1|Sequence|1|10|MKAAVLTLAV
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 KAAVLTLAV 10
K VLTLAV
Sbjct: 243 KNKVLTLAV 251
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 MKAAVLTLAV 10
++ AVLT+A+
Sbjct: 1444 IQVAVLTIAI 1453
2|Sequence|6|15|LTLAVLFLTG
>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain
Query: 1 LTLAVLFLT 9
+TLA+LFL+
Sbjct: 48 MTLALLFLS 56
>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)
Query: 1 LTLAVLFLT 9
LTL VLF++
Sbjct: 719 LTLGVLFIS 727
>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 1 LTLAVLFLT 9
LTL VLF++
Sbjct: 719 LTLGVLFIS 727
>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])
Query: 1 LTLAVLFLT 9
LTL VLF++
Sbjct: 719 LTLGVLFIS 727
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
Query: 1 LTLAVLFLT 9
LTL VLF++
Sbjct: 719 LTLGVLFIS 727
>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])
Query: 1 LTLAVLFLT 9
LTL VLF++
Sbjct: 719 LTLGVLFIS 727
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 1 LTLAVLFLT 9
LTL VLF++
Sbjct: 719 LTLGVLFIS 727
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 1 LTLAVLFLT 9
LTL VLF++
Sbjct: 719 LTLGVLFIS 727
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 1 LTLAVLFLT 9
LTL VLF++
Sbjct: 719 LTLGVLFIS 727
3|Sequence|11|20|LFLTGSQARH
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 GSQARH 10
GSQARH
Sbjct: 390 GSQARH 395
>sp|CEP2_HHV2H|CYTOPLASMIC envelopment protein 2|Human herpesvirus 2 (strain HG52)
Query: 5 GSQARH 10
GS+ARH
Sbjct: 222 GSRARH 227
>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)
Query: 5 GSQARH 10
GS+ARH
Sbjct: 224 GSRARH 229
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 3 LTGSQARH 10
+TG QA H
Sbjct: 387 VTGGQAAH 394
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LTGSQARH 10
+ GS+A+H
Sbjct: 516 VAGSEAKH 523
4|Sequence|16|25|SQARHFWQQD
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 3 ARHFWQQ 9
ARHFW +
Sbjct: 318 ARHFWNR 324
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 3 ARHFWQQ 9
ARHFW +
Sbjct: 257 ARHFWNR 263
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 3 ARHFWQQ 9
ARHFW +
Sbjct: 284 ARHFWNR 290
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 3 ARHFWQQ 9
ARHFW +
Sbjct: 257 ARHFWNR 263
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 3 ARHFWQQ 9
ARHFW +
Sbjct: 256 ARHFWNR 262
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 3 ARHFWQQ 9
ARHFW +
Sbjct: 255 ARHFWNR 261
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 3 ARHFWQQD 10
ARH W+++
Sbjct: 531 ARHSWERN 538
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 3 ARHFWQQD 10
ARH W+++
Sbjct: 528 ARHSWERN 535
>sp|NCAP_VSIVN|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 3 ARHFWQQ 9
A HFW Q
Sbjct: 296 AFHFWGQ 302
>sp|NCAP_VSIVC|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 3 ARHFWQQ 9
A HFW Q
Sbjct: 296 AFHFWGQ 302
>sp|NCAP_VSIVA|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 3 ARHFWQQ 9
A HFW Q
Sbjct: 296 AFHFWGQ 302
>sp|NCAP_VSIVS|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 3 ARHFWQQ 9
A HFW Q
Sbjct: 296 AFHFWGQ 302
>sp|NCAP_VSIVG|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 3 ARHFWQQ 9
A HFW Q
Sbjct: 296 AFHFWGQ 302
>sp|M1_I85A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 SQARHFWQ 8
SQARH Q
Sbjct: 207 SQARHMVQ 214
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 ARHFW 7
ARH W
Sbjct: 1766 ARHMW 1770
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 3 ARHFWQQ 9
A HFW Q
Sbjct: 296 AFHFWGQ 302
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 ARHFW 7
ARH W
Sbjct: 1766 ARHMW 1770
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 3 ARHFWQQ 9
A H+W++
Sbjct: 672 AEHYWRR 678
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 5 HFWQQ 9
HFW++
Sbjct: 2132 HFWEK 2136
>sp|UL120_HCMVA|UNCHARACTERIZED protein UL120|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 HFWQQD 10
HF QQD
Sbjct: 149 HFVQQD 154
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 QARHFW 7
QA H W
Sbjct: 1304 QAAHLW 1309
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 QARHFW 7
QA H W
Sbjct: 1304 QAAHLW 1309
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 QARHFW 7
QA H W
Sbjct: 1304 QAAHLW 1309
>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)
Query: 4 RHFWQ 8
+HFW+
Sbjct: 192 KHFWK 196
>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain
Query: 4 RHFWQ 8
+HFW+
Sbjct: 192 KHFWK 196
>sp|NCAP_CHAV|NUCLEOPROTEIN virus (strain I653514) (CHPV)
Query: 5 HFWQQ 9
HFW Q
Sbjct: 299 HFWGQ 303
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 1 SQARHFWQQ 9
+++ HFW Q
Sbjct: 453 NRSSHFWLQ 461
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 1 SQARHFWQQ 9
+++ HFW Q
Sbjct: 454 NRSSHFWLQ 462
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 RHFWQ 8
+HFW+
Sbjct: 192 KHFWK 196
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 1 SQARHFWQQ 9
+ + HFW Q
Sbjct: 504 NSSSHFWLQ 512
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 RHFWQ 8
+HFW+
Sbjct: 192 KHFWK 196
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 ARHFWQQD 10
A H W Q+
Sbjct: 372 ATHLWPQE 379
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 1 SQARHFWQQ 9
+ + HFW Q
Sbjct: 504 NSSSHFWLQ 512
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 1 SQARHFWQQ 9
+ + HFW Q
Sbjct: 498 NSSSHFWLQ 506
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 1 SQARHFWQQ 9
+ + HFW Q
Sbjct: 497 NSSSHFWLQ 505
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 1 SQARHFWQQ 9
+ + HFW Q
Sbjct: 501 NSSSHFWLQ 509
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 4 RHFWQ 8
+HFW+
Sbjct: 192 KHFWK 196
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 3 ARHFWQQD 10
A H W Q+
Sbjct: 372 ATHLWPQE 379
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 5 HFWQQ 9
HFW Q
Sbjct: 500 HFWLQ 504
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 5 HFWQQ 9
HFW Q
Sbjct: 487 HFWLQ 491
>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 4 RHFWQ 8
+HFW+
Sbjct: 192 KHFWK 196
>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 RHFWQ 8
+HFW+
Sbjct: 192 KHFWK 196
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 5 HFWQQ 9
HFW Q
Sbjct: 500 HFWLQ 504
>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 RHFWQ 8
+HFW+
Sbjct: 192 KHFWK 196
5|Sequence|21|30|FWQQDEPPQS
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 2 WQQDEP 7
WQ+D+P
Sbjct: 37 WQRDQP 42
>sp|CAPSH_ADE01|HEXON protein|Human adenovirus C serotype 1
Query: 2 WQQDEPPQ 9
W+Q+EP Q
Sbjct: 16 WEQEEPTQ 23
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 WQQDEPP 8
