IL31R_HUMAN Blast Output
Archaea
1|Sequence|1|10|MMWTWALWML

>sp|GCH3_METS3|GTP cyclohydrolase III|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 MWTWAL 7
MWTW +
Sbjct: 245 MWTWVI 250


>sp|TRUA_PYRCJ|TRNA pseudouridine synthase A|Pyrobaculum calidifontis (strain DSM

Query: 2 MWTWAL 7
+WTWA+
Sbjct: 72 VWTWAV 77


>sp|NPD_METKA|NAD-DEPENDENT protein deacylase|Methanopyrus kandleri (strain AV19 /

Query: 2 MWTWALW 8
+W W LW
Sbjct: 61 VWEWYLW 67


>sp|HTPX1_METAC|PROTEASE HtpX homolog 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 MMWTWALW 8
M+ TWA W
Sbjct: 156 MLATWARW 163


>sp|MCRY_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 5 WALW 8
WALW
Sbjct: 299 WALW 302


>sp|MCRY_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 5 WALW 8
WALW
Sbjct: 299 WALW 302


>sp|MCRY_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 5 WALW 8
WALW
Sbjct: 300 WALW 303


>sp|MCRY_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 5 WALW 8
WALW
Sbjct: 299 WALW 302


>sp|Y303_ARCFU|UNCHARACTERIZED protein AF_0303|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WTWALW 8
W WA W
Sbjct: 385 WDWAWW 390


>sp|NPD1_ARCFU|NAD-DEPENDENT protein deacylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 MWTWALWML 10
+W W W +
Sbjct: 60 VWKWYAWRM 68


>sp|Y1068_METJA|UNCHARACTERIZED membrane protein MJ1068|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MMWTWALWML 10
+MW + +W L
Sbjct: 421 IMWIFQIWFL 430




2|Sequence|6|15|ALWMLPSLCK

>sp|SYFB_THESM|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus sibiricus (strain DSM 12597

Query: 3 WMLPSL 8
W+LPSL
Sbjct: 426 WLLPSL 431


>sp|SYFB_THEGJ|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 3 WMLPSL 8
W+LPSL
Sbjct: 434 WLLPSL 439


>sp|SYFB_PYRFU|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WMLPSL 8
W+LPSL
Sbjct: 426 WLLPSL 431


>sp|SYFB_PYRAB|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 WMLPSL 8
W+LPSL
Sbjct: 425 WLLPSL 430


>sp|SYFB_METKA|PHENYLALANINE--TRNA ligase beta subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 WMLPSLCK 10
W+LPSL +
Sbjct: 455 WILPSLMR 462


>sp|SYFB_PYRHO|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 WMLPSL 8
W+LPSL
Sbjct: 425 WILPSL 430


>sp|RL3_SULAC|LARGE ribosomal subunit protein uL3|Sulfolobus acidocaldarius (strain

Query: 3 WMLPSLCK 10
W++PSL K
Sbjct: 157 WLVPSLGK 164


>sp|RL7A_THEVO|LARGE ribosomal subunit protein eL8|Thermoplasma volcanium (strain ATCC

Query: 2 LWMLPSLCK 10
++ LPSLC+
Sbjct: 62 VYYLPSLCE 70


>sp|RL7A_THEAC|LARGE ribosomal subunit protein eL8|Thermoplasma acidophilum (strain

Query: 2 LWMLPSLCK 10
++ LPSLC+
Sbjct: 62 VYYLPSLCE 70


>sp|RBL_PYRHO|RIBULOSE bisphosphate carboxylase|Pyrococcus horikoshii (strain ATCC

Query: 2 LWMLPSLCK 10
LW LP + K
Sbjct: 58 LWKLPEMAK 66


>sp|RBL_PYRAB|RIBULOSE bisphosphate carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 2 LWMLPSLCK 10
LW LP + K
Sbjct: 57 LWKLPEMAK 65


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 3 WMLPSL 8
W++PSL
Sbjct: 438 WLIPSL 443


>sp|SYFB_THEKO|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 WMLPSL 8
W++PSL
Sbjct: 440 WLIPSL 445




3|Sequence|11|20|PSLCKFSLAA

>sp|MTMC1_METBA|MONOMETHYLAMINE corrinoid protein 1|Methanosarcina barkeri

Query: 1 PSLCKFSLAA 10
P LCK +LAA
Sbjct: 23 PELCKEALAA 32


>sp|DSRB_ARCFU|SULFITE reductase, dissimilatory-type subunit beta|Archaeoglobus fulgidus

Query: 1 PSLCKFSLA 9
P++C+ SLA
Sbjct: 168 PAMCRISLA 176


>sp|MTMC2_METBA|MONOMETHYLAMINE corrinoid protein 2|Methanosarcina barkeri

Query: 1 PSLCKFSLA 9
P LCK +LA
Sbjct: 23 PELCKEALA 31


>sp|Y352_METJA|UNCHARACTERIZED protein MJ0352|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LCKFSLAA 10
+CK+ LAA
Sbjct: 1 MCKYELAA 8


>sp|Y3936_METAC|UPF0060 membrane protein MA_3936|Methanosarcina acetivorans (strain ATCC

Query: 2 SLCKFSLAA 10
SLC F LAA
Sbjct: 7 SLCPFFLAA 15




4|Sequence|16|25|FSLAALPAKP

>sp|ASOR_PYRFU|ALIPHATIC sulfonate oxidoreductase, WOR-like subunit|Pyrococcus furiosus

Query: 2 SLAALPAK 9
S AALPAK
Sbjct: 471 STAALPAK 478




5|Sequence|21|30|LPAKPENISC

>sp|CARA_METVS|CARBAMOYL phosphate synthase small chain|Methanococcus vannielii (strain ATCC

Query: 2 PAKPENISC 10
PAK E ISC
Sbjct: 165 PAKDEKISC 173


>sp|Y779_METJA|UNCHARACTERIZED protein MJ0779|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PAKPENIS 9
P KPE+IS
Sbjct: 236 PVKPEDIS 243


>sp|Y2298_ARCFU|UNCHARACTERIZED DNA primase small subunit-like|Archaeoglobus fulgidus (strain ATCC

Query: 5 PENISC 10
PEN+SC
Sbjct: 130 PENVSC 135


>sp|RIFK_THEAC|RIBOFLAVIN kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LPAKPENISC 10
PAK +NI C
Sbjct: 171 FPAKIQNIPC 180


>sp|AROE_METTH|SHIKIMATE dehydrogenase (NADP(+))|Methanothermobacter thermautotrophicus

Query: 1 LPAKPENI 8
P KPEN+
Sbjct: 41 FPVKPENL 48


>sp|MTAP_SACS2|S-METHYL-5'-THIOADENOSINE phosphorylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LPAKPENISC 10
LP KPE SC
Sbjct: 250 LPEKPEEGSC 259


>sp|RLME_METVS|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus vannielii (strain

Query: 1 LPAKPENISC 10
LP KP+ I C
Sbjct: 110 LPEKPDVIIC 119


>sp|RLME_METMP|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 1 LPAKPENISC 10
LP KP+ I C
Sbjct: 110 LPEKPDVIIC 119


>sp|RLME_METM6|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 1 LPAKPENISC 10
LP KP+ I C
Sbjct: 110 LPEKPDVIIC 119


>sp|RLME_METM5|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 1 LPAKPENISC 10
LP KP+ I C
Sbjct: 110 LPEKPDVIIC 119


>sp|RLME_METM7|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 1 LPAKPENISC 10
LP KP+ I C
Sbjct: 110 LPEKPDVIIC 119


>sp|SYT_METHJ|THREONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PAKPENISC 10
P KP+ I+C
Sbjct: 568 PNKPQKITC 576


>sp|CETZ4_HALVD|TUBULIN-LIKE protein CetZ4|Haloferax volcanii (strain ATCC 29605

Query: 1 LPAKPENIS 9
LP +P N+S
Sbjct: 282 LPVEPANVS 290


>sp|G3P_METMJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 PENISC 10
PENI C
Sbjct: 308 PENIDC 313


>sp|CYDK_THEKO|CYTIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LPAKPENI 8
LP KPE I
Sbjct: 222 LPIKPEEI 229


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KPENISC 10
KPE I C
Sbjct: 626 KPETIDC 632


>sp|G3P_METVS|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 5 PENISC 10
PENI C
Sbjct: 309 PENIDC 314


>sp|G3P_METJA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PENISC 10
PENI C
Sbjct: 313 PENIDC 318


>sp|GLYA_SACI6|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 KPENIS 9
KPEN+S
Sbjct: 350 KPENVS 355


>sp|GLYA_SACI4|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 KPENIS 9
KPEN+S
Sbjct: 350 KPENVS 355


>sp|GLYA_SACI2|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 4 KPENIS 9
KPEN+S
Sbjct: 350 KPENVS 355


>sp|Y1471_METMP|UNCHARACTERIZED protein MMP1471|Methanococcus maripaludis (strain DSM 14266

Query: 1 LPAKPENISC 10
+ KP NISC
Sbjct: 161 IKIKPYNISC 170


>sp|GLYA_SACI3|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 4 KPENIS 9
KPEN+S
Sbjct: 350 KPENVS 355


>sp|GLYA_SACI1|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 4 KPENIS 9
KPEN+S
Sbjct: 350 KPENVS 355


>sp|G3P_META3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 PENISC 10
PENI C
Sbjct: 309 PENIDC 314


>sp|GLYA_SACI7|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 4 KPENIS 9
KPEN+S
Sbjct: 350 KPENVS 355


>sp|G3P_ARCFU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 AKPENI 8
AKPEN+
Sbjct: 54 AKPENV 59


>sp|G3P_METM7|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 5 PENISC 10
PEN+ C
Sbjct: 309 PENVDC 314


>sp|G3P_METM5|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 5 PENISC 10
PEN+ C
Sbjct: 309 PENVDC 314


>sp|G3P_METMP|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 5 PENISC 10
PEN+ C
Sbjct: 309 PENVDC 314


>sp|G3P_METM6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C6 /

Query: 5 PENISC 10
PEN+ C
Sbjct: 309 PENVDC 314


>sp|NFI_DESA1|ENDONUCLEASE V|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 LPAKPENI 8
LPAKP+ I
Sbjct: 97 LPAKPDII 104




6|Sequence|26|35|ENISCVYYYR

>sp|RNJL_METJA|RNASE J-like protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ENISCVYYY 9
ENI C+ YY
Sbjct: 106 ENIECLNYY 114


>sp|MOAA_METTM|PROBABLE GTP 3',8-cyclase|Methanothermobacter marburgensis (strain ATCC

Query: 2 NISCVYYYR 10
N+SC+Y +R
Sbjct: 23 NVSCIYCHR 31


>sp|MOAA_PYRHO|PROBABLE GTP 3',8-cyclase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NISCVYYYR 10
N+SC Y +R
Sbjct: 22 NLSCFYCHR 30


>sp|PHS_SACS2|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Saccharolobus

Query: 5 CVYYYR 10
CVYY R
Sbjct: 59 CVYYNR 64


>sp|PHS_METS5|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Metallosphaera sedula

Query: 5 CVYYYR 10
CVYY R
Sbjct: 59 CVYYNR 64


>sp|Y2298_ARCFU|UNCHARACTERIZED DNA primase small subunit-like|Archaeoglobus fulgidus (strain ATCC

Query: 1 ENISCVYY 8
EN+SC Y+
Sbjct: 131 ENVSCPYH 138


>sp|PURP_METKA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanopyrus kandleri (strain AV19 /

Query: 5 CVYYYR 10
CV+Y+R
Sbjct: 208 CVHYFR 213


>sp|FDHC_METTF|PROBABLE formate transporter|Methanothermobacter thermautotrophicus

Query: 3 ISCVYYY 9
++C+Y+Y
Sbjct: 263 VACLYWY 269


>sp|Y310_ARCFU|UNCHARACTERIZED protein AF_0310|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NISCVYY 8
N+ C+YY
Sbjct: 96 NLKCIYY 102


>sp|ACDE_METTH|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanothermobacter

Query: 3 ISCVYY 8
I C+YY
Sbjct: 117 IGCIYY 122


>sp|Y804_METJA|UNCHARACTERIZED protein MJ0804|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NISCVYYY 9
N++C+Y Y
Sbjct: 51 NLNCIYCY 58




7|Sequence|31|40|VYYYRKNLTC

>sp|KUP_METBF|PROBABLE potassium transport system protein|Methanosarcina barkeri (strain

Query: 1 VYYYRKNLT 9
++Y+RKN+T
Sbjct: 384 IFYHRKNIT 392


>sp|HDRB1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit B1|Methanococcus

Query: 1 VYYYRKNLTC 10
+YY KN+ C
Sbjct: 190 IYYKDKNMCC 199


>sp|Y675_METJA|UNCHARACTERIZED protein MJ0675|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YRKNLTC 10
Y+K+LTC
Sbjct: 107 YKKSLTC 113


>sp|PELO_SULAC|PROTEIN pelota homolog|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VYYYRKNLT 9
+YY KNLT
Sbjct: 323 IYYQVKNLT 331


>sp|TRPB_METVO|TRYPTOPHAN synthase beta chain|Methanococcus voltae

Query: 3 YYRKNLT 9
YY KNLT
Sbjct: 64 YYAKNLT 70


>sp|XPD_SULAC|ATP-DEPENDENT DNA helicase XPD|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YYRKNLTC 10
Y++KNL C
Sbjct: 536 YWKKNLKC 543


>sp|DHYS_METVS|PROBABLE deoxyhypusine synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VYYYRKN 7
+Y+Y+KN
Sbjct: 222 LYFYKKN 228


>sp|TMCA_THEKO|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus kodakarensis (strain

Query: 2 YYYRKNLT 9
YYY++ LT
Sbjct: 804 YYYKRLLT 811


>sp|KHSE_METVS|HOMOSERINE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VYYYRKNLTC 10
VYY R L C
Sbjct: 287 VYYTRVGLGC 296


>sp|DGGGP_IGNH4|DIGERANYLGERANYLGLYCERYL phosphate synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VYYYRKNL 8
+YYY K+L
Sbjct: 118 MYYYSKSL 125


>sp|Y1331_ARCFU|UNCHARACTERIZED protein AF_1331|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YYYRKNL 8
YY RKNL
Sbjct: 257 YYGRKNL 263


>sp|PDXS_THEAC|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermoplasma acidophilum (strain

Query: 2 YYYRKNLT 9
+ Y+KNLT
Sbjct: 121 HLYKKNLT 128


>sp|CBIA_METST|COBYRINATE a,c-diamide synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 YYYRKNL 8
+YY++NL
Sbjct: 261 FYYKENL 267


>sp|DGGGP_SULTO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VYYYRKNL 8
+YYY K+L
Sbjct: 117 LYYYAKDL 124




8|Sequence|36|45|KNLTCTWSPG

>sp|CCA_METBF|CCA-ADDING enzyme|Methanosarcina barkeri (strain Fusaro /

Query: 5 CTWSPG 10
C+W PG
Sbjct: 208 CSWKPG 213


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 1 KNLTCTW 7
+++TCTW
Sbjct: 356 EDVTCTW 362


>sp|CCA_METAC|CCA-ADDING enzyme|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 CTWSPG 10
C W PG
Sbjct: 208 CLWKPG 213


>sp|DNLI_METVS|DNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KNLTCTWSPG 10
KNL ++PG
Sbjct: 421 KNLNAIYTPG 430


>sp|THII_METAC|PROBABLE tRNA sulfurtransferase|Methanosarcina acetivorans (strain ATCC

Query: 6 TWSPG 10
TW+PG
Sbjct: 257 TWAPG 261


>sp|SRP54_THEGJ|SIGNAL recognition particle 54 kDa|Thermococcus gammatolerans (strain DSM

Query: 4 TCTWSPG 10
T TW PG
Sbjct: 136 TDTWRPG 142


>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 4 TCTW 7
TCTW
Sbjct: 620 TCTW 623




9|Sequence|41|50|TWSPGKETSY

>sp|FAU1_THEPD|PROBABLE ribonuclease FAU-1|Thermofilum pendens (strain DSM 2475

Query: 2 WSPGKETS 9
+SPGK T+
Sbjct: 109 YSPGKRTT 116


>sp|THII_METAC|PROBABLE tRNA sulfurtransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 TWSPGKE 7
TW+PG +
Sbjct: 257 TWAPGHQ 263


>sp|Y586_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0586|Methanocaldococcus

Query: 1 TWSPGKETSY 10
T S G+ETSY
Sbjct: 142 TESIGEETSY 151


>sp|CCA_METMA|CCA-ADDING enzyme|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TWSPGKE 7
+W PGK+
Sbjct: 209 SWKPGKK 215


>sp|MDH_SULAC|MALATE dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TWSPGKE 7
TW PG +
Sbjct: 220 TWGPGAD 226


>sp|CCA_METAC|CCA-ADDING enzyme|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 WSPGKE 7
W PGK+
Sbjct: 210 WKPGKK 215


>sp|TDXH1_SULME|PEROXIREDOXIN 1|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 2 WSPGKE 7
W PG+E
Sbjct: 169 WEPGQE 174


>sp|SYC_PYRCJ|CYSTEINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 TWSPGK 6
+WSPG+
Sbjct: 190 SWSPGE 195




10|Sequence|46|55|KETSYTQYTV

>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 2 ETSYTQYTV 10
ETSYT Y V
Sbjct: 515 ETSYTNYNV 523


>sp|GCSPA_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 3 TSYTQY 8
TSYTQY
Sbjct: 94 TSYTQY 99


>sp|GCSPA_HALS3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 3 TSYTQY 8
TSYTQY
Sbjct: 94 TSYTQY 99


>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 ETSYTQYT 9
+TS+T YT
Sbjct: 180 QTSWTMYT 187




11|Sequence|51|60|TQYTVKRTYA

>sp|PRIS_SULTO|DNA primase small subunit PriS|Sulfurisphaera tokodaii (strain DSM

Query: 2 QYTVKRTY 9
+YTVKRTY
Sbjct: 286 KYTVKRTY 293


>sp|DHAS_METTH|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 YTVKRTY 9
YT+KR Y
Sbjct: 163 YTIKRVY 169


>sp|FTHS_THEVO|FORMATE--TETRAHYDROFOLATE ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 YTVKRTY 9
Y +KRTY
Sbjct: 413 YQIKRTY 419


>sp|SYFB_NATPD|PHENYLALANINE--TRNA ligase beta subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 3 YTVKRTYA 10
YTV RT+A
Sbjct: 436 YTVVRTWA 443


>sp|SYC_HALSA|CYSTEINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 TQYTVKRTYA 10
T YT ++TY+
Sbjct: 317 TSYTQRQTYS 326


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 TQYTVKRTY 9
T Y V RTY
Sbjct: 272 TNYKVLRTY 280


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 TQYTVKRTY 9
T Y V RTY
Sbjct: 272 TNYKVLRTY 280


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TQYTVKRTYA 10
T Y+V TYA
Sbjct: 201 TVYSVNTTYA 210


>sp|PYRB_METST|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaera stadtmanae

Query: 3 YTVKRT 8
YT+KRT
Sbjct: 144 YTIKRT 149


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TQYTVKRTYA 10
T Y+V TYA
Sbjct: 203 TVYSVNTTYA 212


>sp|RL1_SULAC|LARGE ribosomal subunit protein uL1|Sulfolobus acidocaldarius (strain

Query: 1 TQYTVKRTY 9
T+Y VKR +
Sbjct: 21 TEYNVKRNF 29




12|Sequence|56|65|KRTYAFGEKH

>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 RTYAFGEKH 10
+TYAF E H
Sbjct: 1574 QTYAFDENH 1582


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 RTYAFGEKH 10
+ YAFG K+
Sbjct: 451 QVYAFGNKY 459


>sp|RFHPS_METJA|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 YAFGEK 9
YAFG+K
Sbjct: 290 YAFGDK 295




13|Sequence|61|70|FGEKHDNCTT

>sp|LYSZ_NITMS|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Nitrosopumilus

Query: 5 HDNCT 9
HDNCT
Sbjct: 258 HDNCT 262


>sp|RNP3_METM6|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C6 /

Query: 1 FGEKHD 6
+GEKHD
Sbjct: 48 YGEKHD 53


>sp|RNP3_METM7|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C7 /

Query: 1 FGEKHD 6
+GEKHD
Sbjct: 48 YGEKHD 53


>sp|PYRG_METST|CTP synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 EKHDNC 8
E HDNC
Sbjct: 165 EGHDNC 170


>sp|HEM1_META3|GLUTAMYL-TRNA reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FGEKHDNC 8
F +K+DNC
Sbjct: 26 FYKKYDNC 33


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 FGEKHDNC 8
+G++ DNC
Sbjct: 152 YGDQCDNC 159


>sp|G3P_METTH|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 GEKHD 6
GEKHD
Sbjct: 110 GEKHD 114


>sp|G3P_METBR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium bryantii

Query: 2 GEKHD 6
GEKHD
Sbjct: 111 GEKHD 115


>sp|G3P_METFO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium formicicum

Query: 2 GEKHD 6
GEKHD
Sbjct: 111 GEKHD 115


>sp|LYSZ_CENSY|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Cenarchaeum symbiosum

Query: 5 HDNCT 9
H+NCT
Sbjct: 257 HENCT 261


>sp|SYFB_META3|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GEKHD 6
GEKHD
Sbjct: 360 GEKHD 364


>sp|MFNA_METM7|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 3 EKHDNC 8
+KHD C
Sbjct: 334 DKHDTC 339




14|Sequence|66|75|DNCTTNSSTS

>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 1 DNCTTNSST 9
D+C TN++T
Sbjct: 536 DSCETNATT 544


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 1 DNCTTNSS 8
D C TNS+
Sbjct: 536 DTCETNST 543


>sp|PYRI_THEPD|ASPARTATE carbamoyltransferase regulatory chain|Thermofilum pendens (strain

Query: 2 NCTTNS 7
NC TNS
Sbjct: 112 NCVTNS 117


>sp|Y1236_ARCFU|UNCHARACTERIZED protein AF_1236|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NCTTNSSTS 10
NC+ N STS
Sbjct: 96 NCSNNLSTS 104




15|Sequence|71|80|NSSTSENRAS

***** No hits found ******


16|Sequence|76|85|ENRASCSFFL

>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain ATCC

Query: 1 ENRASCSFFL 10
E+RA+C + L
Sbjct: 737 EDRAACEYIL 746


>sp|LEUC_PICTO|3-ISOPROPYLMALATE dehydratase large subunit|Picrophilus torridus (strain ATCC 700027

Query: 1 ENRASCSFF 9
E A CSFF
Sbjct: 215 EAGAKCSFF 223




17|Sequence|81|90|CSFFLPRITI

>sp|RNJL_SACS2|RNASE aCSPSF2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 CSFFLPRITI 10
CS F+P ++I
Sbjct: 31 CSVFIPILSI 40


>sp|PYRH_METS5|URIDYLATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 4 FLPRIT 9
FLPR+T
Sbjct: 155 FLPRVT 160


>sp|Y1303_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ1303|Methanocaldococcus jannaschii

Query: 1 CSFFLPRITI 10
CS+ PR TI
Sbjct: 187 CSYLCPRDTI 196




18|Sequence|86|95|PRITIPDNYT

>sp|CYAS_METPS|CYSTEATE synthase|Methanocella paludicola (strain DSM 17711

Query: 2 RITIPDNYT 10
R TIPDNYT
Sbjct: 12 RHTIPDNYT 20


>sp|NADA_METB6|QUINOLINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 PRITIPD 7
PRIT+PD
Sbjct: 280 PRITVPD 286


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 RITIPDNY 9
+IT+PDN+
Sbjct: 474 KITVPDNF 481


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 ITIPDNY 9
IT+PDN+
Sbjct: 466 ITVPDNF 472


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 ITIPDNY 9
IT+PDN+
Sbjct: 466 ITVPDNF 472


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 ITIPDNY 9
IT+PDN+
Sbjct: 466 ITVPDNF 472


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 ITIPDNY 9
IT+PDN+
Sbjct: 466 ITVPDNF 472


>sp|NAT_SACS2|N-ALPHA-ACETYLTRANSFERASE solfataricus (strain ATCC 35092

Query: 2 RITIPDNY 9
R+T+P+NY
Sbjct: 30 RLTLPENY 37


>sp|RS3_METST|SMALL ribosomal subunit protein uS3|Methanosphaera stadtmanae (strain

Query: 1 PRITIPDN 8
P +T+PDN
Sbjct: 184 PEVTLPDN 191


>sp|RS3_METBF|SMALL ribosomal subunit protein uS3|Methanosarcina barkeri (strain Fusaro

Query: 1 PRITIPDNYT 10
P + +PD+YT
Sbjct: 185 PGVVLPDSYT 194


>sp|IF6_METS3|TRANSLATION initiation factor 6|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 TIPDNYT 10
TIP NYT
Sbjct: 91 TIPGNYT 97


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 1 PRITIPDN 8
PRI PDN
Sbjct: 110 PRINWPDN 117


>sp|CYAS_METAR|CYSTEATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 4 TIPDNYT 10
T+PD+YT
Sbjct: 14 TVPDHYT 20


>sp|RNZ_PYRIL|RIBONUCLEASE Z|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PRITIPDNY 9
P I IPD++
Sbjct: 272 PHIYIPDDF 280


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RITIPDNY 9
++ IPDN+
Sbjct: 478 KVNIPDNF 485


>sp|NAT_SULTO|N-ALPHA-ACETYLTRANSFERASE tokodaii (strain DSM 16993

Query: 2 RITIPDNY 9
R+ +P+NY
Sbjct: 30 RLALPENY 37


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RITIPDNY 9
++ IPDN+
Sbjct: 478 KVNIPDNF 485


>sp|CYAS_METMJ|CYSTEATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 6 PDNYT 10
PDNYT
Sbjct: 17 PDNYT 21


>sp|RS3_META3|SMALL ribosomal subunit protein uS3|Methanococcus aeolicus (strain ATCC

Query: 1 PRITIPD 7
P IT+PD
Sbjct: 184 PEITLPD 190


>sp|PURL_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PRITIPDNYT 10
PR T+ D YT
Sbjct: 441 PRATLLDPYT 450


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 3 ITIPDNY 9
IT+PD Y
Sbjct: 29 ITVPDTY 35


>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 RITIPD 7
RITIPD
Sbjct: 285 RITIPD 290


>sp|Y1493_THEPD|UPF0173 metal-dependent hydrolase Tpen_1493|Thermofilum pendens (strain DSM

Query: 1 PRITIPDNY 9
PR+ IP +Y
Sbjct: 183 PRLAIPMHY 191


>sp|Y3519_METJA|UNCHARACTERIZED protein MJECL19|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 IPDNY 9
IPDNY
Sbjct: 137 IPDNY 141




19|Sequence|91|100|PDNYTIEVEA

>sp|CYAS_METPS|CYSTEATE synthase|Methanocella paludicola (strain DSM 17711

Query: 1 PDNYTIEVE 9
PDNYT+ E
Sbjct: 16 PDNYTLRCE 24


>sp|RS10_METS3|SMALL ribosomal subunit protein uS10|Methanobrevibacter smithii (strain

Query: 1 PDNYTIEVE 9
PDN +IE+E
Sbjct: 91 PDNVSIEIE 99


>sp|RS10_METTH|SMALL ribosomal subunit protein uS10|Methanothermobacter

Query: 1 PDNYTIEVE 9
PDN +IE+E
Sbjct: 91 PDNVSIEIE 99


>sp|CYAS_METMJ|CYSTEATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PDNYTIE 7
PDNYT++
Sbjct: 17 PDNYTLD 23


>sp|RS10_METST|SMALL ribosomal subunit protein uS10|Methanosphaera stadtmanae (strain

Query: 1 PDNYTIEVE 9
PDN +IE+E
Sbjct: 91 PDNVSIEIE 99


>sp|CARA_SACS2|CARBAMOYL phosphate synthase small chain|Saccharolobus solfataricus (strain

Query: 1 PDNYTIE 7
PD+YTIE
Sbjct: 322 PDDYTIE 328


>sp|IF2G_NATPD|TRANSLATION initiation factor 2 subunit|Natronomonas pharaonis (strain ATCC

Query: 1 PDNYTIE 7
PD YT+E
Sbjct: 65 PDRYTVE 71


>sp|CSG_HALSA|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 700922

Query: 1 PDNYTIEVE 9
P NYT+E +
Sbjct: 749 PGNYTVEAD 757


>sp|CSG_HALS3|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 29341

Query: 1 PDNYTIEVE 9
P NYT+E +
Sbjct: 749 PGNYTVEAD 757


>sp|CSG_HALMA|CELL surface glycoprotein|Haloarcula marismortui (strain ATCC 43049

Query: 1 PDNYTIEVE 9
P NYT+E +
Sbjct: 772 PGNYTVEAD 780


>sp|RS10_METJA|SMALL ribosomal subunit protein uS10|Methanocaldococcus jannaschii

Query: 1 PDNYTIEVE 9
PDN IE++
Sbjct: 91 PDNVQIEIQ 99


>sp|CAPPA_PYRAB|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 PDNYTI 6
PDNY+I
Sbjct: 11 PDNYSI 16


>sp|CAPPA_PYRHO|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PDNYTI 6
PDNY+I
Sbjct: 11 PDNYSI 16


>sp|CAPPA_PYRFU|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PDNYTI 6
PDNY+I
Sbjct: 11 PDNYSI 16


>sp|RTCA_PYRAE|RNA 3'-terminal phosphate cyclase|Pyrobaculum aerophilum (strain ATCC

Query: 4 YTIEVEA 10
YTIEVE
Sbjct: 337 YTIEVEG 343


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 PDNYTIEVE 9
PD+Y+ +VE
Sbjct: 4 PDDYSTDVE 12


>sp|GUAAA_HALSA|GMP synthase [glutamine-hydrolyzing] subunit A|Halobacterium salinarum

Query: 1 PDNYTIEVEA 10
PD +TI E+
Sbjct: 132 PDGFTITAES 141


>sp|SYFB_METS5|PHENYLALANINE--TRNA ligase beta subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 DNYTIEVEA 10
D Y+IEV A
Sbjct: 39 DEYSIEVNA 47


>sp|DNAK_NATPD|CHAPERONE protein DnaK|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DNYTIEV 8
D+YT+EV
Sbjct: 78 DDYTVEV 84


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PDNYTIEVE 9
P +Y IE+E
Sbjct: 4 PKDYNIEIE 12


>sp|BIOW_METRM|6-CARBOXYHEXANOATE--COA ligase|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 2 DNYTIE 7
DNYT+E
Sbjct: 237 DNYTLE 242


>sp|MOBDB_HALVD|PUTATIVE ABC transporter molybdenum-binding protein|Haloferax volcanii

Query: 1 PDNYTIEVEA 10
PD IEVEA
Sbjct: 62 PDGTRIEVEA 71




20|Sequence|96|105|IEVEAENGDG

>sp|GVPO_HALMT|GAS vesicle protein O|Haloferax mediterranei (strain ATCC 33500

Query: 1 IEVEAENGDG 10
I++EA NGDG
Sbjct: 80 IKIEAANGDG 89


>sp|ARCH_ARCFU|PROTEIN archease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IEVEAENGDG 10
+EVE E GDG
Sbjct: 82 VEVEVEEGDG 91


>sp|Y1344_THEGJ|UPF0212 protein TGAM_1344|Thermococcus gammatolerans (strain DSM 15229

Query: 2 EVEAENGDG 10
E+E ENGDG
Sbjct: 112 ELEEENGDG 120


>sp|CAS1B_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 EVEAENG 8
E+EAENG
Sbjct: 246 ELEAENG 252


>sp|HYPA_METBF|HYDROGENASE maturation factor HypA|Methanosarcina barkeri (strain Fusaro /

