BGH3_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|LALLRVFLAM

***** No hits found ******


2|SequenceR|15|6|ALALALALLR

***** No hits found ******


3|SequenceR|20|11|AAPGLALALA

>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 1 AAPGLALALA 10
AAPGL ALA
Sbjct: 859 AAPGLEEALA 868


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 1 AAPGLALALA 10
AAPGL ALA
Sbjct: 759 AAPGLEEALA 768


>sp|IF2P_PYRFU|PROBABLE translation initiation factor IF-2|Pyrococcus furiosus (strain ATCC

Query: 1 AAPGLALALA 10
AAPGL ALA
Sbjct: 699 AAPGLEEALA 708


>sp|IF2P_PYRAB|PROBABLE translation initiation factor IF-2|Pyrococcus abyssi (strain GE5 /

Query: 1 AAPGLALALA 10
AAPGL ALA
Sbjct: 707 AAPGLEEALA 716


>sp|IF2P_THEON|PROBABLE translation initiation factor IF-2|Thermococcus onnurineus (strain

Query: 1 AAPGLALALA 10
AAPGL ALA
Sbjct: 312 AAPGLEEALA 321


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 1 AAPGLALALA 10
+APGL ALA
Sbjct: 315 SAPGLEEALA 324


>sp|COXX_PYRNV|PROTOHEME IX farnesyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 PGLALALA 10
PGLAL LA
Sbjct: 229 PGLALVLA 236




4|SequenceR|25|16|PGALTAAPGL

>sp|Y1804_AERPE|UNCHARACTERIZED protein APE_1804|Aeropyrum pernix (strain ATCC 700893

Query: 1 PGALTAAPG 9
PG T APG
Sbjct: 12 PGPPTEAPG 20


>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 2 GALTAAPGL 10
GA+ APG+
Sbjct: 266 GAMLTAPGI 274


>sp|GLYA_THEVO|SERINE hydroxymethyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PGALTAAPGL 10
PG L A P L
Sbjct: 106 PGDLVAVPAL 115


>sp|GLYA_THEAC|SERINE hydroxymethyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 PGALTAAPGL 10
PG L A P L
Sbjct: 106 PGDLVATPSL 115


>sp|AGL6_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl6|Haloferax volcanii

Query: 1 PGALTAAPGL 10
PG L +APG
Sbjct: 267 PGYLFSAPGF 276


>sp|IORB_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorB|Pyrococcus horikoshii (strain ATCC

Query: 2 GALTAAPGL 10
GALT PG
Sbjct: 154 GALTQTPGF 162


>sp|COFC_METTP|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PGALTAAPG 9
PG + APG
Sbjct: 119 PGGVVLAPG 127




5|SequenceR|30|21|YPSKAPGALT

>sp|MDH_SACS2|MALATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PSKAPGAL 9
P K PGAL
Sbjct: 107 PPKNPGAL 114


>sp|RL30_STAMF|LARGE ribosomal subunit protein uL30|Staphylothermus marinus (strain

Query: 1 YPSKAPG 7
YPS PG
Sbjct: 38 YPSNQPG 44


>sp|CARA_SACS2|CARBAMOYL phosphate synthase small chain|Saccharolobus solfataricus (strain

Query: 1 YPSKAPGALT 10
YPSK ALT
Sbjct: 98 YPSKWNSALT 107


>sp|SYW2_HALSA|TRYPTOPHAN--TRNA ligase 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 YPSKAPGAL 9
YP PGAL
Sbjct: 228 YPVGKPGAL 236


>sp|Y706_METBF|UPF0288 protein Mbar_A0706|Methanosarcina barkeri (strain Fusaro /

Query: 1 YPSKAPGAL 9
YP KAP ++
Sbjct: 392 YPEKAPKSV 400




6|SequenceR|35|26|QLVLQYPSKA

>sp|RPO2C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 1 QLVLQYPSKA 10
Q +L YP KA
Sbjct: 179 QHLLHYPQKA 188


>sp|RPO2C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 1 QLVLQYPSKA 10
Q +L YP KA
Sbjct: 179 QHLLHYPQKA 188


>sp|Y1521_ARCFU|ADP-RIBOSE glycohydrolase AF_1521|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VLQYPSKA 10
+ QYP+KA
Sbjct: 21 ITQYPAKA 28


>sp|HUTH_THEVO|PROBABLE histidine ammonia-lyase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 VLQYPSKA 10
VL YPS A
Sbjct: 392 VLSYPSSA 399




7|SequenceR|40|31|RLRSHQLVLQ

>sp|THYX_SULAC|FLAVIN-DEPENDENT thymidylate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RLRSHQLV 8
R+ SHQLV
Sbjct: 71 RVASHQLV 78


>sp|THYX_SACS2|FLAVIN-DEPENDENT thymidylate synthase|Saccharolobus solfataricus (strain ATCC

Query: 1 RLRSHQLV 8
R+ SHQLV
Sbjct: 72 RVASHQLV 79




8|SequenceR|45|36|GHQRGRLRSH

>sp|PYRH_THEGJ|URIDYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 QRGRLRSH 10
QRGR+R++
Sbjct: 193 QRGRIRTY 200


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 GHQRGRLRS 9
G RGRLRS
Sbjct: 8755 GWLRGRLRS 8763


>sp|LEUC_METTH|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanothermobacter

Query: 4 RGRLRSH 10
RG+LR H
Sbjct: 165 RGKLREH 171


>sp|F16A2_HALMA|FRUCTOSE-1,6-BISPHOSPHATASE class 1 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 GHQRGRLRSH 10
G+ G+LR H
Sbjct: 217 GYPNGKLRVH 226


>sp|TIAS_HYPBU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Hyperthermus butylicus (strain

Query: 3 QRGRLRSH 10
+ GRLR+H
Sbjct: 329 ETGRLRNH 336




9|SequenceR|50|41|ACVNPGHQRG

>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 VNPGHQRG 10
VNPGH+ G
Sbjct: 529 VNPGHKIG 536


>sp|MOBA_METJA|PROBABLE molybdenum cofactor guanylyltransferase|Methanocaldococcus

Query: 2 CVNPGHQRG 10
C+ P H+ G
Sbjct: 130 CIIPKHENG 138




10|SequenceR|55|46|IVKQVACVNP

>sp|RL32_METVS|LARGE ribosomal subunit protein eL32|Methanococcus vannielii (strain

Query: 2 VKQVACVNP 10
VKQ+A +NP
Sbjct: 83 VKQLAALNP 91


>sp|RL32_METVA|LARGE ribosomal subunit protein eL32|Methanococcus vannielii

Query: 2 VKQVACVNP 10
VKQ+A +NP
Sbjct: 83 VKQLAALNP 91


>sp|THI4_AERPE|THIAMINE thiazole synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 KQVACVNP 10
+Q+ CV+P
Sbjct: 155 RQITCVDP 162




11|SequenceR|60|51|KRNTGIVKQV

>sp|HIS4_METTH|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanothermobacter

Query: 1 KRNTGIVKQV 10
++NTGI+K++
Sbjct: 59 EKNTGILKEI 68


>sp|RL15_METM6|LARGE ribosomal subunit protein uL15|Methanococcus maripaludis (strain

Query: 2 RNTGIVKQV 10
RN G++KQ+
Sbjct: 62 RNPGLIKQL 70


>sp|RL15_METM7|LARGE ribosomal subunit protein uL15|Methanococcus maripaludis (strain

Query: 2 RNTGIVKQV 10
RN G++KQ+
Sbjct: 62 RNPGLIKQL 70


>sp|RS8E_METPE|SMALL ribosomal subunit protein eS8|Methanosphaerula palustris (strain

Query: 2 RNTGIVKQV 10
R+TG+ KQV
Sbjct: 66 RSTGVCKQV 74


>sp|SYS_THEKO|SERINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KRNTGIVKQV 10
KR+ IVKQ+
Sbjct: 76 KRSNEIVKQI 85




12|SequenceR|65|56|CNTFYKRNTG

>sp|Y1942_ARCFU|UNCHARACTERIZED protein AF_1942|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CNTFYKRNTG 10
C +FY +NTG
Sbjct: 41 CYSFYLKNTG 50


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 CNTFYKR 7
CNT Y+R
Sbjct: 1209 CNTSYRR 1215


>sp|SYP_META3|PROLINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 TFYKRNTG 10
T Y+R+TG
Sbjct: 351 TIYRRDTG 358


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 CNTFYKR 7
CNT Y+R
Sbjct: 1608 CNTKYRR 1614


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CNTFYKR 7
CNT Y+R
Sbjct: 1124 CNTKYRR 1130


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CNTFYKR 7
CNT Y+R
Sbjct: 1065 CNTKYRR 1071


>sp|Y1038_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 NTFYKRNT 9
+ FY RNT
Sbjct: 9 SVFYSRNT 16


>sp|Y1250_THEVO|UPF0179 protein TV1250|Thermoplasma volcanium (strain ATCC 51530

Query: 1 CNTFYKRN 8
CN +Y++N
Sbjct: 109 CNLYYQKN 116




13|SequenceR|70|61|QYWQKCNTFY

>sp|RPO3_METJA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanocaldococcus jannaschii (strain

Query: 3 WQKCNTFY 10
WQ CN Y
Sbjct: 137 WQPCNAVY 144


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WQKCNTFY 10
W KCN Y
Sbjct: 1003 WPKCNVTY 1010


>sp|RADB_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 1 QYWQKC 6
+YW KC
Sbjct: 168 EYWSKC 173


>sp|TRUA_PYRFU|TRNA pseudouridine synthase A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QYWQKCN 7
+ W+KCN
Sbjct: 152 EIWEKCN 158


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 QKCNTFY 10
QKC TF+
Sbjct: 22 QKCGTFF 28


>sp|RF1_METS3|PEPTIDE chain release factor subunit|Methanobrevibacter smithii (strain

Query: 2 YWQKCN 7
YW +CN
Sbjct: 119 YWYQCN 124


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 QYWQKCNTF 9
+YW+K NT+
Sbjct: 18 EYWKKENTY 26


>sp|Y1657_METJA|UNCHARACTERIZED protease MJ1657|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QYWQKCN 7
+YW+ CN
Sbjct: 305 EYWKSCN 311


>sp|PURP_METVS|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus vannielii (strain ATCC

Query: 1 QYWQKCNTF 9
++W+K N F
Sbjct: 174 EFWRKINDF 182


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YWQKCN 7
YW KC+
Sbjct: 172 YWGKCS 177


>sp|SYW_METMA|TRYPTOPHAN--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 WQKC 6
WQKC
Sbjct: 116 WQKC 119


>sp|SYW_METAC|TRYPTOPHAN--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 WQKC 6
WQKC
Sbjct: 116 WQKC 119


>sp|FDHB_METJA|F420-DEPENDENT formate dehydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 1 QYWQKCNTFY 10
+YW +C Y
Sbjct: 275 KYWNRCIKCY 284


>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 QYWQKCNTFY 10
+YW +C Y
Sbjct: 275 EYWSRCIKCY 284


>sp|LYSY_SULAC|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QYWQKCNTFY 10
++W+K FY
Sbjct: 259 EFWKKIIEFY 268


>sp|NTPTH_PYRCJ|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 KCNTFY 10
KC TFY
Sbjct: 115 KCPTFY 120


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 YWQKCNTF 9
Y +KCN F
Sbjct: 126 YCEKCNKF 133


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 QYWQKCNTF 9
+YW+ NT+
Sbjct: 19 EYWKANNTY 27




14|SequenceR|75|66|GCIKRQYWQK

>sp|TRPD_PYRCJ|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 1 GCIKRQ 6
GC+KRQ
Sbjct: 185 GCVKRQ 190


>sp|RS8E_HYPBU|SMALL ribosomal subunit protein eS8|Hyperthermus butylicus (strain DSM

Query: 3 IKRQYW 8
+KR+YW
Sbjct: 23 VKRKYW 28


>sp|PIMT_AERPE|PROTEIN-L-ISOASPARTATE O-methyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 4 KRQYWQ 9
++QYWQ
Sbjct: 252 RKQYWQ 257


>sp|MTD_METPE|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaerula

Query: 1 GCIKRQYWQK 10
GC + W+K
Sbjct: 217 GCFMTKEWEK 226


>sp|MTD_METMJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanoculleus

Query: 1 GCIKRQYWQK 10
GC + W+K
Sbjct: 217 GCFMTKEWEK 226


>sp|MTD_METB6|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanoregula boonei

Query: 1 GCIKRQYWQK 10
GC + W+K
Sbjct: 216 GCFMTKEWEK 225


>sp|Y1650_METJA|UNCHARACTERIZED protein MJ1650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GCIKRQYWQ 9
G KR+ WQ
Sbjct: 62 GSYKRKIWQ 70




15|SequenceR|80|71|IVTSKGCIKR

>sp|IF6_METJA|TRANSLATION initiation factor 6|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IVTSKGCI 8
+VT+KGC+
Sbjct: 155 VVTNKGCL 162


>sp|AATB_METMJ|A-TYPE ATP synthase subunit B|Methanoculleus marisnigri (strain ATCC

Query: 1 IVTSKGCIKR 10
IVT+ G +KR
Sbjct: 31 IVTADGTVKR 40


>sp|Y347_METJA|UNCHARACTERIZED protein MJ0347|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VTSKGCI 8
+T+KGC+
Sbjct: 123 ITTKGCV 129


>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 1 IVTSKGCIK 9
I +S+GC+K
Sbjct: 638 ISSSEGCVK 646


>sp|Y819_PYRHO|UNCHARACTERIZED methyltransferase PH0819|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IVTSKGC 7
++TS+GC
Sbjct: 196 VMTSRGC 202




16|SequenceR|85|76|CCEYSIVTSK

>sp|ATGT_METST|TRNA-GUANINE(15) transglycosylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 CCEYSI 6
CCEY++
Sbjct: 280 CCEYTV 285




17|SequenceR|90|81|KEYGPCCEYS

>sp|ATGT_METST|TRNA-GUANINE(15) transglycosylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 6 CCEYS 10
CCEY+
Sbjct: 280 CCEYT 284


>sp|RNP3_METMP|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain DSM 14266

Query: 2 EYGPCCEY 9
EYG CE+
Sbjct: 47 EYGENCEF 54


>sp|RNP3_METM5|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C5 /

Query: 2 EYGPCCEY 9
EYG CE+
Sbjct: 47 EYGENCEF 54


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 5 PCCEYS 10
PC EYS
Sbjct: 43 PCVEYS 48


>sp|TBP_CENSY|TATA-BOX-BINDING protein|Cenarchaeum symbiosum (strain A)

Query: 5 PCCEY 9
PCC Y
Sbjct: 32 PCCMY 36


>sp|Y989_METJA|UNCHARACTERIZED protein MJ0989|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GPCCE 8
GPCC+
Sbjct: 76 GPCCK 80


>sp|RIBB_METLZ|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanocorpusculum labreanum (strain ATCC

Query: 1 KEYGPCCE 8
+E G CCE
Sbjct: 157 REAGLCCE 164


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 1 KEYGPCCEYS 10
K+Y P CE S
Sbjct: 561 KKYCPICEDS 570


>sp|PYLD_METAC|PYRROLYSINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 PCCE 8
PCCE
Sbjct: 43 PCCE 46


>sp|NROR_PYRFU|NAD(P)H:RUBREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GPCCEYS 10
G C EYS
Sbjct: 259 GDCAEYS 265




18|SequenceR|95|86|KEGPVKEYGP

>sp|DHYS_AERPE|PROBABLE deoxyhypusine synthase|Aeropyrum pernix (strain ATCC 700893

Query: 4 PVKEYGP 10
PV+ YGP
Sbjct: 124 PVESYGP 130


>sp|DHYS_IGNH4|PROBABLE deoxyhypusine synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 PVKEYGP 10
PV+ YGP
Sbjct: 131 PVENYGP 137


>sp|RS2_METMP|SMALL ribosomal subunit protein uS2|Methanococcus maripaludis (strain

Query: 3 GPVKEYG 9
GP+KE+G
Sbjct: 79 GPLKEFG 85


>sp|RS6E_CALMQ|SMALL ribosomal subunit protein eS6|Caldivirga maquilingensis (strain

Query: 2 EGPVKEYG 9
EGPVK+Y
Sbjct: 73 EGPVKKYA 80


>sp|RS2_METM5|SMALL ribosomal subunit protein uS2|Methanococcus maripaludis (strain

Query: 3 GPVKEYG 9
GP+KE+G
Sbjct: 79 GPLKEFG 85


>sp|LEUD_METS5|3-ISOPROPYLMALATE dehydratase small subunit|Metallosphaera sedula (strain ATCC

Query: 2 EGPVKEYG 9
EGPV +YG
Sbjct: 4 EGPVLKYG 11


>sp|DNAG_CALMQ|DNA primase DnaG|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 KEGPVKEYGP 10
K+G V YGP
Sbjct: 150 KQGEVVSYGP 159


>sp|Y130_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5 /

Query: 1 KEGPVKEYGP 10
K+G +K +GP
Sbjct: 208 KDGEIKFFGP 217


>sp|G3P_HALSA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 3 GPVKEYG 9
GP+KEY
Sbjct: 260 GPLKEYA 266


>sp|G3P_HALS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 29341

Query: 3 GPVKEYG 9
GP+KEY
Sbjct: 260 GPLKEYA 266


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 2 EGPVKEYGP 10
E P+ E+GP
Sbjct: 208 EAPLVEFGP 216


>sp|Y392_METJA|ZINC metalloprotease MJ0392|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KEGPVKEY 8
KEG V++Y
Sbjct: 274 KEGTVRDY 281


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 EGPVKEYGP 10
E PV++Y P
Sbjct: 4 EAPVEDYDP 12


>sp|Y153_THEVO|UPF0284 protein TV0153|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GPVKEYG 9
G VKEYG
Sbjct: 206 GAVKEYG 212


>sp|RS14Z_METBU|SMALL ribosomal subunit protein uS14|Methanococcoides burtonii (strain

Query: 1 KEGPVKEYG 9
K+G V++YG
Sbjct: 21 KQGLVRKYG 29


>sp|LIPA_PICTO|LIPOYL synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 KEGPVKEYGP 10
K+ VKEY P
Sbjct: 234 KQLEVKEYSP 243




19|SequenceR|100|91|AAPCGKEGPV

>sp|D89S1_PYRHO|DAMAGE-CONTROL phosphatase PH1575|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 GKEGPV 10
GKEGP+
Sbjct: 183 GKEGPI 188


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 AAPCGK 6
A PCGK
Sbjct: 142 AVPCGK 147


>sp|IF2B_NANEQ|TRANSLATION initiation factor 2 subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 CGKEGPV 10
CG E PV
Sbjct: 129 CGSESPV 135


>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 3 PCGKEGPV 10
P GKEG V
Sbjct: 372 PIGKEGSV 379


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 4 CGKEG 8
CGKEG
Sbjct: 624 CGKEG 628




20|SequenceR|105|96|NSLPLAAPCG

>sp|MDH_PYRHO|MALATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NSLPLAAPCG 10
NS PL AP G
Sbjct: 150 NSRPLVAPTG 159


>sp|MDH_PYRAB|MALATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 NSLPLAAPCG 10
NS PL AP G
Sbjct: 150 NSRPLVAPTG 159


>sp|OGT_METVM|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanocaldococcus vulcanius (strain ATCC 700851

Query: 1 NSLPLAAPC 9
N LPL PC
Sbjct: 120 NPLPLIIPC 128


>sp|OGT_METJA|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NSLPLAAPC 9
N LPL PC
Sbjct: 120 NPLPLIIPC 128


>sp|OGT_ARCFU|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NSLPLAAPC 9
N LP+ PC
Sbjct: 104 NPLPVIIPC 112


>sp|OGT_METTH|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 NSLPLAAPC 9
N PL PC
Sbjct: 134 NPFPLVIPC 142


>sp|CBIM1_METPE|PUTATIVE cobalt transport protein CbiM|Methanosphaerula palustris (strain

Query: 1 NSLPLAAPCG 10
++LPL A CG
Sbjct: 40 STLPLLAVCG 49


>sp|DAPB_METMA|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PLAAPCG 10
P+AA CG
Sbjct: 87 PIAAGCG 93


>sp|DAPB_METAC|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 PLAAPCG 10
P+AA CG
Sbjct: 87 PIAAGCG 93


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NSLPLAAPCG 10
N+ P+A P G
Sbjct: 91 NTQPMAGPAG 100


>sp|SYK_CENSY|LYSINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 NSLPLAAPCG 10
+SLP A CG
Sbjct: 175 SSLPYFAVCG 184


>sp|XACI_HALVD|XYLOSE/ARABINOSE import permease protein XacI|Haloferax volcanii (strain ATCC

Query: 2 SLPLAAPCG 10
SLP A P G
Sbjct: 58 SLPFAPPVG 66


>sp|CBIM2_METLZ|PUTATIVE cobalt transport protein CbiM|Methanocorpusculum labreanum

Query: 3 LPLAAPCG 10
LPL A CG
Sbjct: 42 LPLMAVCG 49


>sp|METXA_METLZ|HOMOSERINE O-acetyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 2 SLPLAAPCG 10
S+PL+ CG
Sbjct: 17 SVPLSLECG 25


>sp|OGT_PYRAE|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 NSLPLAAPC 9
N LP+ PC
Sbjct: 82 NPLPVILPC 90


>sp|CBIM1_METLZ|PUTATIVE cobalt transport protein CbiM|Methanocorpusculum labreanum

Query: 1 NSLPLAAPCG 10
+ LPL A CG
Sbjct: 40 HVLPLMAVCG 49




21|SequenceR|110|101|LTEYLNSLPL

>sp|TRPD_NITMS|ANTHRANILATE phosphoribosyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 EYLNSLPL 10
EYL+ LPL
Sbjct: 199 EYLDRLPL 206


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EYLNSLP 9
EY N+LP
Sbjct: 428 EYFNTLP 434


>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LTEYLNSL 8
L EYLN+L
Sbjct: 210 LQEYLNTL 217


>sp|Y1535_METJA|UNCHARACTERIZED protein MJ1535|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TEYLNSLPL 10
T Y+N LPL
Sbjct: 109 TYYINELPL 117


>sp|RS3A_ARCFU|SMALL ribosomal subunit protein eS1|Archaeoglobus fulgidus (strain ATCC

Query: 3 EYLNSL 8
EYLNSL
Sbjct: 93 EYLNSL 98


>sp|PRIS_METAR|DNA primase small subunit PriS|Methanocella arvoryzae (strain DSM

Query: 1 LTEYLNSLP 9
L +YL S+P
Sbjct: 58 LADYLRSMP 66


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LTEYLNSL 8
L EY+NSL
Sbjct: 409 LKEYINSL 416


>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LTEYLNSLPL 10
+ +Y+N LPL
Sbjct: 165 VNQYMNELPL 174


>sp|Y795_PYRHO|UPF0148 protein PH0795|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LTEYLNSLP 9
LT+ NSLP
Sbjct: 67 LTQLANSLP 75


>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LTEYLNSLPL 10
L EY N LP
Sbjct: 663 LNEYNNQLPF 672




22|SequenceR|115|106|SGVVGLTEYL

>sp|MFNA_METMJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoculleus marisnigri

Query: 2 GVVGLTEY 9
GVVG TEY
Sbjct: 161 GVVGTTEY 168


>sp|NURA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 2 GVVGLTEY 9
GVVGLT +
Sbjct: 320 GVVGLTSF 327


>sp|MOAE_THEVO|MOLYBDOPTERIN synthase catalytic subunit|Thermoplasma volcanium (strain ATCC

Query: 2 GVVGLTE 8
G+VGLTE
Sbjct: 85 GLVGLTE 91


>sp|GLCD1_HALTV|GLUCOSE 1-dehydrogenase 1|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 SGVVGLTEY 9
SGV GL EY
Sbjct: 329 SGVYGLEEY 337


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 3 VVGLTEYL 10
V+GL EY+
Sbjct: 598 VIGLREYI 605


>sp|PURE_METSM|PROBABLE N5-carboxyaminoimidazole ribonucleotide mutase|Methanobrevibacter

Query: 2 GVVGLTE 8
G+VGLTE
Sbjct: 264 GLVGLTE 270




23|SequenceR|120|111|LQTTTSGVVG

***** No hits found ******


24|SequenceR|125|116|TRDTYLQTTT

***** No hits found ******


25|SequenceR|130|121|PRLKETRDTY

>sp|HIS3_METLZ|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PRLKETRDTY 10
PRLK+ D Y
Sbjct: 112 PRLKDPADIY 121


>sp|AMPA_AERPE|PROBABLE cytosol aminopeptidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PRLKETRDTY 10
PRL +R+T+
Sbjct: 8 PRLSVSRETF 17


>sp|Y2113_ARCFU|UNCHARACTERIZED protein AF_2113|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RLKETRDTY 10
RL+E R+TY
Sbjct: 58 RLRELRETY 66


>sp|Y1403_METJA|UNCHARACTERIZED protein MJ1403|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 ETRDTY 10
+TRDTY
Sbjct: 223 QTRDTY 228


>sp|BARAC_PYRHO|BROAD substrate specificity amino-acid racemase|Pyrococcus horikoshii

Query: 2 RLKETRDTY 10
RL+E ++TY
Sbjct: 361 RLRELQETY 369




26|SequenceR|135|126|PGEMEPRLKE

>sp|GVPE2_HALSA|TRANSCRIPTIONAL activator GvpE2|Halobacterium salinarum (strain ATCC 700922

Query: 1 PGEMEPRLKE 10
PG M P LK+
Sbjct: 120 PGTMYPHLKQ 129


>sp|KAD6_METKA|PUTATIVE adenylate kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 PGEMEPRLKE 10
P E+E RLKE
Sbjct: 93 PSELERRLKE 102


>sp|TRUA_PYRAE|TRNA pseudouridine synthase A|Pyrobaculum aerophilum (strain ATCC

Query: 1 PGEMEPRLK 9
P +EPRL+
Sbjct: 21 PNSLEPRLR 29


>sp|Y27A_AERPE|UPF0175 protein APE_0276a|Aeropyrum pernix (strain ATCC 700893

Query: 1 PGEMEPRLK 9
PGE+E RL+
Sbjct: 21 PGELEKRLR 29


>sp|ACEB_HALVD|MALATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 PGEMEPRL 8
PGE+ PR+
Sbjct: 78 PGEIHPRM 85