W++D+PP
Sbjct: 1055 WKKDKPP 1061
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 QQDEPPQS 10
+Q+EPP +
Sbjct: 1180 KQEEPPNT 1187
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 QQDEPPQS 10
+Q+EPP +
Sbjct: 1180 KQEEPPNT 1187
>sp|RP30_VAR67|DNA-DIRECTED RNA polymerase 30 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 FWQQDEPPQ 9
F + DEPP+
Sbjct: 248 FDRNDEPPE 256
>sp|RP30_MONPV|DNA-DIRECTED RNA polymerase 30 kDa|Monkeypox virus (MPXV)
Query: 1 FWQQDEPPQ 9
F + DEPP+
Sbjct: 248 FDRNDEPPE 256
>sp|RP30_VACCC|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FWQQDEPPQ 9
F + DEPP+
Sbjct: 248 FDRNDEPPE 256
>sp|RP30_VACCA|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 FWQQDEPPQ 9
F + DEPP+
Sbjct: 248 FDRNDEPPE 256
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 1 FWQQDEPPQS 10
FW EP S
Sbjct: 147 FWNHSEPRAS 156
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 4 QDEPPQS 10
+D PPQS
Sbjct: 971 EDAPPQS 977
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 3 QQDEPPQS 10
Q+D PPQ+
Sbjct: 429 QKDTPPQA 436
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 2 WQQDEPPQ 9
+ +DEPP+
Sbjct: 326 YSRDEPPE 333
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 3 QQDEPP 8
++DEPP
Sbjct: 2084 RKDEPP 2089
Query: 2 WQQDEPPQ 9
W Q EP Q
Sbjct: 1190 WIQGEPGQ 1197
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 3 QQDEPP 8
++DEPP
Sbjct: 2076 RKDEPP 2081
Query: 2 WQQDEPPQ 9
W Q EP Q
Sbjct: 1182 WIQGEPGQ 1189
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FWQQDEPPQS 10
W+ +PP S
Sbjct: 285 LWEGRDPPDS 294
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 3 QQDEPP 8
++DEPP
Sbjct: 2075 RKDEPP 2080
Query: 2 WQQDEPPQ 9
W Q EP Q
Sbjct: 1181 WIQGEPGQ 1188
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FWQQDEPPQS 10
W+ +PP S
Sbjct: 291 LWEGRDPPDS 300
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 WQQDEPP 8
WQ PP
Sbjct: 2133 WQLSPPP 2139
>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40
Query: 3 QQDEPPQS 10
QQDEP ++
Sbjct: 13 QQDEPEEN 20
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 WQQDEPP 8
WQ PP
Sbjct: 2133 WQLSPPP 2139
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 FWQQDEPP 8
W+ EPP
Sbjct: 2425 LWEAPEPP 2432
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 QQDEPPQS 10
Q+D PP++
Sbjct: 75 QRDRPPRT 82
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 1 FWQQDEPPQS 10
F+Q+ P QS
Sbjct: 460 FYQEAAPAQS 469
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 QQDEPPQS 10
Q+D PP++
Sbjct: 74 QRDRPPRT 81
6|Sequence|26|35|EPPQSPWDRV
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 PQSPW 7
P+SPW
Sbjct: 1183 PKSPW 1187
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 6 PWDRV 10
PWDR+
Sbjct: 2838 PWDRI 2842
Query: 6 PWDRV 10
PWD+V
Sbjct: 1447 PWDQV 1451
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 6 PWDRV 10
PWDR+
Sbjct: 2838 PWDRI 2842
Query: 6 PWDRV 10
PWD+V
Sbjct: 1447 PWDQV 1451
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 6 PWDRV 10
PWDR+
Sbjct: 2820 PWDRI 2824
>sp|UL06_HCMVM|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PQSPWDR 9
PQS W R
Sbjct: 260 PQSAWRR 266
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 6 PWDRV 10
PWDR+
Sbjct: 2838 PWDRI 2842
Query: 6 PWDRV 10
PWD+V
Sbjct: 1447 PWDQV 1451
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 6 PWDRV 10
PWDR+
Sbjct: 2838 PWDRI 2842
Query: 6 PWDRV 10
PWD+V
Sbjct: 1447 PWDQV 1451
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 6 PWDRV 10
PWDR+
Sbjct: 2839 PWDRI 2843
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 6 PWDRV 10
PWDR+
Sbjct: 2839 PWDRI 2843
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 6 PWDRV 10
PWDR+
Sbjct: 2839 PWDRI 2843
>sp|UL06_HCMVA|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PQSPWDR 9
PQS W R
Sbjct: 264 PQSAWRR 270
>sp|VL2_HPV56|MINOR capsid protein L2|Human papillomavirus 56
Query: 3 PQSPWD 8
PQSP+D
Sbjct: 420 PQSPYD 425
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 4 QSPWD 8
Q PWD
Sbjct: 987 QGPWD 991
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 QSPWD 8
Q PWD
Sbjct: 1059 QGPWD 1063
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 QSPWD 8
Q PWD
Sbjct: 1059 QGPWD 1063
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 QSPWD 8
Q PWD
Sbjct: 1059 QGPWD 1063
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 QSPWD 8
Q PWD
Sbjct: 1059 QGPWD 1063
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 5 SPWD 8
SPWD
Sbjct: 1767 SPWD 1770
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 2 PPQSP-WDRV 10
PPQSP DRV
Sbjct: 974 PPQSPAADRV 983
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 EPPQSPW 7
PP SPW
Sbjct: 452 HPPGSPW 458
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 1 EPPQSPW 7
PP SPW
Sbjct: 452 HPPGSPW 458
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 1 EPPQSPW 7
PP SPW
Sbjct: 452 HPPGSPW 458
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 EPPQSPWDR 9
E P PW R
Sbjct: 31 EDPLPPWLR 39
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 6 PWDRV 10
PWD+V
Sbjct: 1447 PWDQV 1451
Query: 6 PWDRV 10
PWD++
Sbjct: 2838 PWDKI 2842
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 PPQSP 6
PPQ+P
Sbjct: 529 PPQTP 533
>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53
Query: 3 PQSPWD 8
PQSP+D
Sbjct: 419 PQSPFD 424
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 4 QSPWD 8
Q PWD
Sbjct: 1052 QGPWD 1056
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 QSPWD 8
Q PWD
Sbjct: 1059 QGPWD 1063
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 QSPWD 8
Q PWD
Sbjct: 1059 QGPWD 1063
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain
Query: 1 EPPQSPWDR 9
E P PW R
Sbjct: 31 EDPLPPWLR 39
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 6 PWDRV 10
PWD+V
Sbjct: 1447 PWDQV 1451
Query: 6 PWDRV 10
PWD++
Sbjct: 2838 PWDKI 2842
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 4 QSPWD 8
Q PWD
Sbjct: 1058 QGPWD 1062
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 4 QSPWD 8
Q PWD
Sbjct: 1056 QGPWD 1060
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 QSPWD 8
Q PWD
Sbjct: 1059 QGPWD 1063
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 4 QSPWD 8
Q PWD
Sbjct: 1056 QGPWD 1060
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 QSPWD 8
Q PWD
Sbjct: 1059 QGPWD 1063
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 5 SPWD 8
SPWD
Sbjct: 1767 SPWD 1770
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 4 QSPWD 8
Q PWD
Sbjct: 1058 QGPWD 1062
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PPQSPWD 8
PP SP D