Query: 1 IEVEAENGD 9
IE+E EN D
Sbjct: 125 IEIETENQD 133


>sp|AATB_HALSA|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC

Query: 1 IEVEAENGD 9
+E+E NGD
Sbjct: 29 VEIETPNGD 37


>sp|AATB_HALS3|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 29341

Query: 1 IEVEAENGD 9
+E+E NGD
Sbjct: 29 VEIETPNGD 37


>sp|COBS_HALLT|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 IEVEAENGDG 10
+EV A GDG
Sbjct: 127 VEVAATAGDG 136


>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IEVEAENGD 9
+E+E NGD
Sbjct: 29 VEIETPNGD 37




21|Sequence|101|110|ENGDGVIKSH

>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 ENGDGVIKSH 10
E+G VIK H
Sbjct: 85 EDGSAVIKQH 94


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ENGDGVIKS 9
ENG G++ S
Sbjct: 308 ENGSGIVMS 316


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ENGDGVIKS 9
ENG G++ S
Sbjct: 308 ENGSGIVMS 316


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ENGDGVIKS 9
ENG G++ S
Sbjct: 308 ENGSGIVMS 316


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ENGDGVIKS 9
ENG G++ S
Sbjct: 308 ENGSGIVMS 316


>sp|Y958_METJA|UNCHARACTERIZED protein MJ0958|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ENGDGVI 7
+NGDG++
Sbjct: 103 KNGDGIV 109


>sp|Y1384_THEVO|PROTEIN TV1384|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ENGDGVIKS 9
E G+G+IKS
Sbjct: 72 ELGEGIIKS 80


>sp|RNP2_METMA|RIBONUCLEASE P protein component 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ENGDGVIK-SH 10
ENG G+I+ SH
Sbjct: 58 ENGKGIIQCSH 68


>sp|ENO_METVS|ENOLASE vannielii (strain ATCC 35089

Query: 2 NGDGVIKSH 10
NG GVI SH
Sbjct: 358 NGYGVIVSH 366


>sp|PRIS_SULAC|DNA primase small subunit PriS|Sulfolobus acidocaldarius (strain ATCC

Query: 3 GDGVIKSH 10
G GVIK+H
Sbjct: 313 GYGVIKAH 320


>sp|THYX_AERPE|FLAVIN-DEPENDENT thymidylate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ENGDGVIKSH 10
+ GDGV++++
Sbjct: 175 DGGDGVVEAY 184


>sp|IF2B_METMJ|TRANSLATION initiation factor 2 subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 ENGDGVIK 8
+ GDGV+K
Sbjct: 163 KRGDGVVK 170


>sp|DNAG_METMP|DNA primase DnaG|Methanococcus maripaludis (strain DSM 14266

Query: 2 NGDGVIKSH 10
NG GVI+S+
Sbjct: 274 NGSGVIESN 282


>sp|BAST_HALS3|TRANSDUCER protein BasT|Halobacterium salinarum (strain ATCC 29341

Query: 2 NGDGVI 7
NGDGVI
Sbjct: 210 NGDGVI 215


>sp|TOP6B_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 1 ENGDGVIKSH 10
+NG G+IK
Sbjct: 80 DNGPGIIKEQ 89


>sp|DHE3_AERPE|GLUTAMATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 2 NGDGVIKSH 10
N GVI SH
Sbjct: 341 NAGGVIMSH 349


>sp|EF1A_CENSY|ELONGATION factor 1-alpha|Cenarchaeum symbiosum (strain A)

Query: 1 ENGDGVIKS 9
E G+G++KS
Sbjct: 174 EKGEGLVKS 182


>sp|ENO_META3|ENOLASE aeolicus (strain ATCC BAA-1280

Query: 2 NGDGVIKSH 10
NG GV+ SH
Sbjct: 357 NGYGVVVSH 365


>sp|GATE_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanothermobacter thermautotrophicus

Query: 1 ENGDGVI 7
E GDGV+
Sbjct: 166 ETGDGVV 172




22|Sequence|106|115|VIKSHMTYWR

>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IKSHMTYW 9
I+SH YW
Sbjct: 576 IRSHFNYW 583


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IKSHMTYW 9
I+SH YW
Sbjct: 576 IRSHFNYW 583


>sp|RL2_METPE|LARGE ribosomal subunit protein uL2|Methanosphaerula palustris (strain

Query: 2 IKSHMTYW 9
+KS TYW
Sbjct: 180 VKSQATYW 187


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 IKSHMTYW 9
++ H TYW
Sbjct: 575 LRRHFTYW 582


>sp|Y1355_METJA|UNCHARACTERIZED protein MJ1355|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VIKSHMTYW 9
V+K+ TYW
Sbjct: 324 VVKNKDTYW 332


>sp|PPS_THEON|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus onnurineus (strain NA1)

Query: 3 KSHMTYW 9
KSH YW
Sbjct: 6 KSHPRYW 12


>sp|PPS_THEKO|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 KSHMTYW 9
KSH YW
Sbjct: 6 KSHPRYW 12


>sp|Y2187_ARCFU|UNCHARACTERIZED protein AF_2187|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 SHMTYWR 10
SH+T WR
Sbjct: 18 SHLTIWR 24


>sp|Y1127_METTP|PUTATIVE nickel insertion protein|Methanothrix thermoacetophila (strain DSM

Query: 1 VIKSHMTYWR 10
+++SH WR
Sbjct: 168 ILRSHRIPWR 177


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 KSHMTYWR 10
K H YW+
Sbjct: 154 KEHEIYWK 161


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IKSHMTYW 9
IKS YW
Sbjct: 569 IKSEFKYW 576


>sp|MCRC_METTM|METHYL-COENZYME M reductase I operon|Methanothermobacter marburgensis (strain ATCC

Query: 2 IKSHMTY 8
+K+H+TY
Sbjct: 113 VKNHITY 119


>sp|MCRC_METTH|METHYL-COENZYME M reductase I operon|Methanothermobacter thermautotrophicus (strain

Query: 2 IKSHMTY 8
+K+H+TY
Sbjct: 113 VKNHITY 119




23|Sequence|111|120|MTYWRLENIA

>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MTYWRLEN 8
MTYW EN
Sbjct: 138 MTYWDFEN 145


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TYWRLEN 8
TYW+ EN
Sbjct: 487 TYWQFEN 493


>sp|CCA_PYRHO|CCA-ADDING enzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TYWRLENI 9
T+W LENI
Sbjct: 143 THWVLENI 150


>sp|KAE1_PYRIL|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum islandicum

Query: 4 WRLENI 9
WRL+N+
Sbjct: 316 WRLDNV 321


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 3 YWRLENI 9
+WR+E I
Sbjct: 20 FWRIEEI 26


>sp|RAD50_METKA|DNA double-strand break repair Rad50|Methanopyrus kandleri (strain AV19

Query: 4 WRLENIA 10
WR+EN A
Sbjct: 860 WRIENRA 866


>sp|PURL_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina barkeri (strain Fusaro /

Query: 3 YWRLEN 8
YW+L+N
Sbjct: 489 YWQLKN 494


>sp|T2M6_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 TYWRLE 7
TYW+L+
Sbjct: 145 TYWKLK 150


>sp|CDPAS_AERPE|CDP-ARCHAEOL synthase|Aeropyrum pernix (strain ATCC 700893

Query: 4 WRLENI 9
WR++NI
Sbjct: 9 WRIDNI 14


>sp|TFE_THEKO|TRANSCRIPTION factor E|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 YWRLEN 8
YWRLE
Sbjct: 79 YWRLET 84




24|Sequence|116|125|LENIAKTEPP

>sp|SUCC_PYRAR|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum arsenaticum (strain

Query: 1 LENIAKTEP 9
+E IAKT+P
Sbjct: 125 IEEIAKTQP 133


>sp|PYRF_SULTO|OROTIDINE 5'-phosphate decarboxylase|Sulfurisphaera tokodaii (strain DSM

Query: 1 LENIAKTEPP 10
L+NIAKT P
Sbjct: 121 LKNIAKTIDP 130


>sp|SUCC_PYRAE|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum aerophilum (strain

Query: 1 LENIAKTEP 9
+E IAKT P
Sbjct: 125 IEEIAKTSP 133


>sp|SUCC_PYRIL|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum islandicum (strain

Query: 1 LENIAKTEP 9
+E IAKT P
Sbjct: 125 IEEIAKTSP 133


>sp|PELO_PYRAB|PROTEIN pelota homolog|Pyrococcus abyssi (strain GE5 /

Query: 1 LENIAKTEP 9
+E IAK EP
Sbjct: 271 IERIAKDEP 279


>sp|SUCC_PYRCJ|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum calidifontis (strain

Query: 1 LENIAKTEP 9
+E IAKT P
Sbjct: 125 IEEIAKTTP 133




25|Sequence|121|130|KTEPPKIFRV

>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 KTEPPKIF 8
K EPPK+F
Sbjct: 471 KPEPPKVF 478


>sp|PUR5_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 EPPKIFRV 10
EP +IFRV
Sbjct: 265 EPQQIFRV 272


>sp|TOP6B_THESM|TYPE 2 DNA topoisomerase 6|Thermococcus sibiricus (strain DSM 12597

Query: 2 TEPPKIFR 9
T PPK++R
Sbjct: 387 TRPPKVYR 394


>sp|NADE_SACS2|NH(3)-DEPENDENT NAD(+) synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KTEPPKIFRV 10
K PP+IFR+
Sbjct: 253 KRLPPEIFRL 262


>sp|GUAAA_SACS2|GMP synthase [glutamine-hydrolyzing] subunit A|Saccharolobus

Query: 3 EPPKIFRV 10
EPP FRV
Sbjct: 134 EPPSGFRV 141


>sp|NADE_SULAC|NH(3)-DEPENDENT NAD(+) synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KTEPPKIFRV 10
K PP+IFR+
Sbjct: 254 KRLPPEIFRL 263


>sp|SUCC_PYRAR|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum arsenaticum (strain

Query: 1 KTEPPKIFRV 10
KT+P KI RV
Sbjct: 130 KTQPEKIKRV 139


>sp|NADE_SULTO|NH(3)-DEPENDENT NAD(+) synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PPKIFRV 10
PP+IFR+
Sbjct: 257 PPEIFRL 263


>sp|HTPX1_SACS2|PROTEASE HtpX homolog 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KTEPPKIFRV 10
K +PP++F +
Sbjct: 88 KIKPPRVFVI 97


>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TEPPKIF 8
+EPPK F
Sbjct: 181 SEPPKTF 187


>sp|MALE_PYRAB|MALTOTRIOSE-BINDING protein|Pyrococcus abyssi (strain GE5 /

Query: 2 TEPPKIF 8
+EPPK F
Sbjct: 200 SEPPKTF 206


>sp|Y550_METVS|UPF0280 protein Mevan_0550|Methanococcus vannielii (strain ATCC 35089

Query: 1 KTEPPKIFRV 10
K + PK+F++
Sbjct: 18 KVDNPKLFKI 27




26|Sequence|126|135|KIFRVKPVLG

>sp|PSB_HALSA|PROTEASOME subunit beta|Halobacterium salinarum (strain ATCC 700922

Query: 3 FRVKPVLG 10
FRV P+LG
Sbjct: 142 FRVVPILG 149


>sp|PSB_HALS3|PROTEASOME subunit beta|Halobacterium salinarum (strain ATCC 29341

Query: 3 FRVKPVLG 10
FRV P+LG
Sbjct: 142 FRVVPILG 149


>sp|SYFB_METBU|PHENYLALANINE--TRNA ligase beta subunit|Methanococcoides burtonii (strain DSM 6242

Query: 1 KIFRVKPVLG 10
KI V+PVLG
Sbjct: 89 KIKEVRPVLG 98


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 3 FRVKPVLG 10
FRVKP+ G
Sbjct: 416 FRVKPIPG 423


>sp|IF2P_SULTO|PROBABLE translation initiation factor IF-2|Sulfurisphaera tokodaii (strain

Query: 3 FRVKPVLG 10
FRVKP+ G
Sbjct: 419 FRVKPLQG 426


>sp|IF2P_SULAC|PROBABLE translation initiation factor IF-2|Sulfolobus acidocaldarius

Query: 3 FRVKPVLG 10
FRVKP+ G
Sbjct: 418 FRVKPLSG 425


>sp|CAPPA_PYRAR|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 RVKPVLG 10
RV+P+LG
Sbjct: 221 RVRPILG 227


>sp|DNLI_METKA|DNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 KIFRVKPVL 9
K+ +VKPVL
Sbjct: 420 KMLKVKPVL 428


>sp|FLAH_METJA|ARCHAEAL flagellar ATP-binding protein FlaH|Methanocaldococcus jannaschii

Query: 2 IFRVKPVLG 10
+FRV+P +G
Sbjct: 216 VFRVEPKIG 224


>sp|RL10E_NANEQ|LARGE ribosomal subunit protein uL16|Nanoarchaeum equitans (strain

Query: 2 IFRVKPVLG 10
I+R KPV+G
Sbjct: 102 IYREKPVVG 110


>sp|SEPS_METM7|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C7 /

Query: 4 RVKPVLG 10
R+KPV G
Sbjct: 37 RIKPVFG 43


>sp|SEPS_METMP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 RVKPVLG 10
R+KPV G
Sbjct: 37 RIKPVFG 43


>sp|SEPS_METM6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C6 /

Query: 4 RVKPVLG 10
R+KPV G
Sbjct: 37 RIKPVFG 43


>sp|CAPPA_PYRCJ|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 FRVKPVLG 10
R++P+LG
Sbjct: 219 LRIRPILG 226


>sp|T1M2_METJA|TYPE I restriction enzyme MjaVIII|Methanocaldococcus jannaschii

Query: 1 KIFRVKPV 8
KI+++KP+
Sbjct: 67 KIYKIKPL 74


>sp|RTCA_STAMF|RNA 3'-terminal phosphate cyclase|Staphylothermus marinus (strain ATCC

Query: 2 IFRVKPVLG 10
+ +VKP+LG
Sbjct: 167 VLKVKPLLG 175


>sp|RS3A_NANEQ|SMALL ribosomal subunit protein eS1|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 KIFRVKPVL 9
++ RVKPVL
Sbjct: 112 RLVRVKPVL 120


>sp|GATE_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina mazei (strain ATCC

Query: 1 KIFRVKPV 8
K+F +KPV
Sbjct: 107 KLFNMKPV 114


>sp|GATE_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina barkeri (strain Fusaro /

Query: 1 KIFRVKPV 8
K+F +KPV
Sbjct: 107 KLFNMKPV 114


>sp|GATE_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina acetivorans (strain ATCC

Query: 1 KIFRVKPV 8
K+F +KPV
Sbjct: 107 KLFNMKPV 114




27|Sequence|131|140|KPVLGIKRMI

>sp|PURQ_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Thermococcus kodakarensis (strain ATCC

Query: 1 KPVLGI 6
KPVLGI
Sbjct: 79 KPVLGI 84


>sp|PURQ_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KPVLGI 6
KPVLGI
Sbjct: 80 KPVLGI 85


>sp|PURQ_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanosarcina barkeri (strain Fusaro /

Query: 1 KPVLGI 6
KPVLGI
Sbjct: 80 KPVLGI 85


>sp|PURQ_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanosarcina acetivorans (strain ATCC

Query: 1 KPVLGI 6
KPVLGI
Sbjct: 80 KPVLGI 85


>sp|GUAAA_METHJ|GMP synthase [glutamine-hydrolyzing] subunit A|Methanospirillum

Query: 1 KPVLGI 6
KPVLGI
Sbjct: 69 KPVLGI 74


>sp|PURQ_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanothermobacter thermautotrophicus

Query: 1 KPVLGI 6
KPVLGI
Sbjct: 79 KPVLGI 84


>sp|PURQ_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KPVLGI 6
KPVLGI
Sbjct: 79 KPVLGI 84


>sp|RL14E_PYRAE|LARGE ribosomal subunit protein eL14|Pyrobaculum aerophilum (strain

Query: 1 KPVLGIKR 8
KP+ G+KR
Sbjct: 40 KPITGVKR 47


>sp|KAE1_NANEQ|TRNA N6-adenosine threonylcarbamoyltransferase|Nanoarchaeum equitans

Query: 1 KPVLGIKRMI 10
KPV+G+ ++
Sbjct: 99 KPVIGVNHIV 108


>sp|ASPD_METVS|L-ASPARTATE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KPVLGIKRMI 10
KPV+G+K I
Sbjct: 148 KPVMGLKDAI 157




28|Sequence|136|145|IKRMIQIEWI

>sp|MCRY_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IKRMIQIE 8
IKRM+QIE
Sbjct: 89 IKRMVQIE 96


>sp|COBD_PYRFU|PROBABLE cobalamin biosynthesis protein CobD|Pyrococcus furiosus (strain

Query: 1 IKRMIQIEWI 10
IKR +++ WI
Sbjct: 260 IKRALKVYWI 269


>sp|COBD_THEKO|PROBABLE cobalamin biosynthesis protein CobD|Thermococcus kodakarensis

Query: 1 IKRMIQIEWI 10
IKR ++I W+
Sbjct: 262 IKRALRIYWL 271


>sp|RIFK_METLZ|RIBOFLAVIN kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 KRMIQIEW 9
KRM +EW
Sbjct: 147 KRMDSLEW 154


>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 IKRMIQIEWI 10
++RM EW+
Sbjct: 354 LRRMFNPEWV 363




29|Sequence|141|150|QIEWIKPELA

>sp|ARGB_METB6|ACETYLGLUTAMATE kinase|Methanoregula boonei (strain DSM 21154

Query: 1 QIEWIKPEL 9
+IEWI P L
Sbjct: 153 EIEWIDPSL 161


>sp|Y1178_METTH|UPF0251 protein MTH_1178|Methanothermobacter thermautotrophicus (strain

Query: 1 QIEWIKPE 8
Q EWI PE
Sbjct: 105 QFEWISPE 112


>sp|RFCS2_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 3 EWIKPELA 10
E++KPELA
Sbjct: 278 EYVKPELA 285


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 1 QIEWIKPELA 10
+++W+ P+LA
Sbjct: 311 RVKWVSPDLA 320


>sp|MUTS1_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 3 EWIKPEL 9
+W++PEL
Sbjct: 568 QWVRPEL 574


>sp|MUTS1_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 3 EWIKPEL 9
+W++PEL
Sbjct: 568 QWVRPEL 574


>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 1 QIEWIKPELA 10
+++W+ P+LA
Sbjct: 312 RVKWVSPDLA 321


>sp|FEN_METBU|FLAP endonuclease 1|Methanococcoides burtonii (strain DSM 6242

Query: 1 QIEWIKPELA 10
+++WIKP+ A
Sbjct: 290 ELKWIKPDRA 299


>sp|SYFB_METTP|PHENYLALANINE--TRNA ligase beta subunit|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 EWIKPELA 10
EWI P+L+
Sbjct: 265 EWISPDLS 272


>sp|MER_METTH|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 IEWIKP 7
IEW+KP
Sbjct: 105 IEWVKP 110


>sp|AGO_METJA|PROTEIN argonaute|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QIEWIKPELA 10
++E++KPE+A
Sbjct: 89 KLEYVKPEIA 98


>sp|MER_METJA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IEWIKP 7
IEW+KP
Sbjct: 105 IEWVKP 110


>sp|MTHT_METTF|TYPE II methyltransferase M.MthTI|Methanothermobacter

Query: 2 IEWIKP 7
IEW+KP
Sbjct: 53 IEWLKP 58


>sp|Y1902_METTH|UPF0173 metal-dependent hydrolase MTH_1902|Methanothermobacter

Query: 4 WIKPE 8
WIKPE
Sbjct: 182 WIKPE 186


>sp|RPO7_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo7|Sulfolobus acidocaldarius (strain ATCC

Query: 1 QIEWIKPELA 10
+IEWI E+A
Sbjct: 170 KIEWINQEIA 179


>sp|FEN_METAR|FLAP endonuclease 1|Methanocella arvoryzae (strain DSM 22066

Query: 1 QIEWIKPELA 10
Q++W KPE A
Sbjct: 290 QVKWGKPEPA 299


>sp|MER_METTM|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 IEWIKP 7
IEW+KP
Sbjct: 105 IEWVKP 110


>sp|IDI2_AERPE|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Aeropyrum pernix (strain ATCC 700893

Query: 2 IEWIKPELA 10
+EWI ELA
Sbjct: 74 VEWINRELA 82


>sp|PUR2_METM5|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C5 /

Query: 3 EWIKPELA 10
E IKPELA
Sbjct: 61 EKIKPELA 68


>sp|RFCS2_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 EWIKPELA 10
E++KPE+A
Sbjct: 278 EYLKPEIA 285


>sp|RFCS2_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 EWIKPELA 10
E++KPE+A
Sbjct: 278 EYVKPEIA 285


>sp|Y178_METBF|UPF0284 protein Mbar_A0178|Methanosarcina barkeri (strain Fusaro /

Query: 2 IEWIKPEL 9
+ WI+PE+
Sbjct: 1 MSWIEPEV 8


>sp|Y1498_SULAC|PARB-LIKE protein Saci_1498|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QIEWIKPE 8
Q+EW+ P+
Sbjct: 5 QLEWVSPK 12


>sp|PMDHL_AERPE|PHOSPHOMEVALONATE dehydratase large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 3 EWIKPELA 10
EW KP +A
Sbjct: 186 EWRKPRVA 193


>sp|Y1196_THEGJ|DNA-BINDING protein TGAM_1196|Thermococcus gammatolerans (strain DSM 15229

Query: 1 QIEWIKPELA 10
+++ +KPELA
Sbjct: 59 RVKLVKPELA 68


>sp|Y1278_THEKO|DNA-BINDING protein TK1278|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QIEWIKPELA 10
+++ +KPELA
Sbjct: 59 RVKLVKPELA 68


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 2 IEWIKP 7
IEW+KP
Sbjct: 32 IEWLKP 37


>sp|COFG_METAC|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IEWIKPE 8
I+WI PE
Sbjct: 258 IDWINPE 264


>sp|Y1087_PYRFU|DNA-BINDING protein PF1087|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QIEWIKPELA 10
+++ +KPELA
Sbjct: 59 RVKLVKPELA 68


>sp|COFG_METMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IEWIKPE 8
I+WI PE
Sbjct: 264 IDWINPE 270


>sp|COFG_METBU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 IEWIKPE 8
I+WI PE
Sbjct: 268 IDWINPE 274


>sp|Y1374_SULTO|DNA-BINDING protein STK_13740|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IEWIKPELA 10
++ +KPELA
Sbjct: 57 VKLVKPELA 65


>sp|COFG_METBF|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 IEWIKPE 8
I+WI PE
Sbjct: 264 IDWINPE 270


>sp|RL10E_ARCFU|LARGE ribosomal subunit protein uL16|Archaeoglobus fulgidus (strain ATCC

Query: 4 WIKPE 8
W+KPE
Sbjct: 135 WVKPE 139


>sp|RECJ1_METJA|EXONUCLEASE RecJ1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QIEWIKPELA 10
+++W+KP A
Sbjct: 392 EVDWMKPIFA 401


>sp|IXTPA_ARCFU|DITP/XTP pyrophosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QIEWIKPE 8
+IEW+K E
Sbjct: 24 EIEWLKME 31


>sp|TRPF_THEKO|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IEWIKP 7
I W+KP
Sbjct: 173 IRWVKP 178




30|Sequence|146|155|KPELAPVSSD

>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KPELAPV 7
KP+LAPV
Sbjct: 603 KPQLAPV 609


>sp|RPO3_PYRCJ|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum calidifontis (strain DSM

Query: 1 KPELAPVSSD 10
+P++APV D
Sbjct: 116 RPDVAPVYKD 125




31|Sequence|151|160|PVSSDLKYTL

>sp|Y1614_METJA|UNCHARACTERIZED protein MJ1614|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SSDLKYTL 10
S DLKYTL
Sbjct: 52 SYDLKYTL 59


>sp|GLMS_METMP|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanococcus maripaludis (strain

Query: 1 PVSSDLKYTL 10
PV +LKY++
Sbjct: 544 PVEDNLKYSI 553


>sp|CDC61_METMA|ORC1-TYPE DNA replication protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VSSDLKYT 9
VS+DLK+T
Sbjct: 185 VSNDLKFT 192


>sp|CDC61_METAC|ORC1-TYPE DNA replication protein 1|Methanosarcina acetivorans (strain ATCC

Query: 2 VSSDLKYT 9
VS+DLK+T
Sbjct: 185 VSNDLKFT 192


>sp|HPRT_METFV|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermus fervidus (strain ATCC

Query: 2 VSSDLKYTL 10
+S+D+KY +
Sbjct: 141 ISADIKYVI 149


>sp|Y1602_METBF|UNCHARACTERIZED protein Mbar_A1602|Methanosarcina barkeri (strain Fusaro /

Query: 1 PVSSDLKYT 9
P+S ++KY+
Sbjct: 61 PISKEVKYS 69




32|Sequence|156|165|LKYTLRFRTV

>sp|RNZ_THEVO|RIBONUCLEASE Z|Thermoplasma volcanium (strain ATCC 51530

Query: 3 YTLRFR 8
YTLRFR
Sbjct: 110 YTLRFR 115


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKYTLRF 7
+KYTLR+
Sbjct: 822 IKYTLRY 828


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LKYTLRF 7
+KYTLR+
Sbjct: 827 VKYTLRY 833


>sp|GPDA_ARCFU|NADP(+)-DEPENDENT glycerol-3-phosphate dehydrogenase|Archaeoglobus fulgidus (strain

Query: 1 LKYTLRFRTV 10
LK+ LR RTV
Sbjct: 124 LKHDLRERTV 133


>sp|RS24_THEVO|SMALL ribosomal subunit protein eS24|Thermoplasma volcanium (strain

Query: 1 LKYTLRF 7
LKYTL+F
Sbjct: 20 LKYTLKF 26




33|Sequence|161|170|RFRTVNSTSW

>sp|DP2S_THEAC|DNA polymerase II small subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 RTVNSTSW 10
R VNS++W
Sbjct: 443 RYVNSSTW 450


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 2 FRTVNSTSW 10
+RT N T+W
Sbjct: 275 YRTENETAW 283


>sp|RFCL_METST|REPLICATION factor C large subunit|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 FRTVNSTSW 10
FRT N T W
Sbjct: 294 FRTQNYTYW 302


>sp|WTPA_METJA|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 VNSTSW 10
+NST+W
Sbjct: 134 INSTNW 139




34|Sequence|166|175|NSTSWMEVNF

>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 1 NSTSWME 7
N TSWM+
Sbjct: 130 NGTSWMD 136


>sp|COMB_THEAC|PROBABLE 2-phosphosulfolactate phosphatase|Thermoplasma acidophilum

Query: 2 STSWMEVN 9
S SW E+N
Sbjct: 10 SDSWAEIN 17


>sp|G1PDH_METTP|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothrix thermoacetophila (strain DSM

Query: 2 STSWMEV 8
S SWME+
Sbjct: 8 SASWMEL 14


>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NSTSWM 6
N+TSWM
Sbjct: 99 NTTSWM 104


>sp|HELS_METMA|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NSTSWME 7
N T+WM+
Sbjct: 130 NETAWMQ 136


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NSTSWME 7
N T+WM+
Sbjct: 130 NETAWMQ 136


>sp|HIS1_PYRAE|ATP phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC

Query: 3 TSWMEVNF 10
TSW +VN
Sbjct: 38 TSWSDVNL 45


>sp|HIS1_PYRCJ|ATP phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 3 TSWMEVN 9
TSW +VN
Sbjct: 38 TSWRDVN 44


>sp|HIS1_PYRNV|ATP phosphoribosyltransferase|Pyrobaculum neutrophilum (strain DSM

Query: 3 TSWMEVNF 10
TSW +VN
Sbjct: 38 TSWPDVNL 45


>sp|HIS1_PYRIL|ATP phosphoribosyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 TSWMEVN 9
TSW +VN
Sbjct: 38 TSWNDVN 44


>sp|WTPA_METJA|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NSTSWMEV 8
NST+W ++
Sbjct: 135 NSTNWYKI 142


>sp|HAH4_HALMT|HALOCIN-H4 mediterranei (strain ATCC 33500

Query: 5 WMEVNF 10
W E+NF
Sbjct: 135 WQEINF 140




35|Sequence|171|180|MEVNFAKNRK

>sp|FRHA_METJA|COENZYME F420 hydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 MEVNFAKNR 9
MEVNF NR
Sbjct: 1 MEVNFVTNR 9




36|Sequence|176|185|AKNRKDKNQT

>sp|Y79B_METJA|UNCHARACTERIZED protein MJ0795.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 KDKNQT 10
KDKNQT
Sbjct: 148 KDKNQT 153




37|Sequence|181|190|DKNQTYNLTG

>sp|SURE_METS3|5'-NUCLEOTIDASE SurE|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DKNQTYNLTG 10
DK+Q Y +TG
Sbjct: 60 DKSQAYGVTG 69


>sp|SCAF_METTH|DUF35 domain-containing scaffold protein|Methanothermobacter

Query: 4 QTYNLTG 10
Q YNLTG
Sbjct: 14 QRYNLTG 20


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DKNQTYNLT 9
+ N+TYNLT
Sbjct: 551 EMNKTYNLT 559


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 DKNQTYNL 8
DK TYNL
Sbjct: 107 DKKYTYNL 114


>sp|NAC_METM5|NASCENT polypeptide-associated complex protein|Methanococcus maripaludis

Query: 3 NQTYNLTG 10
N+TY++TG
Sbjct: 59 NKTYSITG 66


>sp|NAC_METM7|NASCENT polypeptide-associated complex protein|Methanococcus maripaludis

Query: 3 NQTYNLTG 10
N+TY++TG
Sbjct: 59 NKTYSITG 66


>sp|BACR_HALSR|CRUXRHODOPSIN-2 sp. (strain arg-2 /

Query: 1 DKNQTYNLTG 10
D+N Y+L G
Sbjct: 109 DRNTIYSLVG 118


>sp|RADB_METTH|DNA repair and recombination protein|Methanothermobacter

Query: 3 NQTYNLTG 10
NQ Y++TG
Sbjct: 167 NQIYSITG 174


>sp|NAC_METM6|NASCENT polypeptide-associated complex protein|Methanococcus maripaludis

Query: 3 NQTYNLTG 10
N+TY++TG
Sbjct: 59 NKTYSITG 66


>sp|NAC_METMP|NASCENT polypeptide-associated complex protein|Methanococcus maripaludis

Query: 3 NQTYNLTG 10
N+TY++TG
Sbjct: 59 NKTYSITG 66


>sp|NAC_META3|NASCENT polypeptide-associated complex protein|Methanococcus aeolicus

Query: 3 NQTYNLTG 10
N+TY +TG
Sbjct: 57 NKTYTITG 64


>sp|NURA_SACS2|DNA double-strand break repair nuclease|Saccharolobus solfataricus

Query: 2 KNQTYNL 8
KNQ YN+
Sbjct: 17 KNQIYNI 23


>sp|MFND_METFA|TYRAMINE--L-GLUTAMATE ligase|Methanocaldococcus fervens (strain DSM 4213

Query: 1 DKNQTYNLT 9
D+N YNLT
Sbjct: 91 DENILYNLT 99




38|Sequence|186|195|YNLTGLQPFT

>sp|HUTH_THEVO|PROBABLE histidine ammonia-lyase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 NLTGLQPF 9
NL+GL PF
Sbjct: 358 NLSGLPPF 365


>sp|HUTH_THEAC|PROBABLE histidine ammonia-lyase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 NLTGLQPF 9
NL+GL PF
Sbjct: 358 NLSGLPPF 365


>sp|PYRDB_METAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanosarcina acetivorans

Query: 1 YNLTGLQ 7
YNLTGL+
Sbjct: 12 YNLTGLE 18


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 TGLQPFT 10
TGL PFT
Sbjct: 678 TGLDPFT 684


