 115 TAQSCSAW 122


>sp|VP6_ROTPC|INTERMEDIATE capsid protein VP6|Rotavirus C (strain RVC/Pig/United

Query: 1 NTAQSVSEWS 10
N++QS+ WS
Sbjct: 131 NSSQSIKNWS 140


>sp|VP6_ROTBS|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate

Query: 1 NTAQSVSEWS 10
N++QS+ WS
Sbjct: 131 NSSQSIKNWS 140




76|SequenceR|385|376|QQITWNTAQS

>sp|L_SBVBH|RNA-DIRECTED RNA polymerase L|Bovine Schmallenberg virus (isolate

Query: 1 QQITWNTAQS 10
+QITWN Q+
Sbjct: 1827 EQITWNNWQT 1836


>sp|SPIKE_BC279|SPIKE glycoprotein|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 3 ITWNTAQ 9
I WNTAQ
Sbjct: 425 IAWNTAQ 431


>sp|L_RINDR|RNA-DIRECTED RNA polymerase L|Rinderpest virus (strain RBOK) (RDV)

Query: 3 ITWNTAQ 9
+TW+T+Q
Sbjct: 1425 VTWSTSQ 1431




77|SequenceR|390|381|PKLKDQQITW

>sp|CAPSD_RHDVR|SUBGENOMIC capsid protein VP60|Rabbit calicivirus (Ra/LV/RHDV/RCV/1995/IT)

Query: 1 PKLKDQQITW 10
P+ DQQ TW
Sbjct: 59 PQQVDQQETW 68


>sp|POLG_RHDVB|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 PKLKDQQITW 10
P+ DQQ TW
Sbjct: 1824 PQQVDQQETW 1833


>sp|POLG_RHDVA|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 PKLKDQQITW 10
P+ DQQ TW
Sbjct: 1824 PQQVDQQETW 1833


>sp|POLG_RHDVS|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 PKLKDQQITW 10
P+ DQQ TW
Sbjct: 1824 PQQVDQQETW 1833


>sp|POLG_RHDVF|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 PKLKDQQITW 10
P+ DQQ TW
Sbjct: 1824 PQQVDQQETW 1833


>sp|POLG_RHDV3|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 PKLKDQQITW 10
P+ DQQ TW
Sbjct: 1824 PQQVDQQETW 1833


>sp|VF436_IIV3|UNCHARACTERIZED protein 060L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 PKLKDQQITW 10
PK KD+ I W
Sbjct: 257 PKEKDKVIVW 266


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 3 LKDQQITW 10
L DQ +TW
Sbjct: 547 LTDQDVTW 554




78|SequenceR|395|386|NYCWFPKLKD

>sp|RDRP_TMOB|REPLICASE large subunit|Tobamovirus Ob

Query: 1 NYCWFPKLKD 10
NY WFPK+KD
Sbjct: 363 NY-WFPKMKD 371


>sp|RDRP_PMMVS|REPLICASE large subunit|Pepper mild mottle virus (strain

Query: 1 NYCWFPKLKD 10
NY WFPK+KD
Sbjct: 362 NY-WFPKMKD 370


>sp|RDRP_PMMVJ|REPLICASE large subunit|Pepper mild mottle virus (strain

Query: 1 NYCWFPKLKD 10
NY WFPK+KD
Sbjct: 362 NY-WFPKMKD 370


>sp|RDRP_TMGMV|REPLICASE large subunit|Tobacco mild green mosaic virus

Query: 4 WFPKLKD 10
WFPK+KD
Sbjct: 365 WFPKMKD 371


>sp|RDRP_TOMS1|REPLICASE large subunit|Tomato mosaic virus (strain S-1)

Query: 1 NYCWFPKLKD 10
NY WFPK++D
Sbjct: 363 NY-WFPKMRD 371


>sp|RDRP_TOML|REPLICASE large subunit|Tomato mosaic virus (strain L)

Query: 1 NYCWFPKLKD 10
NY WFPK++D
Sbjct: 363 NY-WFPKMRD 371


>sp|RDRP_TOMK2|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh

Query: 1 NYCWFPKLKD 10
NY WFPK++D
Sbjct: 363 NY-WFPKMRD 371


>sp|RDRP_TOMK1|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh

Query: 1 NYCWFPKLKD 10
NY WFPK++D
Sbjct: 363 NY-WFPKMRD 371


>sp|RDRP_TMVOM|REPLICASE large subunit|Tobacco mosaic virus (strain OM)

Query: 1 NYCWFPKLKD 10
NY WFPK++D
Sbjct: 363 NY-WFPKMRD 371


>sp|RDRP_TMVKR|REPLICASE large subunit|Tobacco mosaic virus (strain Korean

Query: 1 NYCWFPKLKD 10
NY WFPK++D
Sbjct: 363 NY-WFPKMRD 371


>sp|RDRP_TMVB|REPLICASE large subunit|Tobacco mosaic virus (strain B935A)

Query: 1 NYCWFPKLKD 10
NY WFPK++D
Sbjct: 363 NY-WFPKMRD 371


>sp|RDRP_TMV|REPLICASE large subunit|Tobacco mosaic virus (strain vulgare)

Query: 1 NYCWFPKLKD 10
NY WFPK++D
Sbjct: 363 NY-WFPKMRD 371


>sp|RDRP_TBRFV|REPLICASE large subunit|Tomato brown rugose fruit virus

Query: 1 NYCWFPKLKD 10
NY WFPK++D
Sbjct: 363 NY-WFPKMRD 371


>sp|RDRP_TMVRA|REPLICASE large subunit|Tobacco mosaic virus (strain Rakkyo)

Query: 1 NYCWFPKLKD 10
NY WFPK++D
Sbjct: 363 NY-WFPKMRD 371


>sp|1A_PSVJ|REPLICATION protein 1a|Peanut stunt virus (strain J)

Query: 4 WFPKLKD 10
WFP LKD
Sbjct: 330 WFPSLKD 336


>sp|1A_PZSVT|REPLICATION protein 1a|Pelargonium zonate spot virus (isolate

Query: 4 WFPKLKD 10
WFPK++D
Sbjct: 315 WFPKVRD 321


>sp|1A_CMVQ|REPLICATION protein 1a|Cucumber mosaic virus (strain Q)

Query: 4 WFPKLKD 10
WFP +KD
Sbjct: 335 WFPSMKD 341


>sp|RDRP_YOMV|REPLICASE large subunit|Youcai mosaic virus (YoMV)

Query: 4 WFPKLKD 10
WFPK++D
Sbjct: 364 WFPKVRD 370


>sp|RDRP_TVCV|REPLICASE large subunit|Turnip vein-clearing virus (TVCV)

Query: 4 WFPKLKD 10
WFPK++D
Sbjct: 364 WFPKVRD 370


>sp|1A_CMVY|REPLICATION protein 1a|Cucumber mosaic virus (strain Y)

Query: 4 WFPKLKD 10
WFP +KD
Sbjct: 335 WFPSIKD 341


>sp|1A_CMVO|REPLICATION protein 1a|Cucumber mosaic virus (strain O)

Query: 4 WFPKLKD 10
WFP +KD
Sbjct: 335 WFPSIKD 341


>sp|1A_CMVNT|REPLICATION protein 1a|Cucumber mosaic virus (strain NT9)

Query: 4 WFPKLKD 10
WFP +KD
Sbjct: 335 WFPSIKD 341


>sp|1A_CMVIX|REPLICATION protein 1a|Cucumber mosaic virus (strain Ixora)

Query: 4 WFPKLKD 10
WFP +KD
Sbjct: 335 WFPSIKD 341


>sp|1A_CMVII|REPLICATION protein 1a|Cucumber mosaic virus (strain Iizuka)

Query: 4 WFPKLKD 10
WFP +KD
Sbjct: 335 WFPSIKD 341


>sp|1A_CMVFN|REPLICATION protein 1a|Cucumber mosaic virus (strain FNY)

Query: 4 WFPKLKD 10
WFP +KD
Sbjct: 335 WFPSIKD 341


>sp|RDRP_ORSVC|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Korean

Query: 4 WFPKLKD 10
WFPK+KD
Sbjct: 364 WFPKVKD 370


>sp|RDRP_ORSVS|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Singapore

Query: 4 WFPKLKD 10
WFPK+KD
Sbjct: 364 WFPKVKD 370


>sp|VG16_BPP1|GENE 16 protein|Escherichia phage P1 (Bacteriophage P1)

Query: 2 YCWF 5
YCWF
Sbjct: 116 YCWF 119


>sp|GM_SHV21|ENVELOPE glycoprotein M|Saimiriine herpesvirus 2 (strain 11)

Query: 3 CWFPKLKD 10
C+FP L D
Sbjct: 45 CYFPNLVD 52


>sp|YR327_MIMIV|UNCHARACTERIZED protein R327|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 YCWFPKLKD 10
Y W PKL D
Sbjct: 529 YVWNPKLGD 537


>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain

Query: 1 NYCWFP 6
N+ WFP
Sbjct: 1858 NFSWFP 1863


>sp|VIF_JEMBR|VIRION infectivity factor|Jembrana disease virus (JDV)

Query: 1 NYCWFP 6
N CW+P
Sbjct: 163 NLCWYP 168


>sp|DPOL_CEV01|DNA polymerase|Chrysochromulina ericina virus (CeV01)

Query: 1 NYCWFPK 7
N CW PK
Sbjct: 695 NLCWVPK 701


>sp|POLR_NORAV|REPLICATION polyprotein|Nora virus

Query: 2 YCWFP 6
YCW P
Sbjct: 864 YCWSP 868


>sp|Y67_BPT3|UNCHARACTERIZED gene 6.7 protein|Enterobacteria phage T3 (Bacteriophage T3)

Query: 3 CWFPKLK 9
CW PK+K
Sbjct: 2 CWKPKVK 8


>sp|TERL_BPMU|PROBABLE terminase, large subunit gp28|Escherichia phage Mu (Bacteriophage

Query: 4 WFPKLK 9
W PKLK
Sbjct: 445 WMPKLK 450


>sp|1A_TAV|REPLICATION protein 1a|Tomato aspermy virus (TAV)

Query: 4 WFPKLKD 10
WF LKD
Sbjct: 334 WFTSLKD 340


>sp|YE2_MDBVW|UNCHARACTERIZED protein E2|Microplitis demolitor bracovirus (isolate Webb)

Query: 4 WFPKLKD 10
WF KL+D
Sbjct: 69 WFRKLED 75


>sp|P5_PBCV1|MINOR capsid protein P5|Paramecium bursaria Chlorella virus 1

Query: 1 NYCWFPKLKD 10
N C+ P L+D
Sbjct: 52 NLCYTPTLED 61


>sp|ORF24_TTVV3|ORF2/4 protein|Torque teno virus (isolate Human/Finland/Hel32/2002)

Query: 2 YCWFPKLKD 10
Y W PK +D
Sbjct: 256 YTWMPKAQD 264


>sp|POL_FFV|PRO-POL polyprotein|Feline foamy virus (FFV) (Feline

Query: 1 NYCWFPKLK 9
NY W+PK+K
Sbjct: 831 NY-WWPKMK 838


>sp|001R_FRG3G|PUTATIVE transcription factor 001R|Frog virus 3 (isolate Goorha)

Query: 3 CWFPKLKD 10
CW K KD
Sbjct: 91 CWVSKFKD 98


>sp|US03_HCMVT|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1 NYCWF 5
N CWF
Sbjct: 42 NQCWF 46


>sp|US03_HCMVA|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 NYCWF 5
N CWF
Sbjct: 42 NQCWF 46




79|SequenceR|400|391|PYVSINYCWF

>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 4 SINYCWF 10
S+NY WF
Sbjct: 1184 SVNYGWF 1190


>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)

Query: 1 PYVSINYCW 9
PY +NY W
Sbjct: 1745 PYKFLNYIW 1753


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 4 SINYCWF 10
S+NY WF
Sbjct: 1184 SVNYGWF 1190


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 4 SINYCWF 10
S+NY WF
Sbjct: 1184 SVNYGWF 1190


>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain

Query: 1 PYVSINYCW 9
PY +NY W
Sbjct: 1745 PYKFMNYIW 1753


>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)

Query: 1 PYVSINYCW 9
PY +NY W
Sbjct: 1745 PYKFMNYIW 1753


>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I86A3|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/Tennessee/5/1986

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I85A7|POLYMERASE acidic protein|Influenza A virus (strain A/Ruddy

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I83A5|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I83A4|POLYMERASE acidic protein|Influenza A virus (strain A/Turkey/Ireland/1378/1983

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I80AD|POLYMERASE acidic protein|Influenza A virus (strain A/Gull/Minnesota/945/1980

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I80A8|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I80A6|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hokkaido/8/1980

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I79A7|POLYMERASE acidic protein|Influenza A virus (strain A/Grey

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I79A1|POLYMERASE acidic protein|Influenza A virus (strain A/Pintail/Alberta/119/1979

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I78AC|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I77AF|POLYMERASE acidic protein|Influenza A virus (strain A/Gull/Maryland/704/1977

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I68A3|POLYMERASE acidic protein|Influenza A virus (strain A/Turkey/Ontario/6118/1968

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I66A1|POLYMERASE acidic protein|Influenza A virus (strain A/Turkey/Wisconsin/1/1966

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I56A2|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/England/1/1956

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I56A1|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Czechoslovakia/1956

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I49A1|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Germany/1949

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I34A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fowl

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 691 PWVLLNASWF 700


>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 694 PWVLLNASWF 703


>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 691 PWVLLNASWF 700


>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 675 PWVLLNASWF 684


>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort

Query: 1 PYVSINYCWF 10
P+V +N WF
Sbjct: 698 PWVLLNASWF 707


>sp|VP16_EHV4|TEGUMENT protein VP16 homolog|Equine herpesvirus 4 (strain 1942)

Query: 2 YVSINYCW 9
+VS++Y W
Sbjct: 265 FVSLHYTW 272


>sp|POLB_CHPVU|ORFB polyprotein|Cryphonectria hypovirus 1 (strain Euro7)

Query: 1 PYVSINY 7
PY+SI Y
Sbjct: 2979 PYISIKY 2985


>sp|DEPOL_BPK51|DEPOLYMERASE, capsule KL64-specific|Klebsiella phage P510 (Bacteriophage P510)

Query: 3 VSINYC 8
+S+NYC
Sbjct: 496 ISLNYC 501


>sp|VG11_EHV2|UNCHARACTERIZED gene 11 protein|Equine herpesvirus 2 (strain 86/87)