Sbjct: 48 PPGSPTD 54
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PPQSPWD 8
PP SP D
Sbjct: 48 PPGSPTD 54
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 PPQSPWD 8
P QSPW+
Sbjct: 746 PCQSPWN 752
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 PPQSPWD 8
P QSPW+
Sbjct: 746 PCQSPWN 752
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 PPQSPWD 8
P QSPW+
Sbjct: 746 PCQSPWN 752
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 1 EPPQSPW 7
+ PQ+PW
Sbjct: 300 KSPQAPW 306
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 PPQSP 6
PP+SP
Sbjct: 1191 PPESP 1195
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 3 PQSPWDRV 10
P+S WD +
Sbjct: 118 PRSGWDDI 125
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 2 PPQSPWDR 9
PP PW R
Sbjct: 156 PPSLPWLR 163
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 PPQSP 6
PP+SP
Sbjct: 1191 PPESP 1195
>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain
Query: 3 PQSPWDRV 10
P+S WD +
Sbjct: 118 PRSGWDDI 125
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PPQSP 6
PP+SP
Sbjct: 403 PPESP 407
>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 PPQSP 6
PP+SP
Sbjct: 403 PPESP 407
7|Sequence|31|40|PWDRVKDLAT
>sp|PG200_MONPV|PROTEIN OPG200|Monkeypox virus (MPXV)
Query: 1 PWDRVKD 7
PWD VKD
Sbjct: 76 PWDNVKD 82
>sp|PG200_VACCC|PROTEIN OPG200|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PWDRVKD 7
PWD VKD
Sbjct: 76 PWDDVKD 82
>sp|PG200_VARV|PROTEIN OPG200|Variola virus
Query: 1 PWDRVKD 7
PWD VKD
Sbjct: 76 PWDDVKD 82
>sp|PG200_VAR67|PROTEIN OPG200|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PWDRVKD 7
PWD VKD
Sbjct: 76 PWDDVKD 82
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 2 WDRVKDL 8
WD+ KDL
Sbjct: 500 WDQFKDL 506
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 3 DRVKDLA 9
DR++DLA
Sbjct: 282 DRIRDLA 288
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 WDRVKD 7
WD VKD
Sbjct: 6545 WDYVKD 6550
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 WDRVKD 7
WD VKD
Sbjct: 6565 WDYVKD 6570
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 WDRVKD 7
WD VKD
Sbjct: 6595 WDYVKD 6600
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 WDRVKDL 8
WD+ KDL
Sbjct: 499 WDQYKDL 505
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 WDRVKDLA 9
WDR+K +A
Sbjct: 3174 WDRLKRMA 3181
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 WDRVKDLA 9
WDR+K +A
Sbjct: 3174 WDRLKRMA 3181
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 WDRVKDLA 9
WDR+K +A
Sbjct: 3170 WDRLKRMA 3177
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 2 WDRVKDL 8
W+RV+D
Sbjct: 29 WNRVRDF 35
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 2 WDRVKDL 8
W+RV+D
Sbjct: 29 WNRVRDF 35
>sp|PAP1_YMTV5|POLY(A) polymerase catalytic subunit|Yaba monkey tumor virus (strain
Query: 3 DRVKDLA 9
DR++DLA
Sbjct: 283 DRLEDLA 289
>sp|PAP1_YLDV|POLY(A) polymerase catalytic subunit|Yaba-like disease virus (YLDV)
Query: 3 DRVKDLA 9
DR++DLA
Sbjct: 283 DRLEDLA 289
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 2 WDRVKDLA 9
++RV+D+A
Sbjct: 41 YERVRDIA 48
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 2 WDRVKDLA 9
++RV+D+A
Sbjct: 41 YERVRDIA 48
>sp|VITF3_VARV|INTERMEDIATE transcription factor 3 large|Variola virus
Query: 3 DRVKDL 8
DR+KDL
Sbjct: 374 DRLKDL 379
>sp|VITF3_VAR67|INTERMEDIATE transcription factor 3 large|Variola virus (isolate
Query: 3 DRVKDL 8
DR+KDL
Sbjct: 374 DRLKDL 379
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 WDRVK 6
WDR+K
Sbjct: 1547 WDRLK 1551
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 WDRVKDL 8
W+R +DL
Sbjct: 1006 WEREEDL 1012
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 3 DRVKDLA 9
DRV DLA
Sbjct: 38 DRVPDLA 44
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 PWDRVKD 7
PW +KD
Sbjct: 1066 PWSFLKD 1072
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 WDRVKDLAT 10
W+ +KD T
Sbjct: 932 WNNLKDTVT 940
8|Sequence|36|45|KDLATVYVDV
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 1 KDLATVYVDV 10
K+LA VY DV
Sbjct: 3 KELAAVYADV 12
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 KDLATVYVD 9
+DL T+YVD
Sbjct: 2017 EDLHTLYVD 2025
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 KDLATVYVD 9
+DL T+YVD
Sbjct: 2017 EDLHTLYVD 2025
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 2 DLATVYVDV 10
D+A+ Y D+
Sbjct: 95 DMASTYFDI 103
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 2 DLATVYVDV 10
D+A+ Y D+
Sbjct: 95 DMASTYFDI 103
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 2 DLATVYVDV 10
D+A+ Y D+
Sbjct: 95 DMASTYFDI 103
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 2 DLATVYVDV 10
D+A+ Y D+
Sbjct: 95 DMASTYFDI 103
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KDLATVY 7
KD+AT Y
Sbjct: 1046 KDIATTY 1052
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 2 DLATVYVDV 10
D+A+ Y D+
Sbjct: 95 DMASTYFDI 103
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KDLATVYV 8
+DL TVY+
Sbjct: 489 RDLPTVYL 496
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KDLATVYV 8
+DL TVY+
Sbjct: 489 RDLPTVYL 496
>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain
Query: 3 LATVYVD 9
LATVY D
Sbjct: 472 LATVYAD 478
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 KDLATV 6
KDLATV
Sbjct: 336 KDLATV 341
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 KDLATV 6
KDLATV
Sbjct: 336 KDLATV 341
>sp|VE6_HPV18|PROTEIN E6|Human papillomavirus type 18
Query: 1 KDLATVYVD 9
KDL VY D
Sbjct: 50 KDLFVVYRD 58
9|Sequence|41|50|VYVDVLKDSG
>sp|NEC1_HHV6Z|NUCLEAR egress protein 1|Human herpesvirus 6B (strain Z29)
Query: 1 VYVDVLKDS 9
VY+D+L+DS
Sbjct: 205 VYLDILQDS 213
>sp|NEC1_HHV6H|NUCLEAR egress protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 1 VYVDVLKDS 9
VY+D+L+DS
Sbjct: 205 VYLDILQDS 213
>sp|NEC1_HHV6U|NUCLEAR egress protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VYVDVLKDS 9
VY+D+L++S
Sbjct: 205 VYLDILQES 213
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 VYVDVLKD 8
VY D+LK+
Sbjct: 1139 VYKDILKE 1146
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 YVDVLKDSG 10
YV +KD+G
Sbjct: 404 YVQEMKDAG 412
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 2 YVDVLKDSG 10
YV +KD+G
Sbjct: 404 YVQEMKDAG 412
>sp|NSP1_ROTHD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 YVDVLKDS 9
Y D+LK S
Sbjct: 269 YFDILKSS 276
>sp|NSP1_ROTH6|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 2 YVDVLKDS 9
Y D+LK S
Sbjct: 269 YFDILKSS 276
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 1 VYVDVLKDS 9
V DVLKD+
Sbjct: 27 VKTDVLKDA 35