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 TGLQPFT 10
TGL PFT
Sbjct: 560 TGLDPFT 566


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 1 YNLTGLQPF 9
Y+LT ++PF
Sbjct: 438 YDLTQIEPF 446


>sp|DNAK_THEVO|CHAPERONE protein DnaK|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YNLTGLQP 8
+NLTG+ P
Sbjct: 434 FNLTGIAP 441


>sp|DNAK_THEAC|CHAPERONE protein DnaK|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YNLTGLQP 8
+NLTG+ P
Sbjct: 433 FNLTGIAP 440


>sp|COPP_THEAC|BIFUNCTIONAL phosphopantetheine adenylyltransferase/NTP phosphatase|Thermoplasma

Query: 1 YNLTGLQPF 9
YNL QPF
Sbjct: 185 YNLKTQQPF 193


>sp|PCP_PYRHO|PYRROLIDONE-CARBOXYLATE peptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LTGLQPF 9
LTG +PF
Sbjct: 5 LTGFEPF 11


>sp|Y1033_SACS2|KELCH domain-containing protein SSO1033|Saccharolobus solfataricus

Query: 1 YNLTGLQPFT 10
YN TG+ P+
Sbjct: 108 YNSTGINPYV 117


>sp|MTAP_PYRAE|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 GLQPFT 10
GL+PFT
Sbjct: 146 GLEPFT 151


>sp|SODF_ACIAM|SUPEROXIDE dismutase [Fe]|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 YNLTGLQPF 9
YNL L+P+
Sbjct: 17 YNLDALEPY 25


>sp|NIKMN_ARCFU|PUTATIVE fused nickel transport protein|Archaeoglobus fulgidus (strain ATCC

Query: 1 YNLTGLQPF 9
Y L GL P+
Sbjct: 259 YTLPGLDPY 267




39|Sequence|191|200|LQPFTEYVIA

>sp|PYRC_METTH|DIHYDROOROTASE thermautotrophicus (strain ATCC 29096

Query: 1 LQPFTEYV 8
++PF EYV
Sbjct: 233 VEPFREYV 240


>sp|PRIS_SACI7|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 LQPFTEYVI 9
L PFT Y I
Sbjct: 275 LSPFTGYTI 283


>sp|PRIS_SACI6|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.16.4

Query: 1 LQPFTEYVI 9
L PFT Y I
Sbjct: 275 LSPFTGYTI 283


>sp|PRIS_SACI4|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.14.25

Query: 1 LQPFTEYVI 9
L PFT Y I
Sbjct: 275 LSPFTGYTI 283


>sp|PRIS_SACI3|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 LQPFTEYVI 9
L PFT Y I
Sbjct: 275 LSPFTGYTI 283


>sp|PRIS_SACI2|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 LQPFTEYVI 9
L PFT Y I
Sbjct: 275 LSPFTGYTI 283


>sp|PRIS_SACI1|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 LQPFTEYVI 9
L PFT Y I
Sbjct: 275 LSPFTGYTI 283


>sp|PRIS_SACS2|DNA primase small subunit PriS|Saccharolobus solfataricus (strain ATCC

Query: 1 LQPFTEYVI 9
L PFT Y I
Sbjct: 275 LSPFTGYTI 283


>sp|CPGS_METTH|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermobacter

Query: 1 LQPFTEYVI 9
QP TEY I
Sbjct: 126 FQPLTEYDI 134


>sp|LADH_METM7|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 LQPFTEYVI 9
L+ FT+Y+I
Sbjct: 287 LETFTKYII 295


>sp|ALBA_PYRCJ|DNA/RNA-BINDING protein Alba|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 QPFTEYVIA 10
+P T YVIA
Sbjct: 12 KPTTNYVIA 20


>sp|ALBA_PYRIL|DNA/RNA-BINDING protein Alba|Pyrobaculum islandicum (strain DSM 4184

Query: 2 QPFTEYVIA 10
+P T YVIA
Sbjct: 12 KPTTNYVIA 20


>sp|ALBA_PYRAE|DNA/RNA-BINDING protein Alba|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 QPFTEYVIA 10
+P T YVIA
Sbjct: 12 KPTTNYVIA 20


>sp|ALBA_PYRNV|DNA/RNA-BINDING protein Alba|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 QPFTEYVIA 10
+P T YVIA
Sbjct: 12 KPATNYVIA 20


>sp|DCD_CALMQ|DCTP deaminase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LQPFTEYVI 9
++PFTE V+
Sbjct: 19 IEPFTEDVV 27


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 LQPFTEYV 8
L PFT Y+
Sbjct: 788 LAPFTPYI 795


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 PFTEYVI 9
PF EYV+
Sbjct: 13 PFDEYVL 19




40|Sequence|196|205|EYVIALRCAV

>sp|KAD6_METJA|PUTATIVE adenylate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EYVIALRC 8
+Y+I LRC
Sbjct: 85 DYIIVLRC 92


>sp|HYPA_METAC|HYDROGENASE maturation factor HypA|Methanosarcina acetivorans (strain ATCC

Query: 1 EYVIALRCAV 10
EY+ AL C V
Sbjct: 98 EYIAALECPV 107




41|Sequence|201|210|LRCAVKESKF

>sp|Y1027_METJA|UNCHARACTERIZED protein MJ1027|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RCAVKESK 9
RC +KESK
Sbjct: 163 RCNIKESK 170


>sp|KHSE_SULAC|HOMOSERINE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RCAVKESK 9
+C VKE+K
Sbjct: 288 KCLVKEAK 295




42|Sequence|206|215|KESKFWSDWS

>sp|TAL_PICTO|PROBABLE transaldolase|Picrophilus torridus (strain ATCC 700027

Query: 3 SKFWSDW 9
SKF SDW
Sbjct: 206 SKFLSDW 212


>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 ESKFWSDW 9
+ K W DW
Sbjct: 49 QGKLWPDW 56


>sp|CYDK_THEKO|CYTIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 KFWSDWS 10
K W DWS
Sbjct: 269 KKWGDWS 275


>sp|OFOB1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Aeropyrum pernix (strain ATCC

Query: 3 SKFWSDW 9
++ WSDW
Sbjct: 11 TEVWSDW 17


>sp|Y1633_ARCFU|UNCHARACTERIZED protein AF_1633|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KFWSD 8
KFWSD
Sbjct: 147 KFWSD 151


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 ESKFWSDW 9
+ K W DW
Sbjct: 48 QGKLWPDW 55


>sp|TAL_METMP|PROBABLE transaldolase|Methanococcus maripaludis (strain DSM 14266

Query: 3 SKFWSDW 9
+KF SDW
Sbjct: 203 AKFLSDW 209


>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 ESKFWSDW 9
+ + W DW
Sbjct: 46 QGRLWPDW 53


>sp|SOR_ACIAM|SULFUR oxygenase/reductase|Acidianus ambivalens (Desulfurolobus

Query: 5 FWSDW 9
FW DW
Sbjct: 79 FWKDW 83


>sp|THIL_METHJ|THIAMINE-MONOPHOSPHATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 ESKFWSD 8
+S+FW D
Sbjct: 161 DSRFWKD 167


>sp|PELO_METST|PROTEIN pelota homolog|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 KFWSDWS 10
K W+ WS
Sbjct: 114 KIWNKWS 120


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 FWSDWS 10
+WS WS
Sbjct: 791 YWSTWS 796


>sp|Y3021_SACS2|UNCHARACTERIZED protein SSO3021|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 FWSDW 9
FW++W
Sbjct: 121 FWANW 125


>sp|Y273_METTH|UPF0098 protein MTH_273|Methanothermobacter thermautotrophicus (strain

Query: 3 SKFWSDW 9
SK W+ W
Sbjct: 52 SKVWTHW 58




43|Sequence|211|220|WSDWSQEKMG

>sp|DNLI_METLZ|DNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 WSDWSQEKMG 10
+ DWS EK+G
Sbjct: 50 FPDWSSEKLG 59


>sp|TDXH_HYPBU|PEROXIREDOXIN butylicus (strain DSM 5456

Query: 1 WSDWSQEKMG 10
W++W +EK+G
Sbjct: 83 WAEWIKEKLG 92


>sp|G1PDH_IGNH4|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 WSDWSQEKMG 10
WS+W E G
Sbjct: 46 WSEWGDELQG 55


>sp|DNLI_METB6|DNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 WSDWSQEKMG 10
+ DWS +K+G
Sbjct: 50 FPDWSAQKLG 59


>sp|DNLI_METPE|DNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 WSDWSQEKMG 10
+ DWS +K+G
Sbjct: 50 FPDWSPQKLG 59


>sp|TDH_THEON|L-THREONINE 3-dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 1 WSDWSQEKM 9
W++W+Q ++
Sbjct: 51 WNEWAQSRI 59


>sp|DNLI_METMJ|DNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 WSDWSQEKMG 10
+ DWS +K+G
Sbjct: 50 FPDWSTKKLG 59


>sp|TDH_THEKO|L-THREONINE 3-dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WSDWSQEKM 9
W++W+Q ++
Sbjct: 51 WNEWAQSRI 59


>sp|TDH_PYRHO|L-THREONINE 3-dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WSDWSQEKM 9
W++W+Q ++
Sbjct: 51 WNEWAQSRI 59


>sp|TDH_PYRAB|L-THREONINE 3-dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 WSDWSQEKM 9
W++W+Q ++
Sbjct: 51 WNEWAQSRI 59


>sp|TDH_PYRFU|L-THREONINE 3-dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WSDWSQEKM 9
W++W+Q ++
Sbjct: 51 WNEWAQTRI 59


>sp|PELO_METST|PROTEIN pelota homolog|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 WSDWSQEKM 9
W+ WS E++
Sbjct: 116 WNKWSLERL 124


>sp|TDXH_STAMF|PEROXIREDOXIN marinus (strain ATCC 43588

Query: 1 WSDWSQEKMG 10
W +W +EK+G
Sbjct: 83 WIEWIKEKLG 92


>sp|TDXH_PYRFU|PEROXIREDOXIN furiosus (strain ATCC 43587

Query: 1 WSDWSQEKMG 10
W +W +EK+G
Sbjct: 81 WMEWIKEKLG 90


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 1 WSDWSQ 6
W+DW Q
Sbjct: 121 WADWEQ 126


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 1 WSDWSQ 6
W+DW Q
Sbjct: 121 WADWEQ 126


>sp|CYDK_THEKO|CYTIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WSDWS 5
W DWS
Sbjct: 271 WGDWS 275


>sp|TDXH_IGNH4|PEROXIREDOXIN hospitalis (strain KIN4/I /

Query: 1 WSDWSQEKM 9
W +W +EK+
Sbjct: 83 WKEWIKEKL 91


>sp|RL5_NANEQ|LARGE ribosomal subunit protein uL5|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 WSQEKMG 10
W+QE++G
Sbjct: 159 WAQEELG 165


>sp|DNAG_IGNH4|DNA primase DnaG|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 WSQEK 8
WSQEK
Sbjct: 123 WSQEK 127


>sp|Y1841_ARCFU|PUTATIVE ABC transporter ATP-binding protein|Archaeoglobus fulgidus (strain

Query: 3 DWSQEKM 9
+WS+E+M
Sbjct: 112 EWSEEEM 118


>sp|RL10_METST|LARGE ribosomal subunit protein uL10|Methanosphaera stadtmanae (strain

Query: 2 SDWSQEKMG 10
+DW +EK+
Sbjct: 5 ADWKKEKVA 13


>sp|DNAG_SACS2|DNA primase DnaG|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SDWSQEK 8
S WS+EK
Sbjct: 125 SSWSKEK 131


>sp|DNAG_SACI7|DNA primase DnaG|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 SDWSQEK 8
S WS+EK
Sbjct: 121 SSWSKEK 127


>sp|DNAG_SACI6|DNA primase DnaG|Saccharolobus islandicus (strain M.16.4 /

Query: 2 SDWSQEK 8
S WS+EK
Sbjct: 121 SSWSKEK 127


>sp|DNAG_SACI4|DNA primase DnaG|Saccharolobus islandicus (strain M.14.25 /

Query: 2 SDWSQEK 8
S WS+EK
Sbjct: 121 SSWSKEK 127


>sp|DNAG_SACI3|DNA primase DnaG|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 SDWSQEK 8
S WS+EK
Sbjct: 121 SSWSKEK 127


>sp|DNAG_SACI2|DNA primase DnaG|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 SDWSQEK 8
S WS+EK
Sbjct: 121 SSWSKEK 127


>sp|DNAG_SACI1|DNA primase DnaG|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 SDWSQEK 8
S WS+EK
Sbjct: 121 SSWSKEK 127


>sp|DNLI_METAR|DNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 WSDWSQEKMG 10
+ +W Q K+G
Sbjct: 50 FPEWDQRKIG 59


>sp|DHE2_SACS2|GLUTAMATE dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WSDWSQEKMG 10
+ +W+ KMG
Sbjct: 353 YVEWANNKMG 362


>sp|KAD6_ARCFU|PUTATIVE adenylate kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DWSQEKM 9
+WS+EK+
Sbjct: 96 NWSEEKL 102


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WSDWSQEKMG 10
W+ W+Q K G
Sbjct: 394 WTGWNQYKNG 403


>sp|DTDA_HALWD|D-AMINOACYL-TRNA deacylase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 SDWSQEKMG 10
+DW+ + MG
Sbjct: 215 ADWALDSMG 223


>sp|DYR2_HALMA|DIHYDROFOLATE reductase 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 WSDWSQ 6
WS+W++
Sbjct: 140 WSNWTE 145


>sp|GGR_METJA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SDWSQEKM 9
+DWS+E +
Sbjct: 313 NDWSEETL 320


>sp|TDXH_METM5|PEROXIREDOXIN maripaludis (strain C5 /

Query: 1 WSDWSQEKM 9
W +W +EK+
Sbjct: 81 WVEWIKEKL 89


>sp|TDXH_ARCFU|PEROXIREDOXIN fulgidus (strain ATCC 49558

Query: 1 WSDWSQEKM 9
W +W +EK+
Sbjct: 80 WIEWIKEKL 88


>sp|TDXH_METVS|PEROXIREDOXIN vannielii (strain ATCC 35089

Query: 1 WSDWSQEKM 9
W +W +EK+
Sbjct: 81 WVEWIKEKL 89


>sp|TDXH_METMP|PEROXIREDOXIN maripaludis (strain DSM 14266

Query: 1 WSDWSQEKM 9
W +W +EK+
Sbjct: 81 WVEWIKEKL 89


>sp|TDXH_METJA|PEROXIREDOXIN jannaschii (strain ATCC 43067

Query: 1 WSDWSQEKM 9
W +W +EK+
Sbjct: 81 WVEWIKEKL 89




44|Sequence|216|225|QEKMGMTEEE

>sp|RL30_PYRAB|LARGE ribosomal subunit protein uL30|Pyrococcus abyssi (strain GE5 /

Query: 1 QEKMGMTEEE 10
+EK+GMT EE
Sbjct: 86 KEKLGMTIEE 95


>sp|RL30_PYRFU|LARGE ribosomal subunit protein uL30|Pyrococcus furiosus (strain ATCC

Query: 1 QEKMGMTEEE 10
+EK+GMT EE
Sbjct: 86 KEKLGMTIEE 95


>sp|RL30_PYRHO|LARGE ribosomal subunit protein uL30|Pyrococcus horikoshii (strain ATCC

Query: 1 QEKMGMTEEE 10
+EK+GMT EE
Sbjct: 86 KEKLGMTIEE 95


>sp|TRMY_METBU|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcoides

Query: 2 EKMGMTEEE 10
+ MG+TEEE
Sbjct: 153 DHMGVTEEE 161


>sp|Y1793_ARCFU|UNCHARACTERIZED HTH-type transcriptional regulator AF_1793|Archaeoglobus fulgidus

Query: 1 QEKMGMTEEE 10
+ K GMT+EE
Sbjct: 9 RAKYGMTQEE 18


>sp|RL30_THEKO|LARGE ribosomal subunit protein uL30|Thermococcus kodakarensis (strain

Query: 1 QEKMGMTEEE 10
+EK+GMT EE
Sbjct: 86 KEKLGMTIEE 95




45|Sequence|221|230|MTEEEAPCGL

>sp|RNH2_THEAC|RIBONUCLEASE HII|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MTEEEAPCGL 10
MTE E CG+
Sbjct: 1 MTESERQCGI 10


>sp|Y838_METJA|UNCHARACTERIZED protein MJ0838|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 EAPCG 9
EAPCG
Sbjct: 157 EAPCG 161


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 MTEEEAPCGL 10
+ EEEAP G+
Sbjct: 599 IKEEEAPTGV 608


>sp|TYSY_METKA|PUTATIVE thymidylate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 MTEEEAPC 8
+ EEE PC
Sbjct: 130 LDEEEVPC 137


>sp|PYRDB_PYRFU|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus furiosus (strain

Query: 5 EAPCGL 10
E PCGL
Sbjct: 61 EVPCGL 66


>sp|Y078_METHJ|UPF0212 protein Mhun_0078|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 EEEAPCGL 10
EEE PC L
Sbjct: 55 EEELPCTL 62


>sp|QUEC_METAC|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 EEAPCG 9
EE PCG
Sbjct: 199 EETPCG 204




46|Sequence|226|235|APCGLELWRV

>sp|Y405_HALVD|PROBABLE cell surface fusion protein|Haloferax volcanii (strain ATCC 29605

Query: 1 APCGLELWRV 10
P G+ELW V
Sbjct: 300 GPSGVELWDV 309


>sp|MPTA_METKA|GTP cyclohydrolase MptA|Methanopyrus kandleri (strain AV19 /

Query: 2 PCGLELWR 9
PC LE+ R
Sbjct: 165 PCALEMMR 172


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 APCGLELW 8
AP G E+W
Sbjct: 10 APTGREIW 17


>sp|MCRW_METFV|METHYL-COENZYME M reductase II operon|Methanothermus fervidus (strain ATCC 43054

Query: 2 PCGLELW 8
PC ++W
Sbjct: 112 PCSYQMW 118


>sp|SYR_KORCO|ARGININE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 5 LELWRV 10
LE+WR+
Sbjct: 207 LEIWRI 212


>sp|SERC_METBF|PHOSPHOSERINE aminotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 APCGLELW 8
AP GL +W
Sbjct: 338 APSGLRIW 345


>sp|SERC_METAC|PHOSPHOSERINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 APCGLELW 8
AP GL +W
Sbjct: 338 APSGLRIW 345


>sp|SERC_METMA|PHOSPHOSERINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 APCGLELW 8
AP GL +W
Sbjct: 338 APSGLRIW 345


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 CGLELWR 9
CG + WR
Sbjct: 145 CGFDYWR 151


>sp|AROK_PYRAB|SHIKIMATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 APCGLELW 8
A G+ELW
Sbjct: 23 AAIGIELW 30




47|Sequence|231|240|ELWRVLKPAE

>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 2 LWRVLKPAE 10
LW LKPAE
Sbjct: 464 LWDDLKPAE 472


>sp|Y083_ARCFU|UNCHARACTERIZED protein AF_0083|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WRVLKPAE 10
WRVLK AE
Sbjct: 53 WRVLKTAE 60


>sp|Y1233_METJA|UNCHARACTERIZED protein MJ1233|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ELWRVLKPA 9
E++RVLKP
Sbjct: 229 EIFRVLKPG 237


>sp|T1R2_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 LWRVLKPAE 10
+WRV+KP +
Sbjct: 473 IWRVVKPED 481


>sp|SYC_METMP|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LWRVLKPAE 10
LW+ KP E
Sbjct: 182 LWKTAKPGE 190


>sp|SYC_METM7|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 LWRVLKPAE 10
LW+ KP E
Sbjct: 182 LWKTAKPGE 190


>sp|SYC_METM6|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 LWRVLKPAE 10
LW+ KP E
Sbjct: 182 LWKTAKPGE 190


>sp|TRUB_METJA|PROBABLE tRNA pseudouridine synthase B|Methanocaldococcus jannaschii (strain

Query: 1 ELWRVLKPAE 10
EL RV+KP E
Sbjct: 233 ELRRVIKPME 242


>sp|PORD_PYRHO|PYRUVATE synthase subunit PorD|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 WRVLKP 8
WRV KP
Sbjct: 41 WRVFKP 46


>sp|PORD_PYRFU|PYRUVATE synthase subunit PorD|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WRVLKP 8
WRV KP
Sbjct: 41 WRVFKP 46


>sp|ARSM_METAC|ARSENITE methyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ELWRVLKPA 9
E +RVLKP
Sbjct: 164 EAFRVLKPG 172


>sp|SYC_METS5|CYSTEINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 LWRVLKPAE 10
LW+ KP E
Sbjct: 178 LWKAYKPGE 186


>sp|SYC_META3|CYSTEINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LWRVLKPAE 10
LW+ KP E
Sbjct: 181 LWKFAKPDE 189


>sp|SYC_SULAC|CYSTEINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LWRVLKPAE 10
LW+ KP E
Sbjct: 182 LWKAWKPGE 190


>sp|SYC_SACS2|CYSTEINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LWRVLKPAE 10
LW+ KP E
Sbjct: 183 LWKAWKPGE 191


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 ELWRVLK 7
+LWRVLK
Sbjct: 547 KLWRVLK 553


>sp|Y289_METJA|UNCHARACTERIZED protein MJ0289|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LWRVLKP 8
LW+ LKP
Sbjct: 298 LWQPLKP 304


>sp|SYC_SULTO|CYSTEINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LWRVLKPAE 10
LW+ KP E
Sbjct: 181 LWKAWKPGE 189


>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LWRVLKPAE 10
LW+ KP E
Sbjct: 181 LWKAAKPGE 189


>sp|Y405_HALVD|PROBABLE cell surface fusion protein|Haloferax volcanii (strain ATCC 29605

Query: 1 ELWRVLKPA 9
ELW V PA
Sbjct: 305 ELWDVTDPA 313


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LWRVLKPAE 10
LW+ KP E
Sbjct: 181 LWKKRKPGE 189


>sp|TRUB_METMA|PROBABLE tRNA pseudouridine synthase B|Methanosarcina mazei (strain ATCC

Query: 1 ELWRVLKPAE 10
EL RV++P E
Sbjct: 230 ELRRVIRPME 239


>sp|CREN1_PYRCJ|CRENACTIN calidifontis (strain DSM 21063

Query: 1 ELWRVLK 7
E WRVLK
Sbjct: 99 EAWRVLK 105


>sp|TRUB_METAC|PROBABLE tRNA pseudouridine synthase B|Methanosarcina acetivorans (strain

Query: 1 ELWRVLKPAE 10
EL RV++P E
Sbjct: 230 ELRRVIRPME 239


>sp|SYC_IGNH4|CYSTEINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LWRVLKPAE 10
LW+ KP E
Sbjct: 179 LWKCAKPGE 187


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 LWRVLKPAE 10
LW+ KP E
Sbjct: 180 LWKARKPGE 188




48|Sequence|236|245|LKPAEADGRR

>sp|LYSY_SULTO|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LKPAEADGRR 10
++P EADG R
Sbjct: 201 IRPYEADGHR 210


>sp|BIOD_METJA|ATP-DEPENDENT dethiobiotin synthetase BioD|Methanocaldococcus jannaschii

Query: 1 LKPAEADGR 9
LKP E GR
Sbjct: 34 LKPVETGGR 42


>sp|RTCA_HYPBU|RNA 3'-terminal phosphate cyclase|Hyperthermus butylicus (strain DSM

Query: 2 KPAEADGR 9
KPAEA GR
Sbjct: 265 KPAEAVGR 272


>sp|RTCA_THEON|RNA 3'-terminal phosphate cyclase|Thermococcus onnurineus (strain NA1)

Query: 2 KPAEADGR 9
KPAEA GR
Sbjct: 258 KPAEAVGR 265


>sp|RTCA_PYRCJ|RNA 3'-terminal phosphate cyclase|Pyrobaculum calidifontis (strain DSM

Query: 2 KPAEADGR 9
KPAEA GR
Sbjct: 259 KPAEAVGR 266


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LKPAEAD 7
LKP EAD
Sbjct: 408 LKPGEAD 414


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LKPAEAD 7
LKP EAD
Sbjct: 410 LKPGEAD 416


>sp|LYSY_SACS2|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LKPAEADGRR 10
++P EA+G R
Sbjct: 204 IRPYEAEGHR 213


>sp|LYSY_SULAC|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LKPAEADGRR 10
++P EA+G R
Sbjct: 201 IRPYEAEGHR 210


>sp|ILVC_NITMS|KETOL-ACID reductoisomerase (NADP(+))|Nitrosopumilus maritimus (strain SCM1)

Query: 2 KPAEADGRR 10
K AEADG +
Sbjct: 55 KKAEADGHK 63


>sp|SYY_PYRAR|TYROSINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 PAEADGRR 10
P E DG+R
Sbjct: 209 PLEVDGKR 216


>sp|AOCD_METKA|ORNITHINE cyclodeaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 LKPAEADG 8
L+PA ADG
Sbjct: 85 LEPAPADG 92




49|Sequence|241|250|ADGRRPVRLL

>sp|Y1076_METJA|UNCHARACTERIZED ATP-binding protein MJ1076|Methanocaldococcus jannaschii (strain

Query: 2 DGRRPVRLL 10
DG+RPV ++
Sbjct: 125 DGKRPVLVI 133


>sp|MPTA_METTH|GTP cyclohydrolase MptA|Methanothermobacter thermautotrophicus

Query: 2 DGRRPVRLL 10
+GRRP+ LL
Sbjct: 37 EGRRPIILL 45


>sp|ASPD_METTH|L-ASPARTATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 DGRRPVRL 9
DGR PV+L
Sbjct: 24 DGRVPVKL 31


>sp|CHER_HALS3|CHEMOTAXIS protein methyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 ADGRRPVRL 9
ADGR P L
Sbjct: 104 ADGREPYSL 112


>sp|MPTA_HALVD|GTP cyclohydrolase MptA|Haloferax volcanii (strain ATCC 29605

Query: 2 DGRRPVRLL 10
DG+RP+ L+
Sbjct: 36 DGKRPLVLM 44


>sp|TMCA_HALMA|TRNA(MET) cytidine acetyltransferase TmcA|Haloarcula marismortui (strain ATCC

Query: 2 DGRRPVRL 9
DG RPV L
Sbjct: 665 DGERPVSL 672




50|Sequence|246|255|PVRLLWKKAR

>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 1 PVRLLWKKAR 10
P +LW +AR
Sbjct: 549 PCAILWSRAR 558


>sp|Y1695_PYRFU|UNCHARACTERIZED lipoprotein PF1695|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PVRLLWK 7
PV+LLW+
Sbjct: 194 PVKLLWQ 200


>sp|Y452_PYRAB|UNCHARACTERIZED lipoprotein PYRAB04520|Pyrococcus abyssi (strain GE5 /

Query: 1 PVRLLWK 7
PV+LLW+
Sbjct: 197 PVKLLWQ 203


>sp|HFLX_THEKO|GTPASE HflX|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VRLLWKKAR 10
VRL+W+ AR
Sbjct: 320 VRLIWELAR 328


>sp|Y1153_METTH|UNCHARACTERIZED protein MTH_1153|Methanothermobacter thermautotrophicus (strain

Query: 6 WKKAR 10
WKKAR
Sbjct: 342 WKKAR 346


>sp|SYC_THEON|CYSTEINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 5 LWKKAR 10
LWKKA+
Sbjct: 183 LWKKAK 188


>sp|SYC_PYRFU|CYSTEINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 LWKKAR 10
LWKKA+
Sbjct: 182 LWKKAK 187


>sp|SYC_THEKO|CYSTEINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 LWKKAR 10
LWKKA+
Sbjct: 183 LWKKAK 188


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 PVRLLW 6
PVR LW
Sbjct: 647 PVRTLW 652




51|Sequence|251|260|WKKARGAPVL

>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 WKKARGAPVL 10
W RG PVL
Sbjct: 5928 WNTTRGYPVL 5937


Query: 1 WKKARGAPVL 10
W RG PVL
Sbjct: 3533 WNVTRGYPVL 3542


Query: 1 WKKARGAPVL 10
W RG PVL
Sbjct: 4933 WNVTRGYPVL 4942


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 2 KKARGAPV 9
KKA+G P+
Sbjct: 902 KKAKGGPI 909


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 1 WKKARGAP 8
W+ RGAP
Sbjct: 17 WQAYRGAP 24


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 1 WKKARGAP 8
W+ RGAP
Sbjct: 17 WQAYRGAP 24


>sp|PSA2_HALVD|PROTEASOME subunit alpha 2|Haloferax volcanii (strain ATCC 29605

Query: 5 RGAPVL 10
RGAPVL
Sbjct: 34 RGAPVL 39


>sp|PDXT_METAC|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosarcina acetivorans

Query: 4 ARGAPVL 10
ARG PVL
Sbjct: 75 ARGVPVL 81


>sp|PYRC_METST|DIHYDROOROTASE stadtmanae (strain ATCC 43021

Query: 1 WKKARGAPVL 10
WK A G P L
Sbjct: 312 WKSAAGIPGL 321


>sp|GLPK_HALWD|GLYCEROL kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 WKKARGAPV 9
W +A G PV
Sbjct: 89 WDEASGKPV 97


>sp|HUTI_THEAC|IMIDAZOLONEPROPIONASE acidophilum (strain ATCC 25905

Query: 2 KKARGAPVL 10
KK RG P++
Sbjct: 246 KKTRGLPIV 254


>sp|Y4342_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 3 KARGAPV 9
KARG PV
Sbjct: 244 KARGLPV 250


>sp|CSD_HALSA|PROBABLE cysteine desulfurase|Halobacterium salinarum (strain ATCC 700922

Query: 1 WKKARGAPVL 10
WK G PV+
Sbjct: 278 WKFEAGTPVI 287


>sp|SOR_ARCFU|PUTATIVE superoxide reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WKKARGAPVL 10
WKK + PV+
Sbjct: 9 WKKEKHVPVI 18


>sp|IF2P_THEON|PROBABLE translation initiation factor IF-2|Thermococcus onnurineus (strain

Query: 3 KARGAPVL 10
KARG P+
Sbjct: 426 KARGVPIF 433


>sp|RL18_HALMA|LARGE ribosomal subunit protein uL18|Haloarcula marismortui (strain ATCC

Query: 1 WKKARGAPV 9
W++ RGA +
Sbjct: 140 WQRTRGAHI 148


>sp|RL18_NATPD|LARGE ribosomal subunit protein uL18|Natronomonas pharaonis (strain ATCC

Query: 1 WKKARGAPV 9
W++ RGA +
Sbjct: 140 WQRTRGAHI 148




52|Sequence|256|265|GAPVLEKTLG

>sp|RPO6_METLZ|DNA-DIRECTED RNA polymerase subunit Rpo6|Methanocorpusculum labreanum (strain

Query: 1 GAPVLEKTL 9
GAPVL KT+
Sbjct: 22 GAPVLVKTV 30


>sp|GLMU_META3|BIFUNCTIONAL protein GlmU|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GAPVLEKTL 9
GAP+LE+ +
Sbjct: 30 GAPILERII 38


>sp|TRM1_PYRIL|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum islandicum

Query: 2 APVLEKTL 9
+P LEKTL
Sbjct: 310 SPTLEKTL 317


>sp|RL18A_METM6|LARGE ribosomal subunit protein eL20|Methanococcus maripaludis (strain

Query: 2 APVLEKTL 9
+P+L+KTL
Sbjct: 66 SPILKKTL 73


>sp|CSG_METAC|MAJOR S-layer protein|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PVLEKTLG 10
P +EKT+G
Sbjct: 587 PYVEKTIG 594