Query: 1 PYVSINYCW 9
PY+ +CW
Sbjct: 319 PYLFSPWCW 327


>sp|RLIG_ASFB7|PUTATIVE RNA-ligase|African swine fever virus (strain

Query: 6 NYCW 9
NYCW
Sbjct: 172 NYCW 175


>sp|VF448_ASFWA|UNCHARACTERIZED protein M448R|African swine fever virus (isolate

Query: 6 NYCW 9
NYCW
Sbjct: 172 NYCW 175


>sp|VF448_ASFP4|PUTATIVE RNA-ligase|African swine fever virus (isolate

Query: 6 NYCW 9
NYCW
Sbjct: 172 NYCW 175




80|SequenceR|405|396|KDHLMPYVSI

>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)

Query: 1 KDHLMPYVS 9
KDH++PY +
Sbjct: 1184 KDHIVPYAA 1192


>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)

Query: 1 KDHLMPYVS 9
KDH++PY +
Sbjct: 1199 KDHIVPYAA 1207


>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)

Query: 1 KDHLMPY 7
KDH++PY
Sbjct: 1199 KDHIVPY 1205


>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)

Query: 1 KDHLMPY 7
KDH++PY
Sbjct: 1199 KDHIVPY 1205


>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)

Query: 1 KDHLMPY 7
KDH++PY
Sbjct: 1200 KDHIVPY 1206


>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)

Query: 1 KDHLMPY 7
KDH++PY
Sbjct: 1200 KDHIVPY 1206


>sp|V198_FOWPN|PUTATIVE C-type lectin protein FPV198|Fowlpox virus (strain NVSL) (FPV)

Query: 1 KDHLMPY 7
KDH MP+
Sbjct: 103 KDHWMPF 109


>sp|L_IPPYV|RNA-DIRECTED RNA polymerase L|Ippy mammarenavirus (isolate Rat/Central African

Query: 1 KDHLMPYVS 9
+ HL+PY+S
Sbjct: 1746 EKHLLPYMS 1754


>sp|MU2_REOVD|MICROTUBULE-ASSOCIATED protein mu-2|Reovirus type 3 (strain Dearing)

Query: 1 KDHLMPYVSI 10
+D +PYVSI
Sbjct: 636 EDGFIPYVSI 645


>sp|MU2_REOVL|MICROTUBULE-ASSOCIATED protein mu-2|Reovirus type 1 (strain Lang)

Query: 1 KDHLMPYVSI 10
+D +PYVSI
Sbjct: 636 EDGFIPYVSI 645


>sp|L_CPXVB|RNA-DIRECTED RNA polymerase L|Cupixi mammarenavirus (isolate Rat/Brasil/BeAn

Query: 1 KDHLMPYVS 9
++HL+P++S
Sbjct: 1750 EEHLIPFMS 1758


>sp|POLS_MIDDV|STRUCTURAL polyprotein|Middelburg virus

Query: 1 KDHLMPY 7
KDH++P+
Sbjct: 1203 KDHVVPF 1209


>sp|VP4_FDVS|UNCHARACTERIZED protein VP4|Fiji disease virus (isolate Sugarcane)

Query: 1 KDHLMPYVSI 10
+D ++PYV I
Sbjct: 965 EDTILPYVGI 974


>sp|YR358_MIMIV|UNCHARACTERIZED protein R358|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KDHLMPYVS 9
+ H++PY+S
Sbjct: 6 RKHMIPYLS 14




81|SequenceR|410|401|YPEGVKDHLM

>sp|VF467_IIV3|UNCHARACTERIZED protein 061R|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 PEGVKDHLM 10
PE V+D LM
Sbjct: 351 PEAVRDQLM 359


>sp|NS2_BANNV|NON-STRUCTURAL protein 2|Banna virus (BAV)

Query: 2 PEGVKDHL 9
PEGV DH+
Sbjct: 228 PEGVFDHI 235


>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)

Query: 1 YPEGVKD 7
YP+GVKD
Sbjct: 323 YPDGVKD 329


>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)

Query: 1 YPEGVKD 7
YP+GVKD
Sbjct: 323 YPDGVKD 329


>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)

Query: 2 PEGVKDHL 9
PEG++ HL
Sbjct: 456 PEGIRRHL 463


>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)

Query: 2 PEGVKDHL 9
PEG++ HL
Sbjct: 456 PEGIRRHL 463


>sp|V198_FOWPN|PUTATIVE C-type lectin protein FPV198|Fowlpox virus (strain NVSL) (FPV)

Query: 4 GVKDHLM 10
GVKDH M
Sbjct: 101 GVKDHWM 107


>sp|RECR_BPP1|RECOMBINASE cre|Escherichia phage P1 (Bacteriophage P1)

Query: 2 PEGVKDHLM 10
PE V+D+L+
Sbjct: 68 PEDVRDYLL 76


>sp|TMP_BPBMU|PROBABLE tape measure protein|Burkholderia phage BcepMu (isolate -/United

Query: 2 PEGVKDHL 9
P+GVKD +
Sbjct: 810 PDGVKDQV 817


>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)

Query: 1 YPEGVKDHLM 10
YP GVK +++
Sbjct: 12 YPRGVKKNVL 21


>sp|CP79_BP186|UNCHARACTERIZED 8.8 kDa protein in|Escherichia phage 186 (Bacteriophage 186)

Query: 2 PEGVKDHLM 10
P G DHL+
Sbjct: 10 PSGAGDHLL 18


>sp|SLFN_VACCW|SCHLAFEN-LIKE protein|Vaccinia virus (strain Western Reserve)

Query: 1 YPEGVKD 7
YP+GV+D
Sbjct: 87 YPDGVED 93


>sp|SLFN_VACCC|SCHLAFEN-LIKE protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 YPEGVKD 7
YP+GV+D
Sbjct: 87 YPDGVED 93


>sp|TAT_HV1U4|PROTEIN Tat|Human immunodeficiency virus type 1

Query: 2 PEGVKDH 8
P+G KDH
Sbjct: 59 PQGSKDH 65


>sp|L_LBVAV|RNA-DIRECTED RNA polymerase L|Lettuce big-vein associated virus (isolate

Query: 2 PEGVKDH 8
P+G+ DH
Sbjct: 288 PDGITDH 294


>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)

Query: 1 YPEGVKD 7
YP+GV+D
Sbjct: 325 YPDGVED 331


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 1 YPEGVKDH 8
YPE + DH
Sbjct: 133 YPEYIVDH 140


>sp|TAT_HV19N|PROTEIN Tat|Human immunodeficiency virus type 1

Query: 2 PEGVKDH 8
P+G KDH
Sbjct: 59 PQGSKDH 65




82|SequenceR|415|406|YAQISYPEGV

>sp|Y47_BPT7|PROTEIN 4.7|Escherichia phage T7 (Bacteriophage T7)

Query: 1 YAQISYPEGV 10
YAQ+SY GV
Sbjct: 95 YAQVSYITGV 104


>sp|FIBC_BPT5|STRAIGHT fiber protein pb4|Escherichia phage T5 (Enterobacteria phage

Query: 2 AQISYPEGV 10
QIS P+GV
Sbjct: 181 GQISLPDGV 189




83|SequenceR|420|411|VGEKAYAQIS

>sp|YL613_MIMIV|UNCHARACTERIZED protein L613|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 VGEKAYAQI 9
VGEK YA +
Sbjct: 124 VGEKIYAPL 132




84|SequenceR|425|416|PGESPVGEKA

>sp|GB_GPCMV|ENVELOPE glycoprotein B|Guinea pig cytomegalovirus (strain 22122)

Query: 1 PGESPVGEK 9
PGE+P G K
Sbjct: 807 PGEAPYGYK 815


>sp|TERM_ADES1|PRETERMINAL protein|Snake adenovirus serotype 1 (SnAdV-1)

Query: 1 PGESPVGEKA 10
PGE P G +A
Sbjct: 355 PGEGPSGIRA 364


>sp|PRIM_SUHVK|DNA primase|Suid herpesvirus 1 (strain Kaplan)

Query: 2 GESPVGEKA 10
G SP+GE+A
Sbjct: 335 GRSPLGERA 343




85|SequenceR|430|421|EVKTEPGESP

>sp|VG35_ICHVA|UNCHARACTERIZED protein ORF35|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 VKTEPGES 9
V TEPGES
Sbjct: 90 VTTEPGES 97


>sp|POL_WMSV|GAG-POL polyprotein|Woolly monkey sarcoma virus (WMSV)

Query: 1 EVKTEPGE 8
+VKT PGE
Sbjct: 1318 QVKTRPGE 1325


>sp|PHOSP_ABLVH|PHOSPHOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 1 EVKTEPGESP 10
+VKTEP +P
Sbjct: 152 KVKTEPSSTP 161


>sp|UBIL_NPVOP|UBIQUITIN-LIKE protein|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 2 VKTEPGES 9
V+TEPG++
Sbjct: 15 VETEPGDT 22




86|SequenceR|435|426|KVGINEVKTE

>sp|VP4_LBVAV|PROTEIN 4|Lettuce big-vein associated virus (isolate

Query: 2 VGINEVKT 9
VG NE+KT
Sbjct: 28 VGTNEIKT 35




87|SequenceR|440|431|TITVTKVGIN

***** No hits found ******


88|SequenceR|445|436|PIEKWTITVT

>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 EKWTITVT 10
E WT+TVT
Sbjct: 505 EHWTVTVT 512


>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 EKWTITVT 10
E WT+TVT
Sbjct: 505 EHWTVTVT 512


>sp|VF143_IIV6|PUTATIVE kinase protein 143R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 PIEKWTI 7
PI+KWT+
Sbjct: 32 PIDKWTL 38


>sp|CAPSD_TLCVA|CAPSID protein|Tomato leaf curl virus (strain

Query: 2 IEKWTITVT 10
I+KW+ TVT
Sbjct: 179 IKKWSATVT 187


>sp|074L_FRG3G|UNCHARACTERIZED protein 074L|Frog virus 3 (isolate Goorha)

Query: 1 PIEKWTIT 8
PI WT T
Sbjct: 324 PIRNWTAT 331


>sp|ICP0_SUHVF|E3 ubiquitin-protein ligase ICP0|Suid herpesvirus 1 (strain

Query: 2 IEKWTITVT 10
I++WT+T T
Sbjct: 71 IQRWTLTST 79


>sp|Y05A_BPT4|UNCHARACTERIZED 39.7 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 PIEKW 5
P+EKW
Sbjct: 281 PVEKW 285


>sp|Y562_SIRV1|UNCHARACTERIZED protein 562|Sulfolobus islandicus rod-shaped virus 1

Query: 1 PIEKWTITVT 10
PI +TIT+T
Sbjct: 222 PITAYTITIT 231


>sp|PA_THOGV|POLYMERASE acidic protein|Thogoto virus (isolate SiAr 126)

Query: 2 IEKWTITVT 10
IEKW I T
Sbjct: 388 IEKWQIAAT 396


>sp|KITH_ALHV1|THYMIDINE kinase|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 PIEKWTI 7
P++KW I
Sbjct: 339 PLDKWVI 345


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 1 PIEKWT 6
P+EKW+
Sbjct: 3362 PVEKWS 3367


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 1 PIEKWT 6
P+EKW+
Sbjct: 3362 PVEKWS 3367




89|SequenceR|450|441|KRESKPIEKW

>sp|CAPSD_AHV2H|CAPSID protein|Atkinsonella hypoxylon virus (isolate 2H)

Query: 2 RESKPIEKW 10
RES EKW
Sbjct: 235 RESTAYEKW 243


>sp|YR535_MIMIV|UNCHARACTERIZED protein R535|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KRESKPIEK 9
KRE KPI K
Sbjct: 42 KREIKPIIK 50




90|SequenceR|455|446|NCIIGKRESK

>sp|YR618_MIMIV|UNCHARACTERIZED protein R618|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 NCIIGKRESK 10
NCI+GK+ S+
Sbjct: 25 NCILGKKLSE 34


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 IIGKRESK 10
I+GKRE K
Sbjct: 2945 IMGKREKK 2952


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 IIGKRESK 10
I+GKRE K
Sbjct: 2945 IMGKREKK 2952


>sp|D3_FOWPV|27 kDa core protein|Fowlpox virus (FPV)

Query: 1 NCIIGKRES 9
NC+I K+ES
Sbjct: 182 NCLIRKQES 190


>sp|D3_FOWPN|27 kDa core protein|Fowlpox virus (strain NVSL) (FPV)

Query: 1 NCIIGKRES 9
NC+I K+ES
Sbjct: 182 NCLIRKQES 190




91|SequenceR|460|451|YFITYNCIIG

>sp|POLG_RHDVS|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 YFITYNCI 8
YF+ Y C+
Sbjct: 742 YFVMYGCV 749


>sp|POLG_RHDVF|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 YFITYNCI 8
YF+ Y C+
Sbjct: 742 YFVMYGCV 749


>sp|POLG_RHDVB|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 YFITYNCI 8
YF+ Y C+
Sbjct: 742 YFVMYGCV 749


>sp|POLG_RHDVA|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 YFITYNCI 8
YF+ Y C+
Sbjct: 742 YFVMYGCV 749


>sp|POLG_RHDV3|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 YFITYNCI 8
YF+ Y C+
Sbjct: 742 YFVMYGCV 749


>sp|HEPA_GAHVM|DNA helicase/primase complex-associated protein|Gallid herpesvirus 2

Query: 3 ITYNCIIG 10
+ Y+CIIG
Sbjct: 325 VDYSCIIG 332


>sp|UL13_EHV1V|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Equine herpesvirus 1 (strain V592)

Query: 1 YFITYNCIIG 10
+F+ +C+IG
Sbjct: 361 HFVISDCVIG 370


>sp|UL13_EHV1B|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 1 YFITYNCIIG 10
+F+ +C+IG
Sbjct: 361 HFVISDCVIG 370


>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 TYNCIIG 10
TY C++G
Sbjct: 137 TYTCVLG 143


>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 TYNCIIG 10
TY C++G
Sbjct: 137 TYTCVLG 143


>sp|LT_POVBO|LARGE T antigen|Bovine polyomavirus (BPyV) (Bos taurus

Query: 4 TYNCII 9
TYNC I
Sbjct: 148 TYNCFI 153


>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote

Query: 2 FITYNCII 9
ITYNC +
Sbjct: 3605 LITYNCYV 3612




92|SequenceR|465|456|GGEAQYFITY

>sp|NCAP_BCHK5|NUCLEOPROTEIN coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 GEAQYFITY 10
GE YF++Y
Sbjct: 322 GEPVYFLSY 330


>sp|CAPSD_APRVF|INNER capsid protein VP3|Aedes pseudoscutellaris reovirus (isolate