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 VYVDVLKD 8
V VDVLKD
Sbjct: 686 VTVDVLKD 693
>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 2 YVDVLKDS 9
Y D+LK S
Sbjct: 269 YFDILKSS 276
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 VYVDVLKD 8
V VDVLKD
Sbjct: 686 VTVDVLKD 693
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 VYVDVLKD 8
V VDVLKD
Sbjct: 686 VTVDVLKD 693
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 VYVDVLKD 8
V VDVLKD
Sbjct: 686 VTVDVLKD 693
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 VYVDVLKD 8
V VDVLKD
Sbjct: 686 VTVDVLKD 693
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 VYVDVLKD 8
V VDVLKD
Sbjct: 686 VTVDVLKD 693
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 YVDVLKDSG 10
Y +LKD G
Sbjct: 4173 YTKILKDDG 4181
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 YVDVLKDSG 10
Y +LKD G
Sbjct: 4173 YTKILKDDG 4181
>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 YVDVLKDS 9
+ DVLKD+
Sbjct: 70 FKDVLKDA 77
>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 2 YVDVLKDS 9
Y D+LK S
Sbjct: 269 YFDILKTS 276
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 VYVDVLKDS 9
V+VD+ +DS
Sbjct: 4 VHVDIEEDS 12
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 VYVDVLKDS 9
V+VD+ +DS
Sbjct: 4 VHVDIEEDS 12
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 VYVDVLKDS 9
V+VD+ +DS
Sbjct: 4 VHVDIEEDS 12
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 VYVDVLKDS 9
V+VD+ +DS
Sbjct: 4 VHVDIEEDS 12
>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 2 YVDVLKDS 9
Y D+LK S
Sbjct: 269 YFDILKTS 276
>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11])
Query: 2 YVDVLKDS 9
Y D+LK S
Sbjct: 269 YFDILKTS 276
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 YVDVLKD 8
Y DVLK+
Sbjct: 2486 YYDVLKE 2492
10|Sequence|46|55|LKDSGRDYVS
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LKDSGRDYV 9
+ D GRDY+
Sbjct: 698 IADDGRDYL 706
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 LKDSGRDYV 9
+ SGRDY+
Sbjct: 415 FEKSGRDYI 423
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LKDSGRDYV 9
+ SGRDY+
Sbjct: 415 FEKSGRDYI 423
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LKDSGRDYV 9
+ SGRDY+
Sbjct: 415 FEKSGRDYI 423
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 LKDSGRDYV 9
+ SGRDY+
Sbjct: 415 FEKSGRDYI 423
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 LKDSGRDYV 9
+ SGRDY+
Sbjct: 415 FEKSGRDYI 423
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LKDSGRDYV 9
+ SGRDY+
Sbjct: 415 FEKSGRDYI 423
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 LKDSGRDYV 9
+ SGRDY+
Sbjct: 415 FEKSGRDYI 423
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LKDSGRDYV 9
+ SGRDY+
Sbjct: 415 FEKSGRDYI 423
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LKDSGRDYV 9
+ SGRDY+
Sbjct: 415 FEKSGRDYI 423
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 3 DSGRDYVS 10
D GR+Y+S
Sbjct: 155 DDGREYIS 162
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 2 KDSGRD 7
KD+GRD
Sbjct: 165 KDTGRD 170
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 2 KDSGRD 7
KD+GRD
Sbjct: 165 KDTGRD 170
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 4 SGRDYVS 10
SG+DY+S
Sbjct: 1116 SGQDYIS 1122
>sp|U16_HHV6G|PROTEIN U17/U16|Human herpesvirus 6A (strain GS)
Query: 2 KDSGRDYV 9
K+SGR Y+
Sbjct: 184 KNSGRHYI 191
>sp|PG021_VACC8|HOST range factor p28|Vaccinia virus (strain LC16m8) (VACV)
Query: 4 SGRDYVS 10
+GRDY++
Sbjct: 66 AGRDYIT 72
>sp|PG021_VACC0|HOST range factor p28|Vaccinia virus (strain LC16m0) (VACV)
Query: 4 SGRDYVS 10
+GRDY++
Sbjct: 66 AGRDYIT 72
>sp|U16_HHV6U|PROTEIN U17/U16|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 KDSGRDYV 9
K+SGR Y+
Sbjct: 184 KNSGRHYI 191
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 1 LKDSGRDY 8
L+D GRD+
Sbjct: 116 LQDLGRDF 123
>sp|U17_HHV6Z|PROTEIN U17|Human herpesvirus 6B (strain Z29)
Query: 2 KDSGRDYV 9
K+SGR Y+
Sbjct: 184 KNSGRHYI 191
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 LKDSGRDYVS 10
LKD R Y++
Sbjct: 618 LKDGARTYLT 627
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 LKDSGRDYVS 10
LKD R Y++
Sbjct: 1949 LKDGARTYLA 1958
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 5 GRDYVS 10
GRDY+S
Sbjct: 1226 GRDYLS 1231
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 LKDSGRDY 8
LKDS DY
Sbjct: 1074 LKDSEEDY 1081
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LKDSGRDY 8
LKDS DY
Sbjct: 1066 LKDSEEDY 1073
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 5 GRDYVS 10
GRDY+S
Sbjct: 1223 GRDYLS 1228
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 1 LKDSGRDY 8
LKDS DY
Sbjct: 1074 LKDSEEDY 1081
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LKDSGRDY 8
LKDS DY
Sbjct: 1074 LKDSEEDY 1081
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 LKDSGRDY 8
LKDS DY
Sbjct: 1074 LKDSEEDY 1081
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 1 LKDSGRDY 8
LKDS DY
Sbjct: 1074 LKDSEEDY 1081
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 1 LKDSGRDY 8
LKDS DY
Sbjct: 1074 LKDSEEDY 1081
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 1 LKDSGRDY 8
LKDS DY
Sbjct: 1074 LKDSEEDY 1081
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 1 LKDSGRDY 8
LKDS DY
Sbjct: 1074 LKDSEEDY 1081
>sp|PG021_CWPXB|HOST range factor p28|Cowpox virus (strain Brighton Red)
Query: 4 SGRDYVS 10
+GRDY++
Sbjct: 66 AGRDYMT 72
>sp|PG021_MONPZ|HOST range factor p28|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 4 SGRDYVS 10
+GRDY++
Sbjct: 66 AGRDYMT 72
>sp|PG021_CWPXG|HOST range factor p28|Cowpox virus (strain GRI-90 /
Query: 4 SGRDYVS 10
+GRDY++
Sbjct: 66 AGRDYMT 72
>sp|PG021_VAR67|HOST range factor p28|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 SGRDYVS 10
+GRDY++
Sbjct: 66 AGRDYMT 72
>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 LKDSGRDYVS 10
+ +SG DY S
Sbjct: 435 VTESGNDYTS 444
>sp|PG021_MONPV|HOST range factor p28|Monkeypox virus (MPXV)
Query: 4 SGRDYVS 10
+GRDY++
Sbjct: 66 AGRDYMT 72
>sp|VE2_HPV51|REGULATORY protein E2|Human papillomavirus 51
Query: 2 KDSGRDYVS 10
KD+ DY S
Sbjct: 125 KDNAMDYTS 133
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 4 SGRDYVS 10
SG+D+VS
Sbjct: 1212 SGKDHVS 1218
11|Sequence|51|60|RDYVSQFEGS
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 DYVSQFEG 9
D++++FEG
Sbjct: 1845 DWITEFEG 1852
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 RDYVSQFEGS 10
+D VSQ EG+
Sbjct: 331 KDKVSQLEGT 340
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 RDYVSQFEGS 10
+D VSQ EG+
Sbjct: 331 KDKVSQLEGT 340