>sp|Y476_PYRFU|PROTEIN PF0476|Pyrococcus furiosus (strain ATCC 43587

Query: 2 APVLEKTL 9
AP+LE+T+
Sbjct: 197 APILEETI 204


>sp|AATA_SACI7|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GAPVLEKTL 9
G P+LE+T+
Sbjct: 283 GRPLLERTI 291


>sp|AATA_SACS2|A-TYPE ATP synthase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 1 GAPVLEKTL 9
G P+LE+T+
Sbjct: 283 GRPLLERTI 291


>sp|AATA_SACI1|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GAPVLEKTL 9
G P+LE+T+
Sbjct: 283 GRPLLERTI 291


>sp|AATA_SACI6|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GAPVLEKTL 9
G P+LE+T+
Sbjct: 283 GRPLLERTI 291


>sp|AATA_SACI4|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GAPVLEKTL 9
G P+LE+T+
Sbjct: 283 GRPLLERTI 291


>sp|AATA_SACI3|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.27)

Query: 1 GAPVLEKTL 9
G P+LE+T+
Sbjct: 283 GRPLLERTI 291


>sp|AATA_SACI2|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GAPVLEKTL 9
G P+LE+T+
Sbjct: 283 GRPLLERTI 291


>sp|RL18A_METMP|LARGE ribosomal subunit protein eL20|Methanococcus maripaludis (strain

Query: 2 APVLEKTL 9
+P+L+KTL
Sbjct: 66 SPILKKTL 73


>sp|PDXT_HYPBU|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Hyperthermus butylicus (strain

Query: 2 APVLEKTLG 10
AP++E+T G
Sbjct: 141 APIIEETWG 149


>sp|MTTB_METBU|TRIMETHYLAMINE methyltransferase MttB|Methanococcoides burtonii (strain DSM 6242

Query: 1 GAPVLEKTLG 10
G PV ++TLG
Sbjct: 397 GIPVNDETLG 406


>sp|RUVB_METB6|HOLLIDAY junction branch migration complex|Methanoregula boonei (strain

Query: 3 PVLEKT 8
PVLEKT
Sbjct: 86 PVLEKT 91


>sp|DTDA_METLZ|D-AMINOACYL-TRNA deacylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 PVLEKTLG 10
PVL +TLG
Sbjct: 390 PVLARTLG 397




53|Sequence|261|270|EKTLGYNIWY

>sp|GLYA_HYPBU|SERINE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 EKTLGYNIW 9
EKT+ +N+W
Sbjct: 21 EKTITHNLW 29


>sp|EF1A_METKA|ELONGATION factor 1-alpha|Methanopyrus kandleri (strain AV19 /

Query: 2 KTLGYNI 8
KT+GYN+
Sbjct: 160 KTIGYNV 166


>sp|Y1534_PYRCJ|UPF0284 protein Pcal_1534|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 LGYNIW 9
LGYN W
Sbjct: 155 LGYNAW 160


>sp|Y388_METJA|UNCHARACTERIZED protein MJ0388|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KTLGYNIWY 10
KTLGY + Y
Sbjct: 97 KTLGYKVIY 105


>sp|Y188_METJA|UNCHARACTERIZED protein MJ0188|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KTLGYNI 8
K+LGYN+
Sbjct: 136 KSLGYNL 142


>sp|PSTB_METHJ|PHOSPHATE import ATP-binding protein PstB|Methanospirillum hungatei JF-1

Query: 5 GYNIWY 10
G N+WY
Sbjct: 11 GLNLWY 16


>sp|SYS_KORCO|SERINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 EKTLGYNIWY 10
E+T G+N+ Y
Sbjct: 142 EQTRGFNVEY 151


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 KTLGYNIW 9
+ GYN+W
Sbjct: 79 RMTGYNVW 86


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KTLGYNIW 9
KT GY +W
Sbjct: 337 KTRGYVVW 344


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KTLGYNIW 9
KT GY +W
Sbjct: 337 KTRGYVVW 344


>sp|FPOM_METMA|F(420)H(2) dehydrogenase subunit M|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 TLGYNIW 9
T GY++W
Sbjct: 424 TAGYHLW 430


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 GYNIW 9
GYN+W
Sbjct: 77 GYNVW 81


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 GYNIW 9
GYN+W
Sbjct: 77 GYNVW 81


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 5 GYNIW 9
GYN+W
Sbjct: 77 GYNVW 81


>sp|Y817_ARCFU|UNCHARACTERIZED protein AF_0817|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KTLGYNIWY 10
KT G NI+Y
Sbjct: 112 KTDGVNIYY 120




54|Sequence|266|275|YNIWYYPESN

>sp|RPO2C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo2C|Archaeoglobus fulgidus (strain ATCC

Query: 2 NIWYYPESN 10
N+ YYP+SN
Sbjct: 40 NVVYYPDSN 48


>sp|NITR_PYRAB|NITRILASE abyssi (strain GE5 /

Query: 4 WYYPES 9
W++PES
Sbjct: 149 WFFPES 154


>sp|DNLI_THEAC|DNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 NIWYYP 7
++W+YP
Sbjct: 511 DVWFYP 516


>sp|Y510_ARCFU|UNCHARACTERIZED transporter AF_0510|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YNIWYYPESN 10
Y +WYY +N
Sbjct: 227 YVVWYYALTN 236


>sp|CBSA_SACS2|CYTOCHROME b558/566 subunit A|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NIWYYPE 8
N WYYP+
Sbjct: 220 NTWYYPD 226


>sp|PT1_HALVD|PHOSPHOENOLPYRUVATE-PROTEIN phosphotransferase|Haloferax volcanii (strain ATCC 29605

Query: 3 IWYYPESN 10
+WY P+++
Sbjct: 21 VWYRPDAD 28


>sp|THI4_METTP|THIAMINE thiazole synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 YNIWY 5
Y+IWY
Sbjct: 87 YDIWY 91


>sp|RL10E_NATPD|LARGE ribosomal subunit protein uL16|Natronomonas pharaonis (strain ATCC

Query: 1 YNIWYYPE 8
+ IW +PE
Sbjct: 137 FTIWCHPE 144


>sp|GGR1_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanococcoides burtonii (strain DSM 6242

Query: 3 IWYYPESN 10
+W +P+ N
Sbjct: 209 VWVFPKGN 216


>sp|DYR1_HALMA|DIHYDROFOLATE reductase 1|Haloarcula marismortui (strain ATCC 43049

Query: 4 WYYPE 8
W+YPE
Sbjct: 29 WHYPE 33


>sp|MPNS_NITMS|METHYLPHOSPHONATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 WYYPES 9
W YPES
Sbjct: 322 WKYPES 327


>sp|GCSH3_SULTO|PROBABLE glycine cleavage system H|Sulfurisphaera tokodaii (strain DSM

Query: 3 IWYYPESN 10
++YYPE +
Sbjct: 12 LYYYPEEH 19




55|Sequence|271|280|YPESNTNLTE

>sp|DCUP_PICTO|UROPORPHYRINOGEN decarboxylase|Picrophilus torridus (strain ATCC 700027

Query: 2 PESNTNLTE 10
P+SN NLT+
Sbjct: 151 PDSNLNLTK 159


>sp|RL10_AERPE|LARGE ribosomal subunit protein uL10|Aeropyrum pernix (strain ATCC 700893

Query: 2 PESNTNLT 9
PE TNLT
Sbjct: 131 PEGMTNLT 138


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 SNTNLTE 10
SNTNL+E
Sbjct: 552 SNTNLSE 558




56|Sequence|276|285|TNLTETMNTT

>sp|NIFD_METTH|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 1 TNLTET 6
TNLTET
Sbjct: 109 TNLTET 114


>sp|Y963_METJA|UNCHARACTERIZED protein MJ0963|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NLTETMNT 9
N+T T+NT
Sbjct: 397 NMTNTLNT 404




57|Sequence|281|290|TMNTTNQQLE

***** No hits found ******


58|Sequence|286|295|NQQLELHLGG

>sp|SYC_METBF|CYSTEINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 LELHLGG 10
L++HLGG
Sbjct: 225 LDMHLGG 231


>sp|SYC_NANEQ|CYSTEINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 QQLELHLGG 10
++ ++HLGG
Sbjct: 217 ERFDIHLGG 225


>sp|KCY_IGNH4|CYTIDYLATE kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 NQQLELHLGG 10
N +E HLGG
Sbjct: 76 NVVIEAHLGG 85


>sp|PUS10_ACIS3|TRNA pseudouridine synthase Pus10|Acidilobus saccharovorans (strain DSM

Query: 4 LELHLGG 10
+E HLGG
Sbjct: 254 VEFHLGG 260




59|Sequence|291|300|LHLGGESFWV

>sp|HIS7_PYRAE|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 LGGESFWV 10
LGG ++WV
Sbjct: 105 LGGRAYWV 112


>sp|AGLC_METVO|DOLICHYL N-acetyl-alpha-D-glucosaminyl phosphate

Query: 4 GGESFW 9
GG SFW
Sbjct: 149 GGSSFW 154


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 GGESFWV 10
G E FWV
Sbjct: 250 GNEEFWV 256


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 GGESFWV 10
G E FWV
Sbjct: 250 GNEEFWV 256


>sp|HIS7_PYRCJ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 LGGESFWV 10
LGG +WV
Sbjct: 105 LGGRPYWV 112


>sp|P152_METTH|PROTEIN MTH_152|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LHLGGESFWV 10
LH+GG F V
Sbjct: 169 LHVGGNKFVV 178


>sp|DNAK_METTE|CHAPERONE protein DnaK|Methanosarcina thermophila

Query: 2 HLGGESF 8
HLGG+ F
Sbjct: 199 HLGGDDF 205


>sp|DNAK_METMZ|CHAPERONE protein DnaK|Methanosarcina mazei (Methanosarcina frisia)

Query: 2 HLGGESF 8
HLGG+ F
Sbjct: 199 HLGGDDF 205


>sp|DNAK_METMA|CHAPERONE protein DnaK|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HLGGESF 8
HLGG+ F
Sbjct: 199 HLGGDDF 205


>sp|DNAK_METBU|CHAPERONE protein DnaK|Methanococcoides burtonii (strain DSM 6242

Query: 2 HLGGESF 8
HLGG+ F
Sbjct: 199 HLGGDDF 205


>sp|DNAK_METAC|CHAPERONE protein DnaK|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HLGGESF 8
HLGG+ F
Sbjct: 199 HLGGDDF 205


>sp|Y066_METJA|UNCHARACTERIZED protein MJ0066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LHLGGESFW 9
+ L GE+FW
Sbjct: 313 IRLRGENFW 321


>sp|PURO_METKA|IMP cyclohydrolase|Methanopyrus kandleri (strain AV19 /

Query: 5 GESFWV 10
GE+FW+
Sbjct: 118 GETFWL 123


>sp|EF2_SACS2|ELONGATION factor 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GGESFW 9
GG +FW
Sbjct: 691 GGRAFW 696


>sp|EF2_SACI7|ELONGATION factor 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 GGESFW 9
GG +FW
Sbjct: 691 GGRAFW 696


>sp|EF2_SACI6|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.4 /

Query: 4 GGESFW 9
GG +FW
Sbjct: 691 GGRAFW 696


>sp|EF2_SACI4|ELONGATION factor 2|Saccharolobus islandicus (strain M.14.25 /

Query: 4 GGESFW 9
GG +FW
Sbjct: 691 GGRAFW 696


>sp|EF2_SACI3|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 GGESFW 9
GG +FW
Sbjct: 691 GGRAFW 696


>sp|EF2_SACI2|ELONGATION factor 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 GGESFW 9
GG +FW
Sbjct: 691 GGRAFW 696


>sp|EF2_SACI1|ELONGATION factor 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 GGESFW 9
GG +FW
Sbjct: 691 GGRAFW 696


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 4 GGESFW 9
GG +FW
Sbjct: 691 GGRAFW 696


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 3 LGGESFW 9
L G+SFW
Sbjct: 336 LVGQSFW 342


>sp|MSRA_SULAC|PEPTIDE methionine sulfoxide reductase MsrA|Sulfolobus acidocaldarius

Query: 3 LGGESFW 9
LGG FW
Sbjct: 6 LGGGCFW 12


>sp|MSRA_SACS2|PEPTIDE methionine sulfoxide reductase MsrA|Saccharolobus solfataricus

Query: 3 LGGESFW 9
LGG FW
Sbjct: 6 LGGGCFW 12


>sp|MSRA_NATPD|PEPTIDE methionine sulfoxide reductase MsrA|Natronomonas pharaonis

Query: 3 LGGESFW 9
LGG FW
Sbjct: 7 LGGGCFW 13


>sp|MSRA_HALSA|PEPTIDE methionine sulfoxide reductase MsrA|Halobacterium salinarum

Query: 3 LGGESFW 9
LGG FW
Sbjct: 8 LGGGCFW 14


>sp|MSRA_HALS3|PEPTIDE methionine sulfoxide reductase MsrA|Halobacterium salinarum

Query: 3 LGGESFW 9
LGG FW
Sbjct: 8 LGGGCFW 14


>sp|NADB_SACS2|L-ASPARTATE oxidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GGESFW 9
GG S+W
Sbjct: 34 GGSSYW 39


>sp|RL15_THEVO|LARGE ribosomal subunit protein uL15|Thermoplasma volcanium (strain

Query: 1 LHLGGESF 8
LH GG+ F
Sbjct: 49 LHFGGKGF 56


>sp|RL15_THEAC|LARGE ribosomal subunit protein uL15|Thermoplasma acidophilum (strain

Query: 1 LHLGGESF 8
LH GG+ F
Sbjct: 49 LHFGGKGF 56




60|Sequence|296|305|ESFWVSMISY

>sp|Y1266_METJA|UNCHARACTERIZED protein MJ1266|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ESFWVSMISY 10
++FWV ISY
Sbjct: 328 DAFWVGAISY 337


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 ESFWVS 6
ESFW+S
Sbjct: 117 ESFWIS 122


>sp|SYP_SULTO|PROLINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ESFWV 5
ESFWV
Sbjct: 120 ESFWV 124




61|Sequence|301|310|SMISYNSLGK

>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 3 ISYNSLGK 10
ISYNS+ K
Sbjct: 279 ISYNSIAK 286




62|Sequence|306|315|NSLGKSPVAT

>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 NSLGKSPVA 9
NSLG P+A
Sbjct: 173 NSLGADPMA 181


>sp|DCDB_HALSA|DCTP deaminase, dUMP-forming|Halobacterium salinarum (strain ATCC 700922

Query: 1 NSLGKSPVA 9
++LGK PVA
Sbjct: 135 SNLGKVPVA 143


>sp|DCDB_HALS3|DCTP deaminase, dUMP-forming|Halobacterium salinarum (strain ATCC 29341

Query: 1 NSLGKSPVA 9
++LGK PVA
Sbjct: 135 SNLGKVPVA 143




63|Sequence|311|320|SPVATLRIPA

***** No hits found ******


64|Sequence|316|325|LRIPAIQEKS

>sp|DNAK_METTP|CHAPERONE protein DnaK|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 RIPAIQE 8
R+PA+QE
Sbjct: 320 RMPAVQE 326


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 1 LRIPAIQEK 9
LRIP+I +K
Sbjct: 869 LRIPSIGDK 877


>sp|DNAK_NATPD|CHAPERONE protein DnaK|Natronomonas pharaonis (strain ATCC 35678

Query: 2 RIPAIQEK 9
R+P +QEK
Sbjct: 319 RMPMVQEK 326


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 PAIQEK 9
PAIQEK
Sbjct: 7 PAIQEK 12




65|Sequence|321|330|IQEKSFQCIE

>sp|LEU1_ARCFU|PROBABLE 2-isopropylmalate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 1 IQEKSFQCIE 10
I EKS +C+E
Sbjct: 117 IIEKSVECVE 126


>sp|Y2120_ARCFU|UNCHARACTERIZED protein AF_2120|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IQEKSFQCIE 10
I KS++CI+
Sbjct: 102 IWRKSYECIQ 111


>sp|DPHB_METTP|DIPHTHINE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 IQEKSFQCI 9
IQ++ F CI
Sbjct: 170 IQDERFMCI 178


>sp|GCH3_METVS|GTP cyclohydrolase III|Methanococcus vannielii (strain ATCC 35089

Query: 1 IQEKSFQCI 9
+ EK FQC+
Sbjct: 192 MNEKDFQCM 200




66|Sequence|326|335|FQCIEVMQAC

>sp|MFNB_METKA|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 QCIEVMQAC 10
+ +EVM+AC
Sbjct: 98 EALEVMRAC 106


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 1 FQCIEVM 7
F C+E+M
Sbjct: 269 FNCVEIM 275


>sp|QUEC_AERPE|7-CYANO-7-DEAZAGUANINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 QCIEVMQA 9
+CIE +QA
Sbjct: 159 ECIEALQA 166


>sp|DAPB_METMJ|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FQCIEV 6
F+CIEV
Sbjct: 210 FECIEV 215


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 CIEVMQAC 10
C+++++AC
Sbjct: 471 CLQIVKAC 478




67|Sequence|331|340|VMQACVAEDQ

***** No hits found ******


68|Sequence|336|345|VAEDQLVVKW

>sp|RFRNP_HALMA|RNA-FREE ribonuclease P|Haloarcula marismortui (strain ATCC 43049

Query: 1 VAEDQLVVKW 10
V EDQ ++ W
Sbjct: 181 VTEDQGIINW 190


>sp|SECY_PYRHO|PROTEIN translocase subunit SecY|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 DQLVVKW 10
D+LV KW
Sbjct: 165 DELVSKW 171


>sp|SECY_PYRAB|PROTEIN translocase subunit SecY|Pyrococcus abyssi (strain GE5 /

Query: 4 DQLVVKW 10
D+LV KW
Sbjct: 165 DELVSKW 171


>sp|SECY_PYRFU|PROTEIN translocase subunit SecY|Pyrococcus furiosus (strain ATCC 43587

Query: 4 DQLVVKW 10
D+LV KW
Sbjct: 165 DELVSKW 171




69|Sequence|341|350|LVVKWQSSAL

>sp|RL2_NANEQ|LARGE ribosomal subunit protein uL2|Nanoarchaeum equitans (strain

Query: 1 LVVKWQSSA 9
+VVKW++ A
Sbjct: 57 MVVKWENGA 65


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 KWQSSAL 10
KW++SAL
Sbjct: 455 KWKASAL 461


>sp|FAU1_CALMQ|PROBABLE ribonuclease FAU-1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LVVKWQSSA 9
L ++W+SSA
Sbjct: 188 LGIRWRSSA 196




70|Sequence|346|355|QSSALDVNTW

>sp|WECC_META3|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 SSALDVNTW 10
S+ LD+N W
Sbjct: 233 STELDINVW 241


>sp|NFI_NANEQ|BIFUNCTIONAL methyltransferase-like/endonuclease|Nanoarchaeum equitans (strain

Query: 2 SSALDVNTW 10
S LD+N W
Sbjct: 4 SKLLDINYW 12




71|Sequence|351|360|DVNTWMIEWF

>sp|ENDA_AERPE|TRNA-SPLICING endonuclease|Aeropyrum pernix (strain ATCC 700893

Query: 1 DVNTWMIEWF 10
DV+ MI+WF
Sbjct: 175 DVSYLMIDWF 184


>sp|CPGS_PYRFU|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus furiosus (strain

Query: 1 DVNTWMIE 8
DVN W IE
Sbjct: 13 DVNRWAIE 20


>sp|AOX1_AERPE|HEME-COPPER oxidase subunit I+III|Aeropyrum pernix (strain ATCC 700893

Query: 3 NTWMIEWF 10
N+W +EWF
Sbjct: 494 NSWTLEWF 501


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 DVNTWMIEWF 10
DV+ W EW+
Sbjct: 424 DVSAWCEEWW 433


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 3 NTWMIEWF 10
++W +EW+
Sbjct: 445 SSWCVEWY 452


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 3 NTWMIEWF 10
++W +EW+
Sbjct: 445 SSWCVEWY 452


>sp|PORA_METJA|PYRUVATE synthase subunit PorA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DVNTWMIEWF 10
DVN EWF
Sbjct: 241 DVNEEFAEWF 250


>sp|RNZ_PYRAR|RIBONUCLEASE Z|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DVNTWMIEW 9
D W++EW
Sbjct: 127 DACGWLLEW 135


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 2 VNTWMIEWF 10
++ W+ EWF
Sbjct: 18 LHPWVSEWF 26


>sp|RNZ_PYRAE|RIBONUCLEASE Z|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DVNTWMIEW 9
D W+I+W
Sbjct: 127 DACGWLIQW 135


>sp|SYK_METTH|LYSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 TWMIEW 9
TW +EW
Sbjct: 232 TWRVEW 237


>sp|CPGS_PYRHO|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus horikoshii (strain

Query: 1 DVNTWMIE 8
DVN W +E
Sbjct: 17 DVNRWALE 24


>sp|CPGS_PYRAB|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 DVNTWMIE 8
DVN W +E
Sbjct: 13 DVNRWALE 20


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DVNTWM 6
DVN WM
Sbjct: 496 DVNPWM 501


>sp|TRM5B_PYRAB|TRNA (guanine(37)-N(1))-methyltransferase Trm5b|Pyrococcus abyssi

Query: 1 DVNTWMIEWF 10
D+N W I++
Sbjct: 211 DINPWAIKYL 220


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 TWMIEW 9
TW +EW
Sbjct: 214 TWRVEW 219


>sp|RNZ_PYRCJ|RIBONUCLEASE Z|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 DVNTWMIEW 9
D W+ EW
Sbjct: 127 DACGWLFEW 135


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 3 NTWMIEWF 10
++W EW+
Sbjct: 445 SSWCTEWY 452


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 3 NTWMIEWF 10
++W EW+
Sbjct: 445 SSWCTEWY 452


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 3 NTWMIEWF 10
++W EW+
Sbjct: 445 SSWCTEWY 452


>sp|SYK_THEVO|LYSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 WMIEW 9
W IEW
Sbjct: 207 WRIEW 211


>sp|PURP_NITMS|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 NTWMIEW 9
N W++ W
Sbjct: 97 NKWILRW 103


>sp|PURP_CENSY|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Cenarchaeum symbiosum (strain A)

Query: 3 NTWMIEW 9
N W++ W
Sbjct: 97 NKWILRW 103


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 TWMIEW 9
TW ++W
Sbjct: 215 TWRVDW 220


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 4 TWMIEW 9
TW ++W
Sbjct: 215 TWRVDW 220


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 TWMIEW 9
TW ++W
Sbjct: 211 TWRVDW 216


>sp|RFRNP_METM5|RNA-FREE ribonuclease P|Methanococcus maripaludis (strain C5 /

Query: 2 VNTWMIE 8
VNTW+++
Sbjct: 77 VNTWLVK 83


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 TWMIEW 9
TW ++W
Sbjct: 215 TWRVDW 220


>sp|SPEE_SULAC|POLYAMINE aminopropyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 4 TWMIEW 9
TW +EW
Sbjct: 5 TWHLEW 10


>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 DVNTWMIEW 9
DV+ W IE+
Sbjct: 192 DVDGWRIEY 200


Query: 5 WMIEW 9
W IEW
Sbjct: 242 WKIEW 246


>sp|SPEE_AERPE|POLYAMINE aminopropyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 4 TWMIEWF 10
+W +EW
Sbjct: 14 SWFLEWL 20


>sp|HTPX1_SULAC|PROTEASE HtpX homolog 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 WMIEWF 10
W+I+W
Sbjct: 48 WLIQWL 53


>sp|SPEE_SACS2|POLYAMINE aminopropyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 5 WMIEW 9
W++EW
Sbjct: 6 WLLEW 10


>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 TWMIEW 9
TW ++W
Sbjct: 209 TWRVDW 214




72|Sequence|356|365|MIEWFPDVDS

>sp|ASPD_METKA|L-ASPARTATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 4 WFPDVDS 10
WFPD D+
Sbjct: 50 WFPDCDT 56


>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 MIEWFPDVD 9
M +WFP V+
Sbjct: 351 MFQWFPGVE 359


>sp|BRIX_METMA|PROBABLE Brix domain-containing ribosomal biogenesis|Methanosarcina mazei

Query: 4 WFPDV 8
WFPDV
Sbjct: 88 WFPDV 92


>sp|Y1479_METJA|UNCHARACTERIZED aminotransferase MJ1479|Methanocaldococcus jannaschii (strain ATCC

Query: 4 WFPDVD 9
W+PD+D
Sbjct: 155 WYPDID 160


>sp|SECY_PYRHO|PROTEIN translocase subunit SecY|Pyrococcus horikoshii (strain ATCC

Query: 1 MIEWFPDVD 9
M +WFP+V+
Sbjct: 10 MEKWFPEVE 18


>sp|IF2A_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 3 EWFPDVD 9
EW PD++
Sbjct: 147 EWLPDIN 153


>sp|RL6_HALSA|LARGE ribosomal subunit protein uL6|Halobacterium salinarum (strain

Query: 4 WFPDVD 9
W+PDVD
Sbjct: 35 WYPDVD 40


>sp|FAEHP_METMA|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IEWFPDVDS 10
+E FPD+D+
Sbjct: 141 LEGFPDIDT 149


>sp|FAEHP_METTP|BIFUNCTIONAL enzyme Fae/Hps|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 IEWFPDVD 9
+E FPDVD
Sbjct: 141 MEGFPDVD 148


>sp|AROC_METKA|CHORISMATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 MIEWFPDVDS 10
MI W DVDS
Sbjct: 81 MIVWNEDVDS 90


>sp|BRIX_METAC|PROBABLE Brix domain-containing ribosomal biogenesis|Methanosarcina

Query: 4 WFPDVD 9
WFPD++
Sbjct: 88 WFPDLE 93


>sp|RL6_METTP|LARGE ribosomal subunit protein uL6|Methanothrix thermoacetophila

Query: 4 WFPDVD 9
W+PD++
Sbjct: 38 WYPDIE 43


>sp|SECY_PYRAB|PROTEIN translocase subunit SecY|Pyrococcus abyssi (strain GE5 /

Query: 3 EWFPDVD 9
+WFP+V+
Sbjct: 12 KWFPEVE 18


>sp|KHSE_PYRFU|HOMOSERINE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MIEWFPDV 8
++ WFP V
Sbjct: 225 LVPWFPKV 232


>sp|GLPK_HALMA|GLYCEROL kinase|Haloarcula marismortui (strain ATCC 43049

Query: 2 IEWFPDVD 9
IEW DVD
Sbjct: 324 IEWLEDVD 331


>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 MIEWFPDVD 9
MIE F DVD
Sbjct: 134 MIELFYDVD 142


>sp|GLPK_HALSA|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 IEWFPDVD 9
IEW DVD
Sbjct: 324 IEWLEDVD 331


>sp|GLPK_HALS3|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 29341

Query: 2 IEWFPDVD 9
IEW DVD
Sbjct: 324 IEWLEDVD 331


>sp|RL6_HALMA|LARGE ribosomal subunit protein uL6|Haloarcula marismortui (strain ATCC

Query: 4 WFPDVD 9
W+PD+D
Sbjct: 35 WYPDID 40


>sp|RNP3_PYRFU|RIBONUCLEASE P protein component 3|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EWFPDV 8
EWF DV
Sbjct: 26 EWFDDV 31


>sp|SECY_PYRFU|PROTEIN translocase subunit SecY|Pyrococcus furiosus (strain ATCC 43587

Query: 4 WFPDVD 9
WFP+V+
Sbjct: 13 WFPEVE 18


>sp|FAEHP_ARCFU|BIFUNCTIONAL enzyme Fae/Hps|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 FPDVDS 10
FPDVD+
Sbjct: 145 FPDVDT 150


>sp|FAEHP_METBU|BIFUNCTIONAL enzyme Fae/Hps|Methanococcoides burtonii (strain DSM 6242

Query: 2 IEWFPDVDS 10
++ FPD+D+
Sbjct: 141 LDGFPDIDT 149


>sp|Y2165_ARCFU|UNCHARACTERIZED protein AF_2165|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 WFPDVD 9
W PDVD
Sbjct: 79 WDPDVD 84


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 IEWFPD 7
IEW PD
Sbjct: 359 IEWIPD 364


>sp|MTRH_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina acetivorans (strain

Query: 2 IEWFPDVD 9
I+WF ++D
Sbjct: 88 IDWFIEID 95


>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 EWFPDVD 9
EW D+D
Sbjct: 137 EWLKDID 143


>sp|SYK_PICTO|LYSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 IEWFPD 7
IEW PD
Sbjct: 438 IEWSPD 443




73|Sequence|361|370|PDVDSEPTTL

>sp|HMGCS_SULAC|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PDVDSEPTTL 10
PDVD + TT+
Sbjct: 44 PDVDEDSTTM 53


>sp|DHE4_SACSH|NADP-SPECIFIC glutamate dehydrogenase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 PDVDSEPTTL 10
PD+++ P T+
Sbjct: 151 PDINTNPQTM 160


>sp|MSMJL_METJA|LARGE-CONDUCTANCE mechanosensitive channel MscMJLR|Methanocaldococcus jannaschii

Query: 1 PDVDSEPTTL 10
P+V+ EP T+
Sbjct: 288 PNVEDEPITV 297


>sp|AROE_METVS|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus vannielii (strain ATCC 35089

Query: 1 PDVDSEP 7
PDV+S+P
Sbjct: 204 PDVNSKP 210


>sp|KDPB_THEAC|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 DVDSEPTTL 10
D+DS PT L
Sbjct: 533 DLDSNPTKL 541


>sp|KDPB_THEVO|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma volcanium (strain ATCC

Query: 2 DVDSEPTTL 10
D+DS PT L
Sbjct: 536 DLDSNPTKL 544


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 1 PDVDSEPT 8
PDV EPT
Sbjct: 326 PDVTDEPT 333


>sp|BAST_HALS3|TRANSDUCER protein BasT|Halobacterium salinarum (strain ATCC 29341

Query: 2 DVDSEP 7
DVDSEP
Sbjct: 465 DVDSEP 470


>sp|TFS_METTL|TRANSCRIPTION factor S|Methanothermococcus thermolithotrophicus

Query: 2 DVDSEPTT 9
DVD+ PTT
Sbjct: 55 DVDTLPTT 62


>sp|FAE_METBF|5,6,7,8-TETRAHYDROMETHANOPTERIN hydro-lyase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PDVDSEPTTL 10
P++ +PTTL
Sbjct: 69 PNIQPKPTTL 78




74|Sequence|366|375|EPTTLSWESV

>sp|HMGCS_SULAC|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EPTTLSWES 9
+ TT++WES
Sbjct: 49 DSTTMAWES 57


>sp|HMGCS_SACS2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EPTTLSWES 9
+ TT++WES
Sbjct: 49 DSTTIAWES 57


>sp|HMGCS_SACI7|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 EPTTLSWES 9
+ TT++WES
Sbjct: 49 DSTTIAWES 57


>sp|HMGCS_SACI2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 EPTTLSWES 9
+ TT++WES
Sbjct: 49 DSTTIAWES 57


>sp|HMGCS_SACI1|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 EPTTLSWES 9
+ TT++WES
Sbjct: 49 DSTTIAWES 57


>sp|HMGCS_SACI6|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EPTTLSWES 9
+ TT++WES
Sbjct: 49 DSTTIAWES 57


>sp|HMGCS_SACI4|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 EPTTLSWES 9
+ TT++WES
Sbjct: 49 DSTTIAWES 57


>sp|HMGCS_SACI3|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 EPTTLSWES 9
+ TT++WES
Sbjct: 49 DSTTIAWES 57


>sp|Y600_METMP|PROBABLE minor pilin MMP0600|Methanococcus maripaludis (strain DSM 14266

Query: 2 PTTLSWES 9
PT +SW+S
Sbjct: 139 PTAMSWDS 146


>sp|GLYA_HALLT|SERINE hydroxymethyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 2 PTTLSWESV 10
P T+ WE +
Sbjct: 177 PRTVDWEEI 185