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 1 PGEMEPRL 8
PGE++P++
Sbjct: 707 PGELQPKI 714


>sp|AMASY_HALMA|APPARENT malate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PGEMEPRL 8
PGE+ PR+
Sbjct: 79 PGEIHPRV 86


>sp|AROA_METBU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 PGEMEPRLKE 10
PG + RLKE
Sbjct: 222 PGNQKYRLKE 231


>sp|ILVD_METM6|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C6 /

Query: 2 GEMEPRLKE 10
GE EP++K+
Sbjct: 522 GEFEPKIKK 530


>sp|ILVD_METMP|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GEMEPRLKE 10
GE EP++K+
Sbjct: 522 GEFEPKIKK 530


>sp|TMG10_METTH|TRNA (guanine(10)-N2)-dimethyltransferase|Methanothermobacter

Query: 1 PGEMEPRL 8
PG M P+L
Sbjct: 168 PGSMSPKL 175


>sp|Y870_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 PGEMEPRLK 9
PG EP LK
Sbjct: 20 PGRTEPTLK 28


>sp|KTHY_PYRAE|PROBABLE thymidylate kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 EMEPRLKE 10
E+EPR++E
Sbjct: 73 EIEPRVRE 80


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GEMEPRLKE 10
GE+EP ++E
Sbjct: 409 GELEPEVRE 417


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GEMEPRLKE 10
G+MEP + E
Sbjct: 191 GDMEPEIGE 199




27|SequenceR|140|131|ITFSGPGEME

>sp|LIPB1_PICTO|PROBABLE octanoyltransferase 1|Picrophilus torridus (strain ATCC 700027

Query: 1 ITFSGPGEM 9
IT+ GPG++
Sbjct: 74 ITYHGPGQL 82


>sp|SYY_AERPE|TYROSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 TFSGPGEME 10
+ GPG ME
Sbjct: 216 SLQGPGRME 224


>sp|Y1261_METTH|UPF0104 membrane protein MTH_1261|Methanothermobacter thermautotrophicus

Query: 1 ITFSGPGEME 10
I GPGE+E
Sbjct: 20 ILIIGPGEIE 29


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 TFSGPGEM 9
T+SG GEM
Sbjct: 883 TYSGEGEM 890


>sp|RS15_CENSY|SMALL ribosomal subunit protein uS15|Cenarchaeum symbiosum (strain A)

Query: 5 GPGEME 10
GPGE+E
Sbjct: 28 GPGEVE 33




28|SequenceR|145|136|NSPAFITFSG

>sp|RS5_NANEQ|SMALL ribosomal subunit protein uS5|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 PAFITFSG 10
P FI FSG
Sbjct: 215 PFFIKFSG 222


>sp|COFG_METBU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PAFITFS 9
P F+TFS
Sbjct: 2 PEFVTFS 8


>sp|Y114_METTH|UNCHARACTERIZED protein MTH_114|Methanothermobacter thermautotrophicus (strain

Query: 1 NSPAFITFSG 10
N PA TF G
Sbjct: 47 NEPATFTFHG 56




29|SequenceR|150|141|SAWAENSPAF

>sp|Y2221_ARCFU|UNCHARACTERIZED protein AF_2221|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WAENSPAF 10
W ENSP F
Sbjct: 267 WIENSPKF 274


>sp|SYFB_METS5|PHENYLALANINE--TRNA ligase beta subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 SAWAENSPA 9
S W NSPA
Sbjct: 186 SVWDSNSPA 194


>sp|AATB_METB6|A-TYPE ATP synthase subunit B|Methanoregula boonei (strain DSM 21154

Query: 3 WAENSPA 9
WA NSP+
Sbjct: 117 WARNSPS 123


>sp|LEU1_PYRFU|2-ISOPROPYLMALATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SAWAENSP 8
SAW+ N P
Sbjct: 419 SAWSSNGP 426


>sp|QUEE_METTH|7-CARBOXY-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 WAENSP 8
WA+N+P
Sbjct: 214 WAQNTP 219


>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain ATCC

Query: 3 WAENSP 8
WAEN P
Sbjct: 174 WAENVP 179


>sp|SYC_META3|CYSTEINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SAWAENSPAF 10
S W E PA+
Sbjct: 194 SPWGEGRPAW 203




30|SequenceR|155|146|VEAPLSAWAE

>sp|Y995_META3|UPF0288 protein Maeo_0995|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 EAPLSAW 8
+AP+SAW
Sbjct: 378 KAPVSAW 384


>sp|Y1412_METJA|UPF0288 protein MJ1412|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EAPLSAW 8
+AP++AW
Sbjct: 378 KAPITAW 384


>sp|CS3HD_PYRFU|CRISPR-ASSOCIATED endonuclease Cas3-HD|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VEAPLSAW 8
+EA L+AW
Sbjct: 15 IEAMLAAW 22


>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 EAPLSAWA 9
EAP+ WA
Sbjct: 518 EAPIVQWA 525


>sp|NEP1_THEON|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus onnurineus (strain

Query: 2 EAPLSAW 8
+APL AW
Sbjct: 198 KAPLMAW 204




31|SequenceR|160|151|VLSDLVEAPL

>sp|PYRE_ARCFU|OROTATE phosphoribosyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LSDLVEA 8
LSDL+EA
Sbjct: 163 LSDLIEA 169




32|SequenceR|165|156|INVNSVLSDL

>sp|RPO11_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo11|Pyrobaculum aerophilum (strain ATCC

Query: 3 VNSVLSDL 10
VN++LSDL
Sbjct: 76 VNAILSDL 83


>sp|MTAA_METBF|METHYLCOBAMIDE:COM methyltransferase MtaA|Methanosarcina barkeri (strain Fusaro /

Query: 3 VNSVLSDL 10
VN++LSD+
Sbjct: 242 VNAILSDM 249


>sp|MTAA_METBA|METHYLCOBAMIDE:COM methyltransferase MtaA|Methanosarcina barkeri

Query: 3 VNSVLSDL 10
VN++LSD+
Sbjct: 242 VNAILSDM 249


>sp|T1M2_METJA|TYPE I restriction enzyme MjaVIII|Methanocaldococcus jannaschii

Query: 2 NVNSVLSDL 10
NVN VLS L
Sbjct: 41 NVNEVLSKL 49


>sp|PYRB_CALMQ|ASPARTATE carbamoyltransferase catalytic subunit|Caldivirga maquilingensis

Query: 2 NVNSVLSDL 10
N+N VLS+L
Sbjct: 212 NLNEVLSEL 220




33|SequenceR|170|161|ANLLEINVNS

>sp|XACR_HALVD|HTH-TYPE transcriptional regulator XacR|Haloferax volcanii (strain ATCC

Query: 1 ANLLEINVN 9
AN++E+N+N
Sbjct: 242 ANVVELNIN 250


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ANLLEINVN 9
ANL+E+NV+
Sbjct: 204 ANLIEMNVD 212


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ANLLEINVNS 10
AN+ E++VN+
Sbjct: 788 ANVTEVSVNA 797


>sp|PYRDB_SACS2|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Saccharolobus solfataricus

Query: 1 ANLLEINVNS 10
A ++EINV+S
Sbjct: 111 AKIIEINVSS 120




34|SequenceR|175|166|MHYRLANLLE

>sp|REG9_PYRFU|UNCHARACTERIZED HTH-type transcriptional regulator PF0250|Pyrococcus furiosus

Query: 1 MHYRLANLLE 10
+HYR+ LLE
Sbjct: 38 VHYRIKRLLE 47


>sp|DAPA_METTP|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 MHYRLANLL 9
+HYRLA L+
Sbjct: 231 LHYRLAPLV 239


>sp|RS3_METS3|SMALL ribosomal subunit protein uS3|Methanobrevibacter smithii (strain

Query: 1 MHYRLANLLE 10
M Y++AN+L+
Sbjct: 94 MAYKIANMLQ 103


>sp|DAPA_META3|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 MHYRLANLLE 10
+HY+L NL++
Sbjct: 229 IHYKLFNLMK 238


>sp|FEN_PICTO|FLAP endonuclease 1|Picrophilus torridus (strain ATCC 700027

Query: 3 YRLANLLE 10
YR +NLLE
Sbjct: 63 YRTSNLLE 70


>sp|TKTN_METJA|PUTATIVE transketolase N-terminal section|Methanocaldococcus jannaschii

Query: 2 HYRLANLL 9
HY+L NL+
Sbjct: 166 HYKLDNLI 173


>sp|FEN_METTP|FLAP endonuclease 1|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 YRLANLLE 10
YR+ NL+E
Sbjct: 63 YRMTNLIE 70


>sp|DPM1_PYRFU|DOLICHOL-PHOSPHATE mannosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MHYRLANLL 9
+HY +ANL+
Sbjct: 324 IHYLIANLV 332


>sp|FEN_NANEQ|FLAP endonuclease 1|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 MHYRLANLLE 10
+ YR NLLE
Sbjct: 62 LFYRTINLLE 71


>sp|FEN_PYRCJ|FLAP endonuclease 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 MHYRLANLLE 10
+ YR NLLE
Sbjct: 65 LFYRTINLLE 74


>sp|FEN_PYRAE|FLAP endonuclease 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 MHYRLANLLE 10
+ YR NLLE
Sbjct: 65 LFYRTINLLE 74


>sp|Y1433_METJA|UNCHARACTERIZED protein MJ1433|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YRLANLLE 10
Y+L NLLE
Sbjct: 137 YKLKNLLE 144




35|SequenceR|180|171|VRRGVMHYRL

>sp|Y310_ARCFU|UNCHARACTERIZED protein AF_0310|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VRRGVMHYR 9
+RRG++ YR
Sbjct: 165 LRRGILFYR 173


>sp|KCY_SACS2|CYTIDYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VRRGVMHYR 9
+RR MHY+
Sbjct: 125 IRREYMHYK 133


>sp|HIS6_METJA|IMIDAZOLE glycerol phosphate synthase subunit|Methanocaldococcus jannaschii

Query: 4 GVMHYR 9
G++HYR
Sbjct: 246 GILHYR 251


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VRRGVMHYR 9
++RG M YR
Sbjct: 261 IKRGGMEYR 269


>sp|TYW2_METJA|TRNA(PHE) (4-demethylwyosine(37)-C(7))

Query: 3 RGVMHY 8
RGV+HY
Sbjct: 189 RGVIHY 194




36|SequenceR|185|176|LEDTLVRRGV

>sp|Y781_METJA|UNCHARACTERIZED protein MJ0781|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LEDTLVRRGV 10
L+D+L RRG+
Sbjct: 650 LKDSLERRGI 659


>sp|NIKR_SACS2|PUTATIVE nickel-responsive regulator|Saccharolobus solfataricus (strain

Query: 1 LEDTLVRRGV 10
LED ++R+G+
Sbjct: 18 LEDFIIRKGI 27


>sp|RIBL_NATMM|FAD synthase|Natrialba magadii (strain ATCC 43099

Query: 1 LEDTLVRRGV 10
+ED L RRG+
Sbjct: 105 IEDELERRGI 114


>sp|MFNA_METMJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoculleus marisnigri

Query: 1 LEDTLVRR 8
LED LVRR
Sbjct: 64 LEDLLVRR 71


>sp|CHED2_METAC|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina acetivorans

Query: 1 LEDTLVRRGV 10
+E+TLV+R +
Sbjct: 175 VEETLVKRNI 184


>sp|PIMT_KORCO|PROTEIN-L-ISOASPARTATE O-methyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LEDTLVRRGV 10
L ++LVRRG+
Sbjct: 6 LIESLVRRGI 15


>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 2 EDTLVRRG 9
+DT +RRG
Sbjct: 240 KDTYIRRG 247


>sp|GVPN2_HALSA|GAS vesicle ATPase GvpN2|Halobacterium salinarum (strain ATCC 700922

Query: 1 LEDTLVRRGV 10
+E+TL RGV
Sbjct: 332 IEETLADRGV 341




37|SequenceR|190|181|TMGHKLEDTL

>sp|ELP3_METIM|TRNA uridine(34) acetyltransferase|Methanocaldococcus infernus (strain

Query: 3 GHKLEDTL 10
GH +EDT+
Sbjct: 247 GHSVEDTI 254


>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii (strain

Query: 3 GHKLEDTL 10
GH +EDT+
Sbjct: 253 GHTVEDTI 260


>sp|HYD1A_PYRFU|SULFHYDROGENASE 1 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TMGHKLEDTL 10
T+G KLE+ L
Sbjct: 49 TIGKKLEEAL 58


>sp|AROB_PYRAE|3-DEHYDROQUINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TMGHKLEDTL 10
T+GH LE L
Sbjct: 230 TVGHALERVL 239


>sp|QUEC_METVS|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 TMGHKLEDTL 10
T G +LED L
Sbjct: 175 TFGKRLEDEL 184


>sp|MVK_PYRAB|MEVALONATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 MGHKLE 7
MGHK+E
Sbjct: 146 MGHKVE 151


>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea (strain

Query: 2 MGHKLEDTL 10
M H L+DTL
Sbjct: 719 MDHLLKDTL 727




38|SequenceR|195|186|YMSTLTMGHK

>sp|AATB_PICTO|A-TYPE ATP synthase subunit B|Picrophilus torridus (strain ATCC 700027

Query: 2 MSTLTMGHK 10
M+TL MG K
Sbjct: 139 MNTLVMGQK 147


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 YMSTLTMGHK 10
YM+ T+ HK
Sbjct: 523 YMAYYTLSHK 532




39|SequenceR|200|191|INSNQYMSTL

>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 INSNQYMSTL 10
IN NQY+ TL
Sbjct: 334 INDNQYLITL 343


>sp|Y666_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0666|Methanocaldococcus

Query: 1 INSNQYM 7
INSN YM
Sbjct: 210 INSNSYM 216


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 4 NQYMSTL 10
NQYM+T+
Sbjct: 104 NQYMATI 110


>sp|DTDA_CALMQ|D-AMINOACYL-TRNA deacylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 INSNQYMSTL 10
IN+N+Y S L
Sbjct: 30 INTNEYSSDL 39




40|SequenceR|205|196|YHHIQINSNQ

>sp|HIS8_NATPD|HISTIDINOL-PHOSPHATE aminotransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YHHIQINS 8
YHH Q+NS
Sbjct: 125 YHHGQVNS 132


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 HHIQINS 8
HHIQ+N+
Sbjct: 386 HHIQVNN 392


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 HHIQINS 8
HHIQ+N+
Sbjct: 386 HHIQVNN 392


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 HHIQINS 8
HHIQ+N+
Sbjct: 386 HHIQVNN 392


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 HHIQINS 8
HHIQ+N+
Sbjct: 386 HHIQVNN 392


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 HHIQINS 8
HHIQ+N+
Sbjct: 386 HHIQVNN 392


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 HHIQINS 8
HHIQ+N+
Sbjct: 386 HHIQVNN 392


>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 HHIQINS 8
HHIQ+N+
Sbjct: 386 HHIQVNN 392


>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 1 YHHIQINSNQ 10
+HH +NSN
Sbjct: 308 FHHAGLNSNH 317


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 YHHIQINSN 9
YH++ IN N
Sbjct: 1126 YHNVIINEN 1134


>sp|HIS8_HALMA|HISTIDINOL-PHOSPHATE aminotransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 YHHIQIN 7
YHH ++N
Sbjct: 125 YHHGEVN 131


>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 3 HIQINSN 9
H+Q+N+N
Sbjct: 8 HVQLNTN 14




41|SequenceR|210|201|VIGNPYHHIQ

>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VIGNPYH 7
+ GNPYH
Sbjct: 78 ISGNPYH 84


>sp|THIC_SACI6|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 IGNPYHHI 9
+G PY HI
Sbjct: 300 VGAPYDHI 307


>sp|THIC_SACI4|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 IGNPYHHI 9
+G PY HI
Sbjct: 300 VGAPYDHI 307


>sp|THIC_SACI3|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 IGNPYHHI 9
+G PY HI
Sbjct: 300 VGAPYDHI 307


>sp|THIC_SACI2|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 IGNPYHHI 9
+G PY HI
Sbjct: 300 VGAPYDHI 307


>sp|THIC2_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IGNPYHHI 9
+G PY HI
Sbjct: 300 VGAPYDHI 307


>sp|AROE_PYRFU|SHIKIMATE dehydrogenase (NADP(+))|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VIGNPYHH 8
+IGNP H
Sbjct: 11 IIGNPVKH 18


>sp|TOP6B_THESM|TYPE 2 DNA topoisomerase 6|Thermococcus sibiricus (strain DSM 12597

Query: 2 IGNPYHHIQ 10
I NP+ HI+
Sbjct: 201 IANPHAHIE 209


>sp|TOP6B_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 2 IGNPYHHIQ 10
I NP+ HI+
Sbjct: 198 IANPHAHIE 206


>sp|HMGCS_METS5|HYDROXYMETHYLGLUTARYL-COA synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VIGNPYH 7
+IGNPY+
Sbjct: 264 LIGNPYN 270


>sp|TOP6B_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IGNPYHHIQ 10
I NP+ HI+
Sbjct: 199 IANPHAHIE 207


>sp|TOP6B_THEON|TYPE 2 DNA topoisomerase 6|Thermococcus onnurineus (strain NA1)

Query: 2 IGNPYHHIQ 10
I NP+ HI+
Sbjct: 198 IANPHAHIE 206


>sp|TRUA_HALMA|TRNA pseudouridine synthase A|Haloarcula marismortui (strain ATCC

Query: 3 GNPYHHIQ 10
G PYH Q
Sbjct: 10 GQPYHGFQ 17


>sp|AMPD_PYRHO|ANHYDROMEVALONATE phosphate decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VIGNPYH 7
V+GNP H
Sbjct: 176 VLGNPVH 182


>sp|TOP6B_THEGJ|TYPE 2 DNA topoisomerase 6|Thermococcus gammatolerans (strain DSM 15229

Query: 2 IGNPYHHIQ 10
I NP+ HI+
Sbjct: 198 IANPHAHIE 206


>sp|RAD50_METMP|DNA double-strand break repair Rad50|Methanococcus maripaludis (strain

Query: 5 PYHHIQ 10
PY HIQ
Sbjct: 883 PYSHIQ 888


>sp|FLPA_METMJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanoculleus marisnigri (strain

Query: 4 NPYHH 8
+PYHH
Sbjct: 185 DPYHH 189


>sp|HMGCS_SULTO|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IGNPYH 7
IGNPY+
Sbjct: 265 IGNPYN 270


>sp|HMGCS_SULAC|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IGNPYH 7
IGNPY+
Sbjct: 265 IGNPYN 270


>sp|TOP6B_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 2 IGNPYHHIQ 10
I NP+ HI+
Sbjct: 199 IANPHAHIE 207


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VIGNPYHHIQ 10
VIG PY ++
Sbjct: 1055 VIGTPYGEVE 1064


>sp|HMGCS_SACS2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IGNPYH 7
IGNPY+
Sbjct: 267 IGNPYN 272


>sp|TRUA_HALSA|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC

Query: 3 GNPYHHIQ 10
G PYH Q
Sbjct: 12 GRPYHGFQ 19


>sp|TRUA_HALS3|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC

Query: 3 GNPYHHIQ 10
G PYH Q
Sbjct: 12 GRPYHGFQ 19


>sp|HMGCS_SACI7|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 IGNPYH 7
IGNPY+
Sbjct: 267 IGNPYN 272


>sp|HMGCS_SACI2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 IGNPYH 7
IGNPY+
Sbjct: 267 IGNPYN 272


>sp|HMGCS_SACI1|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 IGNPYH 7
IGNPY+
Sbjct: 267 IGNPYN 272


>sp|AROE_NATPD|SHIKIMATE dehydrogenase (NADP(+))|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VIGNPYHH 8
+IGNP H
Sbjct: 6 LIGNPVEH 13


>sp|CBIA_METM7|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C7 /

Query: 2 IGNPY 6
IGNPY
Sbjct: 435 IGNPY 439


>sp|CBIA_METM5|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C5 /

Query: 2 IGNPY 6
IGNPY
Sbjct: 435 IGNPY 439


>sp|HMGCS_SACI6|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 IGNPYH 7
IGNPY+
Sbjct: 267 IGNPYN 272


>sp|HMGCS_SACI4|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 IGNPYH 7
IGNPY+
Sbjct: 267 IGNPYN 272


>sp|HMGCS_SACI3|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 IGNPYH 7
IGNPY+
Sbjct: 267 IGNPYN 272


>sp|FAU1_HYPBU|PROBABLE ribonuclease FAU-1|Hyperthermus butylicus (strain DSM 5456

Query: 5 PYHH 8
PYHH
Sbjct: 276 PYHH 279


>sp|FAU1_IGNH4|PROBABLE ribonuclease FAU-1|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 PYHH 8
PYHH
Sbjct: 266 PYHH 269


>sp|DNPH1_METBF|PUTATIVE 2'-deoxynucleoside 5'-phosphate N-hydrolase 1|Methanosarcina

Query: 1 VIGNPYH 7
V+GNP H
Sbjct: 129 VLGNPDH 135


>sp|RBL_THEON|RIBULOSE bisphosphate carboxylase|Thermococcus onnurineus (strain NA1)

Query: 4 NPYHHI 9
NPYH I
Sbjct: 291 NPYHGI 296


>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 4 NPYHHI 9
NPYH I
Sbjct: 291 NPYHGI 296


>sp|DCD_HYPBU|DCTP deaminase|Hyperthermus butylicus (strain DSM 5456

Query: 2 IGNPYH 7
+ NPYH
Sbjct: 156 VANPYH 161


>sp|Y804_METJA|UNCHARACTERIZED protein MJ0804|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IGNPYHH 8
I NP HH
Sbjct: 35 IENPQHH 41


>sp|HIS7_CENSY|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Cenarchaeum symbiosum (strain A)

Query: 1 VIGNPYHHIQ 10
++ PYH I+
Sbjct: 108 LVKRPYHRIE 117


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VIGNPY 6
V GNPY
Sbjct: 363 VFGNPY 368


>sp|AROE_HALWD|SHIKIMATE dehydrogenase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VIGNPYHH 8
+IGNP H
Sbjct: 6 LIGNPVEH 13


>sp|THIC_SULAC|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IGNPYHH 8
+G PY H
Sbjct: 300 VGAPYDH 306


>sp|RL21_THEAC|LARGE ribosomal subunit protein eL21|Thermoplasma acidophilum (strain

Query: 3 GNPYHHIQ 10
G PYH Q
Sbjct: 52 GMPYHRFQ 59


>sp|THIC1_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IGNPYHH 8
+G PY H
Sbjct: 300 VGAPYDH 306


>sp|RL21_THEVO|LARGE ribosomal subunit protein eL21|Thermoplasma volcanium (strain

Query: 3 GNPYHHIQ 10
G PYH Q
Sbjct: 52 GMPYHRFQ 59


>sp|LYSY_THEKO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 5 PYHH 8
PYHH
Sbjct: 194 PYHH 197


>sp|THIC_SULTO|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IGNPYHH 8
+G PY H
Sbjct: 300 VGAPYDH 306




42|SequenceR|215|206|ACNVTVIGNP

>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 CNVTVIGN 9
CNVT+ GN
Sbjct: 472 CNVTISGN 479


>sp|Y1111_HALSA|UNCHARACTERIZED GTP-binding protein VNG_1111G|Halobacterium salinarum (strain ATCC

Query: 3 NVTVIGNP 10
NVT+ GNP
Sbjct: 213 NVTIRGNP 220


>sp|ACDB2_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 2 CNVTVIGNP 10
C+VT+I +P
Sbjct: 144 CDVTIITDP 152


>sp|SYE_SULAC|GLUTAMATE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 CNVTVIGN 9
CNVTV G+
Sbjct: 472 CNVTVNGD 479


>sp|NADE_METJA|NH(3)-DEPENDENT NAD(+) synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ACNVTVIGN 9
AC++ IGN
Sbjct: 157 ACDIRPIGN 165


>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 1 ACNVTVIGNP 10
+C VT+ G P
Sbjct: 55 SCAVTINGEP 64




43|SequenceR|220|211|AKLLRACNVT

>sp|ILVD_METKA|DIHYDROXY-ACID dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 3 LLRACNVT 10
LLRAC +T
Sbjct: 18 LLRACGLT 25


>sp|ACDD_METMA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina mazei

Query: 2 KLLRACNV 9
KL++ CNV
Sbjct: 297 KLMKQCNV 304


>sp|ACDD2_METTE|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 2 KLLRACNV 9
KL++ CNV
Sbjct: 298 KLMKQCNV 305


>sp|ACDD2_METAC|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 2 KLLRACNV 9
KL++ CNV
Sbjct: 297 KLMKQCNV 304


>sp|ACDD1_METTE|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 2 KLLRACNV 9
KL++ CNV
Sbjct: 297 KLMKQCNV 304


>sp|ACDD1_METAC|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 2 KLLRACNV 9
KL++ CNV
Sbjct: 297 KLMKQCNV 304




44|SequenceR|225|216|TAHHDAKLLR

>sp|KAE1_THESM|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus sibiricus

Query: 2 AHHDAKLLR 10
A H AKLLR
Sbjct: 44 AEHHAKLLR 52


>sp|FEN_THEPD|FLAP endonuclease 1|Thermofilum pendens (strain DSM 2475

Query: 4 HDAKLL 9
HDAKLL
Sbjct: 135 HDAKLL 140


>sp|PROB_METAC|GLUTAMATE 5-kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 HHDAKLL 9
H DAKLL
Sbjct: 198 HSDAKLL 204


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 AHHDAKLLR 10
A HDAK R
Sbjct: 482 ARHDAKATR 490


>sp|KAE1_PYRFU|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus furiosus

Query: 2 AHHDAKLLR 10
A H AKLL+
Sbjct: 44 AEHHAKLLK 52


>sp|PYRH_CENSY|URIDYLATE kinase|Cenarchaeum symbiosum (strain A)