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 RDYVSQFEGS 10
+D VSQ EG+
Sbjct: 331 KDEVSQLEGT 340
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 DYVSQFEG 9
+YVS F+G
Sbjct: 3455 EYVSYFDG 3462
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 DYVSQFEG 9
D+++++EG
Sbjct: 1844 DWITEYEG 1851
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 DYVSQFEG 9
D+++++EG
Sbjct: 1844 DWITEYEG 1851
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 DYVSQFEG 9
D+++++EG
Sbjct: 1844 DWITEYEG 1851
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 DYVSQFEG 9
D+++++EG
Sbjct: 1844 DWITEYEG 1851
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 DYVSQFEG 9
D+++++EG
Sbjct: 1844 DWITEYEG 1851
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 DYVSQFEG 9
D+++++EG
Sbjct: 1844 DWITEYEG 1851
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 DYVSQFEG 9
D+++++EG
Sbjct: 1844 DWITEYEG 1851
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 DYVSQFEG 9
D+++++EG
Sbjct: 1846 DWITEYEG 1853
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 DYVSQFEG 9
D+++++EG
Sbjct: 1846 DWITEYEG 1853
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 DYVSQFEG 9
+YVS F+G
Sbjct: 3455 EYVSYFDG 3462
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 YVSQFEGS 10
Y+S FEG+
Sbjct: 116 YLSLFEGA 123
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 1 RDYVSQFEGS 10
+DY +F+G+
Sbjct: 210 KDYCEKFKGN 219
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 1 RDYVSQFEGS 10
+DY +F+G+
Sbjct: 210 KDYCEKFKGN 219
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 RDYVSQFEGS 10
+DY +F+G+
Sbjct: 210 KDYCEKFKGN 219
>sp|VL2_HPV15|MINOR capsid protein L2|Human papillomavirus 15
Query: 2 DYVSQFEGS 10
D+V FEGS
Sbjct: 203 DHVIVFEGS 211
>sp|PG083_VACCC|CORE protease OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 DYVSQFE 8
DY+ QF+
Sbjct: 188 DYIGQFD 194
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RDYVSQF 7
RDY QF
Sbjct: 360 RDYARQF 366
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RDYVSQF 7
RDY QF
Sbjct: 360 RDYARQF 366
>sp|PG083_VARV|CORE protease OPG082|Variola virus
Query: 2 DYVSQFE 8
DY+ QF+
Sbjct: 188 DYIGQFD 194
>sp|PG083_VAR67|CORE protease OPG082|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 DYVSQFE 8
DY+ QF+
Sbjct: 188 DYIGQFD 194
>sp|VL2_HPV22|MINOR capsid protein L2|Human papillomavirus 22
Query: 2 DYVSQFEGS 10
D+V FEGS
Sbjct: 203 DHVFVFEGS 211
>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23
Query: 2 DYVSQFEGS 10
D+V FEGS
Sbjct: 200 DHVFVFEGS 208
>sp|VL2_HPV09|MINOR capsid protein L2|Human papillomavirus 9
Query: 2 DYVSQFEGS 10
D++ FEGS
Sbjct: 204 DHIIVFEGS 212
12|Sequence|56|65|QFEGSALGKQ
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 EGSALGK 9
EGS++GK
Sbjct: 692 EGSSIGK 698
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 EGSALGK 9
EGS++GK
Sbjct: 688 EGSSIGK 694
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 EGSALGK 9
EGS++GK
Sbjct: 677 EGSSIGK 683
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 EGSALGK 9
EGS++GK
Sbjct: 677 EGSSIGK 683
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 EGSALGK 9
EGS++GK
Sbjct: 677 EGSSIGK 683
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 EGSALGK 9
EGS++GK
Sbjct: 677 EGSSIGK 683
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 EGSALGK 9
EGS++GK
Sbjct: 677 EGSSIGK 683
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 3 EGSALGK 9
EGS++GK
Sbjct: 677 EGSSIGK 683
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 EGSALGK 9
EGS++GK
Sbjct: 677 EGSSIGK 683
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 EGSALGK 9
EGS++GK
Sbjct: 677 EGSSIGK 683
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 EGSALGK 9
EGS++GK
Sbjct: 677 EGSSIGK 683
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 3 EGSALGK 9
EGS++GK
Sbjct: 677 EGSSIGK 683
13|Sequence|61|70|ALGKQLNLKL
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 GKQLNL 8
GKQLN+
Sbjct: 1403 GKQLNI 1408
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ALGKQLNLKL 10
ALG LNL +
Sbjct: 605 ALGMSLNLPI 614
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ALGKQLNL 8
ALG LNL
Sbjct: 604 ALGMSLNL 611
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ALGKQLNL 8
ALG LNL
Sbjct: 603 ALGMSLNL 610
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ALGKQLNL 8
ALG LNL
Sbjct: 604 ALGMSLNL 611
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ALGKQLNL 8
ALG LNL
Sbjct: 604 ALGMSLNL 611
14|Sequence|66|75|LNLKLLDNWD
>sp|NSP4_ROTHO|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 2 NLKLLDNWD 10
N+K LD WD
Sbjct: 152 NIKTLDEWD 160
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 2 NLKLLDNWD 10
NLK +DN+D
Sbjct: 464 NLKFMDNFD 472
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 1 LNLKLLDNWD 10
+N +LDNW+
Sbjct: 394 MNSSILDNWN 403
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 1 LNLKLLDNWD 10
+N +LDNW+
Sbjct: 393 MNPAILDNWN 402
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 5 LLDNWD 10
L+DNWD
Sbjct: 68 LIDNWD 73
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 1 LNLKLLDNW 9
+N +LDNW
Sbjct: 405 MNPNILDNW 413
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 1 LNLKLLDNW 9
+N +LDNW
Sbjct: 405 MNPNILDNW 413
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 1 LNLKLLDNWD 10
+N LLD+W+
Sbjct: 394 MNKDLLDDWN 403
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 1 LNLKLLDNWD 10
+N LLD+W+
Sbjct: 395 MNKALLDDWN 404
>sp|NSP4_ROTHT|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 2 NLKLLDNWD 10
N+K LD W+
Sbjct: 152 NIKTLDEWE 160
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 1 LNLKLLDNWD 10
+N LLD+W+
Sbjct: 392 MNNTLLDDWN 401
>sp|NSP4_ROTHV|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate
Query: 2 NLKLLDNWD 10
N+K LD W+
Sbjct: 152 NIKTLDEWE 160
>sp|NSP4_ROTHM|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 2 NLKLLDNWD 10
N+K LD W+
Sbjct: 152 NIKTLDEWE 160
>sp|NSP4_ROTH4|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 2 NLKLLDNWD 10
N+K LD W+
Sbjct: 152 NIKTLDEWE 160
>sp|NSP4_ROTHK|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 2 NLKLLDNWD 10
N+K LD W+
Sbjct: 152 NIKTLDEWE 160
>sp|NSP4_ROTAD|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 2 NLKLLDNWD 10
N+K LD W+
Sbjct: 152 NIKTLDEWE 160
>sp|NSP4_ROTWI|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate RVA/Human/United
Query: 2 NLKLLDNWD 10
N+K LD W+
Sbjct: 152 NIKTLDEWE 160
>sp|NSP4_ROTHW|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 2 NLKLLDNWD 10
N+K LD W+
Sbjct: 152 NIKTLDEWE 160