>sp|Y426_METJA|UNCHARACTERIZED protein MJ0426|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PTTLSW 7
PTTL+W
Sbjct: 38 PTTLNW 43


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 EPTTLSWES 9
+P+T+SW S
Sbjct: 8225 DPSTVSWPS 8233


>sp|Y900_METJA|UNCHARACTERIZED protein MJ0900|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PTTLSWE 8
PT ++WE
Sbjct: 204 PTNITWE 210


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EPTTLSWESV 10
+P T WE V
Sbjct: 488 KPITFKWEEV 497


>sp|HMGCS_SULTO|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EPTTLSWES 9
+ TT++WE+
Sbjct: 49 DSTTMAWEA 57


>sp|DPDH_PYRIL|D-PROLINE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 EPTTLSWESV 10
EPT WE++
Sbjct: 93 EPTQDMWEAI 102




75|Sequence|371|380|SWESVSQATN

>sp|Y79B_METJA|UNCHARACTERIZED protein MJ0795.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SWESVSQATN 10
SWE + + TN
Sbjct: 138 SWEEIEKTTN 147


>sp|SAHH_PYRHO|ADENOSYLHOMOCYSTEINASE horikoshii (strain ATCC 700860

Query: 1 SWESVSQATN 10
+W+ V +ATN
Sbjct: 196 TWDGVMRATN 205


>sp|SAHH_PYRAE|ADENOSYLHOMOCYSTEINASE aerophilum (strain ATCC 51768

Query: 1 SWESVSQATN 10
+W+ V +ATN
Sbjct: 213 TWDGVMRATN 222


>sp|SAHH_PYRFU|ADENOSYLHOMOCYSTEINASE furiosus (strain ATCC 43587

Query: 1 SWESVSQATN 10
+W+ + +ATN
Sbjct: 196 TWDGIMRATN 205


>sp|SAHH_PYRAB|ADENOSYLHOMOCYSTEINASE abyssi (strain GE5 /

Query: 1 SWESVSQATN 10
+W+ + +ATN
Sbjct: 197 TWDGIMRATN 206


>sp|SIHH_METAC|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SWESVSQATN 10
+W+ +++ TN
Sbjct: 189 AWDGINRTTN 198




76|Sequence|376|385|SQATNWTIQQ

>sp|RS3_CENSY|SMALL ribosomal subunit protein uS3|Cenarchaeum symbiosum (strain A)

Query: 2 QATNWTIQQ 10
+AT WTIQQ
Sbjct: 111 RATMWTIQQ 119


>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 NWTIQQ 10
NW IQQ
Sbjct: 802 NWKIQQ 807




77|Sequence|381|390|WTIQQDKLKP

>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 IQQDKLKP 10
I++DKLKP
Sbjct: 92 IERDKLKP 99


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 IQQDKLKP 10
I++DKLKP
Sbjct: 92 IERDKLKP 99


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WTIQQDKLKP 10
W IQ+++ KP
Sbjct: 454 WNIQREETKP 463


>sp|LEUC_METS5|3-ISOPROPYLMALATE dehydratase large subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 TIQQDKLKP 10
TI+ DKL+P
Sbjct: 259 TIELDKLEP 267


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 3 IQQDKLKP 10
I++DKL+P
Sbjct: 91 IERDKLRP 98


>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 IQQDKLKP 10
+++DK+KP
Sbjct: 178 VRKDKIKP 185


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 IQQDKLKP 10
+++DK+KP
Sbjct: 178 VRKDKIKP 185


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 3 IQQDKLKP 10
+++DK+KP
Sbjct: 178 VRKDKIKP 185


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 IQQDKLKP 10
+++DK+KP
Sbjct: 178 VRKDKIKP 185


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 IQQDKLKP 10
+++DK+KP
Sbjct: 178 VRKDKIKP 185


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 3 IQQDKLKP 10
+++DK+KP
Sbjct: 178 VRKDKIKP 185


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 3 IQQDKLKP 10
+++DK+KP
Sbjct: 178 VRKDKIKP 185


>sp|RS19_METHJ|SMALL ribosomal subunit protein uS19|Methanospirillum hungatei JF-1

Query: 1 WTIQQDKL 8
WTI ++KL
Sbjct: 50 WTIGEEKL 57


>sp|SYE_NITMS|GLUTAMATE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 WTIQQDKLKP 10
W Q+K KP
Sbjct: 226 WEKMQNKFKP 235




78|Sequence|386|395|DKLKPFWCYN

>sp|NIFE_METTH|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 1 DKLKPFWCY 9
D++KPF C+
Sbjct: 433 DRIKPFSCF 441


>sp|LEUC_HALVD|3-ISOPROPYLMALATE dehydratase large subunit|Haloferax volcanii (strain ATCC 29605

Query: 1 DKLKPFW 7
D+LKP+W
Sbjct: 258 DELKPYW 264


>sp|LEUC_HALLT|3-ISOPROPYLMALATE dehydratase large subunit|Halorubrum lacusprofundi (strain ATCC

Query: 1 DKLKPFW 7
++LKP+W
Sbjct: 258 ERLKPYW 264


>sp|HELS_CALMQ|ATP-DEPENDENT DNA helicase Hel308|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 KLKPFWCYN 10
+LKP W +N
Sbjct: 131 RLKPSWIWN 139


>sp|RS13_PICTO|SMALL ribosomal subunit protein uS13|Picrophilus torridus (strain ATCC

Query: 5 PFWCYN 10
P+W YN
Sbjct: 82 PYWMYN 87


>sp|RL22_SACS2|LARGE ribosomal subunit protein uL22|Saccharolobus solfataricus (strain

Query: 5 PFWCYN 10
PFW YN
Sbjct: 61 PFWRYN 66


>sp|SYC_METBF|CYSTEINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 KPFWCY 9
KPF CY
Sbjct: 252 KPFACY 257


>sp|SYH_NATPD|HISTIDINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 KPFWCY 9
+PFW Y
Sbjct: 103 RPFWRY 108


>sp|SYH_HALWD|HISTIDINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 KPFWCY 9
+PFW Y
Sbjct: 103 RPFWRY 108


>sp|SYH_HALSA|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 KPFWCY 9
+PFW Y
Sbjct: 103 RPFWRY 108


>sp|SYH_HALS3|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 4 KPFWCY 9
+PFW Y
Sbjct: 103 RPFWRY 108


>sp|SYH_HALMA|HISTIDINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 KPFWCY 9
+PFW Y
Sbjct: 103 RPFWRY 108


>sp|SYH_HALLT|HISTIDINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 KPFWCY 9
+PFW Y
Sbjct: 103 RPFWRY 108


>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DKLKPFWCYN 10
D++ PF YN
Sbjct: 464 DRIIPFCTYN 473


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 3 LKPFWCYN 10
+ PFW Y+
Sbjct: 663 MPPFWNYS 670


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 DKLKPFW 7
DK+K +W
Sbjct: 58 DKIKNYW 64


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DKLKPFW 7
DK+K +W
Sbjct: 58 DKIKNYW 64


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 KPFWCYN 10
K FW YN
Sbjct: 278 KEFWLYN 284


>sp|Y1674_SULAC|UNCHARACTERIZED protein Saci_1674|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 PFWCYN 10
P W YN
Sbjct: 15 PIWAYN 20


>sp|SYS2_METBU|TYPE-2 serine--tRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 5 PFWCY 9
PFW Y
Sbjct: 308 PFWMY 312


>sp|SYS2_METBF|TYPE-2 serine--tRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 PFWCY 9
PFW Y
Sbjct: 308 PFWMY 312




79|Sequence|391|400|FWCYNISVYP

>sp|UPPS_METMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanosarcina

Query: 2 WCYNISV 8
WCY I V
Sbjct: 65 WCYEIGV 71


>sp|UPPS_METAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanosarcina

Query: 2 WCYNISV 8
WCY I V
Sbjct: 65 WCYEIGV 71


>sp|SYFA_METM5|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C5 /

Query: 2 WCYN 5
WCYN
Sbjct: 321 WCYN 324


>sp|RL10E_METMP|LARGE ribosomal subunit protein uL16|Methanococcus maripaludis (strain

Query: 2 WCYNISVYP 10
+ +NI VYP
Sbjct: 82 YLFNIRVYP 90


>sp|RL10E_METM7|LARGE ribosomal subunit protein uL16|Methanococcus maripaludis (strain

Query: 2 WCYNISVYP 10
+ +NI VYP
Sbjct: 82 YLFNIRVYP 90


>sp|RL10E_METM6|LARGE ribosomal subunit protein uL16|Methanococcus maripaludis (strain

Query: 2 WCYNISVYP 10
+ +NI VYP
Sbjct: 82 YLFNIRVYP 90


>sp|RL10E_METM5|LARGE ribosomal subunit protein uL16|Methanococcus maripaludis (strain

Query: 2 WCYNISVYP 10
+ +NI VYP
Sbjct: 82 YLFNIRVYP 90


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 2 WCYNISVYP 10
W Y + VYP
Sbjct: 801 WHYAVRVYP 809


>sp|PYLC_METMA|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FWCYNISVYP 10
F C+NI+ P
Sbjct: 53 FQCFNITEEP 62


>sp|SYFA_SULTO|PHENYLALANINE--TRNA ligase alpha subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 YNISVYP 10
YN+ YP
Sbjct: 199 YNVEAYP 205




80|Sequence|396|405|ISVYPMLHDK

>sp|TRPB_METLZ|TRYPTOPHAN synthase beta chain|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 YPMLHD 9
YPML+D
Sbjct: 241 YPMLND 246


>sp|Y2548_METHJ|PUTATIVE HTH-type transcriptional regulatory protein|Methanospirillum

Query: 4 YPMLHD 9
YP LHD
Sbjct: 101 YPTLHD 106


>sp|ARGC_METM7|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C7 /

Query: 1 ISVYPMLHDK 10
+++ P+LH+K
Sbjct: 83 MAIVPILHEK 92


>sp|ARGC_METM6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C6 /

Query: 1 ISVYPMLHDK 10
+++ P+LH+K
Sbjct: 83 MAIVPILHEK 92




81|Sequence|401|410|MLHDKVGEPY

>sp|AATA_HALWD|A-TYPE ATP synthase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 MLHDKVGEPY 10
+L DK+G PY
Sbjct: 100 ILEDKMGSPY 109


>sp|AMPPA_THESM|AMP phosphorylase|Thermococcus sibiricus (strain DSM 12597

Query: 1 MLHDKVGE 8
MLH KVGE
Sbjct: 451 MLHVKVGE 458


>sp|MOAA_THEKO|PROBABLE GTP 3',8-cyclase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 MLHDKVGEP 9
ML+D+ G P
Sbjct: 1 MLYDRFGRP 9


>sp|DPHB_THEVO|DIPHTHINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 MLHDKVGEP 9
+LH KVG P
Sbjct: 122 LLHYKVGPP 130


>sp|LEUC2_METKA|3-ISOPROPYLMALATE dehydratase large subunit 2|Methanopyrus kandleri (strain AV19 /

Query: 1 MLHDKVGEP 9
+L +KVGEP
Sbjct: 8 ILSEKVGEP 16


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 1 MLHDKVGEP 9
+LH K GEP
Sbjct: 451 LLHRKQGEP 459


>sp|PSB_FERPA|PROTEASOME subunit beta|Ferroglobus placidus (strain DSM 10642

Query: 1 MLHDKV 6
M+HDKV
Sbjct: 1 MIHDKV 6


>sp|PURA_THEON|ADENYLOSUCCINATE synthetase|Thermococcus onnurineus (strain NA1)

Query: 2 LHDKVG 7
LHDK+G
Sbjct: 120 LHDKIG 125


>sp|PURA_THEGJ|ADENYLOSUCCINATE synthetase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 LHDKVG 7
LHDK+G
Sbjct: 120 LHDKIG 125


>sp|HDRA_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanococcus

Query: 4 DKVGEPY 10
+KVG PY
Sbjct: 392 EKVGNPY 398


>sp|AGL6_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl6|Haloferax volcanii

Query: 2 LHDKVGEP 9
LH+ VG P
Sbjct: 170 LHEHVGNP 177


>sp|GLYA_CALMQ|SERINE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 3 HDKVGEP 9
HD+VG P
Sbjct: 127 HDEVGAP 133


>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 MLHDKVGEPY 10
M+ K GEP+
Sbjct: 452 MIDSKTGEPH 461


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LHDKVGE 8
LH K+GE
Sbjct: 801 LHKKIGE 807


>sp|Y1569_METJA|PUTATIVE metal transport protein MJ1569|Methanocaldococcus jannaschii

Query: 2 LHDKVGE 8
L DKVGE
Sbjct: 128 LRDKVGE 134


>sp|NIFB_METJA|FEMO cofactor biosynthesis protein NifB|Methanocaldococcus jannaschii

Query: 2 LHDKVG 7
+HDKVG
Sbjct: 23 IHDKVG 28




82|Sequence|406|415|VGEPYSIQAY

>sp|PUR2_METKA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 VGEPYSIQAY 10
VGE Y+IQAY
Sbjct: 197 VGEEYTIQAY 206


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GEPYSIQAY 10
GEP+S+Q Y
Sbjct: 80 GEPWSLQRY 88


>sp|CSG_METBF|MAJOR S-layer protein|Methanosarcina barkeri (strain Fusaro /

Query: 1 VGEPYSIQA 9
+GE YSIQA
Sbjct: 426 LGEGYSIQA 434


>sp|PUR2_METST|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VGEPYSIQAY 10
+GE Y+IQA+
Sbjct: 192 LGEEYTIQAF 201


>sp|PUR2_METTH|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VGEPYSIQAY 10
VGE +++QA+
Sbjct: 191 VGEEFTVQAF 200


>sp|PUR2_METBU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VGEPYSIQAY 10
VGE +++QA+
Sbjct: 189 VGEEFTVQAF 198


>sp|PUR2_METS3|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VGEPYSIQAY 10
+GE ++IQA+
Sbjct: 191 IGEEFTIQAF 200


>sp|PHR_HALSA|DEOXYRIBODIPYRIMIDINE photo-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GEPYSIQAY 10
G+PYS+ Y
Sbjct: 147 GDPYSVYTY 155


>sp|PUR2_METMJ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VGEPYSIQAY 10
VGE +++QA+
Sbjct: 188 VGEEFTLQAF 197


>sp|PUR2_METBF|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VGEPYSIQAY 10
+GE +++QA+
Sbjct: 189 IGEEFTLQAF 198


>sp|PUR2_METAC|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VGEPYSIQAY 10
+GE +++QA+
Sbjct: 191 IGEEFTLQAF 200


>sp|PUR2_METMA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VGEPYSIQAY 10
+GE +++QA+
Sbjct: 191 IGEEFTLQAF 200


>sp|CSG_METMA|MAJOR S-layer protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VGEPYSIQA 9
+GE YSI+A
Sbjct: 159 LGEGYSIEA 167


>sp|G6PI_METJA|GLUCOSE-6-PHOSPHATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGEPYSIQAY 10
+GE Y+I AY
Sbjct: 374 MGELYNINAY 383


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 GEPYSIQA 9
GEPY++ A
Sbjct: 309 GEPYAVVA 316


>sp|ARCH_PYRIL|PROTEIN archease|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GEPYSIQAY 10
GEPY I+ +
Sbjct: 107 GEPYDIEKH 115


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VGEPYSIQAY 10
VGEP + +AY
Sbjct: 399 VGEPLNPEAY 408


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 EPYSIQA 9
EPY +QA
Sbjct: 700 EPYDVQA 706


>sp|PIMT_METHJ|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VGEPYSIQAY 10
V EPY+ +AY
Sbjct: 39 VPEPYAREAY 48




83|Sequence|411|420|SIQAYAKEGV

>sp|PFDA_METLZ|PREFOLDIN subunit alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 SIQAYAKE 8
S+QAYA E
Sbjct: 16 SLQAYANE 23


>sp|SYS_METLZ|SERINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 IQAYAKEG 9
I AY KEG
Sbjct: 61 INAYKKEG 68


>sp|KAE1B_METMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 IQAYAKE 8
I+AYAKE
Sbjct: 182 IEAYAKE 188


>sp|PGK_PYRAB|PHOSPHOGLYCERATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 SIQAYAKEGV 10
SIQ Y EG+
Sbjct: 364 SIQKYGIEGI 373


>sp|KHSE_PYRAE|HOMOSERINE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 IQAYAKEGV 10
++AYA+EG+
Sbjct: 272 LRAYAEEGL 280


>sp|Y2029_AERPE|UPF0284 protein APE_2029.1|Aeropyrum pernix (strain ATCC 700893

Query: 3 QAYAKEGV 10
+ YAKEGV
Sbjct: 320 EGYAKEGV 327




84|Sequence|416|425|AKEGVPSEGP

>sp|AATC_THEKO|A-TYPE ATP synthase subunit C|Thermococcus kodakarensis (strain ATCC

Query: 3 EGVPSEGP 10
EG P EGP
Sbjct: 173 EGTPYEGP 180


>sp|DHYS_THEKO|PROBABLE deoxyhypusine synthase|Thermococcus kodakarensis (strain ATCC

Query: 3 EGVPSEGP 10
EG+P EGP
Sbjct: 16 EGIPIEGP 23


>sp|Y1141_METJA|UNCHARACTERIZED protein MJ1141|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AKEGVPSEG 9
+++G+PS+G
Sbjct: 181 SRKGIPSQG 189


>sp|PUR2_PYRAB|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 KEGVPSEGP 10
+EG+P+ GP
Sbjct: 85 REGIPTVGP 93


>sp|YPV7_METTF|UNCHARACTERIZED protein ORF7|Methanothermobacter thermautotrophicus

Query: 2 KEGVPSEG 9
KEGV S+G
Sbjct: 33 KEGVESQG 40


>sp|CAS1A_METRM|CRISPR-ASSOCIATED protein Cas1 1|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 AKEGVP 6
AKEG+P
Sbjct: 57 AKEGIP 62


>sp|RIFK_PYRIL|RIBOFLAVIN kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KEGVPSEGP 10
KEG +EGP
Sbjct: 46 KEGYVAEGP 54


>sp|DHYS_THEON|PROBABLE deoxyhypusine synthase|Thermococcus onnurineus (strain NA1)

Query: 3 EGVPSEGP 10
EG P EGP
Sbjct: 16 EGTPIEGP 23


>sp|DHYS_THEGJ|PROBABLE deoxyhypusine synthase|Thermococcus gammatolerans (strain DSM

Query: 3 EGVPSEGP 10
EG P EGP
Sbjct: 16 EGTPIEGP 23


>sp|PUR2_METST|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 KEGVPSEGP 10
KEG+ S GP
Sbjct: 84 KEGIHSVGP 92


>sp|Y584_METS5|UPF0282 protein Msed_0584|Metallosphaera sedula (strain ATCC 51363

Query: 3 EGVPSE 8
EGVPSE
Sbjct: 178 EGVPSE 183


>sp|PUR2_ARCFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KEGVPSEGP 10
+EG+P+ GP
Sbjct: 92 EEGIPAVGP 100


>sp|PUR2_PYRHO|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KEGVPSEGP 10
+EG+P+ GP
Sbjct: 85 EEGIPAVGP 93


>sp|Y2966_METMA|UPF0282 protein MM_2966|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AKEGVPSEG 9
A EG+ SEG
Sbjct: 131 ASEGISSEG 139




85|Sequence|421|430|PSEGPETKVE

***** No hits found ******


86|Sequence|426|435|ETKVENIGVK

>sp|AROK_METS3|SHIKIMATE kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 ETKVENIGVK 10
ETKV+NIG +
Sbjct: 277 ETKVDNIGCQ 286


>sp|QUEE_THEKO|7-CARBOXY-7-DEAZAGUANINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ETKVENI 7
ETKVEN+
Sbjct: 190 ETKVENV 196


>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ETKVENIGVK 10
E ENIG+K
Sbjct: 445 EKMKENIGIK 454


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 TKVENIGV 9
TK+ NIG+
Sbjct: 19 TKIRNIGI 26


>sp|HDRB1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit B1|Methanococcus

Query: 1 ETKVENI 7
ETKV+NI
Sbjct: 218 ETKVKNI 224


>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 TKVENIGV 9
T+V NIG+
Sbjct: 18 TRVRNIGI 25


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 TKVENIGV 9
T+V NIG+
Sbjct: 18 TRVRNIGI 25


>sp|EF2_SULAC|ELONGATION factor 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 TKVENIGV 9
T+V NIG+
Sbjct: 18 TRVRNIGI 25


>sp|MOAC_HALSA|PROBABLE cyclic pyranopterin monophosphate synthase|Halobacterium salinarum

Query: 2 TKVENIGV 9
T +EN+GV
Sbjct: 147 TAIENVGV 154


>sp|MOAC_HALS3|PROBABLE cyclic pyranopterin monophosphate synthase|Halobacterium salinarum

Query: 2 TKVENIGV 9
T +EN+GV
Sbjct: 147 TAIENVGV 154




87|Sequence|431|440|NIGVKTVTIT

>sp|NIFB_METIM|FEMO cofactor biosynthesis protein NifB|Methanocaldococcus infernus

Query: 1 NIGVKTVTIT 10
N+ V+T+T+T
Sbjct: 133 NLNVRTITVT 142


>sp|NIFB_METJA|FEMO cofactor biosynthesis protein NifB|Methanocaldococcus jannaschii

Query: 1 NIGVKTVTIT 10
++ VKTVT+T
Sbjct: 135 DLNVKTVTVT 144


>sp|RFRNP_METJA|RNA-FREE ribonuclease P|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IGVKTVT 8
+GVKTVT
Sbjct: 26 LGVKTVT 32


>sp|UPPS_METKA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanopyrus

Query: 1 NIGVKTVTI 9
++GVK VT+
Sbjct: 83 DLGVKAVTV 91


>sp|UPPS_SULAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (GGDP specific)|Sulfolobus acidocaldarius (strain ATCC

Query: 2 IGVKTVTI 9
IG+ TVT+
Sbjct: 74 IGISTVTV 81


>sp|G3PP_PYRFU|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NIGVKTV 7
N+G+KTV
Sbjct: 188 NVGMKTV 194


>sp|G3PP_PYRAB|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 1 NIGVKTV 7
N+G+KTV
Sbjct: 186 NVGMKTV 192




88|Sequence|436|445|TVTITWKEIP

>sp|AROK_METMA|SHIKIMATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 TWKEIP 10
TW EIP
Sbjct: 82 TWSEIP 87


>sp|NADE_AERPE|NH(3)-DEPENDENT NAD(+) synthetase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VTITWKEIP 10
+ I W+EIP
Sbjct: 232 LKIPWEEIP 240


>sp|KAE1B_HALWD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 VTITWKE 8
VT+TW++
Sbjct: 324 VTVTWRD 330


>sp|ACEA_HALVD|ISOCITRATE lyase|Haloferax volcanii (strain ATCC 29605

Query: 2 VTITWKEIP 10
V I W E+P
Sbjct: 196 VDIVWPEMP 204


>sp|AMTAB_PYRAB|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 1 TVTITWKEIP 10
T+ WK++P
Sbjct: 333 TIAAKWKQLP 342


>sp|AMTAB_PYRHO|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 1 TVTITWKEIP 10
T+ WK++P
Sbjct: 333 TIAAKWKQLP 342


>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 6 WKEIP 10
WKE+P
Sbjct: 91 WKEVP 95


>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 6 WKEIP 10
WKEIP
Sbjct: 549 WKEIP 553


>sp|RIBA_ARCFU|GTP cyclohydrolase-2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VTITWKEI 9
+ +TWK+I
Sbjct: 48 LALTWKQI 55


>sp|Y1281_METJA|UNCHARACTERIZED protein MJ1281|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 ITWKEI 9
+TWKE+
Sbjct: 636 LTWKEL 641


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 6 WKEIP 10
WKEIP
Sbjct: 550 WKEIP 554


>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain ATCC

Query: 6 WKEIP 10
WKEIP
Sbjct: 547 WKEIP 551


>sp|Y973_METJA|UNCHARACTERIZED protein MJ0973|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 WKEIP 10
WKE+P
Sbjct: 391 WKELP 395




89|Sequence|441|450|WKEIPKSERK

>sp|Y1683_ARCFU|VAPC ribonuclease AF_1683|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WKEIPKSERK 10
WK + +SERK
Sbjct: 134 WKSLDESERK 143


>sp|SYE_KORCO|GLUTAMATE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 WKEIPKSER 9
W ++PK+ER
Sbjct: 82 WPDLPKAER 90


>sp|EF2_CENSY|ELONGATION factor 2|Cenarchaeum symbiosum (strain A)

Query: 1 WKEIPKS 7
W E+PKS
Sbjct: 695 WAEVPKS 701


>sp|Y266_ARCFU|UNCHARACTERIZED transporter AF_0266|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WKEIPK 6
WK++PK
Sbjct: 57 WKDLPK 62


>sp|NADE_AERPE|NH(3)-DEPENDENT NAD(+) synthetase|Aeropyrum pernix (strain ATCC 700893

Query: 1 WKEIPKS 7
W+EIP++
Sbjct: 236 WEEIPRA 242


>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea (strain

Query: 2 KEIPKSER 9
K++P+SER
Sbjct: 575 KDLPESER 582


>sp|Y2262_NATPD|PUTATIVE heme-binding protein NP_2262A|Natronomonas pharaonis (strain ATCC

Query: 1 WKEIPKSERK 10
W++ P ER+
Sbjct: 27 WRDAPDRERE 36


>sp|T2MT_METTF|TYPE II restriction enzyme MthTI|Methanothermobacter thermautotrophicus

Query: 1 WKEIPKSERK 10
+K+ PK +RK
Sbjct: 237 YKQFPKKDRK 246


>sp|SPSS2_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocella arvoryzae (strain DSM 22066

Query: 2 KEIPKSER 9
KE+PK+E+
Sbjct: 194 KEVPKNEQ 201


>sp|IF2P_HALLT|PROBABLE translation initiation factor IF-2|Halorubrum lacusprofundi (strain

Query: 1 WKEIPKSERK 10
W EIP+ K
Sbjct: 554 WTEIPEKHAK 563


>sp|PSA_THEK1|PROTEASOME subunit alpha|Thermococcus sp. (strain JCM 11816

Query: 1 WKEIPKSE 8
WK++P+ E
Sbjct: 222 WKKLPREE 229


>sp|PSA_THEKO|PROTEASOME subunit alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WKEIPKSE 8
WK++P+ E
Sbjct: 222 WKKLPREE 229




90|Sequence|446|455|KSERKGIICN

>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 KSERKGI 7
KSER+GI
Sbjct: 334 KSERRGI 340


>sp|PGP_THEVO|PHOSPHOGLYCOLATE phosphatase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KSERKGII 8
K+E+KGII
Sbjct: 30 KAEKKGII 37


>sp|Y933_METJA|UNCHARACTERIZED membrane protein MJ0933|Methanocaldococcus jannaschii (strain ATCC

Query: 3 ERKGIICN 10
ERKGI+ N
Sbjct: 209 ERKGILNN 216




91|Sequence|451|460|GIICNYTIFY

>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GIICNYTIF 9
GI+C+ TIF
Sbjct: 785 GILCHNTIF 793


>sp|TRPD_METBU|ANTHRANILATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 GIICNYTI 8
GII NYT+
Sbjct: 239 GIISNYTL 246


>sp|HMDH_METJA|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ICNYTI 8
ICNY+I
Sbjct: 49 ICNYSI 54


>sp|TRPD_METHJ|ANTHRANILATE phosphoribosyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 1 GIICNYTI 8
G IC YT+
Sbjct: 241 GTICRYTL 248


>sp|GFCR_ARCFU|TRANSCRIPTIONAL regulator GfcR|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 CNYTIFY 10
C +TI+Y
Sbjct: 105 CEFTIYY 111


>sp|DPS_PYRFU|DNA protection during starvation protein|Pyrococcus furiosus (strain

Query: 3 ICNYT 7
ICNYT
Sbjct: 126 ICNYT 130


>sp|Y1141_METJA|UNCHARACTERIZED protein MJ1141|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GIICNYTIFY 10
G+ CN +FY
Sbjct: 166 GVACNRDLFY 175


>sp|RS27A_CALMQ|SMALL ribosomal subunit protein eS31|Caldivirga maquilingensis (strain

Query: 4 CNYTIF 9
C YTIF
Sbjct: 54 CGYTIF 59


>sp|RS27A_IGNH4|SMALL ribosomal subunit protein eS31|Ignicoccus hospitalis (strain

Query: 4 CNYTIF 9
C YTIF
Sbjct: 51 CGYTIF 56


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 GIICNYTIFY 10
G++ ++ IFY
Sbjct: 691 GVVSSFLIFY 700


>sp|ACYP_METHJ|ACYLPHOSPHATASE hungatei JF-1 (strain ATCC

Query: 3 ICNYTIF 9
+C Y+IF
Sbjct: 80 VCGYSIF 86


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GIICNYTIFY 10
G+I + T+FY
Sbjct: 516 GLILDRTLFY 525




92|Sequence|456|465|YTIFYQAEGG

>sp|PUS10_NITMS|TRNA pseudouridine synthase Pus10|Nitrosopumilus maritimus (strain SCM1)

Query: 1 YTIFYQAEGG 10
+T+F++ EGG
Sbjct: 335 FTLFFKFEGG 344


>sp|FTRL_ARCFU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Archaeoglobus fulgidus (strain

Query: 2 TIFYQAEGG 10
T+F +AEGG
Sbjct: 47 TVFGEAEGG 55


>sp|AATA_THEON|A-TYPE ATP synthase subunit A|Thermococcus onnurineus (strain NA1)

Query: 2 TIFYQAEGG 10
T F QA+GG
Sbjct: 217 TFFSQAKGG 225


>sp|AATA_THESI|A-TYPE ATP synthase subunit A|Thermococcus sp. (strain KI)

Query: 2 TIFYQAEGG 10
T F QA+GG
Sbjct: 217 TFFSQAKGG 225


>sp|AATA_THEKO|A-TYPE ATP synthase subunit A|Thermococcus kodakarensis (strain ATCC

Query: 2 TIFYQAEGG 10
T F QA+GG
Sbjct: 217 TFFSQAKGG 225


>sp|AATA_THESM|A-TYPE ATP synthase subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 2 TIFYQAEGG 10
T F QA+GG
Sbjct: 217 TFFPQAKGG 225


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TIFYQAEGG 10
T F QA+GG
Sbjct: 220 TFFPQAKGG 228


>sp|HICDH_PYRHO|ISOCITRATE/HOMOISOCITRATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 FYQAEGG 10
FY+ EGG
Sbjct: 33 FYEFEGG 39


>sp|ALAXM_METBF|ALANYL-TRNA editing protein AlaX-M|Methanosarcina barkeri (strain Fusaro /

Query: 2 TIFYQAEGG 10
T+FY GG
Sbjct: 33 TVFYPESGG 41


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TIFYQAEGG 10
T F QA+GG
Sbjct: 220 TFFPQAKGG 228


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 2 TIFYQAEGG 10
T F QA+GG
Sbjct: 220 TFFPQAKGG 228


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 TIFYQAEGG 10
TIFY GG
Sbjct: 533 TIFYPRAGG 541


>sp|RADB_METTH|DNA repair and recombination protein|Methanothermobacter

Query: 2 TIFYQAEGG 10
T+F EGG
Sbjct: 61 TVFIDTEGG 69




93|Sequence|461|470|QAEGGKGFSK

>sp|CARB2_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 1 QAEGGKGFSK 10
QAEGG ++K
Sbjct: 218 QAEGGTAYTK 227


>sp|ARLY_METMJ|ARGININOSUCCINATE lyase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 AEGGKGFS 9
AE G+GFS
Sbjct: 360 AEAGRGFS 367