Query: 1 GGEAQYFITY 10
GG Q+ +TY
Sbjct: 651 GGRTQHSVTY 660




93|SequenceR|470|461|KSFGKGGEAQ

>sp|POLB_CHPVU|ORFB polyprotein|Cryphonectria hypovirus 1 (strain Euro7)

Query: 1 KSFGKGG 7
KSFG+GG
Sbjct: 72 KSFGQGG 78


>sp|POLB_CHPVE|ORFB polyprotein|Cryphonectria hypovirus 1 (strain EP713)

Query: 1 KSFGKGG 7
KSFG+GG
Sbjct: 72 KSFGQGG 78


>sp|L_GOGV|RNA-DIRECTED RNA polymerase L|Alethinophid 1 reptarenavirus (isolate

Query: 1 KSFGKGGEA 9
KSF GGE+
Sbjct: 821 KSFKSGGES 829


>sp|UL95_EHV2|GENE 34 protein|Equine herpesvirus 2 (strain 86/87)

Query: 4 GKGGEA 9
GKGGEA
Sbjct: 95 GKGGEA 100




94|SequenceR|475|466|SSNVTKSFGK

>sp|SPIKE_CVPRM|SPIKE glycoprotein|Porcine respiratory coronavirus (strain RM4)

Query: 3 NVTKSFGK 10
N+T+SFGK
Sbjct: 850 NITQSFGK 857


>sp|SPIKE_CVPRT|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 3 NVTKSFGK 10
N+T+SFGK
Sbjct: 1072 NITQSFGK 1079


>sp|SPIKE_CVPR8|SPIKE glycoprotein|Porcine respiratory coronavirus (strain 86/137004

Query: 3 NVTKSFGK 10
N+T+SFGK
Sbjct: 850 NITQSFGK 857


>sp|SPIKE_CVPPU|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 3 NVTKSFGK 10
N+T+SFGK
Sbjct: 1072 NITQSFGK 1079


>sp|SPIKE_CVPMI|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 3 NVTKSFGK 10
N+T+SFGK
Sbjct: 1074 NITQSFGK 1081


>sp|SPIKE_CVPFS|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 3 NVTKSFGK 10
N+T+SFGK
Sbjct: 1074 NITQSFGK 1081


>sp|SPIKE_CVCAK|SPIKE glycoprotein|Canine coronavirus (strain K378) (CCoV)

Query: 3 NVTKSFGK 10
N+T++FGK
Sbjct: 1078 NITQAFGK 1085


>sp|SPIKE_CVCAI|SPIKE glycoprotein|Canine coronavirus (strain Insavc-1) (CCoV)

Query: 3 NVTKSFGK 10
N+T++FGK
Sbjct: 1076 NITQAFGK 1083


>sp|HEMA_VAR67|PROTEIN OPG185|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 NVTKSFGK 10
N+TKS GK
Sbjct: 262 NITKSIGK 269


>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)

Query: 3 NVTKSFGK 10
NVT SFG+
Sbjct: 221 NVTTSFGR 228


>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 NVTKSFGK 10
NVT SFG+
Sbjct: 254 NVTTSFGR 261


>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)

Query: 3 NVTKSFGK 10
NVT SFG+
Sbjct: 254 NVTTSFGR 261


>sp|NCAP_CVH22|NUCLEOPROTEIN coronavirus 229E (HCoV-229E)

Query: 1 SSNVTKSFG 9
+SNVT+ FG
Sbjct: 258 TSNVTQCFG 266




95|SequenceR|480|471|GYQLISSNVT

>sp|ALYS_BPDP1|LYSIN phage Dp-1 (Bacteriophage Dp-1)

Query: 1 GYQLISSN 8
GY+LIS N
Sbjct: 67 GYELISEN 74


>sp|CAPSD_PAVPN|CAPSID protein VP1|Porcine parvovirus (strain NADL-2) (PPV)

Query: 2 YQLISSNVT 10
+QLIS+N+T
Sbjct: 276 WQLISNNMT 284


>sp|CAPSD_PAVP9|CAPSID protein VP1|Porcine parvovirus (strain 90HS) (PPV)

Query: 2 YQLISSNVT 10
+QLIS+N+T
Sbjct: 276 WQLISNNMT 284


>sp|CAPSD_PAVPK|CAPSID protein VP1|Porcine parvovirus (strain Kresse) (PPV)

Query: 2 YQLISSNVT 10
+QLIS+N+T
Sbjct: 276 WQLISNNMT 284




96|SequenceR|485|476|KLSELGYQLI

>sp|VOLD_BPP2|OLD nuclease|Escherichia phage P2 (Bacteriophage P2)

Query: 2 LSELGYQLI 10
LSE GYQ+I
Sbjct: 320 LSESGYQVI 328


>sp|Y033_NPVAC|UNCHARACTERIZED 20.8 kDa protein in|Autographa californica nuclear polyhedrosis

Query: 1 KLSELGYQLI 10
+L ELGY L+
Sbjct: 59 RLYELGYDLV 68


>sp|MOBD_BPT4|PROBABLE mobile endonuclease D|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 KLSELGYQLI 10
KL+ GYQL+
Sbjct: 92 KLTSRGYQLV 101


>sp|NEC1_PSHV1|NUCLEAR egress protein 1|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 LSELGYQL 9
LSE+GY L
Sbjct: 118 LSEMGYTL 125


>sp|YR618_MIMIV|UNCHARACTERIZED protein R618|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KLSELGY 7
KLSE+GY
Sbjct: 31 KLSEIGY 37


>sp|YL107_MIMIV|PUTATIVE BTB/POZ domain-containing protein L107|Acanthamoeba polyphaga

Query: 2 LSELGYQLI 10
LSE+ YQL+
Sbjct: 89 LSEVDYQLL 97


>sp|TRM1_TUHV2|TRIPARTITE terminase subunit 1|Tupaiid herpesvirus (strain 2) (TuHV-2)

Query: 1 KLSELGYQLI 10
K+SELGY +
Sbjct: 481 KVSELGYNRV 490


>sp|TRM1_MUHVS|TRIPARTITE terminase subunit 1|Murid herpesvirus 1 (strain Smith)

Query: 1 KLSELGYQLI 10
K+SE+GY +
Sbjct: 489 KVSEMGYNKV 498




97|SequenceR|490|481|YSTKRKLSEL

>sp|YL281_MIMIV|PUTATIVE FNIP repeat-containing protein L281|Acanthamoeba polyphaga

Query: 2 STKRKLSEL 10
S KRKLSE+
Sbjct: 134 SFKRKLSEI 142




98|SequenceR|495|486|MVQVIYSTKR

***** No hits found ******


99|SequenceR|500|491|ASTSAMVQVI

***** No hits found ******


100|SequenceR|505|496|GNTGGASTSA

>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 GNTGGASTS 9
G+TGG+S+S
Sbjct: 521 GDTGGSSSS 529


>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 GNTGGASTS 9
G+TGG+S+S
Sbjct: 521 GDTGGSSSS 529


>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)

Query: 1 GNTGGAS 7
GN GGAS
Sbjct: 280 GNDGGAS 286


>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 GNTGGAS 7
GN GGAS
Sbjct: 280 GNDGGAS 286


>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)

Query: 1 GNTGGAS 7
GN GGAS
Sbjct: 280 GNDGGAS 286


>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)

Query: 2 NTGGASTS 9
NTG ASTS
Sbjct: 387 NTGKASTS 394




101|SequenceR|510|501|FNISTGNTGG

>sp|PORTL_PSHV1|PORTAL protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 3 ISTGNTGG 10
+STGN GG
Sbjct: 36 LSTGNDGG 43


>sp|VG27_BPML5|MINOR tail protein Gp27|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 FNISTGNTG 9
FN++TG+ G
Sbjct: 17 FNLTTGDQG 25


>sp|VG27_BPMD2|MINOR tail protein Gp27|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 FNISTGNTG 9
FN++TG+ G
Sbjct: 17 FNLTTGDQG 25


>sp|SPIKE_CVCAK|SPIKE glycoprotein|Canine coronavirus (strain K378) (CCoV)

Query: 1 FNISTGNTGG 10
FN++TG++G
Sbjct: 452 FNLTTGDSGA 461


>sp|DEPOL_BPK51|DEPOLYMERASE, capsule KL64-specific|Klebsiella phage P510 (Bacteriophage P510)

Query: 1 FNISTGNTGG 10
FN++ GNT G
Sbjct: 935 FNVARGNTLG 944


>sp|Y286A_AFV2P|UNCHARACTERIZED protein ORF286a|Acidianus filamentous virus 2 (isolate

Query: 1 FNISTGNTG 9
FN+S+G++G
Sbjct: 135 FNVSSGSSG 143




102|SequenceR|515|506|FSLTKFNIST

>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)

Query: 3 LTKFNIST 10
L KFN+ST
Sbjct: 2347 LKKFNLST 2354


>sp|Y060_OSHVF|UNCHARACTERIZED protein ORF60|Ostreid herpesvirus 1 (isolate France)

Query: 1 FSLTKFNIS 9
LTK+NIS
Sbjct: 258 LPLTKYNIS 266


>sp|YL684_MIMIV|UNCHARACTERIZED protein L684|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 LTKFNIST 10
LTK+NI+T
Sbjct: 351 LTKYNINT 358


>sp|GH_MEHV1|ENVELOPE glycoprotein H|Meleagrid herpesvirus 1 (MeHV-1) (Turkey

Query: 3 LTKFNIST 10
L +FNIST
Sbjct: 40 LVRFNIST 47




103|SequenceR|520|511|IEFVSFSLTK

>sp|POL_SFVCP|PRO-POL polyprotein|Simian foamy virus (isolate chimpanzee)

Query: 1 IEFVSFSLTK 10
+EF+ F++TK
Sbjct: 356 VEFLGFNITK 365


>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1

Query: 1 IEFVSFSLTK 10
+EF+ F++TK
Sbjct: 356 VEFLGFNITK 365


>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1 IEFVSFSLTK 10
+EF+ F++TK
Sbjct: 356 VEFLGFNITK 365


>sp|NSP2_ROTHC|NON-STRUCTURAL protein 2|Rotavirus C (isolate RVC/Human/United

Query: 3 FVSFSLTK 10
FVSFSLT+
Sbjct: 7 FVSFSLTE 14


>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3

Query: 1 IEFVSFSLTK 10
+EF+ F++TK
Sbjct: 356 VEFLGFNITK 365


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 2 EFVSFSLT 9
++VSFSLT
Sbjct: 2327 QYVSFSLT 2334


>sp|NSP2_ROTPC|NON-STRUCTURAL protein 2|Rotavirus C (strain RVC/Pig/United States/Cowden/1980)

Query: 3 FVSFSLTK 10
FVSFSLT+
Sbjct: 7 FVSFSLTE 14


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 2 EFVSFSLT 9
+++SFSLT
Sbjct: 2329 QYISFSLT 2336




104|SequenceR|525|516|STILIIEFVS

***** No hits found ******


105|SequenceR|530|521|GGGILSTILI

>sp|NCAP_LATVB|NUCLEOPROTEIN mammarenavirus (isolate Rat/Bolivia/MARU 1924/1965)

Query: 1 GGGILSTILI 10
GG +L TIL+
Sbjct: 255 GGNMLETILV 264




106|SequenceR|535|526|ILILLGGGIL

>sp|ENV_MLVHO|ENVELOPE glycoprotein|Hortulanus murine leukemia virus (HoMuLV)

Query: 1 ILILLGGGI 9
ILI+LGG +
Sbjct: 24 ILIMLGGAL 32


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 2 LILLGGGI 9
+++LGGG+
Sbjct: 115 MVILGGGV 122


>sp|NS1_BANNV|NON-STRUCTURAL protein 1|Banna virus (BAV)

Query: 1 ILILLGGGI 9
ILIL GG I
Sbjct: 68 ILILAGGSI 76


>sp|VP09_BPAPS|PUTATIVE protein p9|Acyrthosiphon pisum secondary endosymbiont phage

Query: 1 ILILLGGGIL 10
++++LGGG++
Sbjct: 12 LVLVLGGGMI 21




107|SequenceR|540|531|AVTLIILILL

>sp|GL18B_MDBVW|MUCIN-LIKE protein Glc1.8b|Microplitis demolitor bracovirus (isolate Webb)

Query: 2 VTLIILIL 9
+TLIIL+L
Sbjct: 4 ITLIILVL 11


>sp|VGE3_EHV2|SUSHI domain-containing protein E3|Equine herpesvirus 2 (strain 86/87)

Query: 2 VTLIILILL 10
+TL+++ILL
Sbjct: 153 ITLVVIILL 161




108|SequenceR|545|536|KKLGYAVTLI

>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41

Query: 1 KKLGYAVTLI 10
KKLG VTL+
Sbjct: 114 KKLGQPVTLM 123


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 1 KKLGYAVT 8
K +GYAVT
Sbjct: 297 KPIGYAVT 304


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 1 KKLGYAVT 8
K +GYAVT
Sbjct: 300 KTVGYAVT 307


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 1 KKLGYAVT 8
K +GYAVT
Sbjct: 297 KTVGYAVT 304


>sp|PRXH_BPMD2|PUTATIVE non-heme haloperoxidase|Mycobacterium phage D29 (Mycobacteriophage

Query: 1 KKLGYAVTLI 10
KKLG AVT I
Sbjct: 146 KKLGEAVTDI 155




109|SequenceR|550|541|TLKNPKKLGY

>sp|DPOL_BPPZA|DNA polymerase|Bacillus phage PZA (Bacteriophage PZA)

Query: 4 NPKKLGY 10
+PKKLGY
Sbjct: 473 DPKKLGY 479


>sp|DPOL_BPPH2|DNA polymerase|Bacillus phage phi29 (Bacteriophage phi-29)

Query: 4 NPKKLGY 10
+PKKLGY
Sbjct: 476 DPKKLGY 482


>sp|DPOL_BPNF|DNA polymerase|Bacillus phage Nf (Bacteriophage Nf)

Query: 4 NPKKLGY 10
+PKKLGY
Sbjct: 473 DPKKLGY 479


>sp|DPOL_BPM2|DNA polymerase|Bacillus phage M2 (Bacteriophage M2)

Query: 4 NPKKLGY 10
+PKKLGY
Sbjct: 473 DPKKLGY 479


>sp|DPOL_BPB03|DNA polymerase|Bacillus phage B103 (Bacteriophage B103)

Query: 4 NPKKLGY 10
+PKKLGY
Sbjct: 473 DPKKLGY 479


>sp|MB43_GAHVM|MEMBRANE protein UL43 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 TLKNPKKLG 9
TL++P +LG
Sbjct: 243 TLRHPSRLG 251