Query: 3 HHDAKLLR 10
H DA++LR
Sbjct: 154 HSDARMLR 161




45|SequenceR|230|221|HVVGNTAHHD

>sp|GCSPA_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 HVVGNTAHHD 10
H + N+AH D
Sbjct: 4 HYIPNSAHKD 13


>sp|RL18_METAR|LARGE ribosomal subunit protein uL18|Methanocella arvoryzae (strain DSM

Query: 1 HVVGNTA 7
H+ GNTA
Sbjct: 148 HIAGNTA 154


>sp|Y1020_METJA|UNCHARACTERIZED protein MJ1020|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HVVGNTAHHD 10
H +GN+ H D
Sbjct: 100 HDIGNSVHRD 109


>sp|Y601_METMP|PROBABLE minor pilin MMP0601|Methanococcus maripaludis (strain DSM 14266

Query: 1 HVVGNTAHHD 10
H+ NT HD
Sbjct: 31 HMTKNTVSHD 40


>sp|Y2097_ARCFU|PUTATIVE nickel insertion protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VVGNTAHHD 10
++G TA HD
Sbjct: 232 ILGETAFHD 240


>sp|GCSPA_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 HVVGNTAHHD 10
H + N+AH D
Sbjct: 4 HYLPNSAHKD 13


>sp|RS28_METMA|SMALL ribosomal subunit protein eS28|Methanosarcina mazei (strain ATCC

Query: 2 VVGNTAHH 9
V+GNT H
Sbjct: 17 VIGNTGMH 24


>sp|RS28_METAC|SMALL ribosomal subunit protein eS28|Methanosarcina acetivorans (strain

Query: 2 VVGNTAHH 9
V+GNT H
Sbjct: 20 VIGNTGMH 27


>sp|WECB_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 HVVGNT 6
H+VGNT
Sbjct: 164 HIVGNT 169


>sp|RADA_METBF|DNA repair and recombination protein|Methanosarcina barkeri (strain

Query: 1 HVVGNTA 7
HVVG+TA
Sbjct: 278 HVVGHTA 284


>sp|PYRH_METBU|URIDYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 3 VGNTAH 8
+GNTAH
Sbjct: 83 LGNTAH 88




46|SequenceR|235|226|VKDILHVVGN

>sp|NIFD_METMP|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 1 VKDILHVV 8
+KD+LHVV
Sbjct: 62 IKDVLHVV 69


>sp|NIFD_METMI|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 1 VKDILHVV 8
+KD+LHVV
Sbjct: 62 IKDVLHVV 69


>sp|DNLI_METM7|DNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 KDILHVVGN 10
+D LHV+GN
Sbjct: 475 EDNLHVIGN 483


>sp|DNLI_METM6|DNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 KDILHVVGN 10
+D LHV+GN
Sbjct: 475 EDNLHVIGN 483


>sp|CAS7_HALVD|CRISPR-ASSOCIATED protein Cas7|Haloferax volcanii (strain ATCC 29605

Query: 3 DILHVVGN 10
D LHVVG+
Sbjct: 293 DTLHVVGD 300


>sp|URIC_HALVD|URICASE volcanii (strain ATCC 29605

Query: 1 VKDILHVV 8
V+DI HVV
Sbjct: 226 VRDIAHVV 233


>sp|RL2_THEVO|LARGE ribosomal subunit protein uL2|Thermoplasma volcanium (strain ATCC

Query: 1 VKDILHVVG 9
VKDI+H G
Sbjct: 38 VKDIIHAPG 46


>sp|NIFD_METTM|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 1 VKDILHVV 8
+KD LHV+
Sbjct: 61 IKDALHVI 68


>sp|NIFD_METTH|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 1 VKDILHVV 8
+KD LHV+
Sbjct: 61 IKDALHVI 68


>sp|MTBA_METBA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina barkeri

Query: 1 VKDILHVVGN 10
V +LH+ GN
Sbjct: 234 VATVLHICGN 243


>sp|TF2B_AERPE|TRANSCRIPTION initiation factor IIB|Aeropyrum pernix (strain ATCC 700893

Query: 2 KDILHVVG 9
K+I HVVG
Sbjct: 283 KEIAHVVG 290


>sp|MTBA_METMA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VKDILHVVGN 10
V +LH+ GN
Sbjct: 234 VATVLHICGN 243


>sp|DNLI_METMP|DNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 5 LHVVGN 10
LHV+GN
Sbjct: 478 LHVIGN 483


>sp|DNLI_METM5|DNA ligase|Methanococcus maripaludis (strain C5 /

Query: 5 LHVVGN 10
LHV+GN
Sbjct: 478 LHVIGN 483


>sp|RADA_PYRNV|DNA repair and recombination protein|Pyrobaculum neutrophilum (strain

Query: 1 VKDILHVVGN 10
VK++ VVGN
Sbjct: 54 VKELAEVVGN 63


>sp|RL2_THEPD|LARGE ribosomal subunit protein uL2|Thermofilum pendens (strain DSM

Query: 1 VKDILHVVG 9
VKD+LH G
Sbjct: 47 VKDLLHEPG 55


>sp|MTBA_METAC|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina acetivorans (strain ATCC

Query: 1 VKDILHVVGN 10
V +LH+ GN
Sbjct: 234 VGTVLHICGN 243


>sp|Y2001_METTM|UNCHARACTERIZED protein MTBMA_p00010|Methanothermobacter marburgensis (strain ATCC

Query: 2 KDILHVVG 9
+DI H+VG
Sbjct: 378 RDIKHIVG 385


>sp|DNLI_METVS|DNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 5 LHVVGN 10
LHV+GN
Sbjct: 478 LHVIGN 483


>sp|RADA_PYRIL|DNA repair and recombination protein|Pyrobaculum islandicum (strain

Query: 1 VKDILHVVGN 10
VK++ +VGN
Sbjct: 54 VKELAEIVGN 63


>sp|RL2_THEAC|LARGE ribosomal subunit protein uL2|Thermoplasma acidophilum (strain

Query: 1 VKDILHVVG 9
+KDI+H G
Sbjct: 38 IKDIIHAPG 46


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KDILHVVGN 10
KDI ++GN
Sbjct: 1644 KDITQIIGN 1652


Query: 2 KDILHVVGN 10
KDI ++GN
Sbjct: 1977 KDITQIIGN 1985




47|SequenceR|240|231|TITSIVKDIL

>sp|SRP54_METBU|SIGNAL recognition particle 54 kDa|Methanococcoides burtonii (strain DSM

Query: 1 TITSIVKDI 9
T+T +VKDI
Sbjct: 27 TVTEVVKDI 35


>sp|HMGCS_PYRCJ|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 TITSIVKD 8
T+T +VKD
Sbjct: 308 TVTDVVKD 315


>sp|CAS1B_METHJ|PUTATIVE CRISPR-associated endonuclease Cas1 2|Methanospirillum hungatei

Query: 1 TITSIVKD 8
TITS+VK+
Sbjct: 46 TITSLVKE 53


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TITSIVKDIL 10
T++ I+KD+L
Sbjct: 703 TLSRIIKDLL 712




48|SequenceR|245|236|QQINNTITSI

>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QQINNTITSI 10
QQ+NN+I S+
Sbjct: 1039 QQLNNSILSV 1048


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QQINNTITS 9
+++NN ITS
Sbjct: 703 EKVNNNITS 711




49|SequenceR|250|241|EIEIIQQINN

>sp|MOAA_METTH|PROBABLE GTP 3',8-cyclase|Methanothermobacter thermautotrophicus (strain

Query: 2 IEIIQQINN 10
+EI+++INN
Sbjct: 75 VEIVERINN 83


>sp|PURA_THEAC|ADENYLOSUCCINATE synthetase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EIEIIQQIN 9
EIEI+++IN
Sbjct: 89 EIEIVRKIN 97


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 IEIIQQINN 10
+EII+++NN
Sbjct: 169 VEIIKEVNN 177


>sp|MOAA_METAR|PROBABLE GTP 3',8-cyclase|Methanocella arvoryzae (strain DSM 22066

Query: 1 EIEIIQQINN 10
E+EI++ I+N
Sbjct: 228 EVEIVRPIDN 237


>sp|TOP6A_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IEIIQQINN 10
+++I+QINN
Sbjct: 26 VKLIEQINN 34




50|SequenceR|255|246|TEFTDEIEII

>sp|GLYA_SACI6|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4

Query: 1 TEFTDEIEII 10
T++TDEIE +
Sbjct: 64 TKYTDEIETL 73


>sp|GLYA_SACI4|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25

Query: 1 TEFTDEIEII 10
T++TDEIE +
Sbjct: 64 TKYTDEIETL 73


>sp|GLYA_SACI3|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 1 TEFTDEIEII 10
T++TDEIE +
Sbjct: 64 TKYTDEIETL 73


>sp|GLYA_SACI1|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 1 TEFTDEIEII 10
T++TDEIE +
Sbjct: 64 TKYTDEIETL 73


>sp|GLYA_SACI7|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 1 TEFTDEIEII 10
T++TDEIE +
Sbjct: 64 TKYTDEIETL 73


>sp|GLYA_SACI2|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 1 TEFTDEIEII 10
T++TDEIE +
Sbjct: 64 TKYTDEIETL 73


>sp|GLYA_SACS2|SERINE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 TEFTDEIEII 10
T++TDEIE +
Sbjct: 64 TKYTDEIETL 73


>sp|PURP1_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 1|Methanosarcina mazei (strain ATCC

Query: 1 TEFTDEIEI 9
T FTDE+EI
Sbjct: 294 TVFTDELEI 302


>sp|KDPA_METB6|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Methanoregula boonei (strain DSM

Query: 1 TEFTDEIEII 10
T FTD +EI+
Sbjct: 260 TWFTDLVEIV 269


>sp|RIFK_METKA|RIBOFLAVIN kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 TEFTDEIEII 10
TE D++E+I
Sbjct: 97 TEHRDQVELI 106


>sp|KAE1_PYRAB|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus abyssi (strain

Query: 4 TDEIEII 10
TDE+EI+
Sbjct: 317 TDEVEIV 323


>sp|SMC_METVO|CHROMOSOME partition protein Smc|Methanococcus voltae

Query: 1 TEFTDEIEII 10
+E TDE EI+
Sbjct: 778 SELTDEKEIL 787


>sp|Y066_METJA|UNCHARACTERIZED protein MJ0066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EFTDEIE 8
EFTD+IE
Sbjct: 158 EFTDDIE 164




51|SequenceR|260|251|VAARLTEFTD

>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 1 VAARLTEF 8
+AARL+EF
Sbjct: 355 LAARLSEF 362


>sp|AATA_METMJ|A-TYPE ATP synthase subunit A|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VAARLTEF 8
+AARL+EF
Sbjct: 360 LAARLSEF 367


>sp|AATA_METB6|A-TYPE ATP synthase subunit A|Methanoregula boonei (strain DSM 21154

Query: 1 VAARLTEF 8
+AARL+EF
Sbjct: 363 LAARLSEF 370


>sp|AATA1_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VAARLTEF 8
+AARL+EF
Sbjct: 357 LAARLSEF 364


>sp|AATA_HALSA|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 700922

Query: 1 VAARLTEF 8
+AARL+EF
Sbjct: 361 LAARLSEF 368


>sp|AATA_HALS3|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 29341

Query: 1 VAARLTEF 8
+AARL+EF
Sbjct: 361 LAARLSEF 368


>sp|AATA_HALVD|A-TYPE ATP synthase subunit A|Haloferax volcanii (strain ATCC 29605

Query: 1 VAARLTEF 8
+AARL+EF
Sbjct: 364 LAARLSEF 371


>sp|AATA_NATPD|A-TYPE ATP synthase subunit A|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VAARLTEF 8
+AARL+EF
Sbjct: 363 LAARLSEF 370


>sp|SUFS_HALVD|CYSTEINE desulfurase|Haloferax volcanii (strain ATCC 29605

Query: 4 RLTEFTD 10
RLTEF D
Sbjct: 334 RLTEFDD 340




52|SequenceR|265|256|LGSAAVAARL

>sp|CDPAS_PYRCJ|CDP-ARCHAEOL synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GSAAVAARL 10
GSA +AARL
Sbjct: 19 GSAVLAARL 27




53|SequenceR|270|261|ELMTNLGSAA

>sp|RSAMH_PYRHO|(R)-S-ADENOSYL-L-METHIONINE hydrolase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ELMTNLGSAA 10
E+ N+GSAA
Sbjct: 231 EIAVNMGSAA 240


>sp|RL23_CALMQ|LARGE ribosomal subunit protein uL23|Caldivirga maquilingensis (strain

Query: 1 ELMTNLG 7
EL+TNLG
Sbjct: 78 ELLTNLG 84




54|SequenceR|275|266|YQGNGELMTN

>sp|RFRNP_STAMF|RNA-FREE ribonuclease P|Staphylothermus marinus (strain ATCC 43588

Query: 4 NGELMTN 10
NGEL+TN
Sbjct: 177 NGELVTN 183


>sp|VORA_METTM|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter marburgensis

Query: 1 YQGNGELMT 9
YQG+G+L +
Sbjct: 102 YQGDGDLAS 110


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YQGNGELMTN 10
Y GNG ++ N
Sbjct: 794 YLGNGTILAN 803


>sp|VORA_METTH|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter thermautotrophicus

Query: 1 YQGNGELMT 9
YQG+G+L +
Sbjct: 102 YQGDGDLAS 110


>sp|PFDA_PYRAR|PREFOLDIN subunit alpha|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 YQGNGELMTN 10
YQ GEL+TN
Sbjct: 17 YQLVGELLTN 26


>sp|Y1105_METKA|PUTATIVE nickel insertion protein|Methanopyrus kandleri (strain AV19 /

Query: 2 QGNGELMT 9
+G GEL+T
Sbjct: 184 EGEGELLT 191


>sp|GPMI_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YQGNGEL 7
Y GNGE+
Sbjct: 479 YTGNGEV 485




55|SequenceR|280|271|PALLTYQGNG

>sp|VORA_METTM|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter marburgensis

Query: 1 PALLTYQGNG 10
P +L YQG+G
Sbjct: 97 PVVLLYQGDG 106


>sp|Y1533_SACS2|PUTATIVE dioxygenase SSO1533|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PALLTYQGNG 10
P L TY NG
Sbjct: 201 PVLRTYDENG 210


>sp|SYS2_METTP|TYPE-2 serine--tRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 ALLTYQGN 9
ALL Y GN
Sbjct: 420 ALLPYSGN 427


>sp|PSB_METTH|PROTEASOME subunit beta|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 TYQGNG 10
TY GNG
Sbjct: 177 TYSGNG 182


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 6 YQGNG 10
YQGNG
Sbjct: 821 YQGNG 825


>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 6 YQGNG 10
YQGNG
Sbjct: 697 YQGNG 701


>sp|PSB_METVM|PROTEASOME subunit beta|Methanocaldococcus vulcanius (strain ATCC 700851

Query: 5 TYQGNG 10
TY GNG
Sbjct: 176 TYSGNG 181


>sp|PSB_METFA|PROTEASOME subunit beta|Methanocaldococcus fervens (strain DSM 4213

Query: 5 TYQGNG 10
TY GNG
Sbjct: 176 TYSGNG 181




56|SequenceR|285|276|FAENTPALLT

>sp|FUMC_SACS2|FUMARATE hydratase class II|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FAENTPALLT 10
+AE++P+L+T
Sbjct: 374 YAESSPSLIT 383


>sp|METK_HALSA|S-ADENOSYLMETHIONINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 FAENTPAL 8
+AE+TPA+
Sbjct: 194 YAEHTPAV 201


>sp|METK_HALS3|S-ADENOSYLMETHIONINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 FAENTPAL 8
+AE+TPA+
Sbjct: 194 YAEHTPAV 201


>sp|QUEE_METTH|7-CARBOXY-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 FAENTPALL 9
+A+NTP LL
Sbjct: 214 WAQNTPRLL 222


>sp|ACDG_METJA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanocaldococcus

Query: 3 ENTPALLT 10
EN+P +LT
Sbjct: 363 ENSPVILT 370


>sp|ACDG_METTH|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanothermobacter

Query: 3 ENTPALLT 10
EN+P +LT
Sbjct: 345 ENSPVILT 352


>sp|SECY_METTH|PROTEIN translocase subunit SecY|Methanothermobacter thermautotrophicus

Query: 1 FAENTPALLT 10
+A N P +LT
Sbjct: 273 YASNMPVILT 282




57|SequenceR|290|281|SPIKEFAENT

>sp|APGM_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SPIKEFAENT 10
+PI E+AEN+
Sbjct: 319 APILEYAENS 328


>sp|RNZ_METMP|RIBONUCLEASE Z|Methanococcus maripaludis (strain DSM 14266

Query: 2 PIKEFAE 8
P+KEFAE
Sbjct: 212 PLKEFAE 218


>sp|RS2_KORCO|SMALL ribosomal subunit protein uS2|Korarchaeum cryptofilum (strain OPF8)

Query: 2 PIKEFAENT 10
P+++FAE T
Sbjct: 93 PVRKFAEYT 101


>sp|CH60_METVS|CHAPERONIN GroEL|Methanococcus vannielii (strain ATCC 35089

Query: 1 SPIKEFAEN 9
+P+K+ AEN
Sbjct: 446 APLKQIAEN 454


>sp|RS2_METST|SMALL ribosomal subunit protein uS2|Methanosphaera stadtmanae (strain

Query: 1 SPIKEFAENT 10
SP+K+F E T
Sbjct: 77 SPVKKFGEVT 86


>sp|RS2_NANEQ|SMALL ribosomal subunit protein uS2|Nanoarchaeum equitans (strain

Query: 1 SPIKEFAENT 10
+PIK+F+E T
Sbjct: 76 TPIKKFSEIT 85


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PIKEFAENT 10
P++EF NT
Sbjct: 846 PLREFTANT 854


>sp|Y675_METJA|UNCHARACTERIZED protein MJ0675|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KEFAEN 9
KEFAEN
Sbjct: 96 KEFAEN 101


>sp|RL5_METLZ|LARGE ribosomal subunit protein uL5|Methanocorpusculum labreanum

Query: 2 PIKEFAENT 10
PI+ +A NT
Sbjct: 41 PIRSYARNT 49


>sp|Y990_METJA|PUTATIVE sulfur carrier protein MJ0990|Methanocaldococcus jannaschii

Query: 3 IKEFAEN 9
IK FAEN
Sbjct: 48 IKRFAEN 54


>sp|APGM_THEGJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus gammatolerans (strain DSM

Query: 2 PIKEFAENT 10
PIKEF T
Sbjct: 18 PIKEFGGKT 26


>sp|RS2_METVS|SMALL ribosomal subunit protein uS2|Methanococcus vannielii (strain

Query: 2 PIKEFAENT 10
P+K+F E T
Sbjct: 80 PLKKFGETT 88


>sp|RS2_METS3|SMALL ribosomal subunit protein uS2|Methanobrevibacter smithii (strain

Query: 1 SPIKEFAENT 10
+P+K+F E T
Sbjct: 77 APVKKFGEVT 86


>sp|APGM_THEKO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus kodakarensis (strain ATCC

Query: 2 PIKEFAENT 10
PIKEF T
Sbjct: 18 PIKEFGGKT 26


>sp|Y1673_METJA|UNCHARACTERIZED protein MJ1673|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PIKEFAE 8
PIKEF E
Sbjct: 56 PIKEFLE 62


>sp|Y426_METJA|UNCHARACTERIZED protein MJ0426|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KEFAEN 9
KEFAEN
Sbjct: 150 KEFAEN 155




58|SequenceR|295|286|RNLTESPIKE

>sp|T1SH_METJA|TYPE I restriction enzyme MjaIX|Methanocaldococcus jannaschii (strain

Query: 1 RNLTESPIKE 10
RN+TE +KE
Sbjct: 75 RNITEKAVKE 84


>sp|DTDA_METBF|D-AMINOACYL-TRNA deacylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RNLTESPI 8
+NL+E+PI
Sbjct: 15 KNLSETPI 22


>sp|ARLY_METAC|ARGININOSUCCINATE lyase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RNLTESPIKE 10
R LTE IKE
Sbjct: 418 RGLTEKMIKE 427




59|SequenceR|300|291|PDGLIRNLTE

>sp|HEM1_METMA|GLUTAMYL-TRNA reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DGLIRNL 8
DGL+RNL
Sbjct: 28 DGLLRNL 34


>sp|NDK_SULTO|NUCLEOSIDE diphosphate kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PDGLIRNL 8
PDG+ RNL
Sbjct: 12 PDGVRRNL 19


>sp|NDK_PICTO|NUCLEOSIDE diphosphate kinase|Picrophilus torridus (strain ATCC 700027

Query: 1 PDGLIRNL 8
PDG+ RNL
Sbjct: 10 PDGVERNL 17


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 DGLIRNLT 9
DG +RNLT
Sbjct: 1683 DGAVRNLT 1690


Query: 2 DGLIRNLT 9
DG I+NLT
Sbjct: 3791 DGTIQNLT 3798


>sp|DGGGP_METMJ|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 DGLIRNLT 9
+GL+RNL+
Sbjct: 151 EGLVRNLS 158


>sp|TDXH1_SULTO|PEROXIREDOXIN 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PDGLIR 6
PDG+IR
Sbjct: 128 PDGIIR 133


>sp|EF1B_IGNH4|ELONGATION factor 1-beta|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PDGLIRNLTE 10
PD + RNL E
Sbjct: 15 PDSVERNLEE 24


>sp|RFCL_METHJ|REPLICATION factor C large subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DGLIRNL 8
DG IRNL
Sbjct: 141 DGTIRNL 147


>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PDGLIRNLTE 10
P G+++NL +
Sbjct: 52 PQGIVKNLVK 61


>sp|PANB_CALMQ|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 PDGLIRNLTE 10
P GL R +TE
Sbjct: 186 PAGLAREVTE 195


>sp|SYFA_PYRFU|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PDGLIRNLTE 10
P+GL+ +TE
Sbjct: 120 PEGLVLEITE 129


>sp|UPP_HALSA|URACIL phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 PDGLIR 6
PDGL+R
Sbjct: 182 PDGLLR 187


>sp|UPP_HALS3|URACIL phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 PDGLIR 6
PDGL+R
Sbjct: 182 PDGLLR 187




60|SequenceR|305|296|DRLAEPDGLI

>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DRLAEPDGLI 10
DRL E DG++
Sbjct: 351 DRLREADGVV 360


>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DRLAEPDG 8
DRL PDG
Sbjct: 250 DRLIYPDG 257


>sp|ATGT_THEVO|TRNA-GUANINE(15) transglycosylase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DRLAEPDG 8
DRL PDG
Sbjct: 250 DRLIYPDG 257


>sp|TDXH1_SULTO|PEROXIREDOXIN 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LAEPDGLI 10
LA PDG+I
Sbjct: 125 LASPDGII 132


>sp|PYRG_NATPD|CTP synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DRLAEPDGLI 10
DRL+ DG+I
Sbjct: 350 DRLSRADGII 359


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 1 DRLAEPDGL 9
++ A PDGL
Sbjct: 539 EKFAHPDGL 547


>sp|GUAAA_METAC|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosarcina

Query: 5 EPDGLI 10
EPDGLI
Sbjct: 46 EPDGLI 51


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 1 DRLAEPD 7
DRL EPD
Sbjct: 538 DRLPEPD 544


>sp|GUAAA_METBF|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosarcina barkeri

Query: 5 EPDGLI 10
EPDGLI
Sbjct: 46 EPDGLI 51


>sp|GUAAA_METMA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosarcina mazei

Query: 5 EPDGLI 10
EPDGLI
Sbjct: 46 EPDGLI 51


>sp|KAD_METAR|ADENYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DRLAEPD 7
DRL++PD
Sbjct: 70 DRLSQPD 76


>sp|PSLS_METTH|PHOSPHOSULFOLACTATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DRLAEPD 7
DRL EPD
Sbjct: 147 DRLLEPD 153


>sp|KAD_METTP|ADENYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DRLAEPD 7
DRL++PD
Sbjct: 70 DRLSKPD 76


>sp|GUAAA_METBU|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcoides

Query: 5 EPDGLI 10
EPDG+I
Sbjct: 46 EPDGII 51




61|SequenceR|310|301|HNNLLDRLAE

>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 HNNLLDRLAE 10
+NNLLDRL +
Sbjct: 253 YNNLLDRLKQ 262


>sp|DCD_HALLT|DCTP deaminase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 NLLDRLAE 10
++LDRLAE
Sbjct: 7 DILDRLAE 14


>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui

Query: 4 LLDRLAE 10
LLDR+AE
Sbjct: 93 LLDRMAE 99


>sp|CMR3_SACS2|CRISPR system CMR subunit Cmr3|Saccharolobus solfataricus (strain ATCC

Query: 1 HNNLLDRLAE 10
+NNLLDR +
Sbjct: 283 NNNLLDRFTK 292


>sp|Y3016_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 HNNLLDRLAE 10
+ N+L RLAE
Sbjct: 274 YENILKRLAE 283


>sp|GATD_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Sulfolobus acidocaldarius (strain ATCC

Query: 1 HNNLLDRLAE 10
H N LDR+ E
Sbjct: 407 HENDLDRIKE 416


>sp|SYP_HALMA|PROLINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 HNNLLDRLA 9
HN L +RLA
Sbjct: 102 HNELEERLA 110




62|SequenceR|315|306|ASKLIHNNLL

>sp|Y1187_METJA|UNCHARACTERIZED protein MJ1187|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ASKLIHNN 8
ASK+ HNN
Sbjct: 149 ASKITHNN 156


>sp|RF12_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 2 SKLIHNNL 9
SKLI NN+
Sbjct: 59 SKLIRNNV 66


>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 KLIHNNL 9
K+IHN+L
Sbjct: 460 KIIHNDL 466




63|SequenceR|320|311|AEACMASKLI

>sp|PRIS_PYRNV|DNA primase small subunit PriS|Pyrobaculum neutrophilum (strain DSM

Query: 2 EACMASKLI 10
EAC SKL+
Sbjct: 97 EACRESKLV 105


>sp|PRIS_PYRIL|DNA primase small subunit PriS|Pyrobaculum islandicum (strain DSM 4184