>sp|NSP4_ROTHP|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 2 NLKLLDNWD 10
N+K LD W+
Sbjct: 152 NIKTLDEWE 160
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 5 LLDNWD 10
+LDNW+
Sbjct: 717 MLDNWE 722
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 LLDNWD 10
+LDNW+
Sbjct: 717 MLDNWE 722
>sp|NSP4_ROTAM|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 2 NLKLLDNWD 10
N+K LD W+
Sbjct: 152 NIKTLDEWE 160
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 1 LNLKLLDNWD 10
+N +LD+W+
Sbjct: 393 MNPDILDDWN 402
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 1 LNLKLLDNWD 10
+N +LD+W+
Sbjct: 395 MNPAILDDWN 404
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 1 LNLKLLDNWD 10
+N +LD+W+
Sbjct: 395 MNPAILDDWN 404
>sp|NSP4_ROTYO|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 2 NLKLLDNW 9
N+K LD W
Sbjct: 152 NIKTLDEW 159
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 1 LNLKLLDNWD 10
+N LL++W+
Sbjct: 422 MNSSLLEDWN 431
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 1 LNLKLLDNWD 10
++ LLD+W+
Sbjct: 393 MDSSLLDDWN 402
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 1 LNLKLLDNWD 10
+N LL++W+
Sbjct: 391 MNSTLLEDWN 400
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 NLKLLDNWD 10
+L L+D WD
Sbjct: 2106 SLSLVDVWD 2114
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 NLKLLDNWD 10
+L L+D WD
Sbjct: 2106 SLSLVDVWD 2114
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 NLKLLDNWD 10
+L L+D WD
Sbjct: 2126 SLSLVDVWD 2134
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 NLKLLDNWD 10
+L L+D WD
Sbjct: 2156 SLSLVDVWD 2164
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 NLKLLDNWD 10
+L L+D WD
Sbjct: 2126 SLSLVDVWD 2134
>sp|HEMA_I60A0|HEMAGGLUTININ A virus (strain A/Ann
Query: 5 LLDNWD 10
LLD WD
Sbjct: 246 LLDMWD 251
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 1 LNLKLLDNWD 10
+N LL++W+
Sbjct: 395 MNSALLEDWN 404
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 NLKLLDNWD 10
+L L+D WD
Sbjct: 2156 SLSLVDVWD 2164
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 1 LNLKLLDNWD 10
+N LL++W+
Sbjct: 423 MNSTLLEDWN 432
>sp|BVLF1_EBVB9|LATE gene expression regulator BVLF1|Epstein-Barr virus (strain B95-8)
Query: 1 LNLKLLDNW 9
L LK+L NW
Sbjct: 21 LLLKMLKNW 29
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 1 LNLKLLDNWD 10
+N LL++W+
Sbjct: 393 MNNSLLEDWN 402
>sp|NSP4_ROTH1|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate
Query: 2 NLKLLDNWD 10
N+K L+ W+
Sbjct: 152 NVKTLEEWE 160
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 4 KLLDNWD 10
KLL +WD
Sbjct: 18 KLLAHWD 24
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 5 LLDNWD 10
LLD WD
Sbjct: 246 LLDMWD 251
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 5 LLDNWD 10
LLD WD
Sbjct: 246 LLDMWD 251
>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957
Query: 5 LLDNWD 10
LLD WD
Sbjct: 246 LLDMWD 251
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 3 LKLLDNW 9
LKL NW
Sbjct: 747 LKLFINW 753
>sp|NSP4_ROTH2|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 2 NLKLLDNW 9
N+K L+ W
Sbjct: 152 NVKTLEEW 159
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 1 LNLKLLDNW 9
+N LL++W
Sbjct: 419 MNSSLLEDW 427
15|Sequence|71|80|LDNWDSVTST
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 1 LDNWDSV 7
+DNWD V
Sbjct: 69 IDNWDLV 75
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 DNWDSVT 8
D WD+VT
Sbjct: 493 DPWDAVT 499
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 DNWDSVT 8
D WD+VT
Sbjct: 494 DPWDAVT 500
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 DNWDSVT 8
D WD+VT
Sbjct: 490 DPWDAVT 496
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LDNWDSVTS 9
LD WDS+ S
Sbjct: 642 LDQWDSLWS 650
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 DNWDSV 7
D WDSV
Sbjct: 481 DEWDSV 486
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LDNWD 5
LDNW+
Sbjct: 718 LDNWE 722
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LDNWDSV 7
LD WDS+
Sbjct: 650 LDKWDSL 656
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 LDNWD 5
LDNW+
Sbjct: 718 LDNWE 722
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 5 DSVTST 10
DSVTST
Sbjct: 2415 DSVTST 2420
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 5 DSVTST 10
DSVTST
Sbjct: 2417 DSVTST 2422
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LDNWDSV 7
LD WDS+
Sbjct: 669 LDKWDSL 675
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LDNWD 5
L+NWD
Sbjct: 380 LNNWD 384
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 4 WDSVTS 9
WD++TS
Sbjct: 2852 WDAITS 2857
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LDNWD 5
L+NWD
Sbjct: 380 LNNWD 384
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 LDNWDSV 7
LD+W+ +
Sbjct: 13 LDDWEKI 19
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 LDNWDSV 7
LD+W+ +
Sbjct: 13 LDDWEKI 19
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 LDNWDSVTS 9
L+NWD T+
Sbjct: 659 LNNWDVFTN 667
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 LDNWDS 6
+DNW S
Sbjct: 437 VDNWKS 442
>sp|UL120_HCMVM|MEMBRANE protein UL120|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LDNWDSVT 8
WDSVT
Sbjct: 16 FGRWDSVT 23
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 LDNWDS 6
+DNW S
Sbjct: 437 VDNWKS 442
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 LDNWDS 6
+DNW S
Sbjct: 437 VDNWKS 442
16|Sequence|76|85|SVTSTFSKLR
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 1 SVTSTFSK 8
SVT TFS+
Sbjct: 262 SVTCTFSR 269
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 1 SVTSTFSK 8
SVT TFS+
Sbjct: 262 SVTCTFSR 269
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 VTSTFSK 8
VTS+FSK
Sbjct: 1395 VTSSFSK 1401
17|Sequence|81|90|FSKLREQLGP
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 SKLREQLG 9
SKLREQ G
Sbjct: 345 SKLREQFG 352
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 SKLREQLG 9
SKLREQ G
Sbjct: 347 SKLREQFG 354
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 SKLREQLG 9
SKLREQ G
Sbjct: 347 SKLREQFG 354
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 SKLREQLG 9
SKLREQ G
Sbjct: 352 SKLREQFG 359
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 SKLREQLG 9
SKLREQ G
Sbjct: 347 SKLREQFG 354
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 SKLREQLG 9
SKLREQ G
Sbjct: 347 SKLREQFG 354
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 SKLREQLG 9
SKLREQ G
Sbjct: 347 SKLREQYG 354
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 SKLREQLG 9
+KLREQ G
Sbjct: 347 TKLREQFG 354
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 KLREQLG 9
KLREQ G