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 3 KNPKKLG 9
+NP+KLG
Sbjct: 1953 RNPEKLG 1959


>sp|PHOSP_DUVV|PHOSPHOPROTEIN virus (DUVV)

Query: 2 LKNPKKLG 9
L NP+KLG
Sbjct: 278 LVNPEKLG 285


>sp|TMP_BPN15|TAPE measure protein|Escherichia phage N15 (Bacteriophage N15)

Query: 1 TLKNPKK 7
TLK PKK
Sbjct: 451 TLKKPKK 457


>sp|YR627_MIMIV|UNCHARACTERIZED protein R627|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 LKNPKKLG 9
+KNPKKL
Sbjct: 536 IKNPKKLS 543


>sp|RDRP_SSDRV|RNA replication protein|Sclerotinia sclerotiorum debilitation-associated

Query: 2 LKNPKKL 8
+KNP+KL
Sbjct: 1513 IKNPRKL 1519


>sp|NEC2_PSHV1|NUCLEAR egress protein 2|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 TLKNPKKLGY 10
TLK+ K LG+
Sbjct: 246 TLKHKKNLGW 255


>sp|CAPSD_FDVS|INNER capsid protein S2|Fiji disease virus (isolate Sugarcane)

Query: 5 PKKLGY 10
P+KLGY
Sbjct: 740 PRKLGY 745


>sp|RDRP_IBDVA|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus

Query: 3 KNPKKLGY 10
K+P KLGY
Sbjct: 189 KDPLKLGY 196


>sp|RDRP_IBDVB|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus

Query: 3 KNPKKLGY 10
K+P KLGY
Sbjct: 190 KDPLKLGY 197


>sp|RDRP_IBDV|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus

Query: 3 KNPKKLGY 10
K+P KLGY
Sbjct: 190 KDPLKLGY 197


>sp|RDRP_IBDVU|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus

Query: 3 KNPKKLGY 10
K+P KLGY
Sbjct: 190 KDPLKLGY 197




110|SequenceR|555|546|PWCLHTLKNP

>sp|G1P_BPIKE|GENE 1 protein|Salmonella phage IKe (Bacteriophage IKe)

Query: 2 WCLHTLK 8
WCLH K
Sbjct: 110 WCLHARK 116


>sp|IAP1_NPVOP|APOPTOSIS inhibitor 1|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 1 PWCLHTLKNP 10
PW H L NP
Sbjct: 179 PWQRHALANP 188


>sp|DPOL_ADEB2|DNA polymerase|Bovine adenovirus 2 (BAdV-2) (Mastadenovirus

Query: 3 CLHTLKN 9
CLHTL+N
Sbjct: 770 CLHTLEN 776


>sp|VG49_SHV21|UNCHARACTERIZED gene 49 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 2 WCLHTL 7
WCLH L
Sbjct: 149 WCLHNL 154


>sp|CAPSD_PCV87|CAPSID protein|Peanut clump virus (isolate 87/TGTA2)

Query: 1 PWCLHTLKN 9
PW H +KN
Sbjct: 18 PWRQHIIKN 26


>sp|L_MPV15|RNA-DIRECTED RNA polymerase L|Murine pneumonia virus (strain 15)

Query: 1 PWCLHTLKNP 10
PW ++ +NP
Sbjct: 1563 PWVVNVTRNP 1572


>sp|VP6_MPRVN|UNCHARACTERIZED protein VP6|Micromonas pusilla reovirus (isolate Netherlands/2005)

Query: 2 WCLHTLK 8
WC H L+
Sbjct: 481 WCEHVLR 487


>sp|DPOL_ADECC|DNA polymerase|Canine adenovirus serotype 1 (strain

Query: 2 WCLHTLK 8
+CLHTL+
Sbjct: 901 FCLHTLE 907


>sp|DPOL_ADECT|DNA polymerase|Canine adenovirus serotype 2 (strain

Query: 2 WCLHTLK 8
+CLHTL+
Sbjct: 902 FCLHTLE 908


>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 WCLH 5
WCLH
Sbjct: 86 WCLH 89


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 WCLH 5
WCLH
Sbjct: 86 WCLH 89


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 WCLH 5
WCLH
Sbjct: 86 WCLH 89


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 WCLH 5
WCLH
Sbjct: 86 WCLH 89


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 WCLH 5
WCLH
Sbjct: 86 WCLH 89




111|SequenceR|560|551|PNPVTPWCLH

>sp|G1P_BPIKE|GENE 1 protein|Salmonella phage IKe (Bacteriophage IKe)

Query: 3 PVTPWCLH 10
PV WCLH
Sbjct: 106 PVIDWCLH 113


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 6 PWCLH 10
PWCLH
Sbjct: 2168 PWCLH 2172


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 6 PWCLH 10
PWCLH
Sbjct: 2082 PWCLH 2086


>sp|PIN_BPT4|HOST protease inhibitor|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 PVTPWCL 9
P+T WCL
Sbjct: 66 PITYWCL 72


>sp|DEPOL_BPK51|DEPOLYMERASE, capsule KL64-specific|Klebsiella phage P510 (Bacteriophage P510)

Query: 2 NPVTPW 7
+PVTPW
Sbjct: 680 SPVTPW 685


>sp|CAPSD_FDVS|INNER capsid protein S2|Fiji disease virus (isolate Sugarcane)

Query: 2 NPVTPWC 8
+PVTP+C
Sbjct: 300 HPVTPFC 306


>sp|TERL_BPSF5|PUTATIVE terminase large subunit|Shigella phage SfV (Shigella flexneri

Query: 2 NPVTPWCL 9
NP+ WC+
Sbjct: 510 NPIMTWCI 517


>sp|RDRP_GVAIS|RNA replication protein|Grapevine virus A (isolate Is

Query: 3 PVTPWCL 9
PV PW L
Sbjct: 237 PVNPWLL 243


>sp|MREP_MDV1|MASTER replication protein|Milk vetch dwarf virus (isolate

Query: 2 NPVTPWCLH 10
NP++P LH
Sbjct: 14 NPLSPLSLH 22


>sp|MREP_FBNY2|MASTER replication protein|Faba bean necrotic yellows virus

Query: 2 NPVTPWCLH 10
NP++P LH
Sbjct: 14 NPLSPLSLH 22


>sp|MREP_FBNY1|MASTER replication protein|Faba bean necrotic yellows virus

Query: 2 NPVTPWCLH 10
NP++P LH
Sbjct: 14 NPLSPLSLH 22


>sp|C_RINDR|PROTEIN C|Rinderpest virus (strain RBOK) (RDV)

Query: 1 PNPVTPWCL 9
P+P TPW L
Sbjct: 14 PDPSTPWSL 22


>sp|C_RINDK|PROTEIN C|Rinderpest virus (strain Kabete O)

Query: 1 PNPVTPWCL 9
P+P TPW L
Sbjct: 14 PDPSTPWSL 22


>sp|VF213_IIV3|UNCHARACTERIZED protein 051L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 PNPVTPWCL 9
P TPWC+
Sbjct: 46 PGSTTPWCV 54


>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 PVTPWCLH 10
PVT WC H
Sbjct: 3180 PVTIWCGH 3187


>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 PVTPWCLH 10
PVT WC H
Sbjct: 3179 PVTIWCGH 3186


>sp|POLG_PWVTB|GENOME polyprotein|Passionfruit woodiness virus (strain Tip

Query: 2 NPVTPWCL 9
NP WC+
Sbjct: 114 NPFMVWCI 121


>sp|POLG_PWVSE|GENOME polyprotein|Passionfruit woodiness virus (strain Severe)

Query: 2 NPVTPWCL 9
NP WC+
Sbjct: 114 NPFMVWCI 121


>sp|POLG_PWVMI|GENOME polyprotein|Passionfruit woodiness virus (strain Mild)

Query: 2 NPVTPWCL 9
NP WC+
Sbjct: 114 NPFMVWCI 121


>sp|RDRP_OUMVV|RNA-DEPENDENT RNA polymerase|Ourmia melon virus (isolate Melon/Iran/VE9)

Query: 2 NPVTPW 7
+PV+PW
Sbjct: 440 DPVSPW 445


>sp|VP22_HHV11|TEGUMENT protein VP22|Human herpesvirus 1 (strain 17)

Query: 1 PNPVTPW 7
PNP PW
Sbjct: 183 PNPDAPW 189


>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1 PNPVTPWC 8
P P WC
Sbjct: 34 PTPTRDWC 41


>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas)

Query: 1 PNPVTPWC 8
P P WC
Sbjct: 34 PTPTRDWC 41


>sp|11011_ASFWA|PROTEIN MGF 110-11L|African swine fever virus (isolate

Query: 2 NPVTPWCLH 10
+P T WC +
Sbjct: 21 SPATQWCFY 29


>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United

Query: 2 NPVTPWCLH 10
NP+ PW ++
Sbjct: 50 NPIDPWIIN 58


>sp|VEF_GVHA|VIRAL-ENHANCING factor|Heliothis armigera granulosis virus (HaGV)

Query: 2 NPVTPW 7
NPVTP+
Sbjct: 349 NPVTPY 354


>sp|GP_PHV|ENVELOPMENT polyprotein|Prospect Hill virus (PHV)

Query: 1 PNPVTPWCLH 10
PN + P+C++
Sbjct: 572 PNGMCPYCMN 581




112|SequenceR|565|556|ISSEAPNPVT

>sp|CATV_GVXN|VIRAL cathepsin|Xestia c-nigrum granulosis virus (XnGV)

Query: 1 ISSEAPNPVT 10
IS EAP P T
Sbjct: 213 ISYEAPYPYT 222




113|SequenceR|570|561|GHWTAISSEA

>sp|KTHY_ECTVM|THYMIDYLATE kinase|Ectromelia virus (strain Moscow) (ECTV)

Query: 2 HWTAISSE 9
HW ISSE
Sbjct: 167 HWQIISSE 174


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1 GHWTAISSEA 10
G W+ +SSEA
Sbjct: 2403 GSWSTVSSEA 2412


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 GHWTAISSEA 10
G W+ +SSEA
Sbjct: 2403 GSWSTVSSEA 2412


>sp|KTHY_CAMPS|THYMIDYLATE kinase|Camelpox virus (strain CMS)

Query: 2 HWTAISSE 9
HW ISSE
Sbjct: 167 HWQIISSE 174


>sp|KTHY_CAMPM|THYMIDYLATE kinase|Camelpox virus (strain M-96)

Query: 2 HWTAISSE 9
HW ISSE
Sbjct: 167 HWQIISSE 174


>sp|KTHY_MONPV|THYMIDYLATE kinase|Monkeypox virus (MPXV)

Query: 2 HWTAISSE 9
HW ISSE
Sbjct: 167 HWQIISSE 174


>sp|KTHY_CWPXG|THYMIDYLATE kinase|Cowpox virus (strain GRI-90 /

Query: 2 HWTAISSE 9
HW ISSE
Sbjct: 167 HWQIISSE 174


>sp|KTHY_VARV|THYMIDYLATE kinase|Variola virus

Query: 2 HWTAISSE 9
HW ISSE
Sbjct: 168 HWQIISSE 175


>sp|KTHY_VAR67|THYMIDYLATE kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2 HWTAISSE 9
HW ISSE
Sbjct: 168 HWQIISSE 175


>sp|KTHY_VACCW|THYMIDYLATE kinase|Vaccinia virus (strain Western Reserve)

Query: 2 HWTAISSE 9
HW ISSE
Sbjct: 167 HWQIISSE 174


>sp|KTHY_VACCT|THYMIDYLATE kinase|Vaccinia virus (strain Tian Tan)

Query: 2 HWTAISSE 9
HW ISSE
Sbjct: 167 HWQIISSE 174


>sp|KTHY_VACCC|THYMIDYLATE kinase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 HWTAISSE 9
HW ISSE
Sbjct: 167 HWQIISSE 174


>sp|KTHY_VACCA|THYMIDYLATE kinase|Vaccinia virus (strain Ankara) (VACV)

Query: 2 HWTAISSE 9
HW ISSE
Sbjct: 167 HWQIISSE 174


>sp|KTHY_RABPU|THYMIDYLATE kinase|Rabbitpox virus (strain Utrecht) (RPV)

Query: 2 HWTAISSE 9
HW ISSE
Sbjct: 167 HWQIISSE 174


>sp|KTHY_CWPXB|THYMIDYLATE kinase|Cowpox virus (strain Brighton Red)

Query: 2 HWTAISSE 9
HW ISSE
Sbjct: 167 HWQIISSE 174


>sp|CAPSD_TOBSV|CAPSID protein|Tobacco streak virus (strain WC)

Query: 1 GHWTAISSEA 10
G+W AIS A
Sbjct: 215 GYWIAISKPA 224


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 GHWTAISSE 9
GH+TA++ E
Sbjct: 6309 GHFTAVAGE 6317


>sp|V239_FOWPN|PUTATIVE C-type lectin protein FPV239|Fowlpox virus (strain NVSL) (FPV)

Query: 1 GHWTAISSE 9
GH T+ISS+
Sbjct: 81 GHLTSISSK 89


>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 3 WTAISS 8
WTA+SS
Sbjct: 102 WTAVSS 107




114|SequenceR|575|566|DKFDDGHWTA

>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 6 GHWTA 10
GHWTA
Sbjct: 1981 GHWTA 1985


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 6 GHWTA 10
GHWTA
Sbjct: 1981 GHWTA 1985


>sp|ENV_BLVJ|ENVELOPE glycoprotein|Bovine leukemia virus (isolate Japanese

Query: 1 DKFDDGHW 8
D+FD HW
Sbjct: 120 DRFDCPHW 127


>sp|ENV_BLVAV|ENVELOPE glycoprotein|Bovine leukemia virus (isolate American

Query: 1 DKFDDGHW 8
D+FD HW
Sbjct: 120 DRFDCPHW 127


>sp|ENV_BLVAF|ENVELOPE glycoprotein|Bovine leukemia virus (isolate American

Query: 1 DKFDDGHW 8
D+FD HW
Sbjct: 120 DRFDCPHW 127


>sp|ENV_BLVAU|ENVELOPE glycoprotein|Bovine leukemia virus (isolate Australian)