Query: 2 EACMASKLI 10
EAC SKL+
Sbjct: 97 EACRESKLV 105


>sp|TRKA1_METMZ|TRK system potassium uptake protein|Methanosarcina mazei

Query: 3 ACMASKLI 10
ACM +KLI
Sbjct: 79 ACMTAKLI 86


>sp|TRKA1_METMA|TRK system potassium uptake protein|Methanosarcina mazei (strain ATCC

Query: 3 ACMASKLI 10
ACM +KLI
Sbjct: 79 ACMTAKLI 86


>sp|TRKA2_METMA|TRK system potassium uptake protein|Methanosarcina mazei (strain ATCC

Query: 3 ACMASKLI 10
ACM +KLI
Sbjct: 79 ACMTAKLI 86


>sp|PRIS_PYRAE|DNA primase small subunit PriS|Pyrobaculum aerophilum (strain ATCC

Query: 2 EACMASKLI 10
EAC SK++
Sbjct: 97 EACRESKIV 105




64|SequenceR|325|316|LGAVIAEACM

>sp|GPMI_NATPD|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LGAVIAEA 8
LGAV+AE+
Sbjct: 308 LGAVLAES 315




65|SequenceR|330|321|LTEVSLGAVI

***** No hits found ******


66|SequenceR|335|326|LTTGELTEVS

>sp|GCSH_THEVO|PROBABLE glycine cleavage system H|Thermoplasma volcanium (strain ATCC

Query: 3 TGELTEVS 10
TGE+TEV+
Sbjct: 74 TGEITEVN 81


>sp|Y677_METTH|UNCHARACTERIZED protein MTH_677|Methanothermobacter thermautotrophicus (strain

Query: 1 LTTGELTEVS 10
LT G+L E+S
Sbjct: 6 LTEGDLDEIS 15


>sp|RS28_NANEQ|SMALL ribosomal subunit protein eS28|Nanoarchaeum equitans (strain

Query: 2 TTGELTEV 9
TTGE+T+V
Sbjct: 37 TTGEVTQV 44




67|SequenceR|340|331|SCGVELTTGE

>sp|GCH3_METMP|GTP cyclohydrolase III|Methanococcus maripaludis (strain DSM 14266

Query: 1 SCGVELTTG 9
SCG+EL G
Sbjct: 207 SCGIELKAG 215


>sp|GCH3_METM5|GTP cyclohydrolase III|Methanococcus maripaludis (strain C5 /

Query: 1 SCGVELTTG 9
SCG+EL G
Sbjct: 207 SCGIELKAG 215


>sp|AOCD_METKA|ORNITHINE cyclodeaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 SCGVELTTGE 10
S GV+L TGE
Sbjct: 252 SLGVDLETGE 261


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SCGVELTTG 9
+C VEL TG
Sbjct: 337 NCDVELETG 345


>sp|THSB_AERPE|THERMOSOME subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 3 GVELTTGE 10
GV+L TGE
Sbjct: 486 GVDLDTGE 493


>sp|TPIS_HALSA|TRIOSEPHOSPHATE isomerase|Halobacterium salinarum (strain ATCC 700922

Query: 2 CGVELTTGE 10
CG +TTGE
Sbjct: 170 CGAGITTGE 178


>sp|TPIS_PYRAB|TRIOSEPHOSPHATE isomerase|Pyrococcus abyssi (strain GE5 /

Query: 2 CGVELTTGE 10
CG ++TGE
Sbjct: 180 CGAGISTGE 188


>sp|TPIS_PYRHO|TRIOSEPHOSPHATE isomerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 CGVELTTGE 10
CG ++TGE
Sbjct: 180 CGAGISTGE 188


>sp|TPIS_PYRWO|TRIOSEPHOSPHATE isomerase|Pyrococcus woesei

Query: 2 CGVELTTGE 10
CG ++TGE
Sbjct: 181 CGAGISTGE 189


>sp|TPIS_PYRFU|TRIOSEPHOSPHATE isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CGVELTTGE 10
CG ++TGE
Sbjct: 181 CGAGISTGE 189


>sp|AOCD_METJA|ORNITHINE cyclodeaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SCGVELTTGE 10
S GV+L TG+
Sbjct: 256 SLGVDLKTGK 265


>sp|GCSH_HALMA|PROBABLE glycine cleavage system H|Haloarcula marismortui (strain ATCC

Query: 3 GVELTTGE 10
G ELT GE
Sbjct: 49 GTELTAGE 56


>sp|RF1_AERPE|PEPTIDE chain release factor subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 CGVELTTGE 10
CG +++TG+
Sbjct: 97 CGEDMSTGK 105




68|SequenceR|345|336|TLMDGSCGVE

>sp|GVPE1_HALSA|TRANSCRIPTIONAL activator GvpE1|Halobacterium salinarum (strain ATCC 700922

Query: 1 TLMDGSCGVE 10
T+ DG+CG E
Sbjct: 93 TVRDGACGKE 102


>sp|MUTL_METTP|DNA mismatch repair protein MutL|Methanothrix thermoacetophila

Query: 2 LMDGSCGVE 10
L+D CG+E
Sbjct: 57 LVDDGCGIE 65


>sp|PIMT_METBU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 4 DGSCGV 9
DGSCG+
Sbjct: 125 DGSCGL 130


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 TLMDGSCGVE 10
+L DG+ GVE
Sbjct: 491 SLYDGNAGVE 500


>sp|PYRC_PYRHO|DIHYDROOROTASE horikoshii (strain ATCC 700860

Query: 2 LMDGSCGVE 10
++DGS G+E
Sbjct: 18 IIDGSIGIE 26


>sp|GVPE_HALMT|TRANSCRIPTIONAL activator GvpE|Haloferax mediterranei (strain ATCC 33500

Query: 2 LMDGSCGVE 10
+ DG+CG E
Sbjct: 94 IRDGACGKE 102


>sp|RS10_CENSY|SMALL ribosomal subunit protein uS10|Cenarchaeum symbiosum (strain A)

Query: 3 MDGSCGV 9
+DG CG+
Sbjct: 17 LDGVCGI 23


>sp|GPDA_METTH|GLYCEROL-3-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 1 TLMDGSC 7
TLMDGS
Sbjct: 61 TLMDGSV 67


>sp|HEM3_METKA|PROBABLE porphobilinogen deaminase|Methanopyrus kandleri (strain AV19 /

Query: 4 DGSCG 8
DGSCG
Sbjct: 267 DGSCG 271




69|SequenceR|350|341|AKGNITLMDG

>sp|SYFB_SULTO|PHENYLALANINE--TRNA ligase beta subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GNITLMDG 10
GNI+L+DG
Sbjct: 182 GNISLLDG 189


>sp|Y256_SACS2|UPF0215 protein SSO0256|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KGNITLMDG 10
KG+I ++DG
Sbjct: 58 KGDIVILDG 66


>sp|NURA_SACS2|DNA double-strand break repair nuclease|Saccharolobus solfataricus

Query: 1 AKGNITLMDG 10
+KG+ LMDG
Sbjct: 125 SKGDYILMDG 134


>sp|SPEH_SULAC|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Sulfolobus acidocaldarius (strain ATCC

Query: 2 KGNITLMD 9
+GN+TL+D
Sbjct: 43 EGNMTLLD 50


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 AKGNITLMDG 10
+KGN+ +DG
Sbjct: 975 SKGNLVALDG 984


>sp|Y960_SACI1|UPF0215 protein YN1551_0960|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 KGNITLMDG 10
KG+I ++DG
Sbjct: 58 KGDIVILDG 66


>sp|Y1993_SACI2|UPF0215 protein LS215_1993|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 KGNITLMDG 10
KG+I ++DG
Sbjct: 58 KGDIVILDG 66


>sp|Y1961_SACI3|UPF0215 protein M1627_1961|Saccharolobus islandicus (strain M.16.27)

Query: 2 KGNITLMDG 10
KG+I ++DG
Sbjct: 58 KGDIVILDG 66


>sp|Y1960_SACI7|UPF0215 protein YG5714_1960|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 KGNITLMDG 10
KG+I ++DG
Sbjct: 58 KGDIVILDG 66


>sp|Y1891_SACI6|UPF0215 protein M164_1891|Saccharolobus islandicus (strain M.16.4 /

Query: 2 KGNITLMDG 10
KG+I ++DG
Sbjct: 58 KGDIVILDG 66


>sp|Y1884_SACI4|UPF0215 protein M1425_1884|Saccharolobus islandicus (strain M.14.25 /

Query: 2 KGNITLMDG 10
KG+I ++DG
Sbjct: 58 KGDIVILDG 66


>sp|Y101_ARCFU|UNCHARACTERIZED protein AF_0101|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KGNITLMD 9
+GNI+L+D
Sbjct: 71 EGNISLLD 78


>sp|SYS_METLZ|SERINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 KGNITLMD 9
KGN+ L+D
Sbjct: 169 KGNLALLD 176


>sp|SYS_METHJ|SERINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 KGNITLMD 9
KGN+ L+D
Sbjct: 169 KGNLVLLD 176


>sp|SPEH_SULTO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GNITLMD 9
GN+TL+D
Sbjct: 44 GNMTLLD 50


>sp|SYFB_SULAC|PHENYLALANINE--TRNA ligase beta subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GNITLMDG 10
GNI++ DG
Sbjct: 182 GNISIYDG 189


>sp|SYS_METAR|SERINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 KGNITLMD 9
KGN+ L+D
Sbjct: 169 KGNMVLLD 176


>sp|CBIT_METTH|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 4 NITLMDG 10
N+TLM+G
Sbjct: 83 NVTLMEG 89


>sp|PFDA_THEAC|PREFOLDIN subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 AKGNITL 7
AKGNIT+
Sbjct: 61 AKGNITI 67


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 GNITLMDG 10
G++TL DG
Sbjct: 918 GSVTLSDG 925


>sp|Y1393_METJA|UNCHARACTERIZED protein MJ1393|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KGNITLMDG 10
+G+ITL DG
Sbjct: 215 EGSITLWDG 223




70|SequenceR|355|346|KNSIIAKGNI

>sp|MVHA_METFE|F420-NON-REDUCING hydrogenase subunit A|Methanothermus fervidus

Query: 1 KNSIIAKGNI 10
KN II K N+
Sbjct: 386 KNGIITKANL 395


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 NSIIAKGNI 10
N+I+ +GNI
Sbjct: 846 NAIVEQGNI 854


>sp|METE_THEVO|METHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KNSIIAKGNI 10
+N +IAK N+
Sbjct: 330 RNMVIAKNNV 339


>sp|RS4E_THEVO|SMALL ribosomal subunit protein eS4|Thermoplasma volcanium (strain ATCC

Query: 1 KNSIIAKGN 9
KN +IA GN
Sbjct: 121 KNKVIAPGN 129


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 IIAKGNI 10
+IAKGNI
Sbjct: 440 MIAKGNI 446




71|SequenceR|360|351|TALIDKNSII

>sp|MFNA_METAR|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanocella arvoryzae (strain

Query: 2 ALIDKNSI 9
ALIDKN+I
Sbjct: 152 ALIDKNTI 159


>sp|PURP_METTP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothrix thermoacetophila (strain

Query: 3 LIDKNSII 10
LID+N+II
Sbjct: 82 LIDENAII 89


>sp|MFNA_METB6|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoregula boonei (strain

Query: 3 LIDKNSI 9
LIDKN+I
Sbjct: 151 LIDKNTI 157


>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 4 IDKNSII 10
+DKNSII
Sbjct: 841 VDKNSII 847


>sp|MFNA_METBU|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcoides burtonii

Query: 2 ALIDKNSI 9
+LIDKN+I
Sbjct: 154 SLIDKNTI 161




72|SequenceR|365|356|HIVGNTALID

>sp|RL18_METAR|LARGE ribosomal subunit protein uL18|Methanocella arvoryzae (strain DSM

Query: 1 HIVGNTA 7
HI GNTA
Sbjct: 148 HIAGNTA 154


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 3 VGNTALID 10
VGN AL+D
Sbjct: 252 VGNIALVD 259


>sp|RRP4_KORCO|EXOSOME complex component Rrp4|Korarchaeum cryptofilum (strain OPF8)

Query: 2 IVGNTALID 10
I GNT L+D
Sbjct: 78 ISGNTILVD 86


>sp|WECB_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 HIVGNT 6
HIVGNT
Sbjct: 164 HIVGNT 169


>sp|RADA_METAC|DNA repair and recombination protein|Methanosarcina acetivorans (strain

Query: 1 HIVGNTA 7
HIVG+TA
Sbjct: 278 HIVGHTA 284


>sp|RADA_METMA|DNA repair and recombination protein|Methanosarcina mazei (strain ATCC

Query: 1 HIVGNTA 7
HIVG+TA
Sbjct: 278 HIVGHTA 284


>sp|RRP42_ARCFU|EXOSOME complex component Rrp42|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IVGNTALID 10
IVGN L+D
Sbjct: 191 IVGNKYLVD 199


>sp|ENDA_PICTO|TRNA-SPLICING endonuclease|Picrophilus torridus (strain ATCC 700027

Query: 1 HIVGNTALID 10
H++GN L++
Sbjct: 30 HVIGNVYLLN 39


>sp|RADA_METBF|DNA repair and recombination protein|Methanosarcina barkeri (strain

Query: 1 HIVGNTA 7
H+VG+TA
Sbjct: 278 HVVGHTA 284




73|SequenceR|370|361|LEDIYHIVGN

>sp|SYH_METHJ|HISTIDINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LEDIYHIVG 9
LED++ I+G
Sbjct: 215 LEDVFAIIG 223


>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 LEDIYHIVGN 10
L D Y++VG+
Sbjct: 420 LHDTYYVVGH 429


>sp|PYRG_HALSA|CTP synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LEDIYHI 7
+EDIYH+
Sbjct: 250 VEDIYHV 256


>sp|PYRG_HALS3|CTP synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LEDIYHI 7
+EDIYH+
Sbjct: 250 VEDIYHV 256


>sp|Y2352_ARCFU|UNCHARACTERIZED protein AF_2352|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DIYHIVGN 10
D YH+ GN
Sbjct: 47 DFYHLTGN 54


>sp|RSMA_THESM|PROBABLE ribosomal RNA small subunit|Thermococcus sibiricus (strain DSM

Query: 1 LEDIYHIVG 9
L+D YH++G
Sbjct: 220 LKDSYHMLG 228


>sp|GGGPS_SACS2|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EDIYHIVG 9
+DIY+I+G
Sbjct: 112 DDIYYIIG 119


>sp|PYRG_NATPD|CTP synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LEDIYHI 7
+EDIYH+
Sbjct: 251 VEDIYHV 257


>sp|Y355_PYRFU|VAPC ribonuclease PF0355|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LEDIYHIV 8
L+DIY+IV
Sbjct: 63 LKDIYNIV 70


>sp|AROE_HALSA|SHIKIMATE dehydrogenase (NADP(+))|Halobacterium salinarum (strain ATCC

Query: 3 DIYHIVGN 10
D+Y ++GN
Sbjct: 2 DVYGLIGN 9


>sp|AROE_HALS3|SHIKIMATE dehydrogenase (NADP(+))|Halobacterium salinarum (strain ATCC

Query: 3 DIYHIVGN 10
D+Y ++GN
Sbjct: 2 DVYGLIGN 9


>sp|PSB2_METS5|PROTEASOME subunit beta 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 LEDIYHIVGN 10
L+DIY VG+
Sbjct: 125 LDDIYAAVGS 134


>sp|Y214_PYRHO|UPF0056 membrane protein PH0214|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LEDIYHI 7
L+DI+HI
Sbjct: 63 LQDIFHI 69


>sp|AROE_HALLT|SHIKIMATE dehydrogenase (NADP(+))|Halorubrum lacusprofundi (strain ATCC

Query: 3 DIYHIVGN 10
D+Y ++GN
Sbjct: 2 DVYGLIGN 9


>sp|Y200_PYRAB|UPF0056 membrane protein PYRAB02000|Pyrococcus abyssi (strain GE5 /

Query: 1 LEDIYHI 7
L+DI+HI
Sbjct: 63 LQDIFHI 69


>sp|GGGPS_SULAC|GERANYLGERANYLGLYCERYL phosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EDIYHIVG 9
+D+Y+IVG
Sbjct: 105 DDLYYIVG 112


>sp|VAPC4_PYRHO|RIBONUCLEASE VapC4|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LEDIYHIV 8
L+DIY+IV
Sbjct: 63 LKDIYNIV 70


>sp|CAS8_THETK|CRISPR system associated protein Cas8|Thermoproteus tenax (strain ATCC

Query: 3 DIYHIV 8
D+YH++
Sbjct: 328 DVYHVI 333


>sp|AROE_NATPD|SHIKIMATE dehydrogenase (NADP(+))|Natronomonas pharaonis (strain ATCC 35678

Query: 3 DIYHIVGN 10
D+Y ++GN
Sbjct: 2 DVYGLIGN 9


>sp|GGGPS_SACI7|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 EDIYHIVG 9
+DIY+++G
Sbjct: 112 DDIYYVIG 119


>sp|GGGPS_SACI3|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.16.27)

Query: 2 EDIYHIVG 9
+DIY+++G
Sbjct: 112 DDIYYVIG 119


>sp|GGGPS_SACI2|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 EDIYHIVG 9
+DIY+++G
Sbjct: 112 DDIYYVIG 119


>sp|GGGPS_SACI1|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 EDIYHIVG 9
+DIY+++G
Sbjct: 112 DDIYYVIG 119


>sp|AROE_HALMA|SHIKIMATE dehydrogenase (NADP(+))|Haloarcula marismortui (strain ATCC 43049

Query: 3 DIYHIVGN 10
D+Y ++GN
Sbjct: 2 DVYGLIGN 9


>sp|GGGPS_SACI6|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 EDIYHIVG 9
+DIY+++G
Sbjct: 112 DDIYYVIG 119


>sp|GGGPS_SACI4|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 EDIYHIVG 9
+DIY+++G
Sbjct: 112 DDIYYVIG 119


>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LEDIYHI 7
++DIYH+
Sbjct: 252 VDDIYHV 258


>sp|HIS6_SULTO|IMIDAZOLE glycerol phosphate synthase subunit|Sulfurisphaera tokodaii

Query: 1 LEDIYHIVGN 10
+ED+ I+GN
Sbjct: 86 IEDVSRILGN 95


>sp|PRIS_METS3|DNA primase small subunit PriS|Methanobrevibacter smithii (strain ATCC

Query: 3 DIYHIVGN 10
+I H+VGN
Sbjct: 213 NIQHLVGN 220


>sp|Y175_METJA|UNCHARACTERIZED protein MJ0175|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DIYHIVGN 10
D YH+V N
Sbjct: 173 DYYHVVDN 180


>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 1 LEDIYHIVGN 10
+E IY VGN
Sbjct: 580 IEKIYRDVGN 589


>sp|ENO_METAC|ENOLASE acetivorans (strain ATCC 35395

Query: 3 DIYHIVG 9
+IYH++G
Sbjct: 195 EIYHVLG 201


>sp|AROE_HALWD|SHIKIMATE dehydrogenase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 3 DIYHIVGN 10
DIY ++GN
Sbjct: 2 DIYGLIGN 9


>sp|ENO_METBF|ENOLASE barkeri (strain Fusaro /

Query: 3 DIYHIVG 9
+IYH++G
Sbjct: 194 EIYHVLG 200


>sp|CDPAS_PYRAE|CDP-ARCHAEOL synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 IYHIVG 9
+YH++G
Sbjct: 71 VYHVIG 76




74|SequenceR|375|366|SDPILLEDIY

>sp|EF2_KORCO|ELONGATION factor 2|Korarchaeum cryptofilum (strain OPF8)

Query: 1 SDPILLEDIY 10
++P+LLE IY
Sbjct: 624 ANPVLLEPIY 633


>sp|PYRDB_THEAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermoplasma acidophilum

Query: 1 SDPILLEDI 9
SDP L+EDI
Sbjct: 140 SDPDLVEDI 148


>sp|PDXS_METJA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanocaldococcus jannaschii

Query: 1 SDPILLEDI 9
SDP L+E+I
Sbjct: 61 SDPALIEEI 69


>sp|PYRDB_THEVO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermoplasma volcanium (strain

Query: 1 SDPILLEDI 9
SDP L+EDI
Sbjct: 140 SDPDLVEDI 148


>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain ATCC

Query: 4 ILLEDIY 10
ILLED+Y
Sbjct: 121 ILLEDLY 127


>sp|VHOG_METMA|F420 non-reducing hydrogenase I small|Methanosarcina mazei (strain ATCC

Query: 4 ILLEDIY 10
ILLED+Y
Sbjct: 121 ILLEDLY 127


>sp|DNLI_METM6|DNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 SDPILLEDIY 10
S P+ LE+IY
Sbjct: 111 SQPLTLEEIY 120


>sp|MVK_AERPE|MEVALONATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 DPILLEDIY 10
DP+ ED+Y
Sbjct: 128 DPLSAEDLY 136


>sp|PUR7_PYRCJ|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 DPILLED 8
DP++LED
Sbjct: 128 DPLILED 134


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 2 DPILLEDI 9
+P+LLED+
Sbjct: 595 EPMLLEDV 602


>sp|AROC_ARCFU|CHORISMATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SDPILLED 8
+DPI+L+D
Sbjct: 260 NDPIVLKD 267


>sp|RL19E_ARCFU|LARGE ribosomal subunit protein eL19|Archaeoglobus fulgidus (strain

Query: 2 DPILLEDI 9
DP LEDI
Sbjct: 27 DPAALEDI 34


>sp|AROC_METBU|CHORISMATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 SDPILLED 8
+DP +LED
Sbjct: 263 NDPFILED 270


>sp|RPO1C_METS5|DNA-DIRECTED RNA polymerase subunit Rpo1C|Metallosphaera sedula (strain ATCC

Query: 2 DPILLED 8
DP+LL+D
Sbjct: 167 DPVLLKD 173


>sp|Y290_METJA|UNCHARACTERIZED protein MJ0290|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SDPILLEDIY 10
D +LLE+IY
Sbjct: 28 EDTLLLEEIY 37


>sp|HDLC_ARCPA|HETERODISULFIDE reductase subunit C-like protein|Archaeoglobus profundus (strain

Query: 1 SDPILLEDI 9
SDP LED+
Sbjct: 162 SDPKALEDL 170


>sp|DNLI_METM5|DNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 SDPILLEDIY 10
S P+ LE++Y
Sbjct: 111 SQPLTLEEMY 120


>sp|FTHS_HALMA|FORMATE--TETRAHYDROFOLATE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 DPILLEDI 9
DP+ +EDI
Sbjct: 222 DPVTVEDI 229


>sp|ARSM_METAC|ARSENITE methyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SDPILLEDI 9
SD +LLED+
Sbjct: 178 SDMVLLEDL 186


>sp|SELB_METJA|SELENOCYSTEINE-SPECIFIC elongation factor|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DPILLEDI 9
+PI+LE+I
Sbjct: 329 EPIILEEI 336




75|SequenceR|380|371|FLTKASDPIL

>sp|NNR_PYRAE|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Pyrobaculum aerophilum (strain

Query: 1 FLTKASDPI 9
FLTK SDP+
Sbjct: 446 FLTKTSDPL 454


>sp|FRHA_METVO|COENZYME F420 hydrogenase subunit alpha|Methanococcus voltae

Query: 2 LTKASDPIL 10
LT+A DPIL
Sbjct: 311 LTRAKDPIL 319


>sp|AMPPA_NATPD|AMP phosphorylase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LTKASDPI 9
LT+ SDPI
Sbjct: 315 LTRGSDPI 322


>sp|COFC_METPS|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocella paludicola (strain DSM 17711

Query: 1 FLTKASDPIL 10
FL+ AS+P++
Sbjct: 75 FLSSASEPVM 84




76|SequenceR|385|376|EAALEFLTKA

>sp|DNLI_METS3|DNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 EAALEFLTK 9
+A LE+LTK
Sbjct: 472 DATLEYLTK 480


>sp|PSA_PYRAE|PROTEASOME subunit alpha|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 LEFLTKA 10
+EFLTKA
Sbjct: 110 VEFLTKA 116




77|SequenceR|390|381|TSVDSEAALE

>sp|AATE_PYRIL|A-TYPE ATP synthase subunit E|Pyrobaculum islandicum (strain DSM 4184

Query: 1 TSVDSEAALE 10
T+++SE ALE
Sbjct: 46 TNIESEVALE 55


>sp|RS4E_HALLT|SMALL ribosomal subunit protein eS4|Halorubrum lacusprofundi (strain ATCC

Query: 1 TSVDSEAA 8
TSVD EAA
Sbjct: 107 TSVDEEAA 114




78|SequenceR|395|386|FLDIATSVDS

>sp|Y1212_ARCFU|UNCHARACTERIZED protein AF_1212|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FLDIATSVD 9
++D ATSVD
Sbjct: 78 YIDFATSVD 86


>sp|PGK2_METTH|2-PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LDIATSVDS 10
+D+ T++DS
Sbjct: 277 IDVVTTIDS 285


>sp|PGK2_METFV|2-PHOSPHOGLYCERATE kinase|Methanothermus fervidus (strain ATCC 43054

Query: 2 LDIATSVDS 10
+D+ T++DS
Sbjct: 277 IDVVTTIDS 285


>sp|MNTP_METTH|MANGANESE exporter MntP|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 LDIATSVDS 10
L IATS+D+
Sbjct: 106 LSIATSIDA 114


>sp|RIO1_THEAC|RIO-TYPE serine/threonine-protein kinase Rio1|Thermoplasma acidophilum

Query: 1 FLDIATSVD 9
F+D+A +VD
Sbjct: 138 FIDLAQAVD 146


>sp|Y833_METJA|UNCHARACTERIZED protein MJ0833|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FLDIATSV 8
FLD++TSV
Sbjct: 71 FLDVSTSV 78




79|SequenceR|400|391|LGAQRFLDIA

>sp|FTHS_METLZ|FORMATE--TETRAHYDROFOLATE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LGAQRFLDI 9
LGA++F DI
Sbjct: 310 LGAEKFFDI 318


>sp|FTHS_HALMA|FORMATE--TETRAHYDROFOLATE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LGAQRFLDI 9
LGA++F+D+
Sbjct: 296 LGAEKFMDV 304