>sp|MVK_SACS2|MEVALONATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GGKGFSK 10
GGKGF K
Sbjct: 165 GGKGFEK 171


>sp|PRIL_METJA|DNA primase large subunit PriL|Methanocaldococcus jannaschii (strain

Query: 1 QAEGGKGFS 9
Q +GGKG S
Sbjct: 359 QDDGGKGLS 367


>sp|PURP_KORCO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 AEGGKGFSK 10
A+GGKG+ K
Sbjct: 162 AKGGKGYFK 170


>sp|PURP2_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 2|Methanosarcina mazei (strain ATCC

Query: 2 AEGGKGF 8
A+GGKGF
Sbjct: 159 AKGGKGF 165


>sp|PURP_METAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina acetivorans (strain ATCC

Query: 2 AEGGKGF 8
A+GGKGF
Sbjct: 159 AKGGKGF 165


>sp|PURP1_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 1|Methanosarcina mazei (strain ATCC

Query: 2 AEGGKGF 8
A+GGKGF
Sbjct: 159 AKGGKGF 165


>sp|PURP_METTP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothrix thermoacetophila (strain

Query: 2 AEGGKGF 8
A+GGKGF
Sbjct: 159 AKGGKGF 165


>sp|PURP_METBF|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 2 AEGGKGF 8
A+GGKGF
Sbjct: 159 AKGGKGF 165


>sp|ARLY_METPE|ARGININOSUCCINATE lyase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 QAEGGKGFS 9
+ E G+GFS
Sbjct: 359 ETEAGRGFS 367


>sp|MCRAM_METAC|[METHYL coenzyme M reductase]-L-arginine

Query: 5 GKGFSK 10
GKGFSK
Sbjct: 118 GKGFSK 123


>sp|Y1385_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 1 QAEGGKGFS 9
Q EGG+G +
Sbjct: 318 QGEGGRGIN 326


>sp|PURP_SACS2|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Saccharolobus solfataricus (strain ATCC

Query: 2 AEGGKGF 8
A+GGKG+
Sbjct: 138 AKGGKGY 144


>sp|PURP_PYRFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 AEGGKGF 8
A+GGKG+
Sbjct: 136 AKGGKGY 142


>sp|PURP_SULTO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfurisphaera tokodaii (strain DSM

Query: 2 AEGGKGF 8
A+GGKG+
Sbjct: 138 AKGGKGY 144


>sp|PURP_SULAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 AEGGKGF 8
A+GGKG+
Sbjct: 139 AKGGKGY 145


>sp|HJC_SULAC|CROSSOVER junction endodeoxyribonuclease Hjc|Sulfolobus acidocaldarius

Query: 1 QAEGGKGFSK 10
QAEG K F+K
Sbjct: 70 QAEGIKEFAK 79


>sp|NIFE_METMI|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 1 QAEGGKGFSK 10
Q+EG K F+K
Sbjct: 188 QSEGFKSFNK 197


>sp|PURP_METBU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcoides burtonii (strain DSM

Query: 2 AEGGKGF 8
A+GG+GF
Sbjct: 158 AKGGRGF 164


>sp|PURP_ARCFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Archaeoglobus fulgidus (strain ATCC

Query: 2 AEGGKGF 8
A+GGKG+
Sbjct: 158 AKGGKGY 164


>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 1 QAEGGKGFSK 10
Q+EG K F+K
Sbjct: 188 QSEGFKSFNK 197




94|Sequence|466|475|KGFSKTVNSS

>sp|SYS_METS5|SERINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 KGFSKTVNSS 10
KGF T+NS+
Sbjct: 397 KGFVHTLNST 406


>sp|SYS_ARCFU|SERINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KGFSKTVNSS 10
KGF T+NS+
Sbjct: 395 KGFVHTLNST 404


>sp|RS2_METAR|SMALL ribosomal subunit protein uS2|Methanocella arvoryzae (strain DSM

Query: 1 KGFSKTVN 8
+GFS TVN
Sbjct: 194 QGFSYTVN 201




95|Sequence|471|480|TVNSSILQYG

>sp|RS6E_METAC|SMALL ribosomal subunit protein eS6|Methanosarcina acetivorans (strain

Query: 2 VNSSILQYG 10
VN+ I++YG
Sbjct: 108 VNAKIVEYG 116


>sp|RS6E_METMA|SMALL ribosomal subunit protein eS6|Methanosarcina mazei (strain ATCC

Query: 2 VNSSILQYG 10
VN+ +++YG
Sbjct: 108 VNAKVVEYG 116




96|Sequence|476|485|ILQYGLESLK

>sp|SECD_HALWD|PROTEIN-EXPORT membrane protein SecD|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LQYGLE 7
LQYGLE
Sbjct: 48 LQYGLE 53


>sp|TRUB_METM5|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C5

Query: 2 LQYGLESLK 10
L+YGL+ LK
Sbjct: 226 LEYGLQHLK 234


>sp|TRUB_METM6|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C6

Query: 2 LQYGLESLK 10
L+YGL+ LK
Sbjct: 226 LEYGLQHLK 234


>sp|TRUB_METMP|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain DSM

Query: 2 LQYGLESLK 10
L+YGL+ LK
Sbjct: 226 LEYGLQHLK 234


>sp|TRUB_METM7|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C7

Query: 2 LQYGLESLK 10
L+YGL+ LK
Sbjct: 226 LEYGLQHLK 234


>sp|ATGT_AERPE|TRNA-GUANINE(15) transglycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 4 YGLESL 9
YGLESL
Sbjct: 366 YGLESL 371


>sp|Y3532_METJA|UNCHARACTERIZED protein MJECL32|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QYGLESLK 10
+Y LESLK
Sbjct: 274 EYSLESLK 281




97|Sequence|481|490|LESLKRKTSY

>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 1 LESLKRKTSY 10
+E +KRK+SY
Sbjct: 271 VERIKRKSSY 280




98|Sequence|486|495|RKTSYIVQVM

>sp|IDI2_METJA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RKTSYIVQ 8
+KTSYIV+
Sbjct: 340 KKTSYIVK 347


>sp|RS24_NANEQ|SMALL ribosomal subunit protein eS24|Nanoarchaeum equitans (strain

Query: 2 KTSYIVQV 9
+T YI+QV
Sbjct: 17 RTEYIIQV 24




99|Sequence|491|500|IVQVMASTSA

***** No hits found ******


100|Sequence|496|505|ASTSAGGTNG

>sp|VHCB_METVO|POLYFERREDOXIN protein VhcB|Methanococcus voltae

Query: 1 ASTSAGGTNG 10
++ S GGTNG
Sbjct: 15 SANSCGGTNG 24


>sp|COFH2_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina barkeri (strain Fusaro

Query: 2 STSAGGTNG 10
ST++GG+NG
Sbjct: 324 STASGGSNG 332


>sp|PYLS_METTE|PYRROLYSINE--TRNA ligase|Methanosarcina thermophila

Query: 1 ASTSAGGT 8
ASTSA GT
Sbjct: 184 ASTSAQGT 191


>sp|Y2248_HALVD|UNCHARACTERIZED motility-related protein HVO_2248|Haloferax volcanii (strain ATCC

Query: 3 TSAGGTNG 10
TSAGG G
Sbjct: 216 TSAGGRKG 223




101|Sequence|501|510|GGTNGTSINF

>sp|Y952_PYRAE|UPF0215 protein PAE0952|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GGTNGTS 7
GGT+GTS
Sbjct: 38 GGTDGTS 44


>sp|LYSM_SACS2|HTH-TYPE transcriptional regulator LysM|Saccharolobus solfataricus (strain

Query: 2 GTNGTSIN 9
GTN TSIN
Sbjct: 110 GTNITSIN 117


>sp|VHCB_METVO|POLYFERREDOXIN protein VhcB|Methanococcus voltae

Query: 1 GGTNGTS 7
GGTNG S
Sbjct: 20 GGTNGIS 26


>sp|RL3_METTP|LARGE ribosomal subunit protein uL3|Methanothrix thermoacetophila (strain

Query: 2 GTNGTSI 8
GTNGT I
Sbjct: 268 GTNGTDI 274


>sp|Y103_METJA|UNCHARACTERIZED protein MJ0103|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TNGTSINF 10
TNGT +N+
Sbjct: 201 TNGTVLNY 208


>sp|LYSK_PYRHO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus horikoshii

Query: 2 GTNGTSINF 10
GTNG +I +
Sbjct: 142 GTNGVTIGY 150


>sp|AROB_SACS2|3-DEHYDROQUINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GGTNGTSIN 9
GG NG + N
Sbjct: 130 GGKNGVNFN 138


>sp|Y309_METBU|UPF0280 protein Mbur_0309|Methanococcoides burtonii (strain DSM 6242

Query: 2 GTNGTSINF 10
GT G SINF
Sbjct: 149 GTVGPSINF 157


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGTNGTSINF 10
GG N T++ F
Sbjct: 708 GGVNSTTVKF 717




102|Sequence|506|515|TSINFKTLSF

>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 NFKTLSF 10
NF TLSF
Sbjct: 430 NFNTLSF 436


>sp|EF1A_THEAC|ELONGATION factor 1-alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 SINFKTLSF 10
SI FK +SF
Sbjct: 175 SIGFKDISF 183




103|Sequence|511|520|KTLSFSVFEI

>sp|GGGPS_SULAC|GERANYLGERANYLGLYCERYL phosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KTLSFSVFE 9
KTL FS+F+
Sbjct: 19 KTLHFSLFD 27




104|Sequence|516|525|SVFEIILITS

>sp|Y2114_ARCFU|UNCHARACTERIZED protein AF_2114|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VFEIILITS 10
VFEI+LIT+
Sbjct: 115 VFEIVLITN 123




105|Sequence|521|530|ILITSLIGGG

>sp|IDI2_PICTO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Picrophilus torridus (strain ATCC 700027

Query: 1 ILITSLIGG 9
ILI+S+ GG
Sbjct: 58 ILISSMTGG 66


>sp|ACD_METJA|ACETATE--COA ligase [ADP-forming]|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LITSLIGG 9
LITS +GG
Sbjct: 410 LITSFVGG 417


>sp|G1PDH_METVS|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus vannielii (strain ATCC 35089

Query: 2 LITSLIGGG 10
L+ SLIG G
Sbjct: 200 LVKSLIGSG 208


>sp|Y1196_METJA|PUTATIVE amino-acid transporter MJ1196|Methanocaldococcus jannaschii

Query: 3 ITSLIGGG 10
ITS++GGG
Sbjct: 14 ITSIVGGG 21


>sp|HEM3_SACI7|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain

Query: 3 ITSLIGGG 10
+ SL+GGG
Sbjct: 225 VISLVGGG 232


>sp|HEM3_SACI6|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 ITSLIGGG 10
+ SL+GGG
Sbjct: 225 VISLVGGG 232


>sp|HEM3_SACI4|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain M.14.25

Query: 3 ITSLIGGG 10
+ SL+GGG
Sbjct: 225 VISLVGGG 232


>sp|HEM3_SACI3|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain M.16.27)

Query: 3 ITSLIGGG 10
+ SL+GGG
Sbjct: 225 VISLVGGG 232


>sp|HEM3_SACI2|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain L.S.2.15

Query: 3 ITSLIGGG 10
+ SL+GGG
Sbjct: 225 VISLVGGG 232


>sp|HEM3_SACI1|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain

Query: 3 ITSLIGGG 10
+ SL+GGG
Sbjct: 225 VISLVGGG 232




106|Sequence|526|535|LIGGGLLILI

>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 3 GGGLLILI 10
GGGLL+L+
Sbjct: 109 GGGLLVLL 116


>sp|MTAB_METBF|METHANOL--CORRINOID protein co-methyltransferase|Methanosarcina barkeri (strain Fusaro

Query: 1 LIGGGLL 7
IGGGLL
Sbjct: 228 FIGGGLL 234


>sp|CDC6_METB6|ORC1-TYPE DNA replication protein|Methanoregula boonei (strain DSM 21154

Query: 3 GGGLLILI 10
GGG+L+++
Sbjct: 155 GGGVLVIV 162


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 1 LIGGGLLIL 9
L+ GG+L+L
Sbjct: 277 LVEGGMLVL 285


>sp|AATC_METTP|A-TYPE ATP synthase subunit C|Methanothrix thermoacetophila (strain DSM

Query: 2 IGGGLLI 8
+GGGLL+
Sbjct: 200 VGGGLLL 206


>sp|AGL6_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl6|Haloferax volcanii

Query: 2 IGGGLLIL 9
IGGGLL L
Sbjct: 306 IGGGLLTL 313




107|Sequence|531|540|LLILIILTVA

***** No hits found ******


108|Sequence|536|545|ILTVAYGLKK

>sp|PSB_NATPD|PROTEASOME subunit beta|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LTVAYG 7
LTVAYG
Sbjct: 175 LTVAYG 180


>sp|PSB1_HALMA|PROTEASOME subunit beta 1|Haloarcula marismortui (strain ATCC 43049

Query: 2 LTVAYG 7
LTVAYG
Sbjct: 177 LTVAYG 182


>sp|PSTB1_NATPD|PHOSPHATE import ATP-binding protein PstB|Natronomonas pharaonis (strain ATCC

Query: 4 VAYGLK 9
VAYGLK
Sbjct: 138 VAYGLK 143


>sp|PELO_PYRFU|PROTEIN pelota homolog|Pyrococcus furiosus (strain ATCC 43587

Query: 4 VAYGLKK 10
VAYGLK+
Sbjct: 280 VAYGLKE 286


>sp|GLPK_SACI7|GLYCEROL kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 ILTVAYGLKK 10
+ T+A+GL+K
Sbjct: 283 LTTIAWGLEK 292


>sp|GLPK_SACI2|GLYCEROL kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 ILTVAYGLKK 10
+ T+A+GL+K
Sbjct: 283 LTTIAWGLEK 292


>sp|GLPK_SACI3|GLYCEROL kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 ILTVAYGLKK 10
+ T+A+GL+K
Sbjct: 283 LTTIAWGLEK 292


>sp|GLPK_SACI6|GLYCEROL kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 ILTVAYGLKK 10
+ T+A+GL+K
Sbjct: 283 LTTIAWGLEK 292


>sp|GLPK_SACI4|GLYCEROL kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 ILTVAYGLKK 10
+ T+A+GL+K
Sbjct: 283 LTTIAWGLEK 292


>sp|GLPK1_SACS2|GLYCEROL kinase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ILTVAYGLKK 10
+ T+A+GL+K
Sbjct: 283 LTTIAWGLEK 292


>sp|NAOX_METJA|NADH oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LTVAYGLK 9
L +AYGLK
Sbjct: 162 LEMAYGLK 169




109|Sequence|541|550|YGLKKPNKLT

>sp|RL15_METTH|LARGE ribosomal subunit protein uL15|Methanothermobacter

Query: 1 YGLKKPNKL 9
YG K+P KL
Sbjct: 58 YGFKRPQKL 66


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YGLKKPNKLT 10
YG++KPN +
Sbjct: 361 YGVEKPNGIV 370


>sp|TRPF_METTH|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GLKKPNKL 9
GL+KP++L
Sbjct: 228 GLQKPSRL 235


>sp|RNZ_METKA|RIBONUCLEASE Z|Methanopyrus kandleri (strain AV19 /

Query: 1 YGLKKPNKLT 10
Y L KP K++
Sbjct: 176 YSLTKPGKIS 185


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 LKKPNKL 9
LKKPN++
Sbjct: 843 LKKPNRI 849


>sp|Y687_METJA|UNCHARACTERIZED protein MJ0687|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGLKKPNKL 9
Y +KPNK
Sbjct: 65 YAFEKPNKF 73


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 YGLKKPNKL 9
YG++KP L
Sbjct: 938 YGVEKPEDL 946


>sp|Y457_METJA|UNCHARACTERIZED metallohydrolase MJ0457|Methanocaldococcus jannaschii (strain

Query: 1 YGLKKPN 7
YG+++PN
Sbjct: 63 YGIERPN 69


>sp|TRPF_METVS|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GLKKPNKL 9
G+K PN+L
Sbjct: 7 GIKTPNEL 14


>sp|RL15_METST|LARGE ribosomal subunit protein uL15|Methanosphaera stadtmanae (strain

Query: 1 YGLKKPNK 8
YG K+P K
Sbjct: 58 YGFKRPQK 65




110|Sequence|546|555|PNKLTHLCWP

>sp|PNPH_THEKO|PROBABLE 6-oxopurine nucleoside phosphorylase|Thermococcus kodakarensis

Query: 1 PNKLTH 6
PNKLTH
Sbjct: 219 PNKLTH 224


>sp|NASA_HALMT|ASSIMILATORY nitrate reductase|Haloferax mediterranei (strain ATCC 33500

Query: 1 PNKLTHLCW 9
PN THL W
Sbjct: 173 PNAETHLVW 181


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 4 LTHLCWP 10
LTH WP
Sbjct: 224 LTHTAWP 230


>sp|RFCL_HALWD|REPLICATION factor C large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 4 LTHLCWP 10
+THLC P
Sbjct: 373 ITHLCKP 379


>sp|GPT_SULAC|PUTATIVE UDP-N-acetylglucosamine--dolichyl-phosphate

Query: 1 PNKLTHL 7
PN LTH+
Sbjct: 285 PNSLTHI 291


>sp|SPEB_METJA|AGMATINASE jannaschii (strain ATCC 43067

Query: 2 NKLTHLC 8
NKL+H C
Sbjct: 145 NKLSHAC 151


>sp|BIOB_METMP|BIOTIN synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PNKLTHLC 8
PNK+ LC
Sbjct: 272 PNKVIRLC 279


>sp|BIOB_METM5|BIOTIN synthase|Methanococcus maripaludis (strain C5 /

Query: 1 PNKLTHLC 8
PNK+ LC
Sbjct: 272 PNKVIRLC 279


>sp|FPRA_METTH|COENZYME F420H(2) oxidase|Methanothermobacter thermautotrophicus (strain

Query: 6 HLCWP 10
HLC+P
Sbjct: 175 HLCYP 179


>sp|NADK_THESM|NAD kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 PNKLTHL 7
P K+THL
Sbjct: 145 PGKVTHL 151


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 3 KLTHLC 8
KLTH C
Sbjct: 712 KLTHYC 717




111|Sequence|551|560|HLCWPTVPNP

>sp|ACEA_HALVD|ISOCITRATE lyase|Haloferax volcanii (strain ATCC 29605

Query: 2 LCWPTVPNP 10
+ WP +PNP
Sbjct: 198 IVWPEMPNP 206


>sp|GATA_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 5 PTVPNP 10
PT+PNP
Sbjct: 391 PTMPNP 396


>sp|GATA_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 5 PTVPNP 10
PT+PNP
Sbjct: 391 PTMPNP 396


>sp|FLAB3_METJA|FLAGELLIN B3|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WPTVPNP 10
WP + NP
Sbjct: 131 WPNIANP 137


>sp|GATA_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 5 PTVPNP 10
PT+PNP
Sbjct: 390 PTMPNP 395


>sp|RIFK_NATPD|RIBOFLAVIN kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LCWPTV 7
CWP V
Sbjct: 174 FCWPAV 179


>sp|DYRA_HALVD|DIHYDROFOLATE reductase HdrA|Haloferax volcanii (strain ATCC 29605

Query: 2 LCWPTVP 8
L WP++P
Sbjct: 21 LPWPSIP 27


>sp|CYAS_METMJ|CYSTEATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 WPTVPNP 10
W TVP P
Sbjct: 161 WTTVPAP 167


>sp|Y1856_ARCFU|UNCHARACTERIZED protein AF_1856|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HLCWPTVP 8
HLC +VP
Sbjct: 343 HLCGDSVP 350


>sp|RL14_PYRIL|LARGE ribosomal subunit protein uL14|Pyrobaculum islandicum (strain DSM

Query: 2 LCWPTVPN 9
L WPT+ N
Sbjct: 131 LRWPTIAN 138


>sp|VORD_PYRAB|KETOISOVALERATE oxidoreductase subunit VorD|Pyrococcus abyssi (strain GE5 /

Query: 1 HLCWPTVPNP 10
++CW P P
Sbjct: 57 YICWKFCPEP 66


>sp|RL14_PYRAR|LARGE ribosomal subunit protein uL14|Pyrobaculum arsenaticum (strain DSM

Query: 2 LCWPTVPN 9
L WPT+ N
Sbjct: 131 LRWPTIAN 138


>sp|RL14_PYRCJ|LARGE ribosomal subunit protein uL14|Pyrobaculum calidifontis (strain DSM

Query: 2 LCWPTVPN 9
L WPT+ N
Sbjct: 131 LRWPTIAN 138


>sp|RL14_PYRAE|LARGE ribosomal subunit protein uL14|Pyrobaculum aerophilum (strain ATCC

Query: 2 LCWPTVPN 9
L WPT+ N
Sbjct: 131 LRWPTIAN 138


>sp|VORD_PYRHO|KETOISOVALERATE oxidoreductase subunit VorD|Pyrococcus horikoshii (strain ATCC

Query: 1 HLCWPTVPNP 10
++CW P P
Sbjct: 57 YICWKYCPEP 66




112|Sequence|556|565|TVPNPAESSI

>sp|KPRS_METKA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanopyrus kandleri (strain AV19 /

Query: 1 TVPNPAES 8
TVPNP E
Sbjct: 268 TVPNPFEK 275


>sp|RS4E_CALMQ|SMALL ribosomal subunit protein eS4|Caldivirga maquilingensis (strain

Query: 3 PNPAESSI 10
P+PA SSI
Sbjct: 30 PHPANSSI 37


>sp|IF1A_SULTO|TRANSLATION initiation factor 1A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VPNPAESSI 10
VP PAE +
Sbjct: 15 VPKPAEGEV 23




113|Sequence|561|570|AESSIATWHG

>sp|RBL_METJA|RIBULOSE bisphosphate carboxylase|Methanocaldococcus jannaschii (strain

Query: 1 AESSIATW 8
ESSI TW
Sbjct: 35 GESSIGTW 42


>sp|RBL_PYRHO|RIBULOSE bisphosphate carboxylase|Pyrococcus horikoshii (strain ATCC

Query: 1 AESSIATW 8
+ESSI TW
Sbjct: 48 SESSIGTW 55


>sp|RBL_PYRFU|RIBULOSE bisphosphate carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AESSIATW 8
+ESSI TW
Sbjct: 43 SESSIGTW 50


>sp|RBL_PYRAB|RIBULOSE bisphosphate carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 AESSIATW 8
+ESSI TW
Sbjct: 47 SESSIGTW 54


>sp|SYY_SULTO|TYROSINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 IATWHG 10
+ATWH
Sbjct: 75 VATWHA 80


>sp|SYY_SULAC|TYROSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 IATWHG 10
+ATWH
Sbjct: 70 VATWHA 75


>sp|RBL_THEON|RIBULOSE bisphosphate carboxylase|Thermococcus onnurineus (strain NA1)

Query: 1 AESSIATW 8
AESS TW
Sbjct: 48 AESSTGTW 55


>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 1 AESSIATW 8
AESS TW
Sbjct: 48 AESSTGTW 55


>sp|SYY2_PYRAE|TYROSINE--TRNA ligase 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 IATWHG 10
+ATWH
Sbjct: 60 VATWHA 65


>sp|AROK_METAC|SHIKIMATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 SSIATWHG 10
++IATW G
Sbjct: 17 NAIATWKG 24


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 ESSIATW 8
+SS+ATW
Sbjct: 535 DSSVATW 541


>sp|AROK_METMA|SHIKIMATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 SSIATWHG 10
++IATW G
Sbjct: 17 NAIATWKG 24




114|Sequence|566|575|ATWHGDDFKD

>sp|ENO2_METHJ|ENOLASE 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ATWHGDDFKD 10
A W G DF++
Sbjct: 155 ANWQGSDFQE 164


>sp|CETZ2_HALVD|TUBULIN-LIKE protein CetZ2|Haloferax volcanii (strain ATCC 29605

Query: 3 WHGDDFKD 10
WH DD D
Sbjct: 351 WHSDDLDD 358


>sp|Y1786_ARCFU|UNCHARACTERIZED protein AF_1786|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 HGDDFKD 10
HGD FKD
Sbjct: 142 HGDAFKD 148


>sp|SYE_METJA|GLUTAMATE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ATWHGDDFK 9
A +H DDFK
Sbjct: 472 AKYHSDDFK 480


>sp|SYE_META3|GLUTAMATE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 ATWHGDDFK 9
A +H DDFK
Sbjct: 480 AKYHSDDFK 488


>sp|EF2_METBU|ELONGATION factor 2|Methanococcoides burtonii (strain DSM 6242

Query: 1 ATWHGD 6
A WHGD
Sbjct: 269 AIWHGD 274


>sp|Y1656_ARCFU|UNCHARACTERIZED protein AF_1656|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TWHGDDF 8
+W GDDF
Sbjct: 86 SWDGDDF 92


>sp|Y799_METJA|UNCHARACTERIZED protein MJ0799|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ATWHGDDFKD 10
A WH DD D
Sbjct: 26 AFWHFDDLID 35


>sp|ENO1_METHJ|ENOLASE 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ATWHGDDFKD 10
A W G DF++
Sbjct: 154 ANWQGADFQE 163


>sp|AGLJ_HALVD|GLYCOSYLTRANSFERASE AglJ|Haloferax volcanii (strain ATCC 29605

Query: 4 HGDDFKD 10
HG DF+D
Sbjct: 142 HGQDFRD 148


>sp|Y1402_METJA|UNCHARACTERIZED protein MJ1402|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ATWHGDD 7
ATW GDD
Sbjct: 176 ATWTGDD 182


>sp|PDXT_THEON|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Thermococcus onnurineus (strain

Query: 3 WHGDD 7
WHGD+
Sbjct: 160 WHGDE 164


>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 WHGDD 7
WHGD+
Sbjct: 271 WHGDE 275


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 3 WHGDD 7
WHGD+
Sbjct: 271 WHGDE 275


>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 WHGDD 7
WHGD+
Sbjct: 271 WHGDE 275


>sp|HEM1_METMA|GLUTAMYL-TRNA reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ATWHGD 6
+ WHGD
Sbjct: 21 SAWHGD 26


>sp|HEM1_METBF|GLUTAMYL-TRNA reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ATWHGD 6
+ WHGD
Sbjct: 21 SAWHGD 26


>sp|HEM1_METAC|GLUTAMYL-TRNA reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ATWHGD 6
+ WHGD
Sbjct: 21 SAWHGD 26


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 WHGDDFK 9
W+ DDFK
Sbjct: 159 WYMDDFK 165


>sp|EF2_METPE|ELONGATION factor 2|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 WHGD 6
WHGD
Sbjct: 271 WHGD 274


>sp|EF2_METB6|ELONGATION factor 2|Methanoregula boonei (strain DSM 21154

Query: 3 WHGD 6
WHGD
Sbjct: 271 WHGD 274


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 3 WHGD 6
WHGD
Sbjct: 272 WHGD 275


>sp|YR18_THEPE|UNCHARACTERIZED 18.7 kDa protein in|Thermofilum pendens

Query: 4 HGDDFKD 10
HGD F D
Sbjct: 61 HGDKFTD 67


>sp|DPOL1_SULOH|DNA polymerase 1|Sulfurisphaera ohwakuensis

Query: 2 TWHGDDF 8
T++GDDF
Sbjct: 310 TFNGDDF 316


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 TWHGDDF 8
T++GDDF
Sbjct: 311 TFNGDDF 317


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 TWHGDDF 8
T++GDDF
Sbjct: 310 TFNGDDF 316


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 WHGDDFK 9
W+ DDFK
Sbjct: 159 WYLDDFK 165


>sp|RL30_METBU|LARGE ribosomal subunit protein uL30|Methanococcoides burtonii (strain

Query: 4 HGDDFK 9
HGDD K
Sbjct: 141 HGDDIK 146


>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 WHGDDFK 9
W+ DDFK
Sbjct: 159 WYLDDFK 165


>sp|FLPA_PYRAR|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum arsenaticum (strain

Query: 3 WHGDDFKD 10
W GD++++
Sbjct: 48 WGGDEYRE 55


>sp|FLPA_PYRAE|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum aerophilum (strain

Query: 3 WHGDDFKD 10
W GD++++
Sbjct: 48 WGGDEYRE 55


>sp|JAMM1_HALVD|DESAMPYLASE volcanii (strain ATCC 29605

Query: 3 WHGDDFKD 10
W GD+F++
Sbjct: 126 WTGDEFRE 133


>sp|ENGB_NATPD|PROBABLE GTP-binding protein EngB|Natronomonas pharaonis (strain ATCC

Query: 3 WHGDDF 8
W GDDF
Sbjct: 52 WAGDDF 57


>sp|RNH2_METMA|RIBONUCLEASE HII|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 HGDDFKD 10
HG DF D
Sbjct: 195 HGGDFPD 201


>sp|SYC_PYRHO|CYSTEINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TWHGDDFK 9
TW +DFK
Sbjct: 338 TWDENDFK 345


>sp|PSTB2_HALMA|PHOSPHATE import ATP-binding protein PstB|Haloarcula marismortui (strain

Query: 3 WHGDD 7
W+GDD
Sbjct: 62 WYGDD 66


>sp|MRE11_PYRAB|DNA double-strand break repair protein|Pyrococcus abyssi (strain GE5 /

Query: 2 TWHGDDFKD 10
TW+G FK+
Sbjct: 241 TWNGFQFKE 249




115|Sequence|571|580|DDFKDKLNLK

>sp|G3P_METFO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium formicicum

Query: 1 DDFKDKLN 8
DD KDKLN
Sbjct: 236 DDIKDKLN 243


>sp|Y175_METJA|UNCHARACTERIZED protein MJ0175|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DDFKDKLN 8
D+FKDKLN
Sbjct: 63 DEFKDKLN 70


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 DDFKDKLNL 9
D+ KD+LNL
Sbjct: 109 DEIKDRLNL 117


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DDFKDKLN 8
DDFK+K+N
Sbjct: 362 DDFKNKIN 369


>sp|PSA_METS3|PROTEASOME subunit alpha|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DDFKDKLNL 9
D +KD +NL
Sbjct: 179 DQYKDDMNL 187


>sp|G3P_METBR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium bryantii

Query: 1 DDFKDKLN 8
DD K+KLN
Sbjct: 236 DDIKEKLN 243


>sp|ACDG2_METMA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina mazei

Query: 2 DFKDKLNLK 10
D +DKLN+K
Sbjct: 439 DIEDKLNVK 447


>sp|ACDG1_METMA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina mazei

Query: 2 DFKDKLNLK 10
D +DKLN+K
Sbjct: 439 DIEDKLNVK 447


>sp|CDPAS_SULAC|CDP-ARCHAEOL synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DFKDKLN 8
DFK KLN
Sbjct: 31 DFKRKLN 37


>sp|Y886_HYPBU|UPF0173 metal-dependent hydrolase Hbut_0886|Hyperthermus butylicus

Query: 1 DDFKDKLNL 9
+D++DK++L
Sbjct: 37 EDYRDKVDL 45


>sp|Y762_METJA|UNCHARACTERIZED transporter MJ0762|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FKDKLN 8
FKDK+N
Sbjct: 337 FKDKIN 342


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 DDFKDKLNL 9
+ FKD LNL
Sbjct: 126 ESFKDPLNL 134




116|Sequence|576|585|KLNLKESDDS

>sp|CHEB_THEKO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Thermococcus

Query: 1 KLNLKESDD 9
KLN+KE++D
Sbjct: 217 KLNVKEAED 225


>sp|AROA_KORCO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 KLNLKESDD 9
KLNLK+S D
Sbjct: 296 KLNLKDSPD 304


>sp|RS3_SACS2|SMALL ribosomal subunit protein uS3|Saccharolobus solfataricus (strain