Query: 1 DKFDDGHW 8
D+FD HW
Sbjct: 120 DRFDCPHW 127


>sp|POL1_CRLVP|RNA1 polyprotein|Cherry rasp leaf virus (isolate

Query: 3 FDDGHWT 9
F DG WT
Sbjct: 573 FKDGFWT 579


>sp|M22_HRSVB|PROTEIN M2-2|Human respiratory syncytial virus B

Query: 3 FDDGHWT 9
FD+ HWT
Sbjct: 55 FDEIHWT 61


>sp|TMP_BPLC2|PROBABLE tape measure protein|Lactococcus phage c2

Query: 1 DKFDDGHW 8
D F D HW
Sbjct: 593 DAFSDFHW 600


>sp|GAG_FFV|GAG polyprotein|Feline foamy virus (FFV) (Feline

Query: 2 KFDDGHWT 9
+F DG+W+
Sbjct: 284 QFTDGNWS 291


>sp|NS1_INBMD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Maryland/1959)

Query: 1 DKFDDGH 7
++FD+GH
Sbjct: 245 ERFDEGH 251


>sp|NS1_INBRU|NON-STRUCTURAL protein 1|Influenza B virus (strain B/RU/1969)

Query: 1 DKFDDGH 7
++FD+GH
Sbjct: 245 ERFDEGH 251


>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7

Query: 4 DDGHWT 9
+D HWT
Sbjct: 517 EDSHWT 522


>sp|BXD_CBDP|BOTULINUM neurotoxin type D|Clostridium botulinum D phage (Clostridium

Query: 1 DKFDDGHW 8
+KF++G W
Sbjct: 139 EKFENGSW 146


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 5 DGHWTA 10
D HWTA
Sbjct: 2045 DVHWTA 2050


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 5 DGHWTA 10
D HWTA
Sbjct: 2047 DVHWTA 2052


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 5 DGHWTA 10
D HWTA
Sbjct: 2048 DVHWTA 2053


>sp|NS1_INBGL|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GL/1954)

Query: 1 DKFDDGH 7
++FD+GH
Sbjct: 245 ERFDEGH 251


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 5 DGHWTA 10
D HWTA
Sbjct: 2047 DVHWTA 2052


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)

Query: 5 DGHWTA 10
D HWTA
Sbjct: 2047 DVHWTA 2052


>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17

Query: 5 DGHWT 9
DGHW+
Sbjct: 396 DGHWS 400


>sp|ENV_BLV|ENVELOPE glycoprotein|Bovine leukemia virus (BLV)

Query: 1 DKFDDGHW 8
D FD HW
Sbjct: 120 DHFDCPHW 127


>sp|HELIC_BPT4|DNAB-LIKE replicative helicase|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 DKFDDGH 7
D DDGH
Sbjct: 247 DDIDDGH 253


>sp|ENV_BLVB5|ENVELOPE glycoprotein|Bovine leukemia virus (isolate Belgium

Query: 1 DKFDDGHW 8
D FD HW
Sbjct: 120 DHFDCPHW 127


>sp|YR865_MIMIV|UNCHARACTERIZED protein R865|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 KFDDGHW 8
K++DG W
Sbjct: 52 KYEDGKW 58


>sp|PORTL_BPBPP|PROBABLE portal protein|Bordetella phage BPP-1

Query: 1 DKFDDGHW 8
DKFD W
Sbjct: 475 DKFDADRW 482


>sp|NS1_INBLE|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Lee/1940)

Query: 1 DKFDDGH 7
++FD+GH
Sbjct: 245 ERFDEGH 251


>sp|ENV_BLVB2|ENVELOPE glycoprotein|Bovine leukemia virus (isolate Belgium

Query: 1 DKFDDGHW 8
D FD HW
Sbjct: 120 DHFDCPHW 127


>sp|HELI_NPVAC|DNA replication helicase|Autographa californica nuclear polyhedrosis

Query: 2 KFDDGH 7
KFDD H
Sbjct: 221 KFDDSH 226




115|SequenceR|580|571|KLNLKDKFDD

>sp|P2_RDVO|MINOR outer capsid protein P2|Rice dwarf virus (isolate O)

Query: 1 KLNLKDKFDD 10
K+N+K+ FDD
Sbjct: 146 KVNMKNVFDD 155


>sp|RDRP_P1AMV|RNA replication protein|Plantago asiatica mosaic potexvirus (P1AMV)

Query: 1 KLNLKDKFD 9
K L+DKFD
Sbjct: 955 KEELRDKFD 963


>sp|P3_RDVA|OUTER capsid protein P3|Rice dwarf virus (isolate Akita)

Query: 1 KLNLKDKFD 9
K+N++ KFD
Sbjct: 871 KVNMRAKFD 879


>sp|YR424_MIMIV|UNCHARACTERIZED protein R424|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KLNLKDKFDD 10
K++ KDKFD+
Sbjct: 321 KVSTKDKFDE 330


>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67

Query: 1 KLNLKDKF 8
++NLK+KF
Sbjct: 477 EINLKEKF 484


>sp|P2_RDVF|MINOR outer capsid protein P2|Rice dwarf virus (isolate Fujian)

Query: 2 LNLKDKFDD 10
+N+K+ FDD
Sbjct: 147 VNMKNVFDD 155




116|SequenceR|585|576|SDDSEKLNLK

>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 DSEKLNL 9
DSEKLN+
Sbjct: 3567 DSEKLNV 3573


>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 DSEKLNL 9
DSEKLN+
Sbjct: 3565 DSEKLNV 3571


>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 DSEKLNL 9
DSEKLN+
Sbjct: 3565 DSEKLNV 3571


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 DSEKLNL 9
DSEKLN+
Sbjct: 3567 DSEKLNV 3573


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 DSEKLNL 9
DSEKLN+
Sbjct: 3565 DSEKLNV 3571


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 DSEKLNL 9
DSEKLN+
Sbjct: 3565 DSEKLNV 3571




117|SequenceR|590|581|DETNVSDDSE

>sp|PP85_HHV6Z|PHOSPHOPROTEIN 85|Human herpesvirus 6B (strain Z29)

Query: 1 DETNVSDDS 9
DETN+SD S
Sbjct: 524 DETNISDYS 532


>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)

Query: 1 DETNVSDDS 9
+ETNV+D++
Sbjct: 330 EETNVTDNA 338


>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)

Query: 1 DETNVSDDS 9
+ETNV+D++
Sbjct: 330 EETNVTDNA 338


>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 DETNVSDDS 9
DETN+SD S
Sbjct: 524 DETNISDYS 532




118|SequenceR|595|586|PKLIRDETNV

>sp|L_EBLV1|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 1 (strain

Query: 1 PKLIRDETN 9
P+ IRD+TN
Sbjct: 327 PQFIRDKTN 335


>sp|ENV_MLVHO|ENVELOPE glycoprotein|Hortulanus murine leukemia virus (HoMuLV)

Query: 1 PKLIRDETN 9
PK I+D+TN
Sbjct: 7 PKSIKDKTN 15


>sp|BXD_CBDP|BOTULINUM neurotoxin type D|Clostridium botulinum D phage (Clostridium

Query: 2 KLIRDETNV 10
K+I DETNV
Sbjct: 475 KIITDETNV 483


>sp|VP2_BTV1A|OUTER capsid protein VP2|Bluetongue virus 1 (isolate Australia)

Query: 1 PKLIRDE 7
P+LIRDE
Sbjct: 248 PELIRDE 254


>sp|075R_IIV3|UNCHARACTERIZED protein 075R|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 KLIRDETNV 10
K+I DETN+
Sbjct: 19 KVIEDETNL 27




119|SequenceR|600|591|SPTSCPKLIR

>sp|3602L_ASFB7|PROTEIN MGF 360-2L|African swine fever virus (strain

Query: 5 CPKLIR 10
CPK+IR
Sbjct: 351 CPKIIR 356


>sp|ROS_AVISU|TYROSINE-PROTEIN kinase transforming protein ros|UR2 avian sarcoma virus (UR2SV)

Query: 1 SPTSCPKLIR 10
SP +CP IR
Sbjct: 336 SPNNCPDDIR 345


>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 4 SCPKLIR 10
SCPK+I+
Sbjct: 2592 SCPKMIK 2598


>sp|HEMA_ISAV8|HEMAGGLUTININ-ESTERASE salmon anemia virus (isolate

Query: 4 SCPKLIR 10
SCPKL++
Sbjct: 296 SCPKLVK 302


>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 4 SCPKLIR 10
SCPK+I+
Sbjct: 2589 SCPKMIK 2595


>sp|GB_EHV4|ENVELOPE glycoprotein B|Equine herpesvirus 4 (strain 1942)

Query: 2 PTSCPKL 8
P SCPK
Sbjct: 95 PRSCPKF 101


>sp|NS1AB_MASV1|NON-STRUCTURAL polyprotein 1AB|Mink astrovirus 1 (MAstV-1)

Query: 2 PTSCPKLI 9
PT C KL+
Sbjct: 1298 PTDCDKLV 1305


>sp|OX2V_HHV6Z|PUTATIVE OX-2 membrane glycoprotein homolog|Human herpesvirus 6B (strain

Query: 1 SPTSCPKLI 9
S TSC KLI
Sbjct: 136 SATSCLKLI 144


>sp|HBSAG_HBVA5|LARGE envelope protein|Hepatitis B virus genotype A1

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 235 SPTSCPPI 242


>sp|HBSAG_HBVA1|LARGE envelope protein|Hepatitis B virus genotype A1

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 235 SPTSCPPI 242


>sp|HBSAG_HBVA7|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 235 SPTSCPPI 242


>sp|HBSAG_HBVA4|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 235 SPTSCPPI 242


>sp|HBSAG_HBVA3|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 235 SPTSCPPI 242


>sp|HBSAG_HBVA6|LARGE envelope protein|Hepatitis B virus genotype A1

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 224 SPTSCPPI 231


>sp|HBSAG_HBVE4|LARGE envelope protein|Hepatitis B virus genotype E

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 234 SPTSCPPI 241


>sp|HBSAG_HBVA8|LARGE envelope protein|Hepatitis B virus genotype A3

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 235 SPTSCPPI 242


>sp|HBSAG_HBVA2|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 224 SPTSCPPI 231


>sp|HBSAG_HBVGB|LARGE envelope protein|Gibbon hepatitis B virus subtype

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 224 SPTSCPPI 231


>sp|HBSAG_HBVE2|LARGE envelope protein|Hepatitis B virus genotype E

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 234 SPTSCPPI 241


>sp|HBSAG_HBVE1|LARGE envelope protein|Hepatitis B virus genotype E

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 234 SPTSCPPI 241


>sp|HBSAG_HBVOR|LARGE envelope protein|Orangutan hepatitis B virus (isolate

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 224 SPTSCPPI 231


>sp|HBSAG_HBVGO|LARGE envelope protein|Gorilla hepatitis B virus (isolate

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 224 SPTSCPPI 231


>sp|HBSAG_HBVC8|LARGE envelope protein|Hepatitis B virus genotype C

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 224 SPTSCPPI 231


>sp|HBSAG_HBVC5|LARGE envelope protein|Hepatitis B virus genotype C

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 235 SPTSCPPI 242


>sp|HBSAG_HBVC3|LARGE envelope protein|Hepatitis B virus genotype C

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 235 SPTSCPPI 242


>sp|HBSAG_HBVA9|LARGE envelope protein|Hepatitis B virus genotype A3

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 235 SPTSCPPI 242


>sp|HBSAG_HBVC2|LARGE envelope protein|Hepatitis B virus genotype C

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 235 SPTSCPPI 242


>sp|HBSAG_HBVC1|LARGE envelope protein|Hepatitis B virus genotype C

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 235 SPTSCPPI 242


>sp|HBSAG_HBVCP|LARGE envelope protein|Chimpanzee hepatitis B virus (isolate

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 224 SPTSCPPI 231


>sp|HBSAG_HBVC4|LARGE envelope protein|Hepatitis B virus genotype C

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 235 SPTSCPPI 242


>sp|HBSAG_HBVC0|LARGE envelope protein|Hepatitis B virus genotype C

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 235 SPTSCPPI 242


>sp|HBSAG_HBVC6|SMALL envelope protein|Hepatitis B virus genotype C

Query: 1 SPTSCPKL 8
SPTSCP +
Sbjct: 61 SPTSCPPI 68


>sp|HBSAG_HBVD6|LARGE envelope protein|Hepatitis B virus genotype D

Query: 1 SPTSCP 6
SPTSCP
Sbjct: 224 SPTSCP 229


>sp|HBSAG_HBVD4|LARGE envelope protein|Hepatitis B virus genotype D

Query: 1 SPTSCP 6
SPTSCP
Sbjct: 224 SPTSCP 229


>sp|HBSAG_HBVC9|LARGE envelope protein|Hepatitis B virus genotype C

Query: 1 SPTSCP 6
SPTSCP
Sbjct: 235 SPTSCP 240


>sp|HBSAG_HBVD3|LARGE envelope protein|Hepatitis B virus genotype D

Query: 1 SPTSCP 6
SPTSCP
Sbjct: 224 SPTSCP 229


>sp|HBSAG_HBVD7|LARGE envelope protein|Hepatitis B virus genotype D

Query: 1 SPTSCP 6
SPTSCP
Sbjct: 224 SPTSCP 229




120|SequenceR|605|596|IVLKDSPTSC

>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate

Query: 2 VLKDSPTSC 10
V +D PTSC
Sbjct: 77 VFEDHPTSC 85


>sp|SCAF_BPT3|CAPSID assembly scaffolding protein|Enterobacteria phage T3

Query: 1 IVLKDSPTS 9
IVL D PTS
Sbjct: 45 IVLSDEPTS 53


>sp|RDRP_GVAIS|RNA replication protein|Grapevine virus A (isolate Is

Query: 3 LKDSPTSC 10
LKD PT C
Sbjct: 1084 LKDEPTIC 1091


>sp|EA59_LAMBD|PROTEIN ea59|Escherichia phage lambda (Bacteriophage lambda)

Query: 1 IVLKDSPTSC 10
+VL++ P SC
Sbjct: 428 VVLQEVPKSC 437


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 1 IVLKDSPTSC 10
IV D+PT C
Sbjct: 531 IVPPDTPTDC 540


>sp|ORF4B_BCHK5|NON-STRUCTURAL protein ORF4b|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 IVLKDSPTSC 10
I++ D PT C
Sbjct: 56 IIMCDKPTHC 65


>sp|POL_MMTVC|GAG-PRO-POL polyprotein|Mouse mammary tumor virus (strain

Query: 3 LKDSPTSC 10
+K+SPT C
Sbjct: 1013 MKNSPTLC 1020


>sp|POL_MMTVB|GAG-PRO-POL polyprotein|Mouse mammary tumor virus (strain

Query: 3 LKDSPTSC 10
+K+SPT C
Sbjct: 1013 MKNSPTLC 1020


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 1 IVLKDSPTSC 10
IVL ++P SC
Sbjct: 1554 IVLPNTPLSC 1563