>sp|FLAK_HALMA|PREFLAGELLIN peptidase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GAQRFLD 8
GA+RFLD
Sbjct: 272 GAERFLD 278




80|SequenceR|405|396|SLHNGLGAQR

>sp|Y1470_META3|UNCHARACTERIZED solute-binding protein Maeo_1470|Methanococcus aeolicus (strain

Query: 3 HNGLGAQR 10
HN +G QR
Sbjct: 66 HNNMGVQR 73


>sp|GLMS_METKA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanopyrus kandleri (strain AV19 /

Query: 1 SLHNGLGAQ 9
S H GLGA+
Sbjct: 306 SYHAGLGAK 314


>sp|CMR5_ARCFU|CRISPR system Cmr subunit Cmr5|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LHNGLGA 8
L+NGLGA
Sbjct: 47 LNNGLGA 53


>sp|RS19_METKA|SMALL ribosomal subunit protein uS19|Methanopyrus kandleri (strain AV19 /

Query: 3 HNGLGAQR 10
H G+GA R
Sbjct: 134 HGGIGATR 141


>sp|COBS_HALSA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Halobacterium salinarum (strain ATCC 700922

Query: 3 HNGLGAQ 9
H+GLG+Q
Sbjct: 112 HDGLGSQ 118




81|SequenceR|410|401|LRESGSLHNG

>sp|DMSB_HALSA|PUTATIVE dimethyl sulfoxide reductase iron-sulfur|Halobacterium salinarum

Query: 2 RESGSLHNG 10
R SGS+ NG
Sbjct: 238 RRSGSVENG 246


>sp|ATGT_META3|TRNA-GUANINE(15) transglycosylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LRESGSLH 8
L ESG+LH
Sbjct: 261 LTESGTLH 268


>sp|GSA_NITMS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 SGSLHNG 10
SGS HNG
Sbjct: 151 SGSAHNG 157


>sp|PRIS_METBF|DNA primase small subunit PriS|Methanosarcina barkeri (strain Fusaro /

Query: 1 LRESGSLHNG 10
+R GSLH G
Sbjct: 323 IRVPGSLHGG 332


>sp|RIFK_THEAC|RIBOFLAVIN kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LRESGSLHNG 10
LRE +LH+G
Sbjct: 202 LREEINLHDG 211


>sp|PRIS_METMA|DNA primase small subunit PriS|Methanosarcina mazei (strain ATCC

Query: 1 LRESGSLHNG 10
+R GSLH G
Sbjct: 323 IRVPGSLHGG 332


>sp|PRIS_METAC|DNA primase small subunit PriS|Methanosarcina acetivorans (strain ATCC

Query: 1 LRESGSLHNG 10
+R GSLH G
Sbjct: 323 IRVPGSLHGG 332


>sp|PRIS_METLZ|DNA primase small subunit PriS|Methanocorpusculum labreanum (strain

Query: 1 LRESGSLHNG 10
+R GSLH G
Sbjct: 295 IRHPGSLHGG 304


>sp|PRIS_METTH|DNA primase small subunit PriS|Methanothermobacter thermautotrophicus

Query: 1 LRESGSLHNG 10
+RE G HNG
Sbjct: 36 MREFGFDHNG 45


>sp|CISY_HALVD|CITRATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 4 SGSLHNG 10
SGSLH G
Sbjct: 221 SGSLHGG 227


>sp|PROB_METBU|GLUTAMATE 5-kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 RESGSLHN 9
RE GSL+N
Sbjct: 25 REDGSLNN 32


>sp|PRIS_HALSA|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 1 LRESGSLHNG 10
+R GSLH G
Sbjct: 305 IRLPGSLHGG 314


>sp|PRIS_HALS3|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 1 LRESGSLHNG 10
+R GSLH G
Sbjct: 305 IRLPGSLHGG 314


>sp|PRIS_HALWD|DNA primase small subunit PriS|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LRESGSLHNG 10
+R GSLH G
Sbjct: 299 IRLPGSLHGG 308


>sp|GLCDH_HALMA|GLUCOSE 1-dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 3 ESGSLHN 9
+ GSLHN
Sbjct: 280 DGGSLHN 286




82|SequenceR|415|406|PALLTLRESG

>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 PALLTLRES 9
PAL+TLR S
Sbjct: 142 PALMTLRNS 150


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 PALLTLRES 9
PAL+TLR S
Sbjct: 142 PALMTLRNS 150


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 PALLTLRES 9
PALLT+ ES
Sbjct: 649 PALLTIDES 657


>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 PALLTLRES 9
PAL+TLR +
Sbjct: 142 PALMTLRNN 150


>sp|NFI_HALMA|ENDONUCLEASE V|Haloarcula marismortui (strain ATCC 43049

Query: 1 PALLTLRESG 10
P LL+ RE G
Sbjct: 112 PGLLSFREGG 121


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 PALLTLRES 9
PAL+TLR +
Sbjct: 142 PALMTLRNN 150


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PALLTLRESG 10
P + TLRE+G
Sbjct: 853 PVVKTLREAG 862


>sp|Y665_METJA|UNCHARACTERIZED protein MJ0665|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LLTLRESG 10
LLT R+SG
Sbjct: 34 LLTFRDSG 41


>sp|G3PP_METKA|GLYCERALDEHYDE 3-phosphate phosphatase|Methanopyrus kandleri (strain AV19 /

Query: 1 PALLTLRESG 10
P L+ LRE G
Sbjct: 103 PTLMQLREMG 112


>sp|NFI_NATPD|ENDONUCLEASE V|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PALLTLRESG 10
P LL RE G
Sbjct: 90 PGLLAFREGG 99


>sp|PURL_HALMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloarcula marismortui (strain ATCC 43049

Query: 2 ALLTLRESG 10
ALL +RE+G
Sbjct: 427 ALLAIREAG 435




83|SequenceR|420|411|FVSNLPALLT

>sp|SECY_PYRHO|PROTEIN translocase subunit SecY|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FVSNLPALLT 10
+VSN+P +LT
Sbjct: 283 YVSNIPIILT 292


>sp|SECY_PYRFU|PROTEIN translocase subunit SecY|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FVSNLPALLT 10
+VSN+P +LT
Sbjct: 283 YVSNIPIILT 292


>sp|SECY_PYRAB|PROTEIN translocase subunit SecY|Pyrococcus abyssi (strain GE5 /

Query: 1 FVSNLPALLT 10
+VSN+P +LT
Sbjct: 283 YVSNIPIILT 292


>sp|SECY_METTH|PROTEIN translocase subunit SecY|Methanothermobacter thermautotrophicus

Query: 1 FVSNLPALLT 10
+ SN+P +LT
Sbjct: 273 YASNMPVILT 282


>sp|SECY_METVA|PROTEIN translocase subunit SecY|Methanococcus vannielii

Query: 1 FVSNLPALL 9
+VSNLP +L
Sbjct: 254 YVSNLPVIL 262


>sp|RSMA_PYRIL|PROBABLE ribosomal RNA small subunit|Pyrobaculum islandicum (strain DSM

Query: 1 FVSNLPALLT 10
FVSN+P +T
Sbjct: 90 FVSNIPYSIT 99


>sp|SECY_METJA|PROTEIN translocase subunit SecY|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FVSNLPALL 9
+VSN+P +L
Sbjct: 253 YVSNIPVIL 261




84|SequenceR|425|416|PTGDKFVSNL

>sp|PIMT_STAMF|PROTEIN-L-ISOASPARTATE O-methyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 1 PTGDKFVSNL 10
P GD+FV L
Sbjct: 184 PVGDRFVQRL 193


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 2 TGDKFVSNL 10
TG KFVSN+
Sbjct: 121 TGPKFVSNV 129


>sp|ILVD_META3|DIHYDROXY-ACID dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PTGDKFVSNL 10
P GD F+S+L
Sbjct: 306 PGGDHFISDL 315


>sp|Y3997_METAC|UPF0288 protein MA_3997|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PTGDKFVS 8
PTG+KF S
Sbjct: 481 PTGEKFSS 488


>sp|Y912_METMA|UPF0288 protein MM_0912|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PTGDKFVS 8
PTG+KF S
Sbjct: 481 PTGEKFSS 488


>sp|RSMA_METBF|PROBABLE ribosomal RNA small subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 PTGDKFVSNL 10
P DK VSNL
Sbjct: 109 PEFDKIVSNL 118


>sp|SYFB_NATPD|PHENYLALANINE--TRNA ligase beta subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PTGDKFV 7
P GD+FV
Sbjct: 169 PDGDRFV 175


>sp|XYLF_SULAC|XYLOSE/ARABINOSE-BINDING protein XylF|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 TGDKFVSN 9
TG KF++N
Sbjct: 363 TGSKFITN 370


>sp|Y3716_METBF|UPF0173 metal-dependent hydrolase Mbar_A3716|Methanosarcina barkeri (strain

Query: 1 PTGDKF 6
P GDKF
Sbjct: 165 PIGDKF 170




85|SequenceR|430|421|HADIPPTGDK

>sp|AATI_AERPE|A-TYPE ATP synthase subunit I|Aeropyrum pernix (strain ATCC 700893

Query: 1 HADIPPTGDK 10
H D PP G K
Sbjct: 33 HVDSPPQGVK 42


>sp|AMZA_NATPD|ARCHAEMETZINCIN pharaonis (strain ATCC 35678

Query: 1 HADIPPTGD 9
H DI P GD
Sbjct: 2 HVDIVPVGD 10


>sp|Y1398_METMP|UNCHARACTERIZED metallohydrolase MMP1398|Methanococcus maripaludis (strain DSM

Query: 1 HADIPPTGD 9
H DI P GD
Sbjct: 88 HMDIVPEGD 96


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 5 PPTGDK 10
PP+GDK
Sbjct: 705 PPSGDK 710


>sp|PURE_METTH|PROBABLE N5-carboxyaminoimidazole ribonucleotide mutase|Methanothermobacter

Query: 3 DIPPTGDK 10
++PP GDK
Sbjct: 173 EMPPIGDK 180


>sp|Y972_METJA|UPF0056 membrane protein MJ0972|Methanocaldococcus jannaschii (strain ATCC

Query: 1 HADIPPTGDK 10
HA+IP T K
Sbjct: 108 HAEIPKTKHK 117


>sp|PYRF_METM6|OROTIDINE 5'-phosphate decarboxylase|Methanococcus maripaludis (strain C6 /

Query: 2 ADIPPTGDK 10
ADIP T +K
Sbjct: 68 ADIPSTNEK 76


>sp|GCSH_THEAC|PROBABLE glycine cleavage system H|Thermoplasma acidophilum (strain ATCC

Query: 1 HADIPPTGDK 10
+ D+P GDK
Sbjct: 43 YVDLPKVGDK 52


>sp|PYRF_METMP|OROTIDINE 5'-phosphate decarboxylase|Methanococcus maripaludis (strain DSM

Query: 2 ADIPPTGDK 10
ADIP T +K
Sbjct: 68 ADIPSTNEK 76


>sp|AMZA_HALMA|ARCHAEMETZINCIN marismortui (strain ATCC 43049

Query: 1 HADIPPTGD 9
H DI P G+
Sbjct: 2 HVDIVPVGE 10


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 ADIPPTGD 9
D+PP G+
Sbjct: 561 GDLPPAGE 568


>sp|PYRF_METTH|OROTIDINE 5'-phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 2 ADIPPTGDK 10
ADIP T +K
Sbjct: 74 ADIPETNEK 82


>sp|Y1674_METJA|CRISPR-ASSOCIATED protein MJ1674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HADIPPTGD 9
HAD+ GD
Sbjct: 394 HADVSKKGD 402


>sp|RS2_THEPD|SMALL ribosomal subunit protein uS2|Thermofilum pendens (strain DSM 2475

Query: 2 ADIPPTGD 9
DIPP G+
Sbjct: 188 GDIPPNGE 195


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 ADIPPT 7
ADIPPT
Sbjct: 308 ADIPPT 313


>sp|PYRF_METJA|OROTIDINE 5'-phosphate decarboxylase|Methanocaldococcus jannaschii (strain

Query: 2 ADIPPTGDK 10
ADIP T +K
Sbjct: 63 ADIPATNEK 71


>sp|KHSE_METAR|HOMOSERINE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 HADIPPTG 8
H ++PP G
Sbjct: 152 HVELPPMG 159


>sp|GCSH_THEVO|PROBABLE glycine cleavage system H|Thermoplasma volcanium (strain ATCC

Query: 1 HADIPPTGDK 10
+ D+P GDK
Sbjct: 41 YVDLPEVGDK 50


>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 1 HADIPPTGD 9
ADIP GD
Sbjct: 312 RADIPIVGD 320


>sp|SYE_HALWD|GLUTAMATE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 ADIPPTGDK 10
AD+P GD+
Sbjct: 475 ADVPADGDR 483




86|SequenceR|435|426|LLNRTHADIP

>sp|SYP_THEVO|PROLINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 RTHADIP 10
R+HAD+P
Sbjct: 120 RSHADLP 126


>sp|SYP_THEAC|PROLINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 RTHADIP 10
R+HAD+P
Sbjct: 120 RSHADLP 126


>sp|SYP_PYRHO|PROLINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 RTHADIP 10
R+HAD+P
Sbjct: 123 RSHADLP 129


>sp|SYP_PYRFU|PROLINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 RTHADIP 10
R+HAD+P
Sbjct: 123 RSHADLP 129


>sp|SYP_PYRAB|PROLINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 RTHADIP 10
R+HAD+P
Sbjct: 123 RSHADLP 129


>sp|SYP_METKA|PROLINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 RTHADIP 10
R+HAD+P
Sbjct: 133 RSHADLP 139


>sp|SYP_METAR|PROLINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 4 RTHADIP 10
R+HAD+P
Sbjct: 125 RSHADLP 131


>sp|SYP_THEKO|PROLINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 RTHADIP 10
R+HAD+P
Sbjct: 124 RSHADLP 130


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 RTHADIP 10
R+HAD+P
Sbjct: 127 RSHADLP 133


>sp|SYP_METTP|PROLINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 RTHADIP 10
R+HAD+P
Sbjct: 128 RSHADLP 134


>sp|SYP_METHJ|PROLINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 RTHADIP 10
R+HAD+P
Sbjct: 125 RSHADLP 131


>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 4 RTHADIP 10
R+HAD+P
Sbjct: 125 RSHADLP 131


>sp|SYP_ARCFU|PROLINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 RTHADIP 10
R HAD+P
Sbjct: 120 RNHADLP 126


>sp|SYP_METAC|PROLINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 RTHADIP 10
R+HAD P
Sbjct: 128 RSHADFP 134


>sp|SYP_METBF|PROLINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 RTHADIP 10
R+HAD P
Sbjct: 128 RSHADFP 134


>sp|SYP_METMA|PROLINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 RTHADIP 10
R+HAD P
Sbjct: 128 RSHADFP 134


>sp|SYP_METLZ|PROLINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 RTHADIP 10
R+HAD+P
Sbjct: 125 RSHADLP 131


>sp|ARLY_METKA|ARGININOSUCCINATE lyase|Methanopyrus kandleri (strain AV19 /

Query: 2 LNRTHADIP 10
L R HA++P
Sbjct: 143 LAREHAEVP 151


>sp|LEUC_HALVD|3-ISOPROPYLMALATE dehydratase large subunit|Haloferax volcanii (strain ATCC 29605

Query: 3 NRTHADI 9
NRTHA +
Sbjct: 56 NRTHATV 62


>sp|GLMS_HALSA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Halobacterium salinarum (strain ATCC

Query: 2 LNRTHADIP 10
L THAD+P
Sbjct: 309 LLETHADLP 317


>sp|Y977_METKA|UNCHARACTERIZED glycosyltransferase MK0977|Methanopyrus kandleri (strain AV19 /

Query: 1 LLNRTHADIP 10
LL R H D+P
Sbjct: 54 LLLRRHPDLP 63


>sp|BGAL_HALLT|BETA-GALACTOSIDASE Bga|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 NRTHADI 9
NR HAD+
Sbjct: 223 NRLHADL 229




87|SequenceR|440|431|IIHNRLLNRT

>sp|GCSPA_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 IIHNRLLNR 9
+IH RLL R
Sbjct: 395 VIHERLLER 403


>sp|GCSPA_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 1 IIHNRLLNR 9
IIH+RLL +
Sbjct: 402 IIHSRLLEK 410


>sp|RL40_STAMF|LARGE ribosomal subunit protein eL40|Staphylothermus marinus (strain

Query: 1 IIHNRLLNR 9
I++NR+LN+
Sbjct: 11 IVYNRVLNK 19


>sp|GCSPA_SULAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfolobus

Query: 1 IIHNRLLNR 9
+IH+ LLN+
Sbjct: 402 LIHSSLLNK 410


>sp|DPO4_PICTO|DNA polymerase IV|Picrophilus torridus (strain ATCC 700027

Query: 2 IHNRLLNRT 10
I NR+LN T
Sbjct: 124 IKNRILNET 132




88|SequenceR|445|436|ALQDKIIHNR

>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QDKIIHNR 10
+D+IIH+R
Sbjct: 223 KDRIIHSR 230


>sp|SYDND_METVS|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ALQDKIIHN 9
A+ +K++HN
Sbjct: 250 AMLEKVVHN 258


>sp|URAD_HALJB|2-OXO-4-HYDROXY-4-CARBOXY-5-UREIDOIMIDAZOLINE decarboxylase|Halalkalicoccus jeotgali (strain DSM 18796

Query: 1 ALQDKIIHNR 10
A++D+I H+R
Sbjct: 133 AMEDRIDHSR 142




89|SequenceR|450|441|YLYKSALQDK

***** No hits found ******


90|SequenceR|455|446|LTQGHYLYKS

>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 2 TQGHYLY 8
T+GHYL+
Sbjct: 179 TRGHYLH 185


>sp|FAU1_PYRHO|PROBABLE ribonuclease FAU-1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 QGHYLYKS 10
+GH+ YKS
Sbjct: 269 EGHHQYKS 276


>sp|FAU1_PYRAB|PROBABLE ribonuclease FAU-1|Pyrococcus abyssi (strain GE5 /

Query: 3 QGHYLYKS 10
+GH+ YKS
Sbjct: 269 EGHHQYKS 276


>sp|THYX_HALSA|FLAVIN-DEPENDENT thymidylate synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LTQGHY 6
LT+GHY
Sbjct: 58 LTRGHY 63


>sp|TYW1_PYRAB|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 LTQGHYLYK 9
LT+G + YK
Sbjct: 52 LTEGRFCYK 60


>sp|TYW1_PYRHO|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus horikoshii (strain

Query: 1 LTQGHYLYK 9
LT+G + YK
Sbjct: 52 LTEGRFCYK 60


>sp|GVPL_HALMT|GAS vesicle protein L|Haloferax mediterranei (strain ATCC 33500

Query: 1 LTQGHYLY 8
+T G YLY
Sbjct: 35 VTDGRYLY 42


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LTQGHYLYK 9
+T+GH L+K
Sbjct: 974 VTRGHSLFK 982


>sp|HIS8_METST|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LTQGHYLYKS 10
+T+ YLY+S
Sbjct: 279 ITEREYLYES 288




91|SequenceR|460|451|GGLTELTQGH

>sp|FAEHP_METTP|BIFUNCTIONAL enzyme Fae/Hps|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GLTELTQGH 10
GLT+L+ GH
Sbjct: 36 GLTQLSAGH 44


>sp|FAEHP_METMA|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GLTELTQGH 10
GLT+L+ GH
Sbjct: 36 GLTQLSAGH 44


>sp|FAEHP_METAC|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GLTELTQGH 10
GLT+L+ GH
Sbjct: 36 GLTQLSAGH 44


>sp|FAEHP_METBF|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina barkeri (strain Fusaro /

Query: 2 GLTELTQGH 10
GLT+L+ GH
Sbjct: 36 GLTQLSVGH 44


>sp|FAEHP_METAR|BIFUNCTIONAL enzyme Fae/Hps|Methanocella arvoryzae (strain DSM 22066

Query: 2 GLTELTQGH 10
G+T+L+ GH
Sbjct: 36 GMTQLSMGH 44


>sp|FAEHP_METBU|BIFUNCTIONAL enzyme Fae/Hps|Methanococcoides burtonii (strain DSM 6242

Query: 2 GLTELTQGH 10
G+T+L+ GH
Sbjct: 36 GMTQLSAGH 44


>sp|FAU1_HALWD|PROBABLE ribonuclease FAU-1|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GGLTELTQGH 10
GGL L QGH
Sbjct: 192 GGLATLIQGH 201


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 4 TELTQGH 10
TEL QGH
Sbjct: 641 TELDQGH 647


>sp|FAEHP_METPE|BIFUNCTIONAL enzyme Fae/Hps|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 GLTELTQGH 10
GL++L+ GH
Sbjct: 36 GLSQLSAGH 44


>sp|FAEHP_METTH|BIFUNCTIONAL enzyme Fae/Hps|Methanothermobacter thermautotrophicus (strain

Query: 2 GLTELTQGH 10
GLT L+ GH
Sbjct: 36 GLTNLSLGH 44


>sp|Y3538_METJA|UNCHARACTERIZED protein MJECL38|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LTELTQG 9
LTEL+QG
Sbjct: 216 LTELSQG 222


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GGLTELTQGH 10
GG ELT H
Sbjct: 704 GGYIELTGNH 713


>sp|PYRG_CALMQ|CTP synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GGLTELTQGH 10
GG T+L GH
Sbjct: 65 GGETDLDLGH 74


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GGLTELTQGH 10
GG T+L GH
Sbjct: 65 GGETDLDLGH 74


>sp|PYRG_PYRCJ|CTP synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GGLTELTQGH 10
GG T+L GH
Sbjct: 65 GGETDLDLGH 74




92|SequenceR|465|456|VRLKKGGLTE

>sp|OTC_CENSY|ORNITHINE carbamoyltransferase|Cenarchaeum symbiosum (strain A)

Query: 1 VRLKKGG 7
+RLKKGG
Sbjct: 27 IRLKKGG 33


>sp|RS7_HALWD|SMALL ribosomal subunit protein uS7|Haloquadratum walsbyi (strain DSM

Query: 1 VRLKKGGLT 9
VRLK GG++
Sbjct: 149 VRLKYGGIS 157


>sp|RS7_METTP|SMALL ribosomal subunit protein uS7|Methanothrix thermoacetophila (strain

Query: 1 VRLKKGGLT 9
VRLK GG+T
Sbjct: 107 VRLKYGGIT 115


>sp|RS7_NATPD|SMALL ribosomal subunit protein uS7|Natronomonas pharaonis (strain ATCC

Query: 1 VRLKKGGLT 9
VRLK GG++
Sbjct: 125 VRLKYGGIS 133


>sp|RS7_HALSA|SMALL ribosomal subunit protein uS7|Halobacterium salinarum (strain ATCC

Query: 1 VRLKKGGLT 9
VRLK GG++
Sbjct: 132 VRLKYGGIS 140


>sp|RS7_HALS3|SMALL ribosomal subunit protein uS7|Halobacterium salinarum (strain ATCC

Query: 1 VRLKKGGLT 9
VRLK GG++
Sbjct: 132 VRLKYGGIS 140


>sp|RS7_HALMO|SMALL ribosomal subunit protein uS7|Halococcus morrhuae (Micrococcus

Query: 1 VRLKKGGLT 9
VRLK GG++
Sbjct: 125 VRLKYGGIS 133


>sp|RS7_HALMA|SMALL ribosomal subunit protein uS7|Haloarcula marismortui (strain ATCC

Query: 1 VRLKKGGLT 9
VRLK GG++
Sbjct: 128 VRLKYGGIS 136


>sp|ASSY_METBA|ARGININOSUCCINATE synthase|Methanosarcina barkeri

Query: 1 VRLKKGGLT 9
VRL KG LT
Sbjct: 339 VRLYKGALT 347


>sp|ASSY_METBF|ARGININOSUCCINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VRLKKGGLT 9
VRL KG LT
Sbjct: 338 VRLYKGALT 346


>sp|RS7_METBU|SMALL ribosomal subunit protein uS7|Methanococcoides burtonii (strain DSM

Query: 1 VRLKKGGLT 9
VRLK GG++
Sbjct: 108 VRLKYGGIS 116


>sp|RL18_KORCO|LARGE ribosomal subunit protein uL18|Korarchaeum cryptofilum (strain

Query: 1 VRLKKGGLTE 10
+R KK G+TE
Sbjct: 91 MRAKKAGVTE 100


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 VRLKKGGLT 9
VRLK+ GLT
Sbjct: 867 VRLKEVGLT 875


>sp|RS7_METMA|SMALL ribosomal subunit protein uS7|Methanosarcina mazei (strain ATCC

Query: 1 VRLKKGGLT 9
VRLK GG++
Sbjct: 111 VRLKYGGIS 119


>sp|DHQS_METBU|3-DEHYDROQUINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VRLKKGGLT 9
+RLK+ GLT
Sbjct: 92 IRLKEKGLT 100


>sp|RS7_METAC|SMALL ribosomal subunit protein uS7|Methanosarcina acetivorans (strain

Query: 1 VRLKKGGLT 9
VRLK GG++
Sbjct: 111 VRLKYGGIS 119


>sp|RNZ_SULAC|RIBONUCLEASE Z|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RLKKGGLTE 10
RLKK G+T+
Sbjct: 153 RLKKEGITD 161




93|SequenceR|470|461|NRYVFVRLKK

>sp|PELO_SACS2|PROTEIN pelota homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NRYVFVRLKK 10
N+YV RLK+
Sbjct: 111 NKYVLDRLKR 120


>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 NRYVFVR 7
NRY+FV+
Sbjct: 422 NRYMFVK 428


>sp|Y046_METJA|PUTATIVE methyltransferase MJ0046|Methanocaldococcus jannaschii (strain

Query: 1 NRYVFVR 7
NRY+F++
Sbjct: 66 NRYLFIK 72




94|SequenceR|475|466|EICLSNRYVF

>sp|END4_HALWD|PROBABLE endonuclease 4|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EICLSNRYVF 10
E+CL +VF
Sbjct: 168 EVCLDTAHVF 177