Query: 1 KLNLKES 7
K+NLKES
Sbjct: 192 KINLKES 198


>sp|AMPD_METTH|ANHYDROMEVALONATE phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 3 NLKESD 8
NLKESD
Sbjct: 41 NLKESD 46


>sp|RIFK_SACS2|RIBOFLAVIN kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KLNLKESDD 9
KLNLK+ D+
Sbjct: 160 KLNLKDGDE 168




117|Sequence|581|590|ESDDSVNTED

>sp|PYRG_METTH|CTP synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 SDDSVNTED 10
+DD+VN ED
Sbjct: 335 ADDAVNEED 343


>sp|T1S1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 1 ESDDSVNTE 9
+++DSVNTE
Sbjct: 330 KNNDSVNTE 338




118|Sequence|586|595|VNTEDRILKP

>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 VNTEDRILKP 10
V++EDR+ KP
Sbjct: 56 VHSEDRLTKP 65


>sp|MOAA_THEVO|PROBABLE GTP 3',8-cyclase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VNTEDRILK 9
VN+ DRI+K
Sbjct: 131 VNSRDRIIK 139


>sp|CSX1_METJA|CRISPR system endoribonuclease Csx1|Methanocaldococcus jannaschii (strain

Query: 1 VNTEDRILK 9
+N ED+ILK
Sbjct: 282 INPEDKILK 290


>sp|RNZ_METS5|RIBONUCLEASE Z|Metallosphaera sedula (strain ATCC 51363

Query: 5 DRILKP 10
DR+LKP
Sbjct: 178 DRVLKP 183


>sp|Y1470_META3|UNCHARACTERIZED solute-binding protein Maeo_1470|Methanococcus aeolicus (strain

Query: 2 NTEDRILKP 10
NTE +L+P
Sbjct: 223 NTESEVLEP 231




119|Sequence|591|600|RILKPCSTPS

>sp|SECE_HALWD|PROTEIN translocase subunit SecE|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RILKPCSTPS 10
R+LK STPS
Sbjct: 12 RVLKLASTPS 21


>sp|SECE_HALMT|PROTEIN translocase subunit SecE|Haloferax mediterranei (strain ATCC

Query: 1 RILKPCSTPS 10
R+LK STPS
Sbjct: 12 RVLKLASTPS 21


>sp|SECE_HALLT|PROTEIN translocase subunit SecE|Halorubrum lacusprofundi (strain ATCC

Query: 1 RILKPCSTPS 10
R+LK STPS
Sbjct: 12 RVLKLASTPS 21


>sp|IF2P_METM7|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 ILKPCSTP 9
ILK C TP
Sbjct: 117 ILKQCKTP 124


>sp|IF2P_METM6|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 ILKPCSTP 9
ILK C TP
Sbjct: 117 ILKQCKTP 124


>sp|IF2P_METM5|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 ILKPCSTP 9
ILK C TP
Sbjct: 117 ILKQCKTP 124


>sp|IF2P_METMP|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 ILKPCSTP 9
ILK C TP
Sbjct: 117 ILKQCKTP 124


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii (strain

Query: 2 ILKPCSTP 9
ILK C TP
Sbjct: 117 ILKQCKTP 124


>sp|SECE_HALMA|PROTEIN translocase subunit SecE|Haloarcula marismortui (strain ATCC

Query: 1 RILKPCSTPS 10
R+LK STPS
Sbjct: 12 RVLKLASTPS 21


>sp|SECE_HALSA|PROTEIN translocase subunit SecE|Halobacterium salinarum (strain ATCC

Query: 1 RILKPCSTPS 10
R+L+ STPS
Sbjct: 12 RVLRLASTPS 21


>sp|SECE_HALS3|PROTEIN translocase subunit SecE|Halobacterium salinarum (strain ATCC

Query: 1 RILKPCSTPS 10
R+L+ STPS
Sbjct: 12 RVLRLASTPS 21


>sp|CDPAS_ARCFU|CDP-ARCHAEOL synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ILKPCSTPS 10
+L PC TP+
Sbjct: 11 LLLPCYTPN 19


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RILKPCSTP 9
+I K C TP
Sbjct: 21 KICKSCQTP 29


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 RILKPCSTP 9
+I K C TP
Sbjct: 21 KICKSCKTP 29


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 RILKPCSTP 9
+I K C TP
Sbjct: 21 KICKSCKTP 29


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 RILKPCSTP 9
+I K C TP
Sbjct: 21 KICKSCKTP 29


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 RILKPCSTP 9
+I K C TP
Sbjct: 21 KICKSCKTP 29


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 RILKPCSTP 9
+I K C TP
Sbjct: 21 KICKSCKTP 29


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 RILKPCSTP 9
+I K C TP
Sbjct: 21 KICKSCKTP 29


>sp|PORB_METJA|PYRUVATE synthase subunit PorB|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RILKPCST 8
++L+PC+T
Sbjct: 213 QVLQPCTT 220


>sp|SECE_NATPD|PROTEIN translocase subunit SecE|Natronomonas pharaonis (strain ATCC

Query: 1 RILKPCSTPS 10
R+LK STP+
Sbjct: 12 RVLKLASTPT 21




120|Sequence|596|605|CSTPSDKLVI

>sp|RS24_METHJ|SMALL ribosomal subunit protein eS24|Methanospirillum hungatei JF-1

Query: 2 STPSDKLVI 10
S P D+LVI
Sbjct: 44 SAPKDQLVI 52


>sp|KCY_PYRHO|CYTIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PSDKLVI 10
P DKLVI
Sbjct: 2 PKDKLVI 8


>sp|Y1033_PYRHO|UPF0310 protein PH1033|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PSDKLVI 10
P DKLVI
Sbjct: 37 PGDKLVI 43


>sp|MFNB_METS3|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 TPSDKLV 9
TP DKLV
Sbjct: 49 TPEDKLV 55


>sp|CIMA_METJA|(R)-CITRAMALATE synthase CimA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TPSDKLVI 10
TP+DKL I
Sbjct: 22 TPNDKLEI 29




121|Sequence|601|610|DKLVIDKLVV

>sp|ACDB1_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 2 KLVIDKLVV 10
K+ IDKLV+
Sbjct: 454 KITIDKLVI 462


>sp|SYY_METKA|TYROSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 KLVIDKLV 9
KLVIDK++
Sbjct: 50 KLVIDKMI 57




122|Sequence|606|615|DKLVVNFGNV

>sp|SYW_SULTO|TRYPTOPHAN--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DKLVVNFG 8
DKL+V FG
Sbjct: 19 DKLIVQFG 26


>sp|SYW_SACS2|TRYPTOPHAN--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DKLVVNFG 8
DKL+V FG
Sbjct: 19 DKLIVQFG 26


>sp|SYW_SULAC|TRYPTOPHAN--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DKLVVNFG 8
DKL+V FG
Sbjct: 19 DKLIVQFG 26


>sp|PFDA_METMA|PREFOLDIN subunit alpha|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DKLVVNFG 8
DK+VVN G
Sbjct: 79 DKVVVNLG 86


>sp|MCRC_METJA|METHYL-COENZYME M reductase I operon|Methanocaldococcus jannaschii (strain ATCC

Query: 4 VVNFGNV 10
VV+FGNV
Sbjct: 109 VVHFGNV 115


>sp|GUAA_PYRAE|GMP synthase [glutamine-hydrolyzing]|Pyrobaculum aerophilum (strain

Query: 3 LVVNFG 8
LVVNFG
Sbjct: 5 LVVNFG 10


>sp|DTDA_THEON|D-AMINOACYL-TRNA deacylase|Thermococcus onnurineus (strain NA1)

Query: 1 DKLVVNFG 8
+KLV NFG
Sbjct: 18 EKLVENFG 25


>sp|DTDA_THEGJ|D-AMINOACYL-TRNA deacylase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DKLVVNFG 8
+KLV NFG
Sbjct: 18 EKLVENFG 25


>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 DKLVVNFGNV 10
D VV+FG+V
Sbjct: 59 DAAVVDFGSV 68


>sp|KADA_THESM|ADENYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 4 VVNFGNV 10
VVNFG++
Sbjct: 32 VVNFGDI 38


>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 DKLVVNFGNV 10
D +V+NF N+
Sbjct: 404 DVIVLNFANM 413


>sp|GPMI2_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina acetivorans (strain ATCC

Query: 1 DKLVVNFGNV 10
D +V+NF N+
Sbjct: 400 DVIVLNFANM 409


>sp|GPMI1_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 DKLVVNFGNV 10
D +V+NF N+
Sbjct: 397 DVIVLNFANM 406


>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 DKLVVNFGNV 10
D +V+NF N+
Sbjct: 394 DVIVLNFANM 403


>sp|DTDA_THEKO|D-AMINOACYL-TRNA deacylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DKLVVNFG 8
+KL+ NFG
Sbjct: 18 EKLIENFG 25


>sp|DTDA_PYRFU|D-AMINOACYL-TRNA deacylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DKLVVNFG 8
+KL+ NFG
Sbjct: 18 EKLIENFG 25


>sp|RL5_ARCFU|LARGE ribosomal subunit protein uL5|Archaeoglobus fulgidus (strain ATCC

Query: 1 DKLVVNFG 8
DK+V+N G
Sbjct: 22 DKVVINIG 29


>sp|RL5_PICTO|LARGE ribosomal subunit protein uL5|Picrophilus torridus (strain ATCC

Query: 1 DKLVVNFG 8
DK+VVN G
Sbjct: 15 DKVVVNIG 22




123|Sequence|611|620|NFGNVLQEIF

>sp|ARCH_METAC|PROTEIN archease|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FGNVLQEIF 10
+GN L+E+F
Sbjct: 22 YGNTLKEVF 30


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GNVLQEIF 10
GNV++E+F
Sbjct: 502 GNVVKEVF 509


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GNVLQEIF 10
G+VL+E+F
Sbjct: 131 GDVLKEVF 138


>sp|Y599_METJA|UNCHARACTERIZED protein MJ0599|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NFGNVLQE 8
NFGN++ E
Sbjct: 32 NFGNIIIE 39


>sp|RPO10_METJA|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanocaldococcus jannaschii

Query: 3 GNVLQEIF 10
GNV+ E+F
Sbjct: 11 GNVIAEVF 18


>sp|WTPA_PYRAB|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus abyssi (strain GE5 /

Query: 2 FGNVLQEI 9
FGNV +EI
Sbjct: 329 FGNVPEEI 336


>sp|WTPA_THEKO|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FGNVLQEI 9
FGNV +EI
Sbjct: 333 FGNVPEEI 340


>sp|Y664_METJA|UNCHARACTERIZED protein MJ0664|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NFGNVLQEIF 10
N G VL E+F
Sbjct: 10 NMGEVLNELF 19


>sp|DGGGP_METJA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 FGNVLQEIF 10
+GNV+ +IF
Sbjct: 57 YGNVINDIF 65


>sp|RNP3_METM7|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C7 /

Query: 1 NFGNVLQ 7
NFGN+L+
Sbjct: 136 NFGNLLK 142


>sp|RNP3_METM6|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C6 /

Query: 1 NFGNVLQ 7
NFGN+L+
Sbjct: 136 NFGNLLK 142




124|Sequence|616|625|LQEIFTDEAR

>sp|METK_HALSA|S-ADENOSYLMETHIONINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LQEIFTDE 8
LQ++FTD+
Sbjct: 148 LQDVFTDD 155


>sp|METK_HALS3|S-ADENOSYLMETHIONINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LQEIFTDE 8
LQ++FTD+
Sbjct: 148 LQDVFTDD 155


>sp|GUAAB_METAR|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocella arvoryzae

Query: 1 LQEIFTDEAR 10
LQ+++ DE R
Sbjct: 160 LQDLYKDEVR 169


>sp|RL18_PICTO|LARGE ribosomal subunit protein uL18|Picrophilus torridus (strain ATCC

Query: 2 QEIFTDEAR 10
++IF DE+R
Sbjct: 129 EDIFPDESR 137


>sp|PUR2_METAC|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 EIFTDEA 9
E+FT+EA
Sbjct: 127 EVFTEEA 133


>sp|PUR2_METMA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 EIFTDEA 9
E+FT+EA
Sbjct: 127 EVFTEEA 133




125|Sequence|621|630|TDEARTGQEN

>sp|IF2P_NATPD|PROBABLE translation initiation factor IF-2|Natronomonas pharaonis (strain

Query: 2 DEARTGQE 9
DEARTG++
Sbjct: 531 DEARTGEQ 538


>sp|AATB2_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain

Query: 3 EARTGQ 8
EARTGQ
Sbjct: 44 EARTGQ 49




126|Sequence|626|635|TGQENNLGGE

>sp|RS8_METBU|SMALL ribosomal subunit protein uS8|Methanococcoides burtonii (strain DSM

Query: 2 GQENNLGGE 10
+ENN+GG+
Sbjct: 116 ARENNVGGQ 124


>sp|SPT5_METJA|TRANSCRIPTION elongation factor Spt5|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GQENNLGG 9
GQE N+ G
Sbjct: 10 GQEKNIAG 17


>sp|PURL_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloquadratum walsbyi (strain DSM 16790

Query: 3 QENNLGG 9
Q NNLGG
Sbjct: 573 QSNNLGG 579




127|Sequence|631|640|NLGGEKNGYV

>sp|RL3_METMP|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain DSM

Query: 1 NLGGEKNGYV 10
N G KNGYV
Sbjct: 282 NYGAVKNGYV 291


>sp|RL3_METM7|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain C7

Query: 1 NLGGEKNGYV 10
N G KNGYV
Sbjct: 282 NYGAVKNGYV 291


>sp|RL3_METM6|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain C6

Query: 1 NLGGEKNGYV 10
N G KNGYV
Sbjct: 282 NYGAVKNGYV 291


>sp|AATF_METTH|A-TYPE ATP synthase subunit F|Methanothermobacter thermautotrophicus

Query: 2 LGGEKNGYV 10
LGG + GYV
Sbjct: 19 LGGVREGYV 27


>sp|RL3_METM5|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain C5

Query: 1 NLGGEKNGYV 10
N G KNGYV
Sbjct: 282 NYGAVKNGYV 291


>sp|SYFB_AERPE|PHENYLALANINE--TRNA ligase beta subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 LGGEKNGYV 10
+GGE+ GY+
Sbjct: 506 VGGERLGYI 514


>sp|Y1353_ARCFU|UNCHARACTERIZED protein AF_1353|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NLGGEKNGY 9
NL GEK GY
Sbjct: 233 NLVGEKEGY 241


>sp|RL3_METVS|LARGE ribosomal subunit protein uL3|Methanococcus vannielii (strain ATCC

Query: 1 NLGGEKNGYV 10
N G KNGYV
Sbjct: 282 NYGAVKNGYV 291


>sp|RL3_METVA|LARGE ribosomal subunit protein uL3|Methanococcus vannielii

Query: 1 NLGGEKNGYV 10
N G KNGYV
Sbjct: 282 NYGAVKNGYV 291


>sp|RIFK_THEAC|RIBOFLAVIN kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 EKNGYV 10
EKNGY+
Sbjct: 50 EKNGYI 55


>sp|MUTS2_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 2 LGGEKNGYV 10
LGG N YV
Sbjct: 132 LGGADNNYV 140


>sp|GLYA_PICTO|SERINE hydroxymethyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 NLGGEKNGYV 10
N+ GEKNG+
Sbjct: 308 NVLGEKNGFT 317


>sp|Y949_SULTO|UPF0201 protein STK_09490|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NLGGEKNGY 9
NL EK+GY
Sbjct: 31 NLKEEKSGY 39


>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 5 EKNGYV 10
+KNGYV
Sbjct: 123 QKNGYV 128


>sp|GATC_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Methanococcoides burtonii (strain DSM

Query: 1 NLGGEKNGYV 10
N EK+GY+
Sbjct: 78 NTAEEKDGYI 87


>sp|AATA3_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain

Query: 4 GEKNGYV 10
GEKNG +
Sbjct: 2 GEKNGVI 8


>sp|RS5_METLZ|SMALL ribosomal subunit protein uS5|Methanocorpusculum labreanum

Query: 4 GEKNGYV 10
G KNGYV
Sbjct: 78 GNKNGYV 84


>sp|RS5_METM5|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain

Query: 4 GEKNGYV 10
G KNGYV
Sbjct: 90 GNKNGYV 96


>sp|RS5_METS3|SMALL ribosomal subunit protein uS5|Methanobrevibacter smithii (strain

Query: 4 GEKNGYV 10
G KNGYV
Sbjct: 78 GNKNGYV 84


>sp|RS5_METMP|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain

Query: 4 GEKNGYV 10
G KNGYV
Sbjct: 86 GNKNGYV 92




128|Sequence|636|645|KNGYVTCPFR

>sp|RIBL_METIM|FAD synthase|Methanocaldococcus infernus (strain DSM 11812

Query: 2 NGYVTCPF 9
N Y+ CPF
Sbjct: 120 NKYIKCPF 127


>sp|Y781_SACS2|UPF0148 protein SSO0781|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KNGYVTCP 8
KNG V CP
Sbjct: 38 KNGDVVCP 45


>sp|Y1488_SACI1|UPF0148 protein YN1551_1488|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KNGYVTCP 8
KNG V CP
Sbjct: 38 KNGDVVCP 45


>sp|Y1455_SACI2|UPF0148 protein LS215_1455|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KNGYVTCP 8
KNG V CP
Sbjct: 38 KNGDVVCP 45


>sp|Y1409_SACI3|UPF0148 protein M1627_1409|Saccharolobus islandicus (strain M.16.27)

Query: 1 KNGYVTCP 8
KNG V CP
Sbjct: 38 KNGDVVCP 45


>sp|Y1359_SACI4|UPF0148 protein M1425_1359|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KNGYVTCP 8
KNG V CP
Sbjct: 38 KNGDVVCP 45


>sp|Y1353_SACI7|UPF0148 protein YG5714_1353|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KNGYVTCP 8
KNG V CP
Sbjct: 38 KNGDVVCP 45


>sp|Y1351_SACI6|UPF0148 protein M164_1351|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KNGYVTCP 8
KNG V CP
Sbjct: 38 KNGDVVCP 45


>sp|PUR2_METVS|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 NGYVTCPFR 10
NGY CP +
Sbjct: 347 NGYPICPVK 355


>sp|CHEY_HALS3|CHEMOTAXIS protein CheY|Halobacterium salinarum (strain ATCC 29341

Query: 2 NGYVTCPFR 10
+GY+T PF+
Sbjct: 98 DGYITKPFQ 106


>sp|RIBL_METV3|FAD synthase|Methanococcus voltae (strain ATCC BAA-1334

Query: 4 YVTCPF 9
YV CPF
Sbjct: 147 YVKCPF 152


>sp|RIBL_METMP|FAD synthase|Methanococcus maripaludis (strain DSM 14266

Query: 4 YVTCPF 9
YV CPF
Sbjct: 124 YVKCPF 129


>sp|RIBL_METM6|FAD synthase|Methanococcus maripaludis (strain C6 /

Query: 4 YVTCPF 9
YV CPF
Sbjct: 124 YVKCPF 129


>sp|RIBL_METM5|FAD synthase|Methanococcus maripaludis (strain C5 /

Query: 4 YVTCPF 9
YV CPF
Sbjct: 124 YVKCPF 129


>sp|TFE_AERPE|TRANSCRIPTION factor E|Aeropyrum pernix (strain ATCC 700893

Query: 2 NGYVTCP 8
N Y TCP
Sbjct: 125 NSYYTCP 131


>sp|RIBL_METM7|FAD synthase|Methanococcus maripaludis (strain C7 /

Query: 4 YVTCPF 9
YV CPF
Sbjct: 124 YVRCPF 129


>sp|RIBL_METSF|FAD synthase|Methanocaldococcus sp. (strain FS406-22)

Query: 3 GYVTCPF 9
GY CPF
Sbjct: 124 GYKKCPF 130


>sp|RIBL_METJA|FAD synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GYVTCPF 9
GY CPF
Sbjct: 122 GYKKCPF 128


>sp|RIBL_METFA|FAD synthase|Methanocaldococcus fervens (strain DSM 4213

Query: 3 GYVTCPF 9
GY CPF
Sbjct: 123 GYKKCPF 129


>sp|IF2B_HALSA|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 4 YVTCP 8
YVTCP
Sbjct: 99 YVTCP 103


>sp|IF2B_HALS3|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 4 YVTCP 8
YVTCP
Sbjct: 99 YVTCP 103


>sp|COFC_METMP|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KNGYVTCPFR 10
KN V CP R
Sbjct: 119 KNSIVICPSR 128


>sp|COFC_METM7|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 KNGYVTCPFR 10
KN V CP R
Sbjct: 119 KNSIVICPSR 128


>sp|COFC_METM6|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 KNGYVTCPFR 10
KN V CP R
Sbjct: 119 KNSIVICPSR 128


>sp|IF2B_NATPD|TRANSLATION initiation factor 2 subunit|Natronomonas pharaonis (strain ATCC

Query: 3 GYVTCP 8
GYV CP
Sbjct: 98 GYVICP 103


>sp|RIFK_THEAC|RIBOFLAVIN kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KNGYVT 6
KNGY+T
Sbjct: 51 KNGYIT 56


>sp|AROA_SULTO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KNGYVTCP 8
K G+V CP
Sbjct: 354 KAGHVICP 361


>sp|PCNA_NITMS|DNA polymerase sliding clamp|Nitrosopumilus maritimus (strain SCM1)

Query: 3 GYVTCPF 9
G++TC F
Sbjct: 214 GFITCEF 220


>sp|AROB_SULTO|3-DEHYDROQUINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KNGYVTCPF 9
+ GYV PF
Sbjct: 318 RGGYVMMPF 326


>sp|HIS3_METLZ|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 GYVTCPFR 10
GY +C FR
Sbjct: 96 GYASCFFR 103


>sp|SYP_HALLT|PROLINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 GYVTCPF 9
GYVT P+
Sbjct: 430 GYVTAPW 436


>sp|Y2181_ARCFU|UNCHARACTERIZED protein AF_2181|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 YVTCP 8
Y+TCP
Sbjct: 10 YITCP 14


>sp|XYLF_SULAC|XYLOSE/ARABINOSE-BINDING protein XylF|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 NGYVTCP 8
+GYVT P
Sbjct: 53 SGYVTAP 59


>sp|IF2B_METVS|TRANSLATION initiation factor 2 subunit|Methanococcus vannielii (strain ATCC

Query: 2 NGYVTCP 8
N YV CP
Sbjct: 100 NEYVLCP 106


>sp|IF2B_METMP|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain DSM

Query: 2 NGYVTCP 8
N YV CP
Sbjct: 100 NEYVLCP 106


>sp|IF2B_METM5|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C5 /

Query: 2 NGYVTCP 8
N YV CP
Sbjct: 100 NEYVLCP 106


>sp|IF2B_METM7|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C7 /

Query: 2 NGYVTCP 8
N YV CP
Sbjct: 100 NEYVLCP 106


>sp|IF2B_METM6|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C6 /

Query: 2 NGYVTCP 8
N YV CP
Sbjct: 100 NEYVLCP 106


>sp|Y221_METM6|UPF0305 protein MmarC6_0221|Methanococcus maripaludis (strain C6 /

Query: 1 KNGYVTCPFR 10
KNG CP +
Sbjct: 132 KNGNYYCPIK 141


>sp|IF2B_THEPD|TRANSLATION initiation factor 2 subunit|Thermofilum pendens (strain DSM 2475

Query: 2 NGYVTCP 8
N YV CP
Sbjct: 103 NEYVKCP 109


>sp|SYW_PYRAB|TRYPTOPHAN--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 KNGYVTC 7
KNG +TC
Sbjct: 326 KNGELTC 332


>sp|SYW_PYRHO|TRYPTOPHAN--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KNGYVTC 7
KNG +TC
Sbjct: 326 KNGELTC 332




129|Sequence|641|650|TCPFRPDCPL

>sp|DMRX_METMA|DIHYDROMETHANOPTERIN reductase (acceptor)|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TCPFRPDCP 9
TCP R +CP
Sbjct: 158 TCPPRENCP 166


>sp|ACDD_METMA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina mazei

Query: 3 PFRPDCPL 10
PF PD P+
Sbjct: 139 PFFPDAPM 146


>sp|ACDD2_METTE|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 3 PFRPDCPL 10
PF PD P+
Sbjct: 140 PFFPDAPM 147


>sp|RL4_THEKO|LARGE ribosomal subunit protein uL4|Thermococcus kodakarensis (strain

Query: 1 TCPFRPD 7
+ PFRPD
Sbjct: 23 STPFRPD 29


>sp|GMHB_THEAC|PROBABLE D-glycero-D-manno-heptose-1,7-bisphosphate

Query: 2 CPFRPD 7
CP RPD
Sbjct: 102 CPHRPD 107


>sp|RS6E_ARCFU|SMALL ribosomal subunit protein eS6|Archaeoglobus fulgidus (strain ATCC

Query: 3 PFRPDCP 9
P RPD P
Sbjct: 62 PMRPDLP 68


>sp|TSGDD_HALVD|GLUCOSE import ATP-binding protein TsgD13|Haloferax volcanii (strain ATCC

Query: 3 PFRPD 7
PFRPD
Sbjct: 112 PFRPD 116


>sp|RL4_THESM|LARGE ribosomal subunit protein uL4|Thermococcus sibiricus (strain DSM

Query: 3 PFRPD 7
PFRPD
Sbjct: 25 PFRPD 29


>sp|RL4_THEON|LARGE ribosomal subunit protein uL4|Thermococcus onnurineus (strain

Query: 3 PFRPD 7
PFRPD
Sbjct: 25 PFRPD 29


>sp|RL4_PYRHO|LARGE ribosomal subunit protein uL4|Pyrococcus horikoshii (strain ATCC

Query: 3 PFRPD 7
PFRPD
Sbjct: 25 PFRPD 29


>sp|RL4_PYRAB|LARGE ribosomal subunit protein uL4|Pyrococcus abyssi (strain GE5 /

Query: 3 PFRPD 7
PFRPD
Sbjct: 25 PFRPD 29


>sp|RL4_PYRFU|LARGE ribosomal subunit protein uL4|Pyrococcus furiosus (strain ATCC

Query: 3 PFRPD 7
PFRPD
Sbjct: 25 PFRPD 29


>sp|MPNS_NITMS|METHYLPHOSPHONATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 TCPFRPD 7
T PFRP+
Sbjct: 118 TAPFRPE 124


>sp|RL4_THEGJ|LARGE ribosomal subunit protein uL4|Thermococcus gammatolerans (strain

Query: 1 TCPFRPD 7
+ PFRPD
Sbjct: 23 STPFRPD 29


>sp|Y989_METMA|UPF0251 protein MM_0989|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CPFRPDCP 9
C RP CP
Sbjct: 4 CRGRPKCP 11


>sp|Y4245_METAC|UPF0251 protein MA_4245|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 CPFRPDCP 9
C RP CP
Sbjct: 4 CRGRPKCP 11


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain

Query: 1 TCPFRPDCP 9
TCP + CP
Sbjct: 10 TCPSKNTCP 18


>sp|SYFA_METLZ|PHENYLALANINE--TRNA ligase alpha subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 TCPFRPDCPL 10
T P+ DCP+
Sbjct: 426 TAPWGIDCPV 435


>sp|RS17_METTH|SMALL ribosomal subunit protein uS17|Methanothermobacter

Query: 2 CPFRPDCPL 10
CPF D PL
Sbjct: 18 CPFHGDLPL 26


>sp|UBAA_HALVD|SAMP-ACTIVATING enzyme E1|Haloferax volcanii (strain ATCC 29605

Query: 1 TCPFR--PDCPL 10
T P+R PDCP+
Sbjct: 236 TVPYRTNPDCPV 247


>sp|COFG_METTH|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 CPFRPDCP 9
C FR D P
Sbjct: 22 CTFRSDTP 29




130|Sequence|646|655|PDCPLGKSFE

>sp|FTSZ2_HALVD|CELL division protein FtsZ 2|Haloferax volcanii (strain ATCC 29605

Query: 1 PDCPLGKSF 9
P+ P+GK+F
Sbjct: 193 PNLPIGKAF 201


>sp|FTSZ2_HALSA|CELL division protein FtsZ 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 PDCPLGKSF 9
P+ P+GK+F
Sbjct: 192 PNLPIGKAF 200


>sp|FTSZ2_HALS3|CELL division protein FtsZ 2|Halobacterium salinarum (strain ATCC 29341

Query: 1 PDCPLGKSF 9
P+ P+GK+F
Sbjct: 192 PNLPIGKAF 200


>sp|Y1640_METAR|UPF0597 protein UNCMA_16400|Methanocella arvoryzae (strain DSM 22066

Query: 3 CPLGKSF 9
CPLGK+
Sbjct: 215 CPLGKAL 221


>sp|Y1940_AERPE|UNCHARACTERIZED protein APE_1940.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 PDCPLGK 7
PD PLG+
Sbjct: 132 PDSPLGR 138


>sp|KDGK1_HALVD|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE volcanii (strain ATCC 29605

Query: 1 PDCPLGK 7
PD PLG+
Sbjct: 57 PDSPLGR 63


>sp|TRPB2_SULTO|TRYPTOPHAN synthase beta chain 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PLGKSFE 10
P GKSFE
Sbjct: 35 PTGKSFE 41


>sp|NDRZ_THEAC|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Thermoplasma

Query: 1 PDCPLGK 7
P CP GK
Sbjct: 759 PACPTGK 765


>sp|KDGK2_HALVD|2-DEHYDRO-3-DEOXYGALACTONOKINASE volcanii (strain ATCC 29605

Query: 1 PDCPLGK 7
PD PLG+
Sbjct: 58 PDSPLGR 64


>sp|FTSZ_METTH|CELL division protein FtsZ|Methanothermobacter thermautotrophicus

Query: 1 PDCPLGKSF 9
P+ PL K+F
Sbjct: 201 PNLPLNKAF 209


>sp|EF2_SULAC|ELONGATION factor 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DCPLGKSFE 10
+ P+G+SFE
Sbjct: 674 EIPVGESFE 682


>sp|CYAS_METMJ|CYSTEATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 DCPLG 6
DCPLG
Sbjct: 23 DCPLG 27


>sp|AROD_THEVO|3-DEHYDROQUINATE dehydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 PLGKSF 9
P+GKSF
Sbjct: 183 PMGKSF 188


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 PDCPLGK 7
P CP GK
Sbjct: 44 PKCPYGK 50


>sp|PUR2_METS3|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PDCPLGK 7
P+ PLGK
Sbjct: 69 PEAPLGK 75


>sp|CBIA_METBF|COBYRINATE a,c-diamide synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 DCPLGKSF 9
DC LGK +
Sbjct: 410 DCLLGKKY 417


>sp|ACDG_METKA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanopyrus kandleri

Query: 2 DCPLG 6
DCPLG
Sbjct: 202 DCPLG 206




131|Sequence|651|660|GKSFEELPVS

>sp|Y009_METJA|UNCHARACTERIZED protein MJ0009|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KSFEELPVS 10
+SF+ELP+S
Sbjct: 15 ESFKELPLS 23


>sp|PURA_METBF|ADENYLOSUCCINATE synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 2 KSFEELP 8
K+FEELP
Sbjct: 384 KAFEELP 390


>sp|Y1547_METJA|PUTATIVE protein adenylyltransferase MJ1547|Methanocaldococcus jannaschii

Query: 2 KSFEELPV 9
K FEELP+
Sbjct: 50 KIFEELPL 57


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 SFEELP 8
SFEELP
Sbjct: 529 SFEELP 534


>sp|PRIL_ARCFU|DNA primase large subunit PriL|Archaeoglobus fulgidus (strain ATCC