121|SequenceR|610|601|VVLKDIVLKD

>sp|NS1_JDNVP|INITIATOR protein NS1|Junonia coenia densovirus (isolate pBRJ/1990)

Query: 1 VVLKDIVLKD 10
++L+DI L+D
Sbjct: 99 IILRDIQLRD 108


>sp|NS1_DSDNV|INITIATOR protein NS1|Diatraea saccharalis densovirus (DsDNV)

Query: 1 VVLKDIVLKD 10
++L+DI L+D
Sbjct: 99 IILRDIQLRD 108


>sp|DPOL1_BPK31|DEPOLYMERASE 1, capsule KN3-specific|Klebsiella phage KN3-1 (Bacteriophage

Query: 1 VVLKDIVLKD 10
+ ++D+VL+D
Sbjct: 395 IYMRDVVLRD 404




122|SequenceR|615|606|VNGFNVVLKD

>sp|SCAF_BPP22|SCAFFOLDING protein|Salmonella phage P22 (Bacteriophage P22)

Query: 3 GFNVVLKD 10
GF +VLKD
Sbjct: 41 GFEIVLKD 48


>sp|YL269_MIMIV|UNCHARACTERIZED protein L269|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 VNGFNVVLK 9
VNGFN V+K
Sbjct: 32 VNGFNYVVK 40


>sp|DDA_BPT4|ATP-DEPENDENT DNA helicase dda|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 NGFNVVLK 9
N FN+V+K
Sbjct: 12 NAFNIVMK 19


>sp|GL_SHV21|ENVELOPE glycoprotein L|Saimiriine herpesvirus 2 (strain 11)

Query: 2 NGFNVV 7
NGFNV+
Sbjct: 78 NGFNVI 83




123|SequenceR|620|611|FIEQLVNGFN

>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 FIEQLVNGF 9
F E+L NGF
Sbjct: 253 FFEELPNGF 261


>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 FIEQLVNGF 9
F E+L NGF
Sbjct: 253 FFEELPNGF 261


>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 FIEQLVNGF 9
F E+L NGF
Sbjct: 253 FFEELPNGF 261


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 FIEQLVNGF 9
F E+L NGF
Sbjct: 253 FFEELPNGF 261


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 FIEQLVNGF 9
F E+L NGF
Sbjct: 253 FFEELPNGF 261


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 FIEQLVNGF 9
F E+L NGF
Sbjct: 253 FFEELPNGF 261


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 1 FIEQLVNGF 9
++ +LVNGF
Sbjct: 405 YVTRLVNGF 413


>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)

Query: 2 IEQLVNGFN 10
IE L+NG N
Sbjct: 251 IEDLMNGMN 259


>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)

Query: 2 IEQLVNGFN 10
IE L+NG N
Sbjct: 251 IEDLMNGMN 259


>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 IEQLVNGFN 10
IE L+NG N
Sbjct: 251 IEDLMNGMN 259


>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 4 QLVNGF 9
QLVNGF
Sbjct: 739 QLVNGF 744


>sp|VF436_IIV3|UNCHARACTERIZED protein 060L|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 IEQLVNGFN 10
+EQ+VN +N
Sbjct: 9 VEQIVNKYN 17




124|SequenceR|625|616|RAEDTFIEQL

>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 1 RAEDTFI 7
RAEDT++
Sbjct: 378 RAEDTYV 384


>sp|L_TAMVU|RNA-DIRECTED RNA polymerase L|Tamiami mammarenavirus (isolate Rat/United

Query: 3 EDTFIEQ 9
EDT++EQ
Sbjct: 22 EDTYVEQ 28


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 AEDTFIEQL 10
A+DT IE+L
Sbjct: 526 ADDTVIEEL 534


>sp|A132_SSV1|UNCHARACTERIZED protein A-132|Sulfolobus spindle-shape virus 1 (SSV1)

Query: 1 RAEDTFIEQL 10
+AE+T +EQ+
Sbjct: 2 KAEETIVEQI 11




125|SequenceR|630|621|NEQGTRAEDT

>sp|CYCL_WDSV|RETROVIRAL cyclin|Walleye dermal sarcoma virus (WDSV)

Query: 3 QGTRAEDT 10
+GT AEDT
Sbjct: 277 EGTDAEDT 284




126|SequenceR|635|626|EGGLNNEQGT

>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 4 LNNEQGT 10
+NNEQGT
Sbjct: 1378 INNEQGT 1384


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 4 LNNEQGT 10
+NNEQGT
Sbjct: 1378 INNEQGT 1384


>sp|NEC2_EHV2|NUCLEAR egress protein 2|Equine herpesvirus 2 (strain 86/87)

Query: 1 EGGLNNEQG 9
EGG N+E+G
Sbjct: 198 EGGKNSERG 206


>sp|L_GOGV|RNA-DIRECTED RNA polymerase L|Alethinophid 1 reptarenavirus (isolate

Query: 2 GGLNNEQGT 10
G NN QGT
Sbjct: 996 AGFNNFQGT 1004


>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)

Query: 2 GGLNNEQGT 10
GG++N+Q T
Sbjct: 498 GGISNDQTT 506


>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40

Query: 2 GGLNNEQGT 10
GG+N ++GT
Sbjct: 81 GGINGQRGT 89




127|SequenceR|640|631|VYGNKEGGLN

>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P

Query: 2 YGNKEGGL 9
YGNKEG L
Sbjct: 198 YGNKEGLL 205


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 1 VYGNKEGGLN 10
+YG +EG N
Sbjct: 572 IYGGREGKSN 581


>sp|NS1_DSDNV|INITIATOR protein NS1|Diatraea saccharalis densovirus (DsDNV)

Query: 2 YGNKEGGLN 10
Y N EG LN
Sbjct: 357 YDNLEGSLN 365




128|SequenceR|645|636|RFPCTVYGNK

>sp|VP1_AQRVG|OUTER capsid protein VP1|Aquareovirus G (isolate American grass

Query: 1 RFPCTVYGNK 10
R+P T Y N+
Sbjct: 102 RYPITTYANR 111


>sp|YL688_MIMIV|UNCHARACTERIZED protein L688|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 FPCTVYGN 9
+PC YGN
Sbjct: 28 YPCVTYGN 35


>sp|PG161_VARV|PROTEIN OPG161|Variola virus

Query: 2 FPCTVYGNK 10
F TVYG+K
Sbjct: 14 FSATVYGDK 22


>sp|PG161_VAR67|PROTEIN OPG161|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2 FPCTVYGNK 10
F TVYG+K
Sbjct: 14 FSATVYGDK 22


>sp|PG161_VACCW|PROTEIN OPG161|Vaccinia virus (strain Western Reserve)

Query: 2 FPCTVYGNK 10
F TVYG+K
Sbjct: 14 FSATVYGDK 22


>sp|PG161_VACCC|PROTEIN OPG161|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 FPCTVYGNK 10
F TVYG+K
Sbjct: 14 FSATVYGDK 22


>sp|PG161_MONPV|PROTEIN OPG161|Monkeypox virus (MPXV)

Query: 2 FPCTVYGNK 10
F TVYG+K
Sbjct: 14 FSATVYGDK 22


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 1 RFPCTVY 7
+ PCTVY
Sbjct: 477 KIPCTVY 483


>sp|YO10_ADEG1|PUTATIVE Ig-like domain-containing protein ORF10|Fowl adenovirus A

Query: 2 FPCTVYGNK 10
FP +YGN+
Sbjct: 68 FPMGIYGNE 76


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 1 RFPCTVY 7
+ PCTVY
Sbjct: 477 KIPCTVY 483


>sp|TGB1_ASPVP|MOVEMENT and silencing protein TGBp1|Apple stem pitting virus (isolate

Query: 1 RFPCTVYG 8
+FPC V G
Sbjct: 178 KFPCQVRG 185


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 3 PCTVYGN 9
PC V+GN
Sbjct: 6446 PCEVHGN 6452


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 3 PCTVYGN 9
PC +YG+
Sbjct: 569 PCNIYGD 575


>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)

Query: 1 RFPCTVY 7
+ PCTVY
Sbjct: 477 KIPCTVY 483


>sp|SEMA_ALHV1|SEMAPHORIN-LIKE protein A3|Alcelaphine herpesvirus 1 (strain C500)

Query: 4 CTVYGN 9
C+VYGN
Sbjct: 515 CSVYGN 520


>sp|YO12_ADEG1|UNCHARACTERIZED protein ORF12|Fowl adenovirus A serotype 1

Query: 2 FPCTVYGN 9
FPCT + N
Sbjct: 84 FPCTAHCN 91


>sp|ENV_FIVSD|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain San

Query: 4 CTVYGNK 10
CT+Y NK
Sbjct: 490 CTMYANK 496


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 3 PCTVYGNK 10
PC +YG +
Sbjct: 569 PCNIYGGE 576


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 3 PCTVYGNK 10
PC +YG +
Sbjct: 569 PCHIYGGR 576


>sp|ENV_FIVU1|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain UT-113)

Query: 4 CTVYGNK 10
CT+Y NK
Sbjct: 490 CTMYANK 496


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 3 PCTVYGN 9
PC V+GN
Sbjct: 6355 PCEVHGN 6361


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 3 PCTVYG 8
PC +YG
Sbjct: 570 PCNIYG 575


>sp|ENV_FIVPE|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (isolate Petaluma)

Query: 4 CTVYGNK 10
CT+Y NK
Sbjct: 490 CTMYSNK 496


>sp|YR096_MIMIV|PUTATIVE ankyrin repeat protein R96|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 PCTVYGN 9
PC VY N
Sbjct: 419 PCYVYSN 425


>sp|VE6_HPV26|PROTEIN E6|Human papillomavirus type 26

Query: 1 RFPCTVYG 8
R+ C+VYG
Sbjct: 78 RYTCSVYG 85


>sp|Y14B_BPT4|UNCHARACTERIZED 10.1 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 PCTVYGNK 10
P T+YG K
Sbjct: 30 PITIYGKK 37




129|SequenceR|650|641|LPCDPRFPCT

>sp|TRM1_EHV1V|TRIPARTITE terminase subunit 1|Equine herpesvirus 1 (strain V592)

Query: 3 CDPRFPCT 10
CDP PC+
Sbjct: 185 CDPTHPCS 192


>sp|TRM1_EHV1B|TRIPARTITE terminase subunit 1|Equine herpesvirus 1 (strain Ab4p)

Query: 3 CDPRFPCT 10
CDP PC+
Sbjct: 185 CDPTHPCS 192


>sp|TRM1_EHV1|TRIPARTITE terminase subunit 1|Equine herpesvirus 1 (strain HVS25A)

Query: 3 CDPRFPCT 10
CDP PC+
Sbjct: 185 CDPTHPCS 192


>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV

Query: 1 LPCDPRFP 8
+PC+PR P
Sbjct: 601 VPCEPRSP 608


>sp|GH_EHV4|ENVELOPE glycoprotein H|Equine herpesvirus 4 (strain 1942)

Query: 2 PCDPRFPC 9
P DPR PC
Sbjct: 117 PGDPRGPC 124


>sp|GH_EHV1B|ENVELOPE glycoprotein H|Equine herpesvirus 1 (strain Ab4p)

Query: 2 PCDPRFPC 9
P DPR PC
Sbjct: 110 PGDPRGPC 117


>sp|GH_EHV1|ENVELOPE glycoprotein H|Equine herpesvirus 1 (strain HVS25A)

Query: 2 PCDPRFPC 9
P DPR PC
Sbjct: 110 PGDPRGPC 117


>sp|POL1_CPMVS|RNA1 polyprotein|Cowpea mosaic virus (strain SB)

Query: 1 LPCDPRFP 8
+P DPR P
Sbjct: 1215 VPTDPRIP 1222


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 3 CDPRFPC 9
CD FPC
Sbjct: 815 CDMTFPC 821


>sp|UL01_HCMVM|GLYCOPROTEIN UL1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 CDPRFPC 9
C PRF C
Sbjct: 99 CHPRFTC 105


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 3 CDPRFPC 9
CD FPC
Sbjct: 815 CDMTFPC 821


>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)

Query: 5 PRFPC 9
PRFPC
Sbjct: 418 PRFPC 422


>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15

Query: 2 PCDPRFP 8
PC RFP
Sbjct: 507 PCQIRFP 513


>sp|VR2A_BPT4|PROTEIN rIIA|Enterobacteria phage T4 (Bacteriophage T4)

Query: 4 DPRFPC 9
DPRF C
Sbjct: 74 DPRFVC 79


>sp|POLB_CHPVE|ORFB polyprotein|Cryphonectria hypovirus 1 (strain EP713)

Query: 5 PRFPC 9
PR+PC
Sbjct: 3086 PRYPC 3090


>sp|POLB_CHPVU|ORFB polyprotein|Cryphonectria hypovirus 1 (strain Euro7)

Query: 5 PRFPC 9
PR+PC
Sbjct: 3085 PRYPC 3089


>sp|BP25_BPT4|BASEPLATE wedge protein gp25|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 PCDPRFPC 9
P DP F C
Sbjct: 48 PFDPEFGC 55


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 LPCDP 5
LPCDP
Sbjct: 2164 LPCDP 2168


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 LPCDP 5
LPCDP
Sbjct: 2164 LPCDP 2168


>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)

Query: 2 PCDPRFPCT 10
PC P PC+
Sbjct: 1044 PCSPSVPCS 1052


>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 CDPRFPC 9
CDPR C
Sbjct: 29 CDPRVAC 35


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1 LPCDP 5
LPCDP
Sbjct: 2164 LPCDP 2168


>sp|Y011_NPVOP|UNCHARACTERIZED 37.2 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 2 PCDPRFPC 9
P D R PC
Sbjct: 252 PADERHPC 259


>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)

Query: 1 LPCDPRFP 8
LPC +FP
Sbjct: 15 LPCTGQFP 22




130|SequenceR|655|646|EFSKGLPCDP

>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 1 EFSKGLPCD 9
E SKGL CD
Sbjct: 1119 EMSKGLVCD 1127


>sp|GT048_SIFVH|PUTATIVE glycosyltransferase 48|Sulfolobus islandicus filamentous virus

Query: 1 EFSKGLPCDP 10
E++ G+P DP
Sbjct: 227 EYAVGIPIDP 236


>sp|POL_BIV29|GAG-POL polyprotein|Bovine immunodeficiency virus (strain R29)

Query: 1 EFSKGLPCDP 10
EFS GLP P
Sbjct: 664 EFSTGLPYPP 673


>sp|CAPSD_AQRVG|INNER capsid protein VP3|Aquareovirus G (isolate American grass

Query: 2 FSKGLPCDP 10
FS LP DP
Sbjct: 808 FSAALPVDP 816


>sp|TERS_BPP21|TERMINASE, small subunit|Enterobacteria phage P21 (Bacteriophage 21)