>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 LSNRYVF 10
L+NRY+F
Sbjct: 420 LANRYMF 426




95|SequenceR|480|471|AICSNEICLS

>sp|Y575_METJA|UNCHARACTERIZED protein MJ0575|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AICSNEICL 9
AIC E+CL
Sbjct: 107 AICPEEMCL 115


>sp|RNH2_HYPBU|RIBONUCLEASE HII|Hyperthermus butylicus (strain DSM 5456

Query: 1 AICSNEI 7
A+CSN+I
Sbjct: 30 AVCSNDI 36


>sp|GLMS_METMP|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanococcus maripaludis (strain

Query: 3 CSNEICLS 10
CS +IC++
Sbjct: 90 CSEKICIA 97




96|SequenceR|485|476|RKDHAAICSN

>sp|PRIL_METKA|DNA primase large subunit PriL|Methanopyrus kandleri (strain AV19 /

Query: 2 KDHAAICSN 10
+DHA CSN
Sbjct: 208 QDHARRCSN 216


>sp|APGM_THEAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 DHAAIC 8
DHA IC
Sbjct: 330 DHAVIC 335


>sp|GGR_METM5|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C5 /

Query: 1 RKDHAAICS 9
+K H ICS
Sbjct: 169 KKSHKEICS 177


>sp|TRPF_HALSA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Halobacterium salinarum (strain ATCC 700922

Query: 2 KDHAAICS 9
KDHAA+ +
Sbjct: 197 KDHAAVSA 204


>sp|TRPF_HALS3|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Halobacterium salinarum (strain ATCC 29341

Query: 2 KDHAAICS 9
KDHAA+ +
Sbjct: 197 KDHAAVSA 204




97|SequenceR|490|481|TGYRGRKDHA

>sp|RL14_KORCO|LARGE ribosomal subunit protein uL14|Korarchaeum cryptofilum (strain

Query: 2 GYRGRKDHA 10
GY+GRKD
Sbjct: 45 GYKGRKDRV 53


>sp|DUT_METMA|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanosarcina

Query: 2 GYRGRKD 8
GYRGR +
Sbjct: 120 GYRGRSE 126


>sp|DUT_METBF|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanosarcina

Query: 2 GYRGRKD 8
GYRGR +
Sbjct: 120 GYRGRSE 126


>sp|DUT_METAC|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanosarcina

Query: 2 GYRGRKD 8
GYRGR +
Sbjct: 120 GYRGRSE 126


>sp|Y541_ARCFU|UNCHARACTERIZED protein AF_0541|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GYRGRK 7
GYRGR+
Sbjct: 30 GYRGRE 35


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 TGYRGRKDH 9
TG+RGR ++
Sbjct: 1061 TGHRGRDEY 1069


>sp|DHYS2_ARCFU|PROBABLE deoxyhypusine synthase 2|Archaeoglobus fulgidus (strain ATCC

Query: 1 TGYRGRK 7
TG++GRK
Sbjct: 4 TGFQGRK 10


>sp|DHYS2_METAC|PROBABLE deoxyhypusine synthase 2|Methanosarcina acetivorans (strain ATCC

Query: 1 TGYRGRK 7
TG++GRK
Sbjct: 31 TGFQGRK 37


>sp|DHYS2_METMA|PROBABLE deoxyhypusine synthase 2|Methanosarcina mazei (strain ATCC

Query: 1 TGYRGRK 7
TG++GRK
Sbjct: 31 TGFQGRK 37


>sp|TOP6A_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 2 GYRGRKDH 9
GYRG+K +
Sbjct: 303 GYRGKKPY 310


>sp|RL14_NANEQ|LARGE ribosomal subunit protein uL14|Nanoarchaeum equitans (strain

Query: 2 GYRGRK 7
GY+GRK
Sbjct: 36 GYKGRK 41


>sp|TRPF_HALLT|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 GRKDH 9
GRKDH
Sbjct: 193 GRKDH 197


>sp|RL14_HALSA|LARGE ribosomal subunit protein uL14|Halobacterium salinarum (strain

Query: 2 GYRGRKDH 9
GY+GRK+
Sbjct: 36 GYQGRKNR 43


>sp|RL14_HALS3|LARGE ribosomal subunit protein uL14|Halobacterium salinarum (strain

Query: 2 GYRGRKDH 9
GY+GRK+
Sbjct: 36 GYQGRKNR 43




98|SequenceR|495|486|DMTFLTGYRG

>sp|Y504_ARCFU|UPF0282 protein AF_0504|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 MTFLTGYR 9
MT++ GYR
Sbjct: 199 MTYMLGYR 206


>sp|Y286_KORCO|UPF0282 protein Kcr_0286|Korarchaeum cryptofilum (strain OPF8)

Query: 2 MTFLTGYR 9
MT++ GYR
Sbjct: 199 MTYMLGYR 206


>sp|Y376_METTP|UPF0282 protein Mthe_0376|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 MTFLTGYR 9
MT++ GYR
Sbjct: 197 MTYMLGYR 204


>sp|ADEC_CENSY|ADENINE deaminase|Cenarchaeum symbiosum (strain A)

Query: 1 DMTFLTGYRG 10
DM + GYRG
Sbjct: 114 DMVGVAGYRG 123


>sp|SYFA_THEVO|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DMTFLTGYR 9
D +FL GY+
Sbjct: 471 DFSFLEGYK 479


>sp|K6PF_METJA|BIFUNCTIONAL ADP-specific glucokinase/phosphofructokinase|Methanocaldococcus

Query: 1 DMTFLTGYRG 10
D FL+GY+
Sbjct: 227 DCAFLSGYQA 236


>sp|NRPR_METJA|GLOBAL nitrogen regulator NrpR|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DMTFLTGYR 9
+ TFL G+R
Sbjct: 451 EKTFLAGFR 459


>sp|NIFK_METTM|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter marburgensis

Query: 5 LTGYRG 10
+TGYRG
Sbjct: 428 ITGYRG 433




99|SequenceR|500|491|PTLVRDMTFL

>sp|MTRC_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanocaldococcus jannaschii (strain

Query: 1 PTLVRDMTFL 10
P +VR MTFL
Sbjct: 133 PIMVRSMTFL 142


>sp|PYLB_METAC|3-METHYLORNITHINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PTLVRDMTFL 10
P +VR MTFL
Sbjct: 231 PDMVRVMTFL 240


>sp|PYLB_METBF|3-METHYLORNITHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PTLVRDMTFL 10
P +VR MTFL
Sbjct: 231 PDMVRVMTFL 240


>sp|GATE_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina mazei (strain ATCC

Query: 1 PTLVRDM 7
PTL+RD+
Sbjct: 32 PTLIRDI 38


>sp|GATE_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina acetivorans (strain

Query: 1 PTLVRDM 7
PTL+RD+
Sbjct: 32 PTLIRDI 38


>sp|GATE_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina barkeri (strain Fusaro

Query: 1 PTLVRDM 7
PTL+RD+
Sbjct: 32 PTLIRDV 38


>sp|RISB_PYRAR|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PTLVRDM 7
PTL+RD+
Sbjct: 47 PTLLRDL 53


>sp|KTHY_METBF|PROBABLE thymidylate kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 TLVRDMTFL 10
T+V D+TFL
Sbjct: 125 TIVPDLTFL 133


>sp|EF1A_ARCFU|ELONGATION factor 1-alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PTLVRDMT 8
PT+V+D T
Sbjct: 312 PTVVKDFT 319




100|SequenceR|505|496|VTGMPPTLVR

>sp|MPGP_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TGMPPTLV 9
TGMPP LV
Sbjct: 127 TGMPPELV 134


>sp|YB50_METTW|IRON-SULFUR cluster assembly SufBD family|Methanothermobacter

Query: 1 VTGMPPTL 8
+TG+PP L
Sbjct: 388 ITGLPPEL 395


>sp|Y1150_METTH|IRON-SULFUR cluster assembly SufBD family|Methanothermobacter

Query: 1 VTGMPPTL 8
+TG+PP L
Sbjct: 388 ITGLPPEL 395


>sp|CAPPA_PYRCJ|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 TGMPPTLV 9
TG+PPTL+
Sbjct: 359 TGLPPTLL 366


>sp|MOAA_PYRAE|PROBABLE GTP 3',8-cyclase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VTGMPPTLVR 10
+TG+PP+ R
Sbjct: 127 ITGVPPSAFR 136


>sp|RPO3_PYRAR|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum arsenaticum (strain DSM

Query: 1 VTGMPPTLV 9
V G+PP+LV
Sbjct: 18 VEGVPPSLV 26


>sp|RPO3_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum aerophilum (strain ATCC

Query: 1 VTGMPPTLV 9
V G+PP+LV
Sbjct: 18 VEGVPPSLV 26


>sp|RPO3_PYRCJ|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum calidifontis (strain DSM

Query: 1 VTGMPPTLV 9
V G+PP+L+
Sbjct: 18 VEGVPPSLI 26


>sp|TRUA_METMA|TRNA pseudouridine synthase A|Methanosarcina mazei (strain ATCC

Query: 2 TGMPPTL 8
+G+PPT+
Sbjct: 82 SGLPPTI 88


>sp|Y1029_THESM|UPF0282 protein TSIB_1029|Thermococcus sibiricus (strain DSM 12597

Query: 1 VTGMPPT 7
+TG PPT
Sbjct: 206 ITGGPPT 212


>sp|HEM1_METTM|GLUTAMYL-TRNA reductase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 VTGMPP 6
VTG+PP
Sbjct: 55 VTGVPP 60


>sp|FTHS_HALMA|FORMATE--TETRAHYDROFOLATE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VTGMPPT 7
VTGM PT
Sbjct: 50 VTGMTPT 56


>sp|TRUB_METAC|PROBABLE tRNA pseudouridine synthase B|Methanosarcina acetivorans (strain

Query: 3 GMPPTLVR 10
MPP LVR
Sbjct: 115 AMPPKLVR 122


>sp|AROA_METTH|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanothermobacter thermautotrophicus

Query: 1 VTGMPPTLVR 10
+ G+PP +VR
Sbjct: 140 MNGLPPIIVR 149


>sp|RL10_METVS|LARGE ribosomal subunit protein uL10|Methanococcus vannielii (strain ATCC

Query: 2 TGMPP 6
TGMPP
Sbjct: 134 TGMPP 138


>sp|AROA_KORCO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 VTGMPPTLVR 10
+ G+PP +VR
Sbjct: 139 MNGLPPLIVR 148


>sp|RL10_METMP|LARGE ribosomal subunit protein uL10|Methanococcus maripaludis (strain

Query: 2 TGMPP 6
TGMPP
Sbjct: 134 TGMPP 138


>sp|CDC6I_HALMA|ORC1-TYPE DNA replication protein 9|Haloarcula marismortui (strain ATCC

Query: 1 VTGMPPTLV 9
VTG PP V
Sbjct: 63 VTGSPPNSV 71


>sp|RL10_METVO|LARGE ribosomal subunit protein uL10|Methanococcus voltae

Query: 2 TGMPP 6
TGMPP
Sbjct: 134 TGMPP 138


>sp|RL10_METM7|LARGE ribosomal subunit protein uL10|Methanococcus maripaludis (strain C7

Query: 2 TGMPP 6
TGMPP
Sbjct: 134 TGMPP 138


>sp|RL10_METM6|LARGE ribosomal subunit protein uL10|Methanococcus maripaludis (strain C6

Query: 2 TGMPP 6
TGMPP
Sbjct: 134 TGMPP 138


>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 3 GMPPTLV 9
GMPP L+
Sbjct: 406 GMPPELI 412


>sp|RL10_METTL|LARGE ribosomal subunit protein uL10|Methanothermococcus

Query: 2 TGMPP 6
TGMPP
Sbjct: 134 TGMPP 138


>sp|FTHS_HALWD|FORMATE--TETRAHYDROFOLATE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VTGMPPT 7
VTGM PT
Sbjct: 77 VTGMTPT 83


>sp|CAPPA_PYRAR|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 GMPPTLV 9
G PPTL+
Sbjct: 361 GFPPTLI 367


>sp|RL10_META3|LARGE ribosomal subunit protein uL10|Methanococcus aeolicus (strain ATCC

Query: 2 TGMPP 6
TGMPP
Sbjct: 133 TGMPP 137


>sp|Y1363_THEON|UPF0282 protein TON_1363|Thermococcus onnurineus (strain NA1)

Query: 1 VTGMPPT 7
+TG PPT
Sbjct: 206 ITGGPPT 212


>sp|Y379_THEGJ|UPF0282 protein TGAM_0379|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VTGMPPT 7
+TG PPT
Sbjct: 206 ITGGPPT 212


>sp|Y1681_THEKO|UPF0282 protein TK1681|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VTGMPPT 7
+TG PPT
Sbjct: 206 ITGGPPT 212


>sp|RL10_METM5|LARGE ribosomal subunit protein uL10|Methanococcus maripaludis (strain C5

Query: 2 TGMPP 6
TGMPP
Sbjct: 134 TGMPP 138


>sp|CAPPA_PYRAE|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GMPPTLV 9
G+PPTL+
Sbjct: 361 GVPPTLL 367


>sp|AROC_AERPE|CHORISMATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VTGMPPTL 8
VTG+PP L
Sbjct: 28 VTGVPPGL 35


>sp|WTPC_PYRHO|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus horikoshii (strain

Query: 1 VTGMPP 6
+TG+PP
Sbjct: 64 ITGLPP 69


>sp|MER_ARCFU|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VTGMPPTLV 9
V G PPT++
Sbjct: 233 VAGSPPTVL 241


>sp|HPRT_METAC|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 TGMPPTLVR 10
TG+P T+VR
Sbjct: 75 TGIPLTIVR 83


>sp|HPRT_METMA|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC

Query: 2 TGMPPTLVR 10
TG+P T+VR
Sbjct: 75 TGIPLTIVR 83


>sp|HPRT_METBF|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 TGMPPTLVR 10
TG+P T+VR
Sbjct: 76 TGIPLTIVR 84


>sp|RL10_METJA|LARGE ribosomal subunit protein uL10|Methanocaldococcus jannaschii

Query: 2 TGMPP 6
TGMPP
Sbjct: 133 TGMPP 137




101|SequenceR|510|501|KLVDMVTGMP

>sp|PRIS_METLZ|DNA primase small subunit PriS|Methanocorpusculum labreanum (strain

Query: 1 KLVDMVTG 8
KL+DM+TG
Sbjct: 127 KLIDMLTG 134


>sp|MDH_PYRAE|MALATE dehydrogenase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LVDMVTGMP 10
L+D+V G+P
Sbjct: 29 LIDIVKGLP 37


>sp|MDH_PYRCJ|MALATE dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 LVDMVTGMP 10
L+D+V G+P
Sbjct: 29 LIDIVKGLP 37


>sp|FPOD_METMA|F(420)H(2) dehydrogenase subunit D|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LVDMVTG 8
L+DMVTG
Sbjct: 143 LIDMVTG 149


>sp|LYSX_SACS2|ALPHA-AMINOADIPATE--LYSW ligase LysX|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LVDMVTGMP 10
LVD V G+P
Sbjct: 240 LVDEVNGVP 248


>sp|PRIS_PYRIL|DNA primase small subunit PriS|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KLVDMVTG 8
KL+D++TG
Sbjct: 119 KLIDVLTG 126


>sp|MDH_THETK|MALATE dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 2 LVDMVTGMP 10
L+D++ G+P
Sbjct: 29 LIDIIKGLP 37


>sp|MDH_CALMQ|MALATE dehydrogenase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 LVDMVTGMP 10
L+D++ G+P
Sbjct: 29 LIDVIKGLP 37




102|SequenceR|515|506|FRNDGKLVDM

>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 2 RNDGKLVDM 10
R DGKL+D+
Sbjct: 628 REDGKLLDI 636


>sp|THSB_METTH|CHAPERONIN subunit beta|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 DGKLVDM 10
DGK+VDM
Sbjct: 475 DGKIVDM 481


>sp|RPO3_METTH|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanothermobacter

Query: 1 FRNDGKLVD 9
+RND K+ D
Sbjct: 47 YRNDAKMFD 55


>sp|THIC2_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 FRNDGKLVDM 10
F +DG +VDM
Sbjct: 130 FMSDGAVVDM 139


>sp|Y3004_HALWD|UPF0179 protein HQ_3004A|Haloquadratum walsbyi (strain DSM 16790

Query: 2 RNDGKLVD 9
R+DG+L+D
Sbjct: 51 RDDGQLLD 58


>sp|RL3_THEON|LARGE ribosomal subunit protein uL3|Thermococcus onnurineus (strain NA1)

Query: 3 NDGKLVDM 10
NDG++VD+
Sbjct: 136 NDGEIVDV 143


>sp|RL3_THEGJ|LARGE ribosomal subunit protein uL3|Thermococcus gammatolerans (strain

Query: 3 NDGKLVDM 10
NDG++VD+
Sbjct: 136 NDGEIVDV 143


>sp|KDPB_HALSA|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 2 RNDGKLVDM 10
++DGKLV M
Sbjct: 543 QDDGKLVGM 551


>sp|KDPB_HALS3|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 2 RNDGKLVDM 10
++DGKLV M
Sbjct: 543 QDDGKLVGM 551


>sp|SYT_THEGJ|THREONINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 RNDGKLVDM 10
R DGK V+M
Sbjct: 583 REDGKQVEM 591


>sp|DADD_METMP|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain DSM 14266

Query: 3 NDGKLVDM 10
NDGK+V++
Sbjct: 397 NDGKMVNI 404


>sp|NURA_PYRFU|DNA double-strand break repair nuclease|Pyrococcus furiosus (strain

Query: 1 FRNDGKLVD 9
FRN KL+D
Sbjct: 355 FRNIEKLID 363


>sp|DADD_METM6|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C6 /

Query: 3 NDGKLVDM 10
NDGK+V++
Sbjct: 397 NDGKMVNI 404


>sp|RPO1C_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma volcanium (strain ATCC

Query: 1 FRNDGKLVD 9
FR+ GK +D
Sbjct: 90 FRSSGKRID 98


>sp|FBPAP_IGNH4|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 FRNDGKL 7
FR DGK+
Sbjct: 207 FRKDGKI 213


>sp|SYW_METKA|TRYPTOPHAN--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 NDGKLVDM 10
NDGKLV +
Sbjct: 58 NDGKLVSV 65


>sp|SOXE_SULAC|SULFOCYANIN acidocaldarius (strain ATCC 33909

Query: 3 NDGKLVDM 10
+DGK++D+
Sbjct: 129 SDGKIIDI 136


>sp|ARFB_METV3|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus voltae (strain ATCC

Query: 3 NDGKLVD 9
N GKL+D
Sbjct: 9 NSGKLID 15




103|SequenceR|520|511|AVLMSFRNDG

>sp|OTC_METS3|ORNITHINE carbamoyltransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 LMSFRNDG 10
LMS NDG
Sbjct: 247 LMSLANDG 254




104|SequenceR|525|516|ASQIAAVLMS

***** No hits found ******


105|SequenceR|530|521|TETLGASQIA

***** No hits found ******


106|SequenceR|535|526|GERNLTETLG

>sp|T1SH_METJA|TYPE I restriction enzyme MjaIX|Methanocaldococcus jannaschii (strain

Query: 1 GERNLTE 7
GERN+TE
Sbjct: 73 GERNITE 79


>sp|Y1073_CALMQ|UPF0173 metal-dependent hydrolase Cmaq_1073|Caldivirga maquilingensis

Query: 3 RNLTETLG 10
RNLTE+L
Sbjct: 201 RNLTESLA 208


>sp|TFE_IGNH4|TRANSCRIPTION factor E|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GERNLTETLG 10
E LTETLG
Sbjct: 36 SEEQLTETLG 45


>sp|RL4_PYRFU|LARGE ribosomal subunit protein uL4|Pyrococcus furiosus (strain ATCC

Query: 1 GERNLTETLG 10
G+R +TE +G
Sbjct: 53 GKRRVTENIG 62


>sp|RL4_PYRAB|LARGE ribosomal subunit protein uL4|Pyrococcus abyssi (strain GE5 /

Query: 1 GERNLTETLG 10
G+R +TE +G
Sbjct: 53 GKRRVTENIG 62


>sp|RL4_THEGJ|LARGE ribosomal subunit protein uL4|Thermococcus gammatolerans (strain

Query: 1 GERNLTETLG 10
G+R +TE +G
Sbjct: 53 GKRRVTENIG 62


>sp|RL4_PYRHO|LARGE ribosomal subunit protein uL4|Pyrococcus horikoshii (strain ATCC

Query: 1 GERNLTETLG 10
G+R +TE +G
Sbjct: 53 GKRRVTENIG 62


>sp|RL4_THEKO|LARGE ribosomal subunit protein uL4|Thermococcus kodakarensis (strain

Query: 1 GERNLTETLG 10
G+R +TE +G
Sbjct: 53 GKRRVTENIG 62


>sp|RL4_THESM|LARGE ribosomal subunit protein uL4|Thermococcus sibiricus (strain DSM

Query: 1 GERNLTETLG 10
G+R +TE +G
Sbjct: 53 GKRRVTENIG 62




107|SequenceR|540|531|FVTYVGERNL

>sp|AATB_PYRCJ|A-TYPE ATP synthase subunit B|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 FVTYVGERNL 10
T VGERNL
Sbjct: 388 LATLVGERNL 397


>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 FVTYVGERNL 10
T VGERNL
Sbjct: 388 LATLVGERNL 397


>sp|AATB_PYRAR|A-TYPE ATP synthase subunit B|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 FVTYVGERNL 10
T VGERNL
Sbjct: 388 LATLVGERNL 397


>sp|AATB_PYRAE|A-TYPE ATP synthase subunit B|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FVTYVGERNL 10
T VGERNL
Sbjct: 388 LATLVGERNL 397


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FVTYVGERNL 10
T VGERNL
Sbjct: 388 LATLVGERNL 397


>sp|Y770_METJA|UNCHARACTERIZED protein MJ0770|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FVTYVGERNL 10
+VTY+GE +
Sbjct: 176 YVTYLGEHGI 185


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VTYVGERN 9
VTY G RN
Sbjct: 142 VTYFGSRN 149


>sp|COFH_ARCFU|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Archaeoglobus fulgidus (strain ATCC

Query: 2 VTYVGERNL 10
VTYV RN+
Sbjct: 39 VTYVVNRNI 47


>sp|COFH1_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina mazei (strain ATCC

Query: 2 VTYVGERNL 10
VTYV RN+
Sbjct: 50 VTYVVNRNI 58


>sp|COFH1_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina barkeri (strain

Query: 2 VTYVGERNL 10
VTYV RN+
Sbjct: 50 VTYVVNRNI 58


>sp|COFH1_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina acetivorans (strain

Query: 2 VTYVGERNL 10
VTYV RN+
Sbjct: 50 VTYVVNRNI 58


>sp|AATA_NATPD|A-TYPE ATP synthase subunit A|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VTYVGERNL 10
V YVGE L
Sbjct: 35 VVYVGEEGL 43


>sp|COFH_METJA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocaldococcus jannaschii (strain

Query: 2 VTYVGERNL 10
VTYV RN+
Sbjct: 45 VTYVVNRNI 53




108|SequenceR|545|536|ENTPAFVTYV

>sp|AAT_PYRAB|ASPARTATE aminotransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 TPAFVTY 9
TPAFV+Y
Sbjct: 118 TPAFVSY 124


>sp|Y009_METJA|UNCHARACTERIZED protein MJ0009|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ENTPAFVTY 9
ENTP F+ +
Sbjct: 5 ENTPNFIDF 13


>sp|FTHS_METLZ|FORMATE--TETRAHYDROFOLATE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 ENTPAFV 7
ENTP F+
Sbjct: 266 ENTPCFI 272


>sp|Y276_ARCFU|UPF0284 protein AF_0276|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TPAFVTY 9
TPA +TY
Sbjct: 78 TPALITY 84


>sp|FTHS_HALWD|FORMATE--TETRAHYDROFOLATE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ENTPAFV 7
E TPAFV
Sbjct: 279 EGTPAFV 285


>sp|NIFK_METMP|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 2 NTPAFVTY 9
NTP+FV +
Sbjct: 142 NTPSFVEH 149


>sp|NIFK_METMI|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 2 NTPAFVTY 9
NTP+FV +
Sbjct: 142 NTPSFVEH 149


>sp|PURA_HALMA|ADENYLOSUCCINATE synthetase|Haloarcula marismortui (strain ATCC 43049

Query: 1 ENTPAFVTYV 10
EN A+V Y+
Sbjct: 422 ENAKAYVEYI 431


>sp|Y584_METJA|UPF0718 protein MJ0584|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NTPAFVTY 9
NTP +++Y
Sbjct: 58 NTPKYISY 65




109|SequenceR|550|541|LARFAENTPA

>sp|RL30E_METST|LARGE ribosomal subunit protein eL30|Methanosphaera stadtmanae (strain

Query: 1 LARFAENTP 9
LA AENTP
Sbjct: 34 LAIMAENTP 42


>sp|KCY_METMJ|CYTIDYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LARFAENTPA 10
+FAEN P+
Sbjct: 49 FGKFAENDPS 58




110|SequenceR|555|546|RERPPLARFA

>sp|FPOO_METMA|F(420)H(2) dehydrogenase subunit O|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RERPPLARFA 10
R PPL RFA
Sbjct: 18 RTYPPLLRFA 27


>sp|EF1A_SACS2|ELONGATION factor 1-alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ERPPLARFA 10
E PPL RFA
Sbjct: 403 EFPPLGRFA 411


>sp|GRPE_METTP|PROTEIN GrpE|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 RERPPLARFA 10
RER LARFA
Sbjct: 71 REREELARFA 80


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RPPLARF 9
RPP+A+F
Sbjct: 722 RPPVAQF 728


>sp|EF1A_THEPD|ELONGATION factor 1-alpha|Thermofilum pendens (strain DSM 2475

Query: 2 ERPPLARFA 10
E PPL RFA
Sbjct: 403 EFPPLGRFA 411


>sp|FDHB_METFO|F420-DEPENDENT formate dehydrogenase subunit beta|Methanobacterium formicicum