Sbjct: 350 KLREQFG 356
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 FSKLREQLGP 10
F+ L+E +GP
Sbjct: 5121 FATLKEVVGP 5130
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 KLREQLGP 10
K+R+ LGP
Sbjct: 3381 KVRKMLGP 3388
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 3 KLREQLGP 10
KL++ LGP
Sbjct: 483 KLKKMLGP 490
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 3 KLREQLGP 10
KL++ LGP
Sbjct: 476 KLKKMLGP 483
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 3 KLREQLGP 10
KL++ LGP
Sbjct: 474 KLKKMLGP 481
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 3 KLREQLGP 10
KL++ LGP
Sbjct: 481 KLKKMLGP 488
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 3 KLREQLGP 10
KL++ LGP
Sbjct: 481 KLKKMLGP 488
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 3 KLREQLGP 10
KL++ LGP
Sbjct: 476 KLKKMLGP 483
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 3 KLREQLGP 10
KL++ LGP
Sbjct: 472 KLKKMLGP 479
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 3 KLREQLGP 10
KL++ LGP
Sbjct: 482 KLKKMLGP 489
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 3 KLREQLGP 10
KL++ LGP
Sbjct: 473 KLKKMLGP 480
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 3 KLREQLGP 10
KL++ LGP
Sbjct: 481 KLKKMLGP 488
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 3 KLREQLGP 10
KL++ LGP
Sbjct: 473 KLKKMLGP 480
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 3 KLREQLGP 10
KL++ LGP
Sbjct: 483 KLKKMLGP 490
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 2 SKLREQLGP 10
S +RE +GP
Sbjct: 833 SLIREAMGP 841
>sp|VIF_HV1MV|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 KLREQLG 9
K+R+QLG
Sbjct: 179 KIRDQLG 185
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 1 FSKLREQLGP 10
F +LR GP
Sbjct: 502 FQRLRYDFGP 511
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 KLREQLG 9
KL+EQ G
Sbjct: 343 KLKEQFG 349
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SKLREQLGP 10
S +RE +GP
Sbjct: 833 SLIREGMGP 841
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FSKLREQLG 9
++ LRE+LG
Sbjct: 241 YAPLREELG 249
>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FSKLREQLG 9
++ LRE+LG
Sbjct: 241 YAPLREELG 249
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 4 LREQLGP 10
LR+ LGP
Sbjct: 281 LRDYLGP 287
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 4 LREQLGP 10
LR+ LGP
Sbjct: 281 LRDYLGP 287
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 KLREQLGP 10
K+R+ +GP
Sbjct: 3381 KVRKMIGP 3388
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 KLREQLGP 10
K+R+ +GP
Sbjct: 3381 KVRKMIGP 3388
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 KLREQLGP 10
K+R+ +GP
Sbjct: 3381 KVRKMIGP 3388
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 KLREQLGP 10
K+R+ +GP
Sbjct: 3381 KVRKMIGP 3388
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 FSKLREQL 8
F KLR++L
Sbjct: 1361 FQKLRDRL 1368
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 FSKLREQLGP 10
FS++ E+L P
Sbjct: 2208 FSRVPERLAP 2217
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 KLREQLGP 10
K+R+ LGP
Sbjct: 59 KIRKVLGP 66
18|Sequence|86|95|EQLGPVTQEF
>sp|TRX2_HHV11|TRIPLEX capsid protein 2|Human herpesvirus 1 (strain 17)
Query: 1 EQLGPVTQEF 10
+QLGPV E
Sbjct: 193 QQLGPVNAEL 202
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 QLGPVTQE 9
+LGPVT E
Sbjct: 1631 RLGPVTNE 1638
Query: 4 GPVTQEF 10
GPVTQ +
Sbjct: 1099 GPVTQMY 1105
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 EQLGPVTQ 8
+Q GP+TQ
Sbjct: 561 KQTGPITQ 568
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 QLGPVTQE 9
+LGP+T E
Sbjct: 1631 RLGPITNE 1638
Query: 4 GPVTQEF 10
GPVTQ +
Sbjct: 1099 GPVTQMY 1105
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 GPVTQEF 10
GPVTQ +
Sbjct: 1099 GPVTQMY 1105
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 GPVTQEF 10
GPVTQ +
Sbjct: 1099 GPVTQMY 1105
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 GPVTQEF 10
GPVTQ +
Sbjct: 1099 GPVTQMY 1105
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 GPVTQEF 10
GPVTQ +
Sbjct: 1099 GPVTQMY 1105
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 GPVTQEF 10
GP+TQ +
Sbjct: 1095 GPITQMY 1101
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 GPVTQEF 10
GP+TQ +
Sbjct: 1095 GPITQMY 1101
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 GPVTQEF 10
GP+TQ +
Sbjct: 1095 GPITQMY 1101
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 GPVTQEF 10
GP+TQ +
Sbjct: 1095 GPITQMY 1101
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 GPVTQEF 10
GP+TQ +
Sbjct: 1095 GPITQMY 1101
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 GPVTQEF 10
GP+TQ +
Sbjct: 1095 GPITQMY 1101
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 GPVTQEF 10
GP+TQ +
Sbjct: 1095 GPITQMY 1101
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 EQLGPVTQEF 10
+ LGP TQ+
Sbjct: 1074 KSLGPRTQQL 1083
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 EQLGPVTQEF 10
+ LGP TQ+
Sbjct: 1074 KSLGPRTQQL 1083
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 1 EQLGPVTQEF 10
+ LGP TQ+
Sbjct: 1074 KSLGPRTQQL 1083
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 EQLGPVTQEF 10
+ LGP TQ+
Sbjct: 1074 KSLGPRTQQL 1083
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 1 EQLGPVTQEF 10
+ LGP TQ+
Sbjct: 1074 KSLGPRTQQL 1083
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 2 QLGPVTQEF 10
QLG + +EF
Sbjct: 496 QLGELREEF 504
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 QLGPVTQEF 10
QLG + +EF
Sbjct: 497 QLGELREEF 505
>sp|E3145_ADE03|EARLY E3 15.3 kDa protein|Human adenovirus B serotype 3
Query: 2 QLGPVTQEF 10
+LGP Q+F
Sbjct: 79 ELGPQRQKF 87
>sp|E3145_ADE07|EARLY E3 15.3 kDa protein|Human adenovirus B serotype 7
Query: 2 QLGPVTQEF 10
+LGP Q+F
Sbjct: 78 ELGPQRQKF 86
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 QLGPVTQEF 10
QLG + +EF
Sbjct: 497 QLGELREEF 505
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 QLGPVTQEF 10
QLG + +EF
Sbjct: 497 QLGELREEF 505
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 QLGPVTQEF 10
QLG + +EF
Sbjct: 497 QLGELREEF 505
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 QLGPVTQEF 10
QLG + +EF
Sbjct: 497 QLGELREEF 505
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 QLGPVTQEF 10
QLG + +EF
Sbjct: 497 QLGELREEF 505
19|Sequence|91|100|VTQEFWDNLE
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 4 EFWDNL 9
EFWD+L
Sbjct: 710 EFWDDL 715
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 4 EFWDNL 9
EFWD L
Sbjct: 710 EFWDEL 715
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 4 EFWDNL 9
EFWD L