Query: 2 KSFEELPVS 10
K FE++PVS
Sbjct: 224 KLFEKVPVS 232


>sp|RUBR_PYRFU|RUBREDOXIN furiosus (strain ATCC 43587

Query: 1 GKSFEELP 8
G FEELP
Sbjct: 27 GTKFEELP 34


>sp|MVK_THESM|MEVALONATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 3 SFEELPV 9
SFE LPV
Sbjct: 176 SFESLPV 182




132|Sequence|656|665|ELPVSPEIPP

>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ELPVSPEIPP 10
E+P+S +PP
Sbjct: 336 EVPISETLPP 345


>sp|T2M1_METJA|TYPE II restriction enzyme MjaI|Methanocaldococcus jannaschii (strain

Query: 1 ELPVSPEIP 9
ELP PE+P
Sbjct: 27 ELPSKPELP 35


>sp|RL18_METAC|LARGE ribosomal subunit protein uL18|Methanosarcina acetivorans (strain

Query: 1 ELPVSPEIPP 10
E+P SPE+ P
Sbjct: 129 EIPCSPEVFP 138


>sp|RL18_METBF|LARGE ribosomal subunit protein uL18|Methanosarcina barkeri (strain

Query: 1 ELPVSPEIPP 10
E+P SPE+ P
Sbjct: 129 EVPCSPEVFP 138


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PVSPEIP 9
PV PE+P
Sbjct: 1098 PVEPELP 1104


>sp|NADE_THESM|NH(3)-DEPENDENT NAD(+) synthetase|Thermococcus sibiricus (strain DSM 12597

Query: 1 ELPVSPEI 8
+LP+ PEI
Sbjct: 247 KLPIGPEI 254


>sp|RPO3_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma volcanium (strain ATCC

Query: 2 LPVSPEIP 9
+PV P+IP
Sbjct: 129 VPVDPDIP 136


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ELPVSPEIPP 10
+LPV P + P
Sbjct: 420 DLPVDPRLQP 429


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ELPVSPEI 8
ELPV P I
Sbjct: 420 ELPVDPRI 427


>sp|S1PNA_SULTO|BIFUNCTIONAL sugar-1-phosphate

Query: 6 PEIPP 10
PEIPP
Sbjct: 148 PEIPP 152


>sp|RL22_METMJ|LARGE ribosomal subunit protein uL22|Methanoculleus marisnigri (strain

Query: 1 ELPVSPE 7
ELPVSP+
Sbjct: 22 ELPVSPK 28


>sp|RS19_SULAC|SMALL ribosomal subunit protein uS19|Sulfolobus acidocaldarius (strain

Query: 4 VSPEIPP 10
+SPEIPP
Sbjct: 1 MSPEIPP 7


>sp|Y952_ARCFU|UNCHARACTERIZED protein AF_0952|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELPVSPE 7
E+PV+PE
Sbjct: 97 EIPVNPE 103


>sp|SYR_AERPE|ARGININE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ELPVSPEIPP 10
+LP S EIPP
Sbjct: 361 KLPRSLEIPP 370


>sp|RL22_METTP|LARGE ribosomal subunit protein uL22|Methanothrix thermoacetophila

Query: 1 ELPVSPE 7
ELP+SP+
Sbjct: 21 ELPISPK 27




133|Sequence|661|670|PEIPPRKSQY

>sp|PUR5_METVS|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PEIPP 5
PEIPP
Sbjct: 263 PEIPP 267


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PEIPPRKS 8
P++PP KS
Sbjct: 540 PKVPPSKS 547


>sp|MTTC_METBA|TRIMETHYLAMINE corrinoid protein|Methanosarcina barkeri

Query: 1 PEIPPRKSQ 9
PE+ RKSQ
Sbjct: 82 PEMEKRKSQ 90


>sp|MTTC2_METMA|TRIMETHYLAMINE corrinoid protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PEIPPRKSQ 9
PE+ RKSQ
Sbjct: 82 PEMEKRKSQ 90


>sp|MTTC1_METMA|TRIMETHYLAMINE corrinoid protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PEIPPRKSQ 9
PE+ RKSQ
Sbjct: 82 PEMEKRKSQ 90


>sp|S1PNA_SULTO|BIFUNCTIONAL sugar-1-phosphate

Query: 1 PEIPP 5
PEIPP
Sbjct: 148 PEIPP 152


>sp|Y2062_SULTO|MEMO1 family protein STK_20620|Sulfurisphaera tokodaii (strain DSM

Query: 1 PEIPPRKSQ 9
P++PP+KS+
Sbjct: 37 PQVPPQKSK 45


>sp|PRIL_METMA|DNA primase large subunit PriL|Methanosarcina mazei (strain ATCC

Query: 1 PEIPPRKSQY 10
PEIPP S +
Sbjct: 186 PEIPPEVSSF 195


>sp|SYFB_ARCFU|PHENYLALANINE--TRNA ligase beta subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PEIPP 5
PEIPP
Sbjct: 344 PEIPP 348


>sp|PRIL_METAC|DNA primase large subunit PriL|Methanosarcina acetivorans (strain ATCC

Query: 1 PEIPPRKSQY 10
PEIPP S +
Sbjct: 186 PEIPPEVSAF 195


>sp|AROC_METTP|CHORISMATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PEIPPR 6
P IPPR
Sbjct: 342 PSIPPR 347


>sp|MTAP_THEPD|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermofilum pendens (strain DSM 2475

Query: 2 EIPPRKSQY 10
EIPP K Y
Sbjct: 60 EIPPHKVNY 68


>sp|Y1285_METTH|UNCHARACTERIZED HTH-type transcriptional regulator MTH_1285|Methanothermobacter

Query: 1 PEIPPR 6
PE+PPR
Sbjct: 88 PEVPPR 93


>sp|DYRA_HALVD|DIHYDROFOLATE reductase HdrA|Haloferax volcanii (strain ATCC 29605

Query: 1 PEIPPRKSQY 10
P IP K QY
Sbjct: 24 PSIPADKKQY 33




134|Sequence|666|675|RKSQYLRSRM

>sp|RL15E_METLZ|LARGE ribosomal subunit protein eL15|Methanocorpusculum labreanum

Query: 1 RKSQYLRSR 9
RKS+Y+R R
Sbjct: 74 RKSRYIRGR 82


>sp|RL15E_METBU|LARGE ribosomal subunit protein eL15|Methanococcoides burtonii (strain

Query: 1 RKSQYLRSR 9
RKS+Y+R R
Sbjct: 74 RKSRYIRGR 82




135|Sequence|671|680|LRSRMPEGTR

>sp|NFI_HALMA|ENDONUCLEASE V|Haloarcula marismortui (strain ATCC 43049

Query: 1 LRSRMPEGTR 10
L R PEGTR
Sbjct: 180 LDERYPEGTR 189


>sp|DHQS_METLZ|3-DEHYDROQUINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LRSRMPEG 8
L SRMP+G
Sbjct: 257 LLSRMPDG 264


>sp|LEUD2_ARCFU|3-ISOPROPYLMALATE dehydratase small subunit 2|Archaeoglobus fulgidus (strain ATCC

Query: 1 LRSRMPE 7
LRS MPE
Sbjct: 27 LRSNMPE 33


>sp|EF1B_METTH|ELONGATION factor 1-beta|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LRSRMPEGT 9
++ R+PEGT
Sbjct: 26 IQERIPEGT 34


>sp|SYFB_THEAC|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RSRMPEGTR 10
RSR+ EGT+
Sbjct: 210 RSRIDEGTK 218


>sp|GATA_CENSY|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Cenarchaeum symbiosum (strain A)

Query: 2 RSRMPE 7
RSRMPE
Sbjct: 469 RSRMPE 474


>sp|DPCKG_METTH|GTP-DEPENDENT dephospho-CoA kinase|Methanothermobacter thermautotrophicus

Query: 1 LRSRMPEGT 9
LRSR P GT
Sbjct: 76 LRSRNPPGT 84


>sp|ABLB_METMA|BETA-LYSINE N(6)-acetyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RSRMPEG 8
+SR+PEG
Sbjct: 114 KSRLPEG 120


>sp|NFI_NATPD|ENDONUCLEASE V|Natronomonas pharaonis (strain ATCC 35678

Query: 3 SRMPEGTR 10
+ +PEGTR
Sbjct: 159 ASLPEGTR 166


>sp|LIPA_HALLT|LIPOYL synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 LRSRMPEGTR 10
L+SR P G+R
Sbjct: 11 LKSRPPSGSR 20




136|Sequence|676|685|PEGTRPEAKE

>sp|GLPK_THEON|GLYCEROL kinase|Thermococcus onnurineus (strain NA1)

Query: 1 PEGTRPEAKE 10
PEG PE KE
Sbjct: 205 PEGVLPEVKE 214


>sp|PYRE_PYRIL|OROTATE phosphoribosyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 5 RPEAKE 10
RPEAKE
Sbjct: 85 RPEAKE 90


>sp|GLPK_PYRAB|GLYCEROL kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 PEGTRPEAKE 10
PEG PE +E
Sbjct: 205 PEGILPEVRE 214


>sp|GLPK_THEGJ|GLYCEROL kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PEGTRPEAKE 10
PEG PE +E
Sbjct: 205 PEGILPEVRE 214


>sp|UVRB_METMA|UVRABC system protein B|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PEGTRPEAKE 10
P+G++PEA E
Sbjct: 38 PKGSQPEAIE 47


>sp|IF6_METBF|TRANSLATION initiation factor 6|Methanosarcina barkeri (strain Fusaro /

Query: 1 PEGTRPE 7
P GT+PE
Sbjct: 27 PTGTKPE 33


>sp|RL40_METJA|LARGE ribosomal subunit protein eL40|Methanocaldococcus jannaschii

Query: 2 EGTRPEAKE 10
+G RP+AKE
Sbjct: 36 KGLRPKAKE 44


>sp|DNAJ_THEVO|CHAPERONE protein DnaJ|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PEGTRP 6
PEGT+P
Sbjct: 303 PEGTQP 308


>sp|RPIA_KORCO|RIBOSE-5-PHOSPHATE isomerase A|Korarchaeum cryptofilum (strain OPF8)

Query: 1 PEGTRPE 7
P+G RPE
Sbjct: 70 PDGERPE 76


>sp|DNAJ_THEAC|CHAPERONE protein DnaJ|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PEGTRP 6
PEGT+P
Sbjct: 303 PEGTQP 308


>sp|Y1965_THEON|PROTEIN TON_1965|Thermococcus onnurineus (strain NA1)

Query: 1 PEGTRPEAKE 10
PEGT PE E
Sbjct: 33 PEGTPPELWE 42


>sp|UVRB_METAC|UVRABC system protein B|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PEGTRPEAKE 10
P+G++P+A E
Sbjct: 38 PKGSQPQAIE 47




137|Sequence|681|690|PEAKEQLLFS

>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 4 KEQLLFS 10
KEQLLFS
Sbjct: 1664 KEQLLFS 1670


>sp|Y2068_ARCFU|DNA-BINDING protein AF_2068|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PEAKEQL 7
PEAKE+L
Sbjct: 50 PEAKERL 56




138|Sequence|686|695|QLLFSGQSLV

>sp|PYCB_METTH|PYRUVATE carboxylase subunit B|Methanothermobacter thermautotrophicus

Query: 1 QLLFSGQSLV 10
Q+L GQ+LV
Sbjct: 79 QMLLRGQNLV 88


>sp|PYCB_METJA|PYRUVATE carboxylase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 1 QLLFSGQSLV 10
Q+L GQ+LV
Sbjct: 77 QMLLRGQNLV 86


>sp|SECY_METTH|PROTEIN translocase subunit SecY|Methanothermobacter thermautotrophicus

Query: 2 LLFSGQS 8
LLF+GQS
Sbjct: 213 LLFTGQS 219




139|Sequence|691|700|GQSLVPDHLC

>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GQSLVPDHL 9
G+ LVP+HL
Sbjct: 592 GKDLVPNHL 600


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GQSLVPDHL 9
G+ LVP+HL
Sbjct: 592 GKDLVPNHL 600


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GQSLVPDHL 9
G+ LVP+HL
Sbjct: 592 GKDLVPNHL 600


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GQSLVPDHL 9
G+ LVP+HL
Sbjct: 579 GKDLVPNHL 587


>sp|CDC64_HALSA|ORC1-TYPE DNA replication protein 4|Halobacterium salinarum (strain ATCC

Query: 1 GQSLVPDHLC 10
G+SLV H+C
Sbjct: 74 GKSLVSKHVC 83


>sp|CDC62_HALSA|ORC1-TYPE DNA replication protein 2|Halobacterium salinarum (strain ATCC

Query: 1 GQSLVPDHLC 10
G+SLV H+C
Sbjct: 74 GKSLVSKHVC 83


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GQSLVPDHL 9
G+ L+P+HL
Sbjct: 598 GKDLIPNHL 606


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GQSLVPDHL 9
G+ L+P+HL
Sbjct: 598 GKDLIPNHL 606


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GQSLVPDHL 9
G+ L+P+HL
Sbjct: 610 GKDLIPNHL 618


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GQSLVPDHL 9
G+ L+P+HL
Sbjct: 598 GKDLIPNHL 606


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GQSLVPDHL 9
G+ L+P+HL
Sbjct: 598 GKDLIPNHL 606


>sp|SYL_PYRAE|LEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GQSLVPDHL 9
G+ L+P+HL
Sbjct: 598 GKDLIPNHL 606


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 GQSLVPDHL 9
G+ L+P+HL
Sbjct: 610 GKDLIPNHL 618


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GQSLVPDHL 9
G+ L+P+HL
Sbjct: 591 GKDLIPNHL 599


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GQSLVPDHL 9
G+ L+P+HL
Sbjct: 597 GKDLIPNHL 605


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GQSLVPDHL 9
G+ L+P+HL
Sbjct: 581 GKDLIPNHL 589


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GQSLVPDHL 9
G+ L+P+HL
Sbjct: 583 GKDLIPNHL 591


>sp|RPO5_NITMS|DNA-DIRECTED RNA polymerase subunit Rpo5|Nitrosopumilus maritimus (strain

Query: 2 QSLVPDHL 9
Q LVPDH+
Sbjct: 7 QILVPDHI 14


>sp|GGR1_METKA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanopyrus kandleri (strain AV19 /

Query: 4 LVPDHLC 10
L PDH+C
Sbjct: 165 LEPDHIC 171


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 GQSLVPDHL 9
G L+P+HL
Sbjct: 591 GPDLIPNHL 599


>sp|SPCS_METKA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanopyrus kandleri (strain AV19 /

Query: 2 QSLVPDHL 9
+ L+PDH+
Sbjct: 2 RGLIPDHM 9


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 2 QSLVPDH 8
Q L PDH
Sbjct: 629 QDLTPDH 635


>sp|DHE3_THELN|GLUTAMATE dehydrogenase|Thermococcus litoralis (strain ATCC 51850

Query: 1 GQSLVPDHLC 10
G ++PD LC
Sbjct: 334 GILIIPDFLC 343


>sp|YE7B_METJA|UNCHARACTERIZED protein MJ1479.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QSLVPDHLC 10
+ L PD LC
Sbjct: 41 EELFPDELC 49




140|Sequence|696|705|PDHLCEEGAP

>sp|SPCS_METKA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanopyrus kandleri (strain AV19 /

Query: 1 PDHLCEEG 8
PDH+ E G
Sbjct: 6 PDHMLERG 13


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 HLCEE 7
HLCEE
Sbjct: 787 HLCEE 791


>sp|Y992_IGNH4|MEMO1 family protein Igni_0992|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 HLCEEGAP 10
HL +EGAP
Sbjct: 71 HLAQEGAP 78


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 HLCEE 7
HLCEE
Sbjct: 801 HLCEE 805


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 HLCEE 7
HLCEE
Sbjct: 790 HLCEE 794


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 HLCEE 7
HLCEE
Sbjct: 790 HLCEE 794


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 HLCEE 7
HLCEE
Sbjct: 790 HLCEE 794


>sp|DHE3_THELN|GLUTAMATE dehydrogenase|Thermococcus litoralis (strain ATCC 51850

Query: 1 PDHLCEEGA 9
PD LC G
Sbjct: 339 PDFLCNAGG 347


>sp|DHE3_PYRHR|GLUTAMATE dehydrogenase|Pyrococcus horikoshii

Query: 1 PDHLCEEGA 9
PD LC G
Sbjct: 340 PDFLCNAGG 348


>sp|DHE3_PYRHO|GLUTAMATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PDHLCEEGA 9
PD LC G
Sbjct: 340 PDFLCNAGG 348


>sp|DHE3_PYRFU|GLUTAMATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PDHLCEEGA 9
PD LC G
Sbjct: 340 PDFLCNAGG 348


>sp|DHE3_PYREN|GLUTAMATE dehydrogenase|Pyrococcus endeavori

Query: 1 PDHLCEEGA 9
PD LC G
Sbjct: 340 PDFLCNAGG 348


>sp|DHE3_PYRAB|GLUTAMATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 PDHLCEEGA 9
PD LC G
Sbjct: 340 PDFLCNAGG 348


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HLCEE 7
HLCEE
Sbjct: 777 HLCEE 781


>sp|DHE3_THEPR|GLUTAMATE dehydrogenase|Thermococcus profundus

Query: 1 PDHLCEEGA 9
PD LC G
Sbjct: 339 PDFLCNAGG 347


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 HLCEE 7
HLCEE
Sbjct: 777 HLCEE 781


>sp|TOP6A_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 PDHLCEEGAP 10
P ++C +G P
Sbjct: 232 PVYICNDGDP 241


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 HLCEE 7
HLCEE
Sbjct: 777 HLCEE 781


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 HLCEE 7
HLCEE
Sbjct: 777 HLCEE 781


>sp|DHE3_THEKO|GLUTAMATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PDHLCEEGA 9
PD LC G
Sbjct: 341 PDFLCNAGG 349


>sp|SYY_THEKO|TYROSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 HLCEEGAP 10
HL E GAP
Sbjct: 26 HLLEVGAP 33


>sp|HELS_NATPD|ATP-DEPENDENT DNA helicase Hel308|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DHLCEEG 8
DHL EEG
Sbjct: 15 DHLREEG 21


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 PDHLC 5
P+HLC
Sbjct: 723 PEHLC 727


>sp|RF1_HALVD|PEPTIDE chain release factor subunit|Haloferax volcanii (strain ATCC 29605

Query: 1 PDHLCEEGA 9
P H C++G+
Sbjct: 351 PTHECDDGS 359


>sp|SYY_THEON|TYROSINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 HLCEEGAP 10
HL E GAP
Sbjct: 26 HLLEIGAP 33


>sp|GLMM_METBU|PROBABLE phosphoglucosamine mutase|Methanococcoides burtonii (strain DSM

Query: 3 HLCEEGA 9
H C+EGA
Sbjct: 257 HECDEGA 263


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 2 DHLCEEGA 9
D +CE GA
Sbjct: 309 DEICERGA 316


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 PDHLC 5
P+HLC
Sbjct: 714 PEHLC 718


>sp|YE7B_METJA|UNCHARACTERIZED protein MJ1479.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PDHLCE 6
PD LCE
Sbjct: 45 PDELCE 50


>sp|SYFB_METKA|PHENYLALANINE--TRNA ligase beta subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 HLCEEGAP 10
HL +GAP
Sbjct: 194 HLVSDGAP 201




141|Sequence|701|710|EEGAPNPYLK

>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 1 EEGAPNPYLK 10
+EG P+PY K
Sbjct: 286 KEGTPSPYSK 295


>sp|TRM1_META3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus aeolicus

Query: 3 GAPNPYL 9
GAP+PYL
Sbjct: 137 GAPSPYL 143


>sp|Y181_METJA|UNCHARACTERIZED protein MJ0181|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEGAPNPY 8
EE PNPY
Sbjct: 226 EENYPNPY 233


>sp|TRM1_METBU|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcoides burtonii

Query: 3 GAPNPYL 9
G+P PYL
Sbjct: 141 GSPTPYL 147


>sp|FSX1_NATA2|FUSEXIN 1|Natrinema altunense (strain JCM 12890

Query: 2 EGAPNPY 8
EG P PY
Sbjct: 247 EGVPEPY 253


>sp|CDPAS_METKA|CDP-ARCHAEOL synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 EEGAPNPYL 9
E GAP P L
Sbjct: 111 ERGAPAPVL 119


>sp|NIFE_METTH|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 1 EEGAPNPYLK 10
+ G PN YL+
Sbjct: 369 QNGLPNDYLR 378


>sp|AROB_PYRCJ|3-DEHYDROQUINATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EEGAPNP 7
EEG P+P
Sbjct: 35 EEGLPSP 41


>sp|P845_THEAC|PHOSPHATASE Ta0845|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 PNPYLK 10
P PYLK
Sbjct: 134 PEPYLK 139


>sp|TRM1_METMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina mazei (strain

Query: 3 GAPNPYL 9
G P+PYL
Sbjct: 141 GTPSPYL 147


>sp|TKSU_THEKO|TK-SUBTILISIN kodakarensis (strain ATCC BAA-918

Query: 2 EGAPNP 7
EGAP+P
Sbjct: 289 EGAPSP 294


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 1 EEGAPNPY 8
EEG+ NP+
Sbjct: 352 EEGSRNPF 359


>sp|ALBA1_AERPE|DNA/RNA-BINDING protein Alba 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 EEGAPNPYLK 10
EEGAP +K
Sbjct: 31 EEGAPEVVIK 40


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 GAPNPYLK 10
GAP YLK
Sbjct: 456 GAPRRYLK 463


>sp|CDPAS_HYPBU|CDP-ARCHAEOL synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 EEGAPNPYL 9
E GAP P L
Sbjct: 107 ERGAPAPLL 115


>sp|TRM1_METS5|TRNA (guanine(26)-N(2))-dimethyltransferase|Metallosphaera sedula

Query: 3 GAPNPYL 9
G+P PYL
Sbjct: 132 GSPAPYL 138


>sp|ACDB2_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 1 EEGAPNPY 8
EEG+ NP+
Sbjct: 59 EEGSRNPF 66


>sp|Y998_META3|DNA-BINDING protein Maeo_0998|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 EGAPNP 7
+GAPNP
Sbjct: 20 QGAPNP 25


>sp|SYE_META3|GLUTAMATE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 EGAPNP 7
+GAPNP
Sbjct: 20 KGAPNP 25


>sp|DPCKG_PYRAB|GTP-DEPENDENT dephospho-CoA kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 EEGAPNPYLK 10
E P PYLK
Sbjct: 24 EGDIPTPYLK 33




142|Sequence|706|715|NPYLKNSVTA

>sp|DCDB_METPE|DCTP deaminase, dUMP-forming|Methanosphaerula palustris (strain ATCC

Query: 1 NPYLKNSVTA 10
+PY K SVTA
Sbjct: 51 DPYDKESVTA 60


>sp|Y1514_METJA|PUTATIVE gamma-glutamylcyclotransferase MJ1514|Methanocaldococcus

Query: 2 PYLKNS 7
PYLKNS
Sbjct: 19 PYLKNS 24


>sp|RL3_PICTO|LARGE ribosomal subunit protein uL3|Picrophilus torridus (strain ATCC

Query: 3 YLKNSVTA 10
Y KNSVTA
Sbjct: 57 YRKNSVTA 64


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 NPYLKNSVT 9
+PYL NS+T
Sbjct: 6070 DPYLANSLT 6078


>sp|GPMA_METB6|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanoregula boonei (strain DSM 21154

Query: 2 PYLKNSV 8
PY KNS+
Sbjct: 161 PYWKNSI 167


>sp|Y3504_METJA|UNCHARACTERIZED protein MJECL04|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PYLKNSV 8
PYLKN +
Sbjct: 260 PYLKNLI 266




143|Sequence|711|720|NSVTAREFLV

>sp|PRIS_METST|DNA primase small subunit PriS|Methanosphaera stadtmanae (strain ATCC

Query: 1 NSVTAREF 8
NS+T+REF
Sbjct: 32 NSLTSREF 39


>sp|OGG1_METJA|8-OXOGUANINE DNA glycosylase/AP lyase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NSVTAREFLV 10
N AREFLV
Sbjct: 111 NEKVAREFLV 120




144|Sequence|716|725|REFLVSEKLP

>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 REFLVSEKLP 10
RE VSEK+P
Sbjct: 380 RELRVSEKVP 389


>sp|PGK_METMA|PHOSPHOGLYCERATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EFLVSEKLP 10
+FL EKLP
Sbjct: 390 DFLAGEKLP 398


>sp|PGK_METLZ|PHOSPHOGLYCERATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 EFLVSEKLP 10
EFL +KLP
Sbjct: 383 EFLTGKKLP 391


>sp|PGK_METJA|PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EFLVSEKLP 10
+FL EKLP
Sbjct: 394 DFLAGEKLP 402


>sp|PGK_METMP|PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 EFLVSEKLP 10
EFL +KLP
Sbjct: 392 EFLAGKKLP 400


>sp|AATI_SACS2|A-TYPE ATP synthase subunit I|Saccharolobus solfataricus (strain ATCC

Query: 2 EFLVSEKLP 10
EFL EKLP
Sbjct: 497 EFLFLEKLP 505


>sp|PRIS_SACI6|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 REFLVSEKLP 10
R++LV+ LP
Sbjct: 61 RDYLVNRNLP 70


>sp|PRIS_SACI4|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 REFLVSEKLP 10
R++LV+ LP
Sbjct: 61 RDYLVNRNLP 70


>sp|PRIS_SACI3|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 REFLVSEKLP 10
R++LV+ LP
Sbjct: 61 RDYLVNRNLP 70


>sp|PRIS_SACI7|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 REFLVSEKLP 10
R++LV+ LP
Sbjct: 61 RDYLVNRNLP 70


>sp|PRIS_SACI2|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 REFLVSEKLP 10
R++LV+ LP
Sbjct: 61 RDYLVNRNLP 70


>sp|PRIS_SACI1|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 REFLVSEKLP 10
R++LV+ LP
Sbjct: 61 RDYLVNRNLP 70


>sp|PRIS_SACS2|DNA primase small subunit PriS|Saccharolobus solfataricus (strain

Query: 1 REFLVSEKLP 10
R++LV+ LP
Sbjct: 61 RDYLVNRNLP 70


>sp|RRP4_IGNAA|EXOSOME complex component Rrp4|Ignisphaera aggregans (strain DSM 17230

Query: 1 REFLVSEKL 9
REF++ EK+
Sbjct: 236 REFIIEEKV 244


>sp|COFG_ARCFU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EFLVSEKLP 10
EF++ E+LP
Sbjct: 285 EFILKERLP 293




145|Sequence|721|732|SEKLPEHTKGEV

>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EKLPEHT 8
EK PEHT
Sbjct: 223 EKFPEHT 229


>sp|TRMJ_METJA|TRNA (cytidine-2'-O-)-methyltransferase TrmJ|Methanocaldococcus

Query: 1 SEKLPEHTK 9
+EK+PEH K
Sbjct: 193 NEKIPEHKK 201


>sp|RS7_PYRIL|SMALL ribosomal subunit protein uS7|Pyrobaculum islandicum (strain DSM

Query: 2 EKLPEHTKGE 11
E+LP+HTK E
Sbjct: 8 EQLPKHTKIE 17


>sp|SODF_AERPE|SUPEROXIDE dismutase [Mn/Fe]|Aeropyrum pernix (strain ATCC 700893

Query: 2 EKLPEHTKGEV 12
EK+ +H KGE+
Sbjct: 48 EKIEKHLKGEI 58


>sp|NADE_STAMF|NH(3)-DEPENDENT NAD(+) synthetase|Staphylothermus marinus (strain ATCC 43588

Query: 2 EKLPEHT 8
EK+PEHT
Sbjct: 230 EKVPEHT 236


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 SEKLPEHTKGE 11
+E++P+H +GE
Sbjct: 297 AEEVPDHAQGE 307


>sp|Y1371_METJA|UNCHARACTERIZED methyltransferase MJ1371|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SEKLPEHTKGEV 12
+E++ EH KG V
Sbjct: 152 AEEIVEHFKGNV 163


>sp|Y1560_METJA|UNCHARACTERIZED MFS-type transporter MJ1560|Methanocaldococcus jannaschii (strain

Query: 2 EKLPEHTKGE 11
+ +P H KGE
Sbjct: 324 KDIPTHRKGE 333


>sp|PYRI_CALMQ|ASPARTATE carbamoyltransferase regulatory chain|Caldivirga maquilingensis

Query: 3 KLPEHTKGEV 12
KLPE KG V
Sbjct: 102 KLPETVKGVV 111


>sp|RL18_METJA|LARGE ribosomal subunit protein uL18|Methanocaldococcus jannaschii

Query: 2 EKLPEH 7
EKLPEH
Sbjct: 178 EKLPEH 183


>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SEKLPEHTKGE 11
+EKL E+ KGE
Sbjct: 435 AEKLLEYIKGE 445


>sp|RL18_THEGJ|LARGE ribosomal subunit protein uL18|Thermococcus gammatolerans (strain

Query: 2 EKLPEH 7
EKLPEH
Sbjct: 179 EKLPEH 184


>sp|RL18_THEON|LARGE ribosomal subunit protein uL18|Thermococcus onnurineus (strain NA1)

Query: 2 EKLPEH 7
EKLPEH
Sbjct: 179 EKLPEH 184


>sp|RL18_THEKO|LARGE ribosomal subunit protein uL18|Thermococcus kodakarensis (strain

Query: 2 EKLPEH 7
EKLPEH
Sbjct: 179 EKLPEH 184


>sp|RL18_PYRHO|LARGE ribosomal subunit protein uL18|Pyrococcus horikoshii (strain ATCC

Query: 2 EKLPEH 7
EKLPEH
Sbjct: 179 EKLPEH 184


>sp|RL18_PYRFU|LARGE ribosomal subunit protein uL18|Pyrococcus furiosus (strain ATCC

Query: 2 EKLPEH 7
EKLPEH
Sbjct: 179 EKLPEH 184


>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 6 EHTKGEV 12
+HT+GEV
Sbjct: 98 DHTRGEV 104


>sp|RL18_THESM|LARGE ribosomal subunit protein uL18|Thermococcus sibiricus (strain DSM

Query: 2 EKLPEH 7
EKLPEH
Sbjct: 178 EKLPEH 183


>sp|RL18_PYRAB|LARGE ribosomal subunit protein uL18|Pyrococcus abyssi (strain GE5 /

Query: 2 EKLPEH 7
EKLPEH
Sbjct: 179 EKLPEH 184


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 SEKLPEHTKG 10
S+ +PE+ KG
Sbjct: 206 SQDMPENVKG 215


>sp|IF1A_ARCFU|TRANSLATION initiation factor 1A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KLPEHTKGEV 12
+LP+ KGE+
Sbjct: 11 RLPDRKKGEL 20


>sp|AMZA_METKA|ARCHAEMETZINCIN kandleri (strain AV19 /

Query: 3 KLPEHTKGEV 12
KLPEH +V
Sbjct: 41 KLPEHAYSKV 50


>sp|NADK_THEGJ|NAD kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 EKLPEHTKGEV 12
E LPE +G+V
Sbjct: 40 ENLPEFEEGDV 50


>sp|IDI2_IGNH4|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 PEHTKGE 11
PEH KG+
Sbjct: 330 PEHIKGK 336


>sp|RL29_PYRFU|LARGE ribosomal subunit protein uL29|Pyrococcus furiosus (strain ATCC

Query: 2 EKLPEHTKGEV 12
EKL E KG+V
Sbjct: 60 EKLREREKGKV 70


>sp|RL10_THESM|LARGE ribosomal subunit protein uL10|Thermococcus sibiricus (strain DSM

Query: 2 EKLPEHTKG 10
EKL EH +G
Sbjct: 76 EKLIEHIQG 84






THE END