Query: 2 ERPPLARF 9
E+PP+A F
Sbjct: 388 EKPPIAYF 395


>sp|NADE_ARCFU|NH(3)-DEPENDENT NAD(+) synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RERPPLAR 8
RE PP+AR
Sbjct: 235 REMPPVAR 242


>sp|EF1A_METS5|ELONGATION factor 1-alpha|Metallosphaera sedula (strain ATCC 51363

Query: 4 PPLARFA 10
PPL RFA
Sbjct: 405 PPLGRFA 411


>sp|PYRC_PYRAE|DIHYDROOROTASE aerophilum (strain ATCC 51768

Query: 2 ERPPLARFA 10
ERPP+A A
Sbjct: 170 ERPPIAELA 178


>sp|EF1A_PYRAR|ELONGATION factor 1-alpha|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 PPLARFA 10
PPL RFA
Sbjct: 414 PPLGRFA 420


>sp|SPSS_METMJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 ERPPLARF 9
++PP+A+F
Sbjct: 59 QKPPIAQF 66


>sp|EF1A_PYRAE|ELONGATION factor 1-alpha|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PPLARFA 10
PPL RFA
Sbjct: 414 PPLGRFA 420


>sp|EF1A_STAMF|ELONGATION factor 1-alpha|Staphylothermus marinus (strain ATCC 43588

Query: 4 PPLARFA 10
PPL RFA
Sbjct: 406 PPLGRFA 412


>sp|EF1A_PYRCJ|ELONGATION factor 1-alpha|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 PPLARFA 10
PPL RFA
Sbjct: 414 PPLGRFA 420


>sp|EF1A_ARCFU|ELONGATION factor 1-alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RERPPLARFA 10
++ PP+ RFA
Sbjct: 394 KDIPPMGRFA 403


>sp|PYRC_PYRFU|DIHYDROOROTASE furiosus (strain ATCC 43587

Query: 2 ERPPLA 7
ERPP+A
Sbjct: 176 ERPPIA 181


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 2 ERPPLARFA 10
E PPLAR
Sbjct: 331 EMPPLARLT 339




111|SequenceR|560|551|GLLRSRERPP

>sp|Y462_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 GLLRSRERPP 10
GL+R ++RPP
Sbjct: 128 GLIRLKDRPP 137


>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 1 GLLRSRERPP 10
G+ +RERPP
Sbjct: 323 GVASARERPP 332


>sp|PIP_THEVO|PROLINE iminopeptidase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LLRSRERPP 10
LLRS + PP
Sbjct: 184 LLRSEDWPP 192


>sp|PIP_THEAC|PROLINE iminopeptidase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LLRSRERPP 10
LLRS + PP
Sbjct: 182 LLRSEDWPP 190


>sp|Y394_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 GLLRSRERPP 10
GLL +++PP
Sbjct: 131 GLLELKDKPP 140


>sp|MPGS_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GLLRSRERPP 10
G+L+ E PP
Sbjct: 353 GILKEGEEPP 362


>sp|RL31_AERPE|LARGE ribosomal subunit protein eL31|Aeropyrum pernix (strain ATCC

Query: 4 RSRERPP 10
RSRE+PP
Sbjct: 58 RSREKPP 64


>sp|SYY_METAC|TYROSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GLLRSRERP 9
GLL+++E P
Sbjct: 22 GLLKNKEAP 30


>sp|RTCA_METKA|RNA 3'-terminal phosphate cyclase|Methanopyrus kandleri (strain AV19 /

Query: 1 GLLRSRERPP 10
G++R+R PP
Sbjct: 164 GIVRARMEPP 173


>sp|SPSS_METKA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 GLLRSRERPP 10
GLL E+PP
Sbjct: 52 GLLHEIEKPP 61


>sp|RS4_METMA|SMALL ribosomal subunit protein uS4|Methanosarcina mazei (strain ATCC

Query: 4 RSRERPP 10
++RERPP
Sbjct: 200 QARERPP 206




112|SequenceR|565|556|LEKADGLLRS

>sp|CCA_PYRAB|CCA-ADDING enzyme|Pyrococcus abyssi (strain GE5 /

Query: 1 LEKADGLLRS 10
LEKAD +LR
Sbjct: 197 LEKADFMLRQ 206


>sp|CCA_THEKO|CCA-ADDING enzyme|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LEKADGLLRS 10
LEKAD +LR
Sbjct: 198 LEKADFILRQ 207


>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EKADGLLRS 10
EKAD L+R+
Sbjct: 123 EKADSLIRN 131


>sp|CCA_THEGJ|CCA-ADDING enzyme|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LEKADGLLRS 10
+EKAD LLR
Sbjct: 198 VEKADFLLRQ 207


>sp|EF1A_CENSY|ELONGATION factor 1-alpha|Cenarchaeum symbiosum (strain A)

Query: 1 LEKADGLLRS 10
+EK +GL++S
Sbjct: 173 VEKGEGLVKS 182


>sp|RL5_PYRAE|LARGE ribosomal subunit protein uL5|Pyrobaculum aerophilum (strain ATCC

Query: 1 LEKADGLLR 9
LEKA GLL+
Sbjct: 36 LEKAAGLLK 44


>sp|PIMT_PYRFU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KADGLLRS 10
KA+G++RS
Sbjct: 19 KAEGIIRS 26


>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 2 EKADGLLRS 10
EK D LLR+
Sbjct: 122 EKTDSLLRN 130


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 2 EKADGLLRS 10
EK D LLR+
Sbjct: 122 EKTDSLLRN 130




113|SequenceR|570|561|KLINALEKAD

>sp|Y727_METTH|UPF0280 protein MTH_727|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 NALEKAD 10
NALE+AD
Sbjct: 208 NALERAD 214


>sp|Y1526_METJA|UPF0280 protein MJ1526|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NALEKAD 10
NALEKAD
Sbjct: 197 NALEKAD 203


>sp|Y1312_PYRHO|UPF0212 protein PH1312|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KLINALEK 8
K++NALEK
Sbjct: 30 KVVNALEK 37


>sp|RRP42_PYRFU|EXOSOME complex component Rrp42|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LINALEKAD 10
++NALEKA+
Sbjct: 265 ILNALEKAN 273


>sp|Y536_METFV|UPF0104 membrane protein Mfer_0536|Methanothermus fervidus (strain ATCC

Query: 1 KLINALEKAD 10
K++N + KAD
Sbjct: 28 KIVNDIRKAD 37


>sp|HPRT_METVM|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanocaldococcus vulcanius (strain ATCC

Query: 2 LINALEKA 9
+INALE+A
Sbjct: 132 IINALERA 139


>sp|XPD_SULAC|ATP-DEPENDENT DNA helicase XPD|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LINALEKAD 10
L+N+L KAD
Sbjct: 142 LLNSLYKAD 150




114|SequenceR|575|566|DGIHYKLINA

>sp|KADA_METTL|ADENYLATE kinase|Methanothermococcus thermolithotrophicus

Query: 1 DGIHYKLIN 9
+GI+YK++N
Sbjct: 30 EGINYKMVN 38


>sp|KADA_METIG|ADENYLATE kinase|Methanotorris igneus (Methanococcus igneus)

Query: 1 DGIHYKLIN 9
+GI YK++N
Sbjct: 30 EGIEYKMVN 38


>sp|KADA_METJA|ADENYLATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DGIHYKLIN 9
+GI YK++N
Sbjct: 30 EGIEYKIVN 38


>sp|ILVC_SACS2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 3 IHYKLIN 9
IHYKLI+
Sbjct: 115 IHYKLID 121


>sp|NADE_PYRFU|NH(3)-DEPENDENT NAD(+) synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GIHYKLIN 9
GI YK+IN
Sbjct: 75 GIRYKIIN 82


>sp|KADA_METMP|ADENYLATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DGIHYKLIN 9
+G++YK++N
Sbjct: 30 EGLNYKMVN 38


>sp|KADA_METM7|ADENYLATE kinase|Methanococcus maripaludis (strain C7 /

Query: 1 DGIHYKLIN 9
+G++YK++N
Sbjct: 30 EGLNYKMVN 38


>sp|KADA_METM6|ADENYLATE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 DGIHYKLIN 9
+G++YK++N
Sbjct: 30 EGLNYKMVN 38


>sp|ILVC_SACI7|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 3 IHYKLI 8
IHYKLI
Sbjct: 115 IHYKLI 120


>sp|ILVC_SACI6|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain M.16.4

Query: 3 IHYKLI 8
IHYKLI
Sbjct: 115 IHYKLI 120


>sp|ILVC_SACI4|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain M.14.25

Query: 3 IHYKLI 8
IHYKLI
Sbjct: 115 IHYKLI 120


>sp|ILVC_SACI3|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 3 IHYKLI 8
IHYKLI
Sbjct: 115 IHYKLI 120


>sp|ILVC_SACI2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 3 IHYKLI 8
IHYKLI
Sbjct: 115 IHYKLI 120


>sp|ILVC_SACI1|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 3 IHYKLI 8
IHYKLI
Sbjct: 115 IHYKLI 120


>sp|ILVC_PYRCJ|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum calidifontis (strain DSM

Query: 3 IHYKLI 8
IHYKLI
Sbjct: 112 IHYKLI 117


>sp|ILVC_SULTO|KETOL-ACID reductoisomerase (NADP(+))|Sulfurisphaera tokodaii (strain DSM

Query: 3 IHYKLI 8
IHYKLI
Sbjct: 112 IHYKLI 117


>sp|NADE_THESM|NH(3)-DEPENDENT NAD(+) synthetase|Thermococcus sibiricus (strain DSM 12597

Query: 2 GIHYKLIN 9
GI+YK+IN
Sbjct: 79 GINYKVIN 86


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DGIHY 5
DGIHY
Sbjct: 124 DGIHY 128


>sp|SEPS_METJA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DGIHYKLI 8
DGI YKL+
Sbjct: 471 DGIIYKLV 478


>sp|RL6_METM7|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 1 DGIHYKLI 8
DG YKL+
Sbjct: 84 DGFEYKLV 91


>sp|RL6_METMP|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 1 DGIHYKLI 8
DG YKL+
Sbjct: 84 DGFEYKLV 91


>sp|RL6_METM5|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 1 DGIHYKLI 8
DG YKL+
Sbjct: 84 DGFEYKLV 91


>sp|NADE_PYRAB|NH(3)-DEPENDENT NAD(+) synthetase|Pyrococcus abyssi (strain GE5 /

Query: 2 GIHYKLIN 9
GI Y++IN
Sbjct: 75 GIEYRVIN 82


>sp|Y811_METTH|UPF0305 protein MTH_811|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DGIHY 5
DG+HY
Sbjct: 125 DGVHY 129


>sp|RL6_METM6|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 1 DGIHYKLI 8
DG YKL+
Sbjct: 84 DGFEYKLV 91


>sp|Y851_PICTO|UPF0179 protein PTO0851|Picrophilus torridus (strain ATCC 700027

Query: 2 GIHYKLIN 9
G HY+++N
Sbjct: 43 GRHYRILN 50


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 1 DGIHYKL 7
DGIH+K+
Sbjct: 462 DGIHHKI 468


>sp|KADA_META3|ADENYLATE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DGIHYKLIN 9
+ I+YK++N
Sbjct: 30 ENINYKMVN 38




115|SequenceR|580|571|SVLIEDGIHY

>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 EDGIHY 10
EDGIHY
Sbjct: 123 EDGIHY 128


>sp|RL2_NANEQ|LARGE ribosomal subunit protein uL2|Nanoarchaeum equitans (strain

Query: 3 LIEDGIHY 10
LI+D IHY
Sbjct: 46 LIKDSIHY 53


>sp|Y738_METTH|UNCHARACTERIZED protein MTH_738|Methanothermobacter thermautotrophicus (strain

Query: 1 SVLIEDGIHY 10
SV+ ED +HY
Sbjct: 79 SVVNEDALHY 88


>sp|ENDA_PICTO|TRNA-SPLICING endonuclease|Picrophilus torridus (strain ATCC 700027

Query: 3 LIEDGIHY 10
+IEDG H+
Sbjct: 4 IIEDGFHF 11


>sp|MTAD_PYRFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VLIEDGI 8
VLIEDG+
Sbjct: 21 VLIEDGV 27


>sp|Y811_METTH|UPF0305 protein MTH_811|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 EDGIHY 10
+DG+HY
Sbjct: 124 KDGVHY 129


>sp|RL15_NATPD|LARGE ribosomal subunit protein uL15|Natronomonas pharaonis (strain

Query: 1 SVLIEDGI 8
+VL+EDGI
Sbjct: 74 AVLVEDGI 81


>sp|SIHH_METKA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanopyrus kandleri (strain AV19 /

Query: 1 SVLIEDGIH 9
+ L+E+G+H
Sbjct: 92 AALVEEGVH 100


>sp|TRPG_ARCFU|ANTHRANILATE synthase component 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SVLIEDGI 8
SVL EDG+
Sbjct: 158 SVLTEDGV 165


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 3 LIEDGIHY 10
LIED HY
Sbjct: 569 LIEDVTHY 576


>sp|NOB1_METJA|ENDORIBONUCLEASE Nob1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LIEDGIHY 10
+IE+G HY
Sbjct: 48 IIEEGEHY 55


>sp|RSAMH_PYRHO|(R)-S-ADENOSYL-L-METHIONINE hydrolase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LIEDGIH 9
LIE GIH
Sbjct: 138 LIEKGIH 144




116|SequenceR|585|576|AGIGGSVLIE

>sp|RS8_METST|SMALL ribosomal subunit protein uS8|Methanosphaera stadtmanae (strain

Query: 1 AGIGGSVLI 9
AGIGG +L+
Sbjct: 119 AGIGGRLLV 127


>sp|TIAS_IGNAA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignisphaera aggregans (strain

Query: 2 GIGGSVLI 9
G+GG+V+I
Sbjct: 302 GMGGTVII 309


>sp|HERA_SULAC|DNA double-strand break repair helicase|Sulfolobus acidocaldarius

Query: 3 IGGSVLI 9
IGGS+LI
Sbjct: 168 IGGSILI 174


>sp|PYRH_THESM|URIDYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 3 IGGSVLI 9
IGGSVL+
Sbjct: 7 IGGSVLV 13


>sp|PYRH_THEGJ|URIDYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 IGGSVLI 9
IGGSVL+
Sbjct: 7 IGGSVLV 13


>sp|HERA_SACS2|DNA double-strand break repair helicase|Saccharolobus solfataricus

Query: 3 IGGSVLI 9
+GGSVLI
Sbjct: 168 LGGSVLI 174


>sp|PYRH_THEKO|URIDYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 IGGSVLI 9
IGGSVL+
Sbjct: 7 IGGSVLV 13


>sp|G6PI_METJA|GLUCOSE-6-PHOSPHATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GIGGSVL 8
G+GGS+L
Sbjct: 68 GMGGSIL 74


>sp|RADA_METMA|DNA repair and recombination protein|Methanosarcina mazei (strain ATCC

Query: 2 GIGGSVLI 9
G+GGSV+I
Sbjct: 132 GLGGSVII 139


>sp|PYRH_THEON|URIDYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 3 IGGSVLI 9
IGGSVL+
Sbjct: 7 IGGSVLV 13


>sp|Y1354_METJA|UNCHARACTERIZED protein MJ1354|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GIGGSVLI 9
GIGG +LI
Sbjct: 20 GIGGHILI 27


>sp|CH60_METVS|CHAPERONIN GroEL|Methanococcus vannielii (strain ATCC 35089

Query: 4 GGSVLIE 10
GG+VLIE
Sbjct: 413 GGTVLIE 419




117|SequenceR|590|581|KLRVLAGIGG

>sp|GATE_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfurisphaera tokodaii (strain DSM

Query: 2 LRVLAGIGG 10
+R LAG+GG
Sbjct: 339 VRALAGLGG 347


>sp|GATE_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus solfataricus (strain ATCC

Query: 2 LRVLAGIGG 10
+R LAG+GG
Sbjct: 339 VRALAGLGG 347


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 4 VLAGIGG 10
++AGIGG
Sbjct: 86 IIAGIGG 92


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 4 VLAGIGG 10
++AGIGG
Sbjct: 86 IIAGIGG 92


>sp|RIBL_THEON|FAD synthase|Thermococcus onnurineus (strain NA1)

Query: 1 KLRVLAG 7
K+RVLAG
Sbjct: 8 KIRVLAG 14


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 4 VLAGIGG 10
++AGIGG
Sbjct: 86 IIAGIGG 92


>sp|Y1023_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 LRVLAGI 8
LR+LAGI
Sbjct: 47 LRILAGI 53


>sp|MTD_METVS|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 2 LRVLAGIGG 10
+RVLAG G
Sbjct: 140 IRVLAGTGA 148


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 4 VLAGIGG 10
++AGIGG
Sbjct: 86 IIAGIGG 92


>sp|MTD_META3|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 2 LRVLAGIGG 10
+RVLAG G
Sbjct: 141 IRVLAGTGA 149


>sp|MTD_METM5|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 2 LRVLAGIGG 10
+RVLAG G
Sbjct: 141 IRVLAGTGA 149


>sp|MTD_METJA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanocaldococcus

Query: 2 LRVLAGIGG 10
+RVLAG G
Sbjct: 141 IRVLAGTGA 149


>sp|GATE_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanocaldococcus jannaschii (strain

Query: 3 RVLAGIGG 10
+V+AG+GG
Sbjct: 337 KVIAGVGG 344


>sp|MTD_METMP|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 2 LRVLAGIGG 10
+RVLAG G
Sbjct: 141 IRVLAGTGA 149


>sp|MTD_METM7|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 2 LRVLAGIGG 10
+RVLAG G
Sbjct: 141 IRVLAGTGA 149




118|SequenceR|595|586|DGQLSKLRVL

>sp|Y120_METTH|PUTATIVE NADH dehydrogenase/NAD(P)H nitroreductase|Methanothermobacter

Query: 1 DGQLSKLRVL 10
DG++SK+ VL
Sbjct: 17 DGKVSKMDVL 26


>sp|PUR2_METAR|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DGQLSKLRV 9
DG L KL++
Sbjct: 317 DGSLDKLKI 325


>sp|KAE1B_METHJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 DGQLSKLRV 9
DG SK+RV
Sbjct: 345 DGAASKIRV 353




119|SequenceR|600|591|SVELKDGQLS

>sp|RPO3_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus solfataricus (strain ATCC

Query: 3 ELKDGQLS 10
ELKDG+LS
Sbjct: 189 ELKDGKLS 196


>sp|RPO3_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 3 ELKDGQLS 10
ELKDG+LS
Sbjct: 189 ELKDGKLS 196


>sp|RPO3_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain M.16.4

Query: 3 ELKDGQLS 10
ELKDG+LS
Sbjct: 189 ELKDGKLS 196


>sp|RPO3_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 3 ELKDGQLS 10
ELKDG+LS
Sbjct: 189 ELKDGKLS 196


>sp|RPO3_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 3 ELKDGQLS 10
ELKDG+LS
Sbjct: 189 ELKDGKLS 196


>sp|RPO3_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 3 ELKDGQLS 10
ELKDG+LS
Sbjct: 189 ELKDGKLS 196


>sp|RPO3_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 3 ELKDGQLS 10
ELKDG+LS
Sbjct: 189 ELKDGKLS 196


>sp|RPO3_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus shibatae (strain ATCC

Query: 3 ELKDGQLS 10
ELKDG+LS
Sbjct: 189 ELKDGKLS 196


>sp|Y452_PYRFU|UPF0216 protein PF0452|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SVELKDGQL 9
S+EL+DG L
Sbjct: 36 SIELRDGSL 44


>sp|PURO_METJA|IMP cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VELKDGQ 8
VELKDG+
Sbjct: 135 VELKDGK 141


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 KDGQLS 10
KDGQLS
Sbjct: 858 KDGQLS 863


>sp|FLPA_AERPE|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Aeropyrum pernix (strain ATCC

Query: 2 VELKDGQL 9
VEL+DG L
Sbjct: 19 VELEDGSL 26


>sp|PYRG_METJA|CTP synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VELKDGQLS 10
VELKD LS
Sbjct: 300 VELKDAYLS 308


>sp|TRPD_METAC|ANTHRANILATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 3 ELKDGQLS 10
ELKDG++S
Sbjct: 238 ELKDGEVS 245


>sp|DCDA_METJA|DIAMINOPIMELATE decarboxylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SVELKDGQL 9
+VE+KDG+
Sbjct: 10 TVEIKDGRF 18


>sp|TRPD_METBF|ANTHRANILATE phosphoribosyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 3 ELKDGQLS 10
ELKDG++S
Sbjct: 235 ELKDGKVS 242


>sp|DPHB_THEVO|DIPHTHINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VELKDGQ 8
++LKDGQ
Sbjct: 163 IDLKDGQ 169


>sp|SYFB_PYRAB|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 SVELKDGQ 8
SVEL+DG+
Sbjct: 313 SVELEDGK 320


>sp|PUR1_METJA|AMIDOPHOSPHORIBOSYLTRANSFERASE jannaschii (strain ATCC 43067

Query: 2 VELKDGQL 9
+E+KDG++
Sbjct: 219 IEIKDGEI 226


>sp|MALK_THELN|TREHALOSE/MALTOSE import ATP-binding protein MalK|Thermococcus litoralis (strain

Query: 1 SVELKDGQL 9
S+E+KDG+
Sbjct: 23 SLEVKDGEF 31


>sp|Y2082_ARCFU|UNCHARACTERIZED protein AF_2082|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ELKDGQL 9
ELKDG+L
Sbjct: 27 ELKDGKL 33




120|SequenceR|605|596|VNNKLSVELK

>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VNNKLSVEL 9
VNNKLSV L
Sbjct: 645 VNNKLSVNL 653


>sp|Y181_METJA|UNCHARACTERIZED protein MJ0181|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VNNKLSVELK 10
+ N+LS+ELK
Sbjct: 196 IANELSIELK 205


>sp|RPO11_METMA|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanosarcina mazei (strain ATCC

Query: 2 NNKLSVELK 10
NN+L VEL+
Sbjct: 10 NNELEVELR 18


>sp|Y2151_THEKO|PUTATIVE transcriptional regulatory protein TK2151|Thermococcus

Query: 1 VNNKLSVELK 10
+N+K+SVE+K
Sbjct: 60 INSKISVEVK 69




121|SequenceR|610|601|KNVSVVNNKL

>sp|ENDA_THEVO|TRNA-SPLICING endonuclease|Thermoplasma volcanium (strain ATCC 51530

Query: 3 VSVVNNKL 10
VSVV NKL
Sbjct: 243 VSVVENKL 250


>sp|IF2G_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 KNVSVVNNKL 10
KN+ +V NK+
Sbjct: 142 KNIVIVQNKV 151


>sp|IF2G_METMA|TRANSLATION initiation factor 2 subunit|Methanosarcina mazei (strain ATCC

Query: 1 KNVSVVNNKL 10
KN+ +V NK+
Sbjct: 159 KNIVIVQNKI 168


>sp|IF2G_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 KNVSVVNNKL 10
KN+ +V NK+
Sbjct: 171 KNIVIVQNKI 180


>sp|IDI2_SULTO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KNVSVVNNKL 10
KN+S+ N K+
Sbjct: 2 KNISITNRKI 11


>sp|IF2G_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 1 KNVSVVNNKL 10
KN+ +V NK+
Sbjct: 137 KNIVIVQNKI 146




122|SequenceR|615|606|EAVPEKNVSV

>sp|FEN_META3|FLAP endonuclease 1|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EAVPEKNVSV 10
+++P+KN+S+
Sbjct: 7 DSIPKKNISI 16


>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 VPEKNVSV 10
+P+KNV +
Sbjct: 142 IPDKNVDI 149


>sp|SYFA_THEVO|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 2 AVPEKNVSV 10
AV +KNVSV
Sbjct: 370 AVYDKNVSV 378




123|SequenceR|620|611|AMIDPEAVPE

>sp|RL18_THEPD|LARGE ribosomal subunit protein uL18|Thermofilum pendens (strain DSM 2475

Query: 1 AMIDPEAVPE 10
A +DPE++PE
Sbjct: 173 AGLDPESLPE 182


>sp|RIFK_THEVO|RIBOFLAVIN kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 IDPEAVPE 10
+DP ++PE
Sbjct: 136 VDPSSIPE 143


>sp|NADA_PYRHO|QUINOLINATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 MIDPEAVPE 10
MI PE +PE
Sbjct: 194 MIHPECIPE 202


>sp|TSR3_THEAC|16S rRNA aminocarboxypropyltransferase|Thermoplasma acidophilum (strain

Query: 4 DPEAVPE 10
DPE +PE
Sbjct: 151 DPEKIPE 157


>sp|NADA_PYRAB|QUINOLINATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 MIDPEAVPE 10
M+ PE +PE
Sbjct: 194 MVHPECIPE 202


>sp|ARGB_METB6|ACETYLGLUTAMATE kinase|Methanoregula boonei (strain DSM 21154

Query: 1 AMIDPEAV 8
AM+DPE +
Sbjct: 31 AMVDPEVL 38


>sp|RL18_PYRHO|LARGE ribosomal subunit protein uL18|Pyrococcus horikoshii (strain ATCC

Query: 3 IDPEAVPE 10
+DPE +PE
Sbjct: 176 LDPEKLPE 183


>sp|RL18_PYRFU|LARGE ribosomal subunit protein uL18|Pyrococcus furiosus (strain ATCC

Query: 3 IDPEAVPE 10
+DPE +PE
Sbjct: 176 LDPEKLPE 183


>sp|NADE_STAMF|NH(3)-DEPENDENT NAD(+) synthetase|Staphylothermus marinus (strain ATCC 43588

Query: 3 IDPEAVPE 10
I+PE VPE
Sbjct: 227 IEPEKVPE 234


>sp|RL18_PYRAB|LARGE ribosomal subunit protein uL18|Pyrococcus abyssi (strain GE5 /

Query: 3 IDPEAVPE 10
+DPE +PE
Sbjct: 176 LDPEKLPE 183


>sp|HIS6_METB6|IMIDAZOLE glycerol phosphate synthase subunit|Methanoregula boonei (strain

Query: 3 IDPEAVP 9
++PEAVP
Sbjct: 138 LNPEAVP 144


>sp|Y3946_HALS3|PUTATIVE HTH-type transcriptional regulatory protein|Halobacterium salinarum