Query: 3 SKGLPC 8
S+GLPC
Sbjct: 24 SQGLPC 29


>sp|RDRP_TRVPP|REPLICASE large subunit|Tobacco rattle virus (isolate PpK20)

Query: 3 SKGLPC 8
SKG PC
Sbjct: 942 SKGFPC 947


>sp|194K_TRVSY|REPLICASE large subunit|Tobacco rattle virus (strain SYM)

Query: 3 SKGLPC 8
SKG PC
Sbjct: 942 SKGFPC 947


>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 KGLPCDP 10
+GL CDP
Sbjct: 285 RGLTCDP 291


>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 4 KGLPCDP 10
+GL CDP
Sbjct: 285 RGLTCDP 291


>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 KGLPCDP 10
+GL CDP
Sbjct: 285 RGLTCDP 291


>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)

Query: 5 GLPCDP 10
G+PC P
Sbjct: 2438 GMPCSP 2443


>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain

Query: 1 EFSKGLP 7
+FSKG+P
Sbjct: 426 DFSKGIP 432


>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)

Query: 1 EFSKGLP 7
+FSKG+P
Sbjct: 426 DFSKGIP 432


>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25

Query: 2 FSKGLPCD 9
+ K LPCD
Sbjct: 169 WDKALPCD 176




131|SequenceR|660|651|SVPLEEFSKG

>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 1 SVPLEEFSKG 10
SVP E++ KG
Sbjct: 399 SVPHEQYKKG 408


>sp|STXA_BP933|SHIGA-LIKE toxin 2 subunit A|Escherichia phage 933W (Bacteriophage 933W)

Query: 1 SVPLEEFSKG 10
S PLE S+G
Sbjct: 47 STPLEHISQG 56


>sp|TERL_BPHK7|TERMINASE, large subunit|Enterobacteria phage HK97 (Bacteriophage HK97)

Query: 1 SVPLEEFSKG 10
S+PL EF +G
Sbjct: 405 SLPLVEFGQG 414


>sp|NSP4_WTV|NON-STRUCTURAL protein 4|Wound tumor virus (WTV)

Query: 1 SVPLEEFSK 9
S+PL+EF K
Sbjct: 622 SLPLQEFLK 630


>sp|L_SVCV|RNA-DIRECTED RNA polymerase L|Spring viremia of carp virus

Query: 3 PLEEFSKG 10
PLE F KG
Sbjct: 1094 PLEMFGKG 1101


>sp|ICP27_SUHVK|MRNA export factor ICP27 homolog|Suid herpesvirus 1 (strain Kaplan)

Query: 2 VPLEEFSKG 10
VPLEE+ G
Sbjct: 307 VPLEEYVPG 315


>sp|VG26_BPMD2|MINOR tail protein Gp26|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 3 PLEEFSKG 10
PL+EF+ G
Sbjct: 285 PLQEFANG 292


>sp|VG26_BPML5|MINOR tail protein Gp26|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 3 PLEEFSKG 10
PL+EF+ G
Sbjct: 286 PLQEFTNG 293




132|SequenceR|665|656|PPIEPSVPLE

>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)

Query: 1 PPIEPSVPLE 10
PP+E + PLE
Sbjct: 1491 PPVEEAEPLE 1500


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 1 PPIEPSVPL 9
PP+EP P+
Sbjct: 1773 PPLEPEAPI 1781


>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40

Query: 1 PPIEPSVPL 9
PP E SVP+
Sbjct: 22 PPSEDSVPI 30


>sp|RDRP_MYRV9|RNA-DIRECTED RNA polymerase VP1|Cryphonectria parasitica mycoreovirus 1

Query: 1 PPIEPSVPLE 10
PP+EP++ L+
Sbjct: 75 PPLEPTLSLQ 84


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 3 IEPSVPLE 10
+EP VP+E
Sbjct: 1312 VEPPVPVE 1319


>sp|LTP_MUHVK|LARGE tegument protein deneddylase|Murid herpesvirus 1 (strain K181)

Query: 1 PPIEPSVP 8
PP+EP P
Sbjct: 1663 PPVEPGSP 1670


>sp|NEF_SIVG1|PROTEIN Nef|Simian immunodeficiency virus agm.grivet (isolate

Query: 2 PIEPSVPL 9
P++P VPL
Sbjct: 85 PVQPRVPL 92


>sp|NCAP_CVHOC|NUCLEOPROTEIN coronavirus OC43 (HCoV-OC43)

Query: 1 PPIEPSVP 8
PPI P VP
Sbjct: 86 PPIAPGVP 93


>sp|Z_CHAVB|RING finger protein Z|Chapare mammarenavirus (isolate

Query: 2 PIEPSVPL 9
P+EPS PL
Sbjct: 88 PVEPSAPL 95


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 1 PPIEPSVPL 9
PP EP P+
Sbjct: 1773 PPSEPEAPI 1781


>sp|Y024_OSHVF|UNCHARACTERIZED protein ORF24|Ostreid herpesvirus 1 (isolate France)

Query: 1 PPIEPSVPL 9
PP+E VP+
Sbjct: 166 PPLENGVPM 174


>sp|GM_BHV1C|ENVELOPE glycoprotein M|Bovine herpesvirus 1.1 (strain Cooper)

Query: 1 PPIEPSVPL 9
PP P++PL
Sbjct: 404 PPRPPTIPL 412


>sp|VL2_HPV04|MINOR capsid protein L2|Human papillomavirus 4

Query: 2 PIEPSVPLE 10
P EP VPLE
Sbjct: 484 PTEPFVPLE 492




133|SequenceR|670|661|YQSKRPPIEP

>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 2 QSKRPPIEP 10
+S RPP EP
Sbjct: 541 ESARPPTEP 549


>sp|NS1_MPV15|NON-STRUCTURAL protein 1|Murine pneumonia virus (strain 15)

Query: 2 QSKRPPIEP 10
Q PPI+P
Sbjct: 94 QETEPPIDP 102


>sp|VF302_IIV3|PUTATIVE zinc finger protein 012R|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 QSKRPPIEP 10
Q R PIEP
Sbjct: 107 QEMREPIEP 115


>sp|YR473_MIMIV|UNCHARACTERIZED protein R473|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YQSKRPPIEP 10
YQ+K P EP
Sbjct: 25 YQNKEPNKEP 34


>sp|DPOL_ADES1|DNA polymerase|Snake adenovirus serotype 1 (SnAdV-1)

Query: 1 YQSKRPPIE 9
YQS+R PI+
Sbjct: 1004 YQSERTPIK 1012


>sp|P2A_CFMVN|POLYPROTEIN P2A|Cocksfoot mottle virus (isolate Dactylis

Query: 2 QSKRPPI 8
+SKRPPI
Sbjct: 499 ESKRPPI 505


>sp|L_IHNVW|RNA-DIRECTED RNA polymerase L|Infectious hematopoietic necrosis virus (strain

Query: 1 YQSKRPPI 8
+++KRPP+
Sbjct: 1066 WRTKRPPV 1073


>sp|L_IHNVO|RNA-DIRECTED RNA polymerase L|Infectious hematopoietic necrosis virus (strain

Query: 1 YQSKRPPI 8
+++KRPP+
Sbjct: 1066 WRTKRPPV 1073




134|SequenceR|675|666|MRSRLYQSKR

***** No hits found ******


135|SequenceR|680|671|RTGEPMRSRL

>sp|REN_TLCVA|REPLICATION enhancer protein|Tomato leaf curl virus (strain

Query: 1 RTGEPMRSR 9
RTGEP+ +R
Sbjct: 4 RTGEPITAR 12


>sp|RNH_MIMIV|PROBABLE ribonuclease H|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 RTGEPMRSR 9
RTGEP+ +R
Sbjct: 110 RTGEPIANR 118


>sp|UL13_PSHV1|SERINE/THREONINE-PROTEIN kinase UL13|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 RTGEPMRSRL 10
RTG+P+R L
Sbjct: 232 RTGDPVRMVL 241




136|SequenceR|685|676|EKAEPRTGEP

>sp|NCAP_PHV|NUCLEOPROTEIN Hill virus (PHV)

Query: 2 KAEPRTGEP 10
KAEPR G+P
Sbjct: 248 KAEPRPGQP 256


>sp|UL13_PSHV1|SERINE/THREONINE-PROTEIN kinase UL13|Psittacid herpesvirus 1 (isolate Amazon

Query: 4 EPRTGEP 10
+PRTG+P
Sbjct: 230 DPRTGDP 236


>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16

Query: 2 KAEPRTGEP 10
++EP TG P
Sbjct: 242 RSEPDTGNP 250


>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)

Query: 2 KAEPRTGE 9
K EP TGE
Sbjct: 422 KVEPHTGE 429


>sp|VG75_EHV2|PROBABLE membrane antigen 75|Equine herpesvirus 2 (strain 86/87)

Query: 4 EPRTGE 9
EPRTGE
Sbjct: 976 EPRTGE 981


>sp|VE8E2_HPV16|PROTEIN E8^E2C|Human papillomavirus type 16

Query: 2 KAEPRTGEP 10
++EP TG P
Sbjct: 54 RSEPDTGNP 62


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 2 KAEPRTGE 9
K EP TGE
Sbjct: 422 KVEPHTGE 429




137|SequenceR|690|681|SFLLQEKAEP

>sp|RDRP_TMVKR|REPLICASE large subunit|Tobacco mosaic virus (strain Korean

Query: 1 SFLLQEKAEP 10
S+LL+EK +P
Sbjct: 1249 SYLLKEKRKP 1258


>sp|RDRP_TBRFV|REPLICASE large subunit|Tomato brown rugose fruit virus

Query: 1 SFLLQEKAEP 10
S+LL+EK +P
Sbjct: 1249 SYLLKEKRKP 1258


>sp|RDRP_TMVRA|REPLICASE large subunit|Tobacco mosaic virus (strain Rakkyo)

Query: 1 SFLLQEKAEP 10
S+LL+EK +P
Sbjct: 1249 SYLLKEKRKP 1258


>sp|RDRP_TMVB|REPLICASE large subunit|Tobacco mosaic virus (strain B935A)

Query: 1 SFLLQEKAEP 10
S+LL+EK +P
Sbjct: 1249 SYLLKEKRKP 1258


>sp|RDRP_TMV|REPLICASE large subunit|Tobacco mosaic virus (strain vulgare)

Query: 1 SFLLQEKAEP 10
S+LL+EK +P
Sbjct: 1249 SYLLKEKRKP 1258


>sp|RDRP_TMVOM|REPLICASE large subunit|Tobacco mosaic virus (strain OM)

Query: 1 SFLLQEKAEP 10
S+LL+EK +P
Sbjct: 1249 SYLLKEKRKP 1258


>sp|RDRP_TOMK1|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh

Query: 1 SFLLQEKAEP 10
S+LL+EK +P
Sbjct: 1249 SYLLKEKRKP 1258


>sp|RDRP_TOML|REPLICASE large subunit|Tomato mosaic virus (strain L)

Query: 1 SFLLQEKAEP 10
S+LL+EK +P
Sbjct: 1249 SYLLKEKRKP 1258


>sp|RDRP_TOMS1|REPLICASE large subunit|Tomato mosaic virus (strain S-1)

Query: 1 SFLLQEKAEP 10
S+LL+EK +P
Sbjct: 1249 SYLLKEKRKP 1258


>sp|RDRP_TOMK2|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh

Query: 1 SFLLQEKAEP 10
S+LL+EK +P
Sbjct: 1249 SYLLKEKRKP 1258


>sp|VPU_JSRV|PROTEIN Vpu|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 1 SFLLQEKAEP 10
+FLLQE +P
Sbjct: 107 AFLLQESHKP 116




138|SequenceR|695|686|VLSQGSFLLQ

>sp|VG34_ICHVA|UNCHARACTERIZED protein ORF34|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 VLSQGSFLL 9
VLS GSFLL
Sbjct: 353 VLSYGSFLL 361




139|SequenceR|700|691|CLHDPVLSQG

>sp|YL788_MIMIV|PUTATIVE BTB/POZ domain-containing protein L788|Acanthamoeba polyphaga

Query: 1 CLHDPVLSQ 9
CLHD +SQ
Sbjct: 175 CLHDHTISQ 183


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 1 CLHDPVLSQ 9
CL+ P LSQ
Sbjct: 1521 CLYKPALSQ 1529


>sp|041R_FRG3G|UNCHARACTERIZED protein 041R|Frog virus 3 (isolate Goorha)

Query: 1 CLHDPVLSQG 10
CLH PV+ +G
Sbjct: 463 CLHMPVILRG 472


>sp|POLG_CILVC|RNA replication protein|Citrus leprosis virus C (isolate

Query: 3 HDPVLS 8
HDPVLS
Sbjct: 2014 HDPVLS 2019


>sp|PAP_PSHV1|DNA polymerase processivity factor|Psittacid herpesvirus 1 (isolate

Query: 1 CLHDPVLS 8
C DPVLS
Sbjct: 134 CAQDPVLS 141


>sp|GD_CHV1|ENVELOPE glycoprotein D|Cercopithecine herpesvirus 1 (CeHV-1) (Simian

Query: 1 CLHDPVLSQG 10
CL PV QG
Sbjct: 227 CLRAPVFEQG 236


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 LHDPVLSQ 9
+HDP L Q
Sbjct: 849 MHDPALRQ 856


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 LHDPVLSQ 9
+HDP L Q
Sbjct: 849 MHDPALRQ 856


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 LHDPVLSQ 9
+HDP L Q
Sbjct: 849 MHDPALRQ 856


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 LHDPVLSQ 9
+HDP L Q
Sbjct: 849 MHDPALRQ 856


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 LHDPVLSQ 9
+HDP L Q
Sbjct: 849 MHDPALRQ 856


>sp|DPOL_SFAVA|DNA polymerase|Spodoptera frugiperda ascovirus 1a (SfAV-1a)

Query: 1 CLHDPV 6
C HDPV
Sbjct: 601 CEHDPV 606


>sp|ICP27_PSHV1|MRNA export factor|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 CLHDPVLS 8
C HDP+ S
Sbjct: 499 CPHDPIFS 506


>sp|L_SV41|RNA-DIRECTED RNA polymerase L|Simian virus 41 (SV41)

Query: 2 LHDPVL 7
LHDPV+
Sbjct: 305 LHDPVI 310


>sp|V236_FOWPN|UNCHARACTERIZED protein FPV236|Fowlpox virus (strain NVSL) (FPV)