Query: 4 DPEAVPE 10
DPEA PE
Sbjct: 204 DPEAAPE 210


>sp|Y2112_HALSA|PUTATIVE HTH-type transcriptional regulatory protein|Halobacterium salinarum

Query: 4 DPEAVPE 10
DPEA PE
Sbjct: 204 DPEAAPE 210


>sp|HELS_AERPE|ATP-DEPENDENT DNA helicase Hel308|Aeropyrum pernix (strain ATCC 700893

Query: 3 IDPEAVP 9
+DPE+VP
Sbjct: 499 LDPESVP 505


>sp|FTSZ1_ARCFU|CELL division protein FtsZ 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AMIDPE 6
AMIDPE
Sbjct: 326 AMIDPE 331


>sp|RL14_THEKO|LARGE ribosomal subunit protein uL14|Thermococcus kodakarensis (strain

Query: 1 AMIDPEAVPE 10
A++ PE VP
Sbjct: 105 AIVTPEGVPR 114


>sp|THYX_HALMA|FLAVIN-DEPENDENT thymidylate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 IDPEAVPE 10
+DPEAV E
Sbjct: 107 VDPEAVRE 114


>sp|REG6_PYRHO|HTH-TYPE transcriptional regulator FL11|Pyrococcus horikoshii (strain ATCC

Query: 1 AMIDPEAV 8
A+IDPEA+
Sbjct: 56 AIIDPEAL 63


>sp|LONB_HALSA|ARCHAEAL Lon protease|Halobacterium salinarum (strain ATCC 700922

Query: 1 AMIDPEAVP 9
AM+ EAVP
Sbjct: 329 AMVQTEAVP 337


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 AMIDPEAVP 9
A+ DP AVP
Sbjct: 984 AVADPVAVP 992


>sp|FTSZ2_PYRFU|CELL division protein FtsZ 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AMIDPE 6
AM+DPE
Sbjct: 325 AMVDPE 330


>sp|TRM1_METB6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoregula boonei

Query: 4 DPEAVP 9
DPEA+P
Sbjct: 84 DPEAIP 89




124|SequenceR|625|616|VVGNTAMIDP

>sp|PURO_HALMA|IMP cyclohydrolase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VVGNTAMIDP 10
VVGN + +DP
Sbjct: 64 VVGNGSHVDP 73


>sp|PURO_HALSA|IMP cyclohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VVGNTAMIDP 10
VVGN + +DP
Sbjct: 64 VVGNGSHVDP 73


>sp|PURO_HALS3|IMP cyclohydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VVGNTAMIDP 10
VVGN + +DP
Sbjct: 64 VVGNGSHVDP 73


>sp|PURO_NATPD|IMP cyclohydrolase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VVGNTAMIDP 10
VVGN +DP
Sbjct: 65 VVGNGTQVDP 74


>sp|PURA_PICTO|ADENYLOSUCCINATE synthetase|Picrophilus torridus (strain ATCC 700027

Query: 1 VVGNTAMIDP 10
V+GN +IDP
Sbjct: 65 VLGNGMVIDP 74


>sp|PURO_HALWD|IMP cyclohydrolase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VVGNTAMIDP 10
V+GN + +DP
Sbjct: 64 VIGNGSHVDP 73


>sp|SYFA_THEAC|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 NTAMID 9
NTAMID
Sbjct: 152 NTAMID 157


>sp|PURO_HALLT|IMP cyclohydrolase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 VVGNTAMIDP 10
VVGN + +DP
Sbjct: 69 VVGNGSHVDP 78


>sp|RL6_METMP|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain DSM

Query: 3 GNTAMID 9
GNT MID
Sbjct: 105 GNTVMID 111


>sp|RL6_METM6|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain C6

Query: 3 GNTAMID 9
GNT MID
Sbjct: 105 GNTVMID 111


>sp|DCD_PYRFU|DCTP deaminase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VVGNTAMIDP 10
V+G+ A +DP
Sbjct: 87 VIGSFAWVDP 96


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 2 VGNTAMIDP 10
VGN ++DP
Sbjct: 756 VGNLTVVDP 764


>sp|RRP42_ARCFU|EXOSOME complex component Rrp42|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VVGNTAMIDP 10
+VGN ++DP
Sbjct: 191 IVGNKYLVDP 200


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 VGNTAMID 9
VGN A++D
Sbjct: 252 VGNIALVD 259


>sp|RRP42_THEKO|EXOSOME complex component Rrp42|Thermococcus kodakarensis (strain ATCC

Query: 2 VGNTAMIDP 10
+GN+ ++DP
Sbjct: 201 IGNSIVVDP 209


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 1 VVGNTAMIDP 10
++G T IDP
Sbjct: 487 IIGRTCGIDP 496


>sp|RNH2_METB6|RIBONUCLEASE HII|Methanoregula boonei (strain DSM 21154

Query: 2 VGNTAMID 9
VG+T MID
Sbjct: 24 VGSTEMID 31




125|SequenceR|630|621|NTIVHVVGNT

>sp|MTBA_METAC|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina acetivorans (strain ATCC

Query: 2 TIVHVVGNT 10
T++H+ GNT
Sbjct: 236 TVLHICGNT 244


>sp|MTBA_METBA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina barkeri

Query: 2 TIVHVVGNT 10
T++H+ GNT
Sbjct: 236 TVLHICGNT 244


>sp|MTBA_METMA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TIVHVVGNT 10
T++H+ GNT
Sbjct: 236 TVLHICGNT 244


>sp|DTDA_THEGJ|D-AMINOACYL-TRNA deacylase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 TIVHVVGN 9
TIVHV+ N
Sbjct: 174 TIVHVLEN 181


>sp|WECB_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase|Methanococcus maripaludis (strain DSM 14266

Query: 4 VHVVGNT 10
+H+VGNT
Sbjct: 163 IHIVGNT 169


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 NTIVHVVGNT 10
N+IVH++ +
Sbjct: 553 NSIVHIINGS 562


>sp|GLMS_METMP|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanococcus maripaludis (strain

Query: 2 TIVHVVGNT 10
TIV+V+G+T
Sbjct: 370 TIVNVLGST 378




126|SequenceR|635|626|PPQLVNTIVH

>sp|IPYR_METAC|INORGANIC pyrophosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PPQLVNTIVH 10
PP L+ IVH
Sbjct: 119 PPHLLKEIVH 128


>sp|DNLJ_HALWD|DNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 QLVNTIVH 10
QLV TIVH
Sbjct: 504 QLVRTIVH 511


>sp|GGR_METB6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoregula boonei (strain DSM 21154

Query: 1 PPQLVNTIVH 10
P + +NTI+H
Sbjct: 351 PDEKLNTIIH 360


>sp|RPO3_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum aerophilum (strain ATCC

Query: 1 PPQLVNTI 8
PP LVN++
Sbjct: 22 PPSLVNSL 29


>sp|RPO3_PYRAR|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum arsenaticum (strain DSM

Query: 1 PPQLVNTI 8
PP LVN++
Sbjct: 22 PPSLVNSL 29


>sp|DPCKG_NITMS|GTP-DEPENDENT dephospho-CoA kinase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PPQLVNT 7
PP+LVNT
Sbjct: 63 PPKLVNT 69


>sp|PDXT_PYRIL|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum islandicum (strain

Query: 2 PQLVNTIVH 10
P+L T+VH
Sbjct: 185 PELSTTVVH 193


>sp|RF1_PYRAE|PEPTIDE chain release factor subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 PPQLVNT 7
PPQ +NT
Sbjct: 118 PPQPINT 124


>sp|G6PI_METMP|PROBABLE glucose-6-phosphate isomerase|Methanococcus maripaludis (strain DSM

Query: 2 PQLVNTIVH 10
P L+N ++H
Sbjct: 239 PALMNAVIH 247


>sp|RPO3_PYRCJ|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum calidifontis (strain DSM

Query: 1 PPQLVNTI 8
PP L+N++
Sbjct: 22 PPSLINSL 29


>sp|RL4_METST|LARGE ribosomal subunit protein uL4|Methanosphaera stadtmanae (strain

Query: 1 PPQLVNTIVH 10
PP+ VNTI H
Sbjct: 94 PPR-VNTIYH 102


>sp|IPYR_METMA|INORGANIC pyrophosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PPQLVNTIVH 10
PP L+ I H
Sbjct: 116 PPHLLKEITH 125


>sp|Y3551_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 PQLVNTI 8
P+LVNT+
Sbjct: 266 PELVNTL 272


>sp|RNZ_META3|RIBONUCLEASE Z|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PPQLVNTI 8
PP++ NTI
Sbjct: 90 PPEIKNTI 97


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPQLVNTIV 9
PP +V T+V
Sbjct: 90 PPLIVGTVV 98




127|SequenceR|640|631|QPRNAPPQLV

>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 QPRNAPPQLV 10
QPRN PP ++
Sbjct: 311 QPRNTPPHVL 320


>sp|GLT_PYRHO|SODIUM-ASPARTATE symporter Glt(Ph)|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QPRNAPP 7
QP+ APP
Sbjct: 123 QPKQAPP 129


>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 PRNAPPQ 8
PRN PP+
Sbjct: 75 PRNVPPE 81


>sp|Y089_SULAC|MEMO1 family protein Saci_0089|Sulfolobus acidocaldarius (strain ATCC

Query: 2 PRNAPPQ 8
P+N PPQ
Sbjct: 40 PQNKPPQ 46


>sp|PYRC_HALSA|DIHYDROOROTASE salinarum (strain ATCC 700922

Query: 1 QPRNAPPQL 9
QP APP +
Sbjct: 85 QPNTAPPTV 93


>sp|Y011_PYRAR|PROTEIN Pars_0011|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PRNAPPQLV 10
P N PP+L+
Sbjct: 33 PENPPPRLI 41


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 3 RNAPPQLV 10
R+ PPQL+
Sbjct: 489 RSVPPQLI 496


>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PRNAPPQ 8
P+N PP+
Sbjct: 75 PKNVPPE 81


>sp|TDH_PYRFU|L-THREONINE 3-dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PRNAPPQ 8
P+N PP+
Sbjct: 140 PKNIPPE 146


>sp|RL2_THEPD|LARGE ribosomal subunit protein uL2|Thermofilum pendens (strain DSM 2475

Query: 2 PRNAPP 7
PRNAPP
Sbjct: 219 PRNAPP 224




128|SequenceR|645|636|EDGREQPRNA

>sp|AATA_METB6|A-TYPE ATP synthase subunit A|Methanoregula boonei (strain DSM 21154

Query: 1 EDGREQP 7
EDGRE P
Sbjct: 185 EDGREYP 191


>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 DGREQPR 8
+G+EQPR
Sbjct: 194 EGKEQPR 200


>sp|SYC_SULTO|CYSTEINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EDGREQPRNA 10
ED EQ +NA
Sbjct: 304 EDSLEQAKNA 313


>sp|KITH_THEKO|THYMIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DGREQPRNA 10
DG+ PRN+
Sbjct: 165 DGKPAPRNS 173


>sp|AATB_PYRCJ|A-TYPE ATP synthase subunit B|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 DGREQPRN 9
DG+ QPR+
Sbjct: 94 DGKGQPRD 101


>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 DGREQPRN 9
DG+ QPR+
Sbjct: 94 DGKGQPRD 101


>sp|AATB_PYRAR|A-TYPE ATP synthase subunit B|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 DGREQPRN 9
DG+ QPR+
Sbjct: 94 DGKGQPRD 101


>sp|AATB_PYRAE|A-TYPE ATP synthase subunit B|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DGREQPRN 9
DG+ QPR+
Sbjct: 94 DGKGQPRD 101


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DGREQPRN 9
DG+ QPR+
Sbjct: 94 DGKGQPRD 101


>sp|YGY3_HALL2|UNCHARACTERIZED 50.6 kDa protein in|Haloferax lucentense (strain DSM 14919

Query: 4 REQPRNA 10
REQPR+A
Sbjct: 160 REQPRHA 166




129|SequenceR|650|641|ASDALEDGRE

>sp|AATA_METB6|A-TYPE ATP synthase subunit A|Methanoregula boonei (strain DSM 21154

Query: 5 LEDGRE 10
LEDGRE
Sbjct: 184 LEDGRE 189


>sp|RPIA_NATPD|RIBOSE-5-PHOSPHATE isomerase A|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ASDALEDG 8
A+DA+EDG
Sbjct: 18 AADAVEDG 25


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ASDALEDGRE 10
ASDA GRE
Sbjct: 6 ASDAAPTGRE 15




130|SequenceR|655|646|KFIELASDAL

>sp|PYRF_PYRAB|OROTIDINE 5'-phosphate decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 KFIELASD 8
KFIELA+D
Sbjct: 123 KFIELAND 130


>sp|Y2648_METMA|UPF0280 protein MM_2648|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KFIELASDAL 10
K+IE A DA+
Sbjct: 39 KYIEAAKDAI 48


>sp|TRPA_METBF|TRYPTOPHAN synthase alpha chain|Methanosarcina barkeri (strain Fusaro /

Query: 1 KFIELASDA 9
KF+E A+DA
Sbjct: 112 KFVEKAADA 120


>sp|TRPA_METAC|TRYPTOPHAN synthase alpha chain|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KFIELASDA 9
KF+E A+DA
Sbjct: 121 KFVEHAADA 129


>sp|BPSA_THEKO|N(4)-BIS(AMINOPROPYL)SPERMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KFIELASDAL 10
KFIE A+D +
Sbjct: 186 KFIEKAADEI 195


>sp|GGGPS_CALMQ|GERANYLGERANYLGLYCERYL phosphate synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 KFIELASDA 9
KFIELA A
Sbjct: 31 KFIELAKGA 39




131|SequenceR|660|651|FASAQKFIEL

>sp|HPPA1_METMA|K(+)-STIMULATED pyrophosphate-energized sodium pump|Methanosarcina mazei (strain

Query: 3 SAQKFIEL 10
+A+KFIEL
Sbjct: 618 NAKKFIEL 625




132|SequenceR|665|656|QSARSFASAQ

***** No hits found ******


133|SequenceR|670|661|LRVSRQSARS

***** No hits found ******


134|SequenceR|675|666|QYVPALRVSR

>sp|LYSK_PYRFU|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus furiosus

Query: 2 YVPALRVSR 10
+VPA VSR
Sbjct: 236 FVPAYEVSR 244


>sp|PYRG_PYRAB|CTP synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 YVPALRV 8
YVP LRV
Sbjct: 175 YVPKLRV 181


>sp|PYRG_THEON|CTP synthase|Thermococcus onnurineus (strain NA1)

Query: 2 YVPALRV 8
YVP LRV
Sbjct: 175 YVPKLRV 181


>sp|AROC_SULTO|CHORISMATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YVPALRVS 9
Y+P +R+S
Sbjct: 358 YIPTVRIS 365


>sp|PYRG_THEKO|CTP synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 YVPALRV 8
YVP LRV
Sbjct: 175 YVPRLRV 181




135|SequenceR|683|671|HKMRELLKQYVPA

>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HKMRELLKQYVPA 13
+++RE +K+Y PA
Sbjct: 239 NELREFIKEYYPA 251


>sp|PYRE_PYRAE|OROTATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 HKMRELLKQYVP 12
+KMRELL++ P
Sbjct: 163 YKMRELLEELRP 174


>sp|PYRE_PYRCJ|OROTATE phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 1 HKMRELLKQYVP 12
+KMRELL+ P
Sbjct: 162 YKMRELLETLKP 173


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 MRELLKQYVP 12
+RE+LK+Y P
Sbjct: 276 IREVLKEYRP 285


>sp|PYRE_PYRAR|OROTATE phosphoribosyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 HKMRELLKQYVP 12
+KMRELL+ P
Sbjct: 162 YKMRELLEALRP 173


>sp|SYC_THEGJ|CYSTEINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 MRELLKQYVP 12
+RELLK+Y P
Sbjct: 277 VRELLKRYNP 286


>sp|RNP3_NATPD|RIBONUCLEASE P protein component 3|Natronomonas pharaonis (strain ATCC 35678

Query: 2 KMRELLKQY 10
K+REL+ QY
Sbjct: 151 KLRELVDQY 159


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 MRELLKQYVPA 13
M+E+ + YVPA
Sbjct: 1 MKEISESYVPA 11


>sp|SRP54_STAMF|SIGNAL recognition particle 54 kDa|Staphylothermus marinus (strain ATCC

Query: 1 HKMRELLKQY 10
+RELLKQY
Sbjct: 406 EDVRELLKQY 415


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC

Query: 1 HKMRELLKQY 10
++RELLK+Y
Sbjct: 62 QRIRELLKEY 71


>sp|TRUD2_METJA|PROBABLE tRNA pseudouridine synthase D|Methanocaldococcus jannaschii (strain

Query: 3 MRELLKQYVP 12
++ELL++YVP
Sbjct: 279 VKELLRKYVP 288


>sp|SYC_PYRFU|CYSTEINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 MRELLKQYVP 12
+RELLK+Y P
Sbjct: 276 IRELLKRYEP 285


>sp|Y536_METPE|DNA-BINDING protein Mpal_0536|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 KMRELLKQYVPA 13
++++LL+Q +PA
Sbjct: 89 QLKDLLRQLIPA 100


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 MRELLKQYVP 12
MR+++K Y P
Sbjct: 674 MRDVVKMYAP 683


>sp|SYC_THEON|CYSTEINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 MRELLKQYVP 12
+RELL++Y P
Sbjct: 277 IRELLQKYSP 286


>sp|AMTAB_METJA|PROBABLE threonylcarbamoyladenosine tRNA

Query: 1 HKMRELLKQYV 11
HK E+LK YV
Sbjct: 107 HKAGEILKNYV 117


>sp|SYFB_METHJ|PHENYLALANINE--TRNA ligase beta subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 MRELLKQYVPA 13
MREL Y+PA
Sbjct: 474 MRELGISYLPA 484


>sp|SYC_PYRHO|CYSTEINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 MRELLKQYVP 12
+RELL++Y P
Sbjct: 277 VRELLQRYSP 286


>sp|SYC_PYRAB|CYSTEINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 MRELLKQYVP 12
+RELL++Y P
Sbjct: 277 VRELLQRYSP 286


>sp|APT_CENSY|ADENINE phosphoribosyltransferase|Cenarchaeum symbiosum (strain A)

Query: 5 ELLKQYVPA 13
ELL++Y PA
Sbjct: 39 ELLRRYPPA 47


>sp|AOCD_METJA|ORNITHINE cyclodeaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KMRELLK 8
KMRELLK
Sbjct: 336 KMRELLK 342


>sp|THIE_METM5|THIAMINE-PHOSPHATE synthase|Methanococcus maripaludis (strain C5 /

Query: 3 MRELLKQYV 11
M EL+K+Y+
Sbjct: 198 MHELIKKYI 206


>sp|Y049_PYRAE|UNCHARACTERIZED serpin-like protein PAE0049|Pyrobaculum aerophilum (strain ATCC

Query: 2 KMRELLKQYVPA 13
K R L+K VPA
Sbjct: 135 KTRGLIKDLVPA 146


>sp|THIE_METMP|THIAMINE-PHOSPHATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 MRELLKQYV 11
M EL+K+Y+
Sbjct: 198 MNELIKKYI 206


>sp|THIE_METM7|THIAMINE-PHOSPHATE synthase|Methanococcus maripaludis (strain C7 /

Query: 3 MRELLKQYV 11
M EL+K+Y+
Sbjct: 198 MNELIKKYI 206


>sp|THIE_METM6|THIAMINE-PHOSPHATE synthase|Methanococcus maripaludis (strain C6 /

Query: 3 MRELLKQYV 11
M EL+K+Y+
Sbjct: 198 MNELIKKYI 206


>sp|DPOL3_SACSH|DNA polymerase 3|Saccharolobus shibatae (strain ATCC 51178

Query: 2 KMRELLKQY 10
K R+L+KQY
Sbjct: 326 KNRDLVKQY 334


>sp|AATI_PYRHO|A-TYPE ATP synthase subunit I|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KMRELLKQYVP 12
++ + LKQY+P
Sbjct: 63 RLVDTLKQYLP 73


>sp|Y1105_HALWD|DNA-BINDING protein HQ_1105A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HKMRELLKQYVP 12
+MRELL++ P
Sbjct: 99 DQMRELLQELKP 110


>sp|Y4416_NATPD|DNA-BINDING protein NP_4416A|Natronomonas pharaonis (strain ATCC 35678

Query: 1 HKMRELLKQYVP 12
KM+ELL++ P
Sbjct: 94 EKMKELLQEMKP 105


>sp|SRP54_SULTO|SIGNAL recognition particle 54 kDa|Sulfurisphaera tokodaii (strain DSM

Query: 2 KMRELLKQY 10
+++ELLKQY
Sbjct: 411 EVKELLKQY 419


>sp|SRP54_SULAC|SIGNAL recognition particle 54 kDa|Sulfolobus acidocaldarius (strain ATCC

Query: 2 KMRELLKQY 10
+++ELLKQY
Sbjct: 411 EVKELLKQY 419


>sp|XPB2_SULTO|DNA 3'-5' translocase XPB2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HKMRELLKQY 10
K+RE+L++Y
Sbjct: 313 EKLREILQEY 322


>sp|Y1286_METJA|UNCHARACTERIZED protein MJ1286|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 MRELLKQYV 11
M+ LLK+YV
Sbjct: 1 MKNLLKRYV 9


>sp|SRP54_PYRFU|SIGNAL recognition particle 54 kDa|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HKMRELLKQY 10
H++R+LL +Y
Sbjct: 145 HQLRQLLDRY 154


>sp|ALAXL_PYRHO|ALANYL-TRNA editing protein AlaX-L|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 MRELLKQYV 11
MRELLK+ +
Sbjct: 357 MRELLKEVI 365


>sp|ASPGP_THEKO|PLANT-TYPE L-asparaginase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KMRELLKQY 10
K+ EL+K+Y
Sbjct: 161 KLNELIKEY 169


>sp|Y1255_METJA|UNCHARACTERIZED glycosyltransferase MJ1255|Methanocaldococcus jannaschii (strain

Query: 2 KMRELLKQY 10
KM+EL K+Y
Sbjct: 344 KMKELAKKY 352


>sp|Y1395_ARCFU|UPF0200/UPF0201 protein AF_1395|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KMRELLKQY 10
K+RELLK++
Sbjct: 78 KIRELLKEH 86


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain

Query: 1 HKMRELLKQY 10
++REL+K+Y
Sbjct: 65 ERIRELVKEY 74


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 HKMRELLKQY 10
++REL+K+Y
Sbjct: 62 ERIRELVKEY 71


>sp|SECY_METTH|PROTEIN translocase subunit SecY|Methanothermobacter thermautotrophicus

Query: 2 KMRELLKQYVP 12
+ ++LK+Y+P
Sbjct: 385 QFEKILKRYIP 395


>sp|RS8_DESA1|SMALL ribosomal subunit protein uS8|Desulfurococcus amylolyticus

Query: 5 ELLKQYVPA 13
E LK+Y+PA
Sbjct: 91 EWLKRYLPA 99


>sp|Y1886_METB6|DNA-BINDING protein Mboo_1886|Methanoregula boonei (strain DSM 21154

Query: 2 KMRELLKQYVPA 13
++++LL+Q PA
Sbjct: 92 QLKDLLRQLAPA 103


>sp|RF1_METM7|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C7

Query: 2 KMRELLKQYVPA 13
K EL+ YVPA
Sbjct: 25 KGTELISVYVPA 36


>sp|ASPGP_PYRFU|PLANT-TYPE L-asparaginase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KMRELLKQY 10
K+ EL+K+Y
Sbjct: 161 KLSELIKEY 169


>sp|SRP54_THEKO|SIGNAL recognition particle 54 kDa|Thermococcus kodakarensis (strain ATCC

Query: 2 KMRELLKQY 10
++RELL QY
Sbjct: 411 EVRELLNQY 419


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 KMRELLKQY 10
++REL+K+Y
Sbjct: 63 RIRELVKEY 71


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KMRELLKQY 10
++RE+LK+Y
Sbjct: 86 ELREILKKY 94


>sp|Y1311_METJA|UNCHARACTERIZED protein MJ1311|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KMRELLKQYV 11
K +E+LK+Y+
Sbjct: 269 KSKEILKEYL 278


>sp|RF1_METVS|PEPTIDE chain release factor subunit|Methanococcus vannielii (strain ATCC

Query: 2 KMRELLKQYVPA 13
K EL+ YVPA
Sbjct: 25 KGTELISVYVPA 36


>sp|SYG_METM5|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 5 ELLKQYVPA 13
ELLK+Y+ A
Sbjct: 420 ELLKEYLTA 428


>sp|SRP54_THEGJ|SIGNAL recognition particle 54 kDa|Thermococcus gammatolerans (strain DSM

Query: 1 HKMRELLKQY 10
++RELL QY
Sbjct: 410 REVRELLAQY 419


>sp|SYG_METM6|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 5 ELLKQYVPA 13
ELLK+Y+ A
Sbjct: 420 ELLKEYLTA 428


>sp|PRIS_METHJ|DNA primase small subunit PriS|Methanospirillum hungatei JF-1 (strain

Query: 2 KMRELLKQYVPA 13
+M+E +K VPA
Sbjct: 59 EMQEYVKSLVPA 70


>sp|RS17E_ARCFU|SMALL ribosomal subunit protein eS17|Archaeoglobus fulgidus (strain

Query: 4 RELLKQY 10
RELLK+Y
Sbjct: 14 RELLKKY 20


>sp|RFCS2_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KMRELLKQYV 11
K+R LLKQ V
Sbjct: 311 KIRRLLKQAV 320


>sp|RF1_METJA|PEPTIDE chain release factor subunit|Methanocaldococcus jannaschii

Query: 2 KMRELLKQYVPA 13
K EL+ Y+PA
Sbjct: 25 KGTELISLYIPA 36


>sp|SRP54_THEON|SIGNAL recognition particle 54 kDa|Thermococcus onnurineus (strain NA1)

Query: 1 HKMRELLKQY 10
++RELL QY
Sbjct: 410 QEVRELLHQY 419




THE END