Query: 2 LHDPVLS 8
LHDP+++
Sbjct: 81 LHDPIIN 87


>sp|OE56_NPVCF|OCCLUSION-DERIVED virus envelope protein E56|Choristoneura fumiferana nuclear

Query: 1 CLHDPVLS 8
C HDP+++
Sbjct: 225 CNHDPLIA 232




140|SequenceR|705|696|PAGEECLHDP

>sp|MVP_PPVSK|P3N-PIPO polyprotein|Plum pox potyvirus (strain SK

Query: 3 GEECLH 8
GEEC+H
Sbjct: 576 GEECIH 581


>sp|MVP_PPVNA|P3N-PIPO polyprotein|Plum pox potyvirus (isolate NAT)

Query: 3 GEECLH 8
GEEC+H
Sbjct: 576 GEECIH 581


>sp|MVP_PPVD|P3N-PIPO polyprotein|Plum pox potyvirus (strain D)

Query: 3 GEECLH 8
GEEC+H
Sbjct: 577 GEECIH 582


>sp|POLG_RGMVD|GENOME polyprotein|Ryegrass mosaic virus (isolate Denmark/Danish)

Query: 1 PAGEECLHDP 10
PAG EC P
Sbjct: 1323 PAGRECEFKP 1332


>sp|POLG_PPVSK|GENOME polyprotein|Plum pox potyvirus (strain SK

Query: 3 GEECLH 8
GEEC+H
Sbjct: 576 GEECIH 581


>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)

Query: 3 GEECLH 8
GEEC+H
Sbjct: 576 GEECIH 581


>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)

Query: 3 GEECLH 8
GEEC+H
Sbjct: 576 GEECIH 581


>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)

Query: 3 GEECLH 8
GEEC+H
Sbjct: 577 GEECIH 582


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1 PAGEEC 6
P+GEEC
Sbjct: 931 PSGEEC 936


>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain

Query: 1 PAGEECLHDP 10
P G ECL P
Sbjct: 116 PDGSECLPPP 125


>sp|UL92_ELHVK|PROTEIN U63|Elephantid herpesvirus 1 (isolate Asian

Query: 4 EECLHD 9
EECLH+
Sbjct: 2 EECLHN 7


>sp|POLG_SMSV4|GENOME polyprotein|San Miguel sea lion virus

Query: 4 EECLHDP 10
EEC H P
Sbjct: 728 EECTHQP 734


>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1 PAGEECLHDP 10
P G ECL P
Sbjct: 116 PDGSECLPPP 125


>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 1 PAGEECLHDP 10
P G ECL P
Sbjct: 116 PDGSECLPPP 125


>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)

Query: 1 PAGEECLHDP 10
P G ECL P
Sbjct: 116 PDGSECLPPP 125


>sp|POLG_VESVA|GENOME polyprotein|Vesicular exanthema of swine virus

Query: 4 EECLHDP 10
EEC H P
Sbjct: 1394 EECTHQP 1400


>sp|POLG_SMSV1|GENOME polyprotein|San Miguel sea lion virus

Query: 4 EECLHDP 10
EEC H P
Sbjct: 1393 EECTHQP 1399


>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 1 PAGEECLHDP 10
P G ECL P
Sbjct: 116 PDGSECLPPP 125


>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)

Query: 1 PAGEECLHDP 10
P G ECL P
Sbjct: 116 PDGSECLPPP 125


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 4 EECLHD 9
E+C+HD
Sbjct: 1272 EDCIHD 1277


>sp|RDRP_GVAIS|RNA replication protein|Grapevine virus A (isolate Is

Query: 1 PAGEECLH 8
P G EC+H
Sbjct: 464 PYGIECIH 471


>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1 PAGEECLHDP 10
P G ECL P
Sbjct: 116 PDGSECLPPP 125


>sp|POLG_FCVC6|GENOME polyprotein|Feline calicivirus (strain CFI/68 FIV)

Query: 4 EECLHDP 10
EEC H P
Sbjct: 1279 EECSHQP 1285


>sp|POLG_FCV|GENOME polyprotein|Feline calicivirus (FCV)

Query: 4 EECLHDP 10
EEC H P
Sbjct: 1280 EECSHQP 1286


>sp|POLG_FCVF4|GENOME polyprotein|Feline calicivirus (strain Japanese F4)

Query: 4 EECLHDP 10
EEC H P
Sbjct: 1280 EECSHQP 1286


>sp|MCE_WTV|PUTATIVE mRNA-capping enzyme P5|Wound tumor virus (WTV)

Query: 3 GEECLHD 9
GE+ LHD
Sbjct: 126 GEQALHD 132


>sp|POLG_FCVUR|GENOME polyprotein|Feline calicivirus (strain Cat/United States/Urbana/1960)

Query: 4 EECLHDP 10
EEC H P
Sbjct: 1280 EECSHQP 1286


>sp|GAGC_AVISC|P47(GAG-CRK) protein|Avian sarcoma virus CT10 (Avian

Query: 1 PAGEECLHDP 10
P G EC+ P
Sbjct: 109 PPGPECIEKP 118


>sp|POL_ALVA|GAG-POL polyprotein|Avian leukosis virus subgroup A

Query: 1 PAGEECLHDP 10
P G EC+ P
Sbjct: 107 PPGPECIEKP 116


>sp|DPOL_MUHVS|DNA polymerase catalytic subunit|Murid herpesvirus 1 (strain Smith)

Query: 1 PAGEECLHD 9
P G+ CL D
Sbjct: 500 PGGKYCLQD 508


>sp|DPOL_GSHV|PROTEIN P|Ground squirrel hepatitis virus (strain

Query: 1 PAGEECLH 8
P G CLH
Sbjct: 371 PCGTYCLH 378


>sp|GAG_AVISU|CORE protein p19|UR2 avian sarcoma virus (UR2SV)

Query: 1 PAGEECLHDP 10
P G EC+ P
Sbjct: 107 PPGPECIEKP 116


>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain

Query: 1 PAGEEC 6
PAGE C
Sbjct: 296 PAGEHC 301


>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain

Query: 1 PAGEEC 6
PAGE C
Sbjct: 296 PAGEHC 301


>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)

Query: 3 GEECLHDP 10
GEEC DP
Sbjct: 850 GEECPSDP 857




141|SequenceR|710|701|KLYPNPAGEE

>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 1 KLYPNPAGEE 10
KLY P GEE
Sbjct: 6779 KLYSEPIGEE 6788


>sp|L_LNYV3|RNA-DIRECTED RNA polymerase L|Lettuce necrotic yellows virus (isolate

Query: 5 NPAGEE 10
NPAGEE
Sbjct: 1378 NPAGEE 1383


>sp|RDRP_ASPVP|RNA replication polyprotein|Apple stem pitting virus (isolate

Query: 1 KLYPNP 6
KL+PNP
Sbjct: 396 KLFPNP 401


>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)

Query: 1 KLYPNPAGE 9
KL+P+PA E
Sbjct: 249 KLFPDPACE 257


>sp|C_SENDN|PROTEIN C'|Sendai virus (strain Nagoya) (SeV)

Query: 1 KLYPNPAGEE 10
K+Y P GEE
Sbjct: 117 KIYTGPLGEE 126


>sp|C_SENDZ|C' protein|Sendai virus (strain Z) (SeV)

Query: 1 KLYPNPAGEE 10
K+Y P GEE
Sbjct: 117 KIYTGPLGEE 126


>sp|C_SEND6|PROTEIN C'|Sendai virus (strain 6/94) (SeV)

Query: 1 KLYPNPAGEE 10
K+Y P GEE
Sbjct: 117 KIYTGPLGEE 126


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 2 LYPNPAGE 9
+YPN AG+
Sbjct: 1817 MYPNVAGD 1824


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 1 KLYPNPAGEE 10
KL+ P GEE
Sbjct: 6655 KLHSEPIGEE 6664


>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 2 LYPNPAGE 9
+YPN AG+
Sbjct: 1817 MYPNVAGD 1824


>sp|C_SENDH|PROTEIN C'|Sendai virus (strain Harris) (SeV)

Query: 1 KLYPNPAGEE 10
K+Y P GEE
Sbjct: 117 KIYTGPLGEE 126


>sp|C_SENDO|PROTEIN C'|Sendai virus (strain Ohita) (SeV)

Query: 1 KLYPNPAGEE 10
K+Y P GEE
Sbjct: 117 KIYTGPLGEE 126


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 2 LYPNPAGEE 10
+Y NP G E
Sbjct: 1259 IYTNPTGSE 1267


>sp|C_SENDF|PROTEIN C'|Sendai virus (strain Fushimi) (SeV)

Query: 1 KLYPNPAGEE 10
K+Y P GEE
Sbjct: 117 KIYTGPLGEE 126


>sp|C_PI1HE|PROTEIN C|Human parainfluenza 1 virus (strain

Query: 1 KLYPNPAGEE 10
K+Y P GEE
Sbjct: 106 KVYTGPLGEE 115


>sp|CEP1_EHV2|CYTOPLASMIC envelopment protein 1|Equine herpesvirus 2 (strain 86/87)

Query: 2 LYPNP 6
LYPNP
Sbjct: 25 LYPNP 29


>sp|C_SENDA|PROTEIN C'|Sendai virus (strain Hamamatsu) (SeV)

Query: 1 KLYPNPAGEE 10
K+Y P GEE
Sbjct: 117 KIYTGPLGEE 126


>sp|OE56_NPVBM|OCCLUSION-DERIVED virus envelope protein E56|Bombyx mori nuclear polyhedrosis virus

Query: 1 KLYPNPA 7
KLYPN A
Sbjct: 12 KLYPNQA 18


>sp|C_PI1HC|PROTEIN C|Human parainfluenza 1 virus (strain

Query: 1 KLYPNPAGEE 10
K+Y P GEE
Sbjct: 106 KVYTGPLGEE 115


>sp|C_PI1HD|PROTEIN C|Human parainfluenza 1 virus (strain

Query: 1 KLYPNPAGEE 10
K+Y P GEE
Sbjct: 106 KVYTGPLGEE 115


>sp|TERL_BPHK7|TERMINASE, large subunit|Enterobacteria phage HK97 (Bacteriophage HK97)

Query: 2 LYPNPAGEE 10
+Y NPAG +
Sbjct: 40 VYDNPAGTD 48


>sp|C_PI1HB|PROTEIN C|Human parainfluenza 1 virus (strain

Query: 1 KLYPNPAGEE 10
K+Y P GEE
Sbjct: 106 KVYTGPLGEE 115




142|SequenceR|715|706|ATVSNKLYPN

>sp|OE56_NPVBM|OCCLUSION-DERIVED virus envelope protein E56|Bombyx mori nuclear polyhedrosis virus

Query: 5 NKLYPN 10
NKLYPN
Sbjct: 11 NKLYPN 16


>sp|PIF5_NPVAC|PER os infectivity factor 5|Autographa californica nuclear

Query: 5 NKLYPN 10
NKLYPN
Sbjct: 11 NKLYPN 16


>sp|MATA2_BPSP|MATURATION protein A2|Enterobacteria phage SP (Bacteriophage SP)

Query: 2 TVSNKLYPN 10
TVS++ YP+
Sbjct: 276 TVSSRFYPD 284


>sp|RDRP_ESRV9|RNA-DIRECTED RNA polymerase|Eriocheir sinensis reovirus (isolate China/905)

Query: 3 VSNKLYPN 10
V+N+L+PN
Sbjct: 648 VANELFPN 655


>sp|POLG_BTMV|GENOME polyprotein|Beet mosaic virus (BtMV)

Query: 1 ATVSNKLY 8
A+VSNKL+
Sbjct: 3044 ASVSNKLF 3051


>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)

Query: 3 VSNKLYPN 10
VSN YPN
Sbjct: 2876 VSNDRYPN 2883


>sp|149L_IIV6|UNCHARACTERIZED protein 149L|Invertebrate iridescent virus 6 (IIV-6)

Query: 3 VSNKLYPN 10
+ NKLYP+
Sbjct: 172 IENKLYPS 179


>sp|IE63_ALHV1|IMMEDIATE-EARLY phosphoprotein 57|Alcelaphine herpesvirus 1 (strain C500)

Query: 5 NKLYPN 10
N+LYPN
Sbjct: 88 NRLYPN 93




143|SequenceR|720|711|VLFERATVSN

***** No hits found ******


144|SequenceR|725|716|PLKESVLFER

***** No hits found ******


145|SequenceR|732|721|VEGKTHEPLKES

>sp|MCE_MYXVU|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Myxoma virus (strain

Query: 1 VEGKTHEPLKE 11
++G+TH+P+ E
Sbjct: 94 IDGRTHDPILE 104


>sp|MCE_MYXVL|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Myxoma virus (strain

Query: 1 VEGKTHEPLKE 11
++G+TH+P+ E
Sbjct: 94 IDGRTHDPILE 104


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 1 VEGKTHEP 8
VEG+TH P
Sbjct: 1243 VEGETHAP 1250


>sp|DPOL_TNAVC|DNA polymerase|Trichoplusia ni ascovirus 2c (TnAV-2c)

Query: 3 GKTHEPLK 10
GK H+P+K
Sbjct: 148 GKIHQPMK 155


>sp|YR290_MIMIV|PUTATIVE ATP-dependent RNA helicase R290|Acanthamoeba polyphaga mimivirus

Query: 4 KTHEPLKES 12
KT+EP+K S
Sbjct: 203 KTNEPIKAS 211


>sp|AN_ELHVK|ALKALINE nuclease|Elephantid herpesvirus 1 (isolate Asian

Query: 1 VEGKTHEPL 9
V GK HEP+
Sbjct: 170 VFGKVHEPI 178


>sp|CP81_BP186|UNCHARACTERIZED exonuclease CP81|Escherichia phage 186 (Bacteriophage 186)

Query: 1 VEGKTHEPLKE 11
VEGK H L +
Sbjct: 167 VEGKAHRALAD 177


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 4 KTHEPLKE 11
+THEP+ E
Sbjct: 1823 RTHEPMVE 1830


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 4 KTHEPLKE 11
+THEP+ E
Sbjct: 1824 RTHEPMVE 1831


>sp|POL_SIVG1|GAG-POL polyprotein|Simian immunodeficiency virus agm.grivet (isolate

Query: 2 EGKTHEPLKE 11
EG ++PLKE
Sbjct: 925 EGTYYDPLKE 934


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 4 KTHEPLKE 11
+TH+P+K+
Sbjct: 300 QTHDPVKQ 307


>sp|VP24_NPVOP|CAPSID protein p24|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 2 EGKTHEPLKE 11
+GKT +PL E
Sbjct: 111 QGKTFDPLCE 120




THE END