Sbjct: 710 EFWDEL 715
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQEFW+
Sbjct: 681 TQEFWE 686
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQEFW+
Sbjct: 670 TQEFWE 675
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 VTQEFWDNL 9
+ Q+FW+N+
Sbjct: 1581 ILQQFWENI 1589
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 VTQEFWDNL 9
+ Q+FW+N+
Sbjct: 1581 ILQQFWENI 1589
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 VTQEFWDNL 9
+ Q+FW+N+
Sbjct: 1581 ILQQFWENI 1589
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 TQEFWDNLE 10
T+E+W N +
Sbjct: 238 TEEYWLNFD 246
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QEFWDNL 9
+E WDN+
Sbjct: 608 EEIWDNM 614
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 671 TQDFWE 676
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 666 TQDFWE 671
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 672 TQDFWE 677
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 677 TQDFWE 682
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 665 TQDFWE 670
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 670 TQDFWE 675
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 671 TQDFWE 676
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 669 TQDFWE 674
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 672 TQDFWE 677
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 666 TQDFWE 671
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VTQEFWDN 8
+ EF+DN
Sbjct: 502 IVDEFYDN 509
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VTQEFWDN 8
+ EF+DN
Sbjct: 502 IVDEFYDN 509
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VTQEFWDN 8
+ EF+DN
Sbjct: 502 IVDEFYDN 509
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 671 TQDFWE 676
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 681 TQDFWE 686
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 668 TQDFWE 673
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 671 TQDFWE 676
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 676 TQDFWE 681
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 675 TQDFWE 680
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 683 TQDFWE 688
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 683 TQDFWE 688
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 683 TQDFWE 688
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 666 TQDFWE 671
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 668 TQDFWE 673
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 675 TQDFWE 680
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 671 TQDFWE 676
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 671 TQDFWE 676
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 670 TQDFWE 675
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 672 TQDFWE 677
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 671 TQDFWE 676
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 673 TQDFWE 678
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 671 TQDFWE 676
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 664 TQDFWE 669
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 668 TQDFWE 673
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TQEFWD 7
TQ+FW+
Sbjct: 672 TQDFWE 677
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QEFWDNL 9
+E WDN+
Sbjct: 631 EEIWDNM 637
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 3 QEFWDNLE 10
QE+W + E
Sbjct: 547 QEYWKDRE 554
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 VTQEFWDNLE 10
+TQ DNLE
Sbjct: 668 ITQALRDNLE 677
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 3 QEFWDNLE 10
QE+W + E
Sbjct: 547 QEYWKDRE 554
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VTQEFWDN 8
V +++WDN
Sbjct: 1006 VWEQWWDN 1013
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 6 WDNLE 10
WDN+E
Sbjct: 606 WDNIE 610
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 EFWDNL 9
E WDN+
Sbjct: 608 EIWDNM 613
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 EFWDNL 9
E WDN+
Sbjct: 624 EIWDNM 629
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 EFWDNL 9
E WDN+
Sbjct: 610 EIWDNM 615
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 EFWDNL 9
E WDN+
Sbjct: 627 EIWDNM 632
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 EFWDNL 9
E WDN+
Sbjct: 607 EIWDNM 612
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 EFWDNL 9
E WDN+
Sbjct: 620 EIWDNM 625
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 QEFWDN 8
+++WDN
Sbjct: 1009 EQWWDN 1014
>sp|E1BS_ADE41|E1B protein, small T-antigen|Human adenovirus F serotype 41
Query: 4 EFWDNLE 10
EFW L+
Sbjct: 2 EFWSELQ 8
20|Sequence|96|105|WDNLEKETEG
>sp|PG132_MONPV|VIRION morphogenesis protein OPG132|Monkeypox virus (MPXV)
Query: 2 DNLEKET 8
DNLE+ET
Sbjct: 17 DNLERET 23
>sp|PG132_VACCC|VIRION morphogenesis protein OPG132|Vaccinia virus (strain Copenhagen)
Query: 2 DNLEKET 8
DNLE+ET
Sbjct: 17 DNLERET 23
>sp|PG132_VARV|VIRION morphogenesis protein OPG132|Variola virus
Query: 2 DNLEKET 8
DNLE+ET
Sbjct: 17 DNLERET 23
>sp|PG132_VAR67|VIRION morphogenesis protein OPG132|Variola virus (isolate
Query: 2 DNLEKET 8
DNLE+ET
Sbjct: 17 DNLERET 23
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 WDNLEKETEG 10
WD + +T+G
Sbjct: 522 WDEFDVDTQG 531
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 WDNLEKET 8
WD L KE+
Sbjct: 113 WDKLVKES 120
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 WDNLEKET 8
WD L KE+
Sbjct: 113 WDKLVKES 120
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 WDNLEKETE 9
W N E+E E
Sbjct: 2154 WHNGEREYE 2162
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 WDNLEKETE 9
W++L ++TE
Sbjct: 2542 WEDLLEDTE 2550
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 WDNLEKETE 9
W++L ++TE
Sbjct: 2542 WEDLLEDTE 2550
>sp|AN_HHV7J|ALKALINE nuclease|Human herpesvirus 7 (strain JI)
Query: 4 LEKETEG 10
LE+ET G
Sbjct: 113 LERETRG 119
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 WDNLEKET 8
WD EK++
Sbjct: 189 WDQWEKDS 196
21|Sequence|101|110|KETEGLRQEM
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 2 ETEGLR 7
ETEGLR
Sbjct: 324 ETEGLR 329
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KETEGLRQE 9
++ EGLRQ+
Sbjct: 547 EQLEGLRQQ 555
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 2 ETEGLRQEM 10
+ EG+RQ++
Sbjct: 395 DVEGVRQKL 403
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 ETEGLRQEM 10
+ EG+RQ++
Sbjct: 395 DVEGVRQKL 403
22|Sequence|106|115|LRQEMSKDLE
>sp|UL96_HHV6Z|PROTEIN U68|Human herpesvirus 6B (strain Z29)
Query: 1 LRQEMSKDLE 10
LRQ +SKDLE
Sbjct: 7 LRQSISKDLE 16
>sp|UL96_HHV6U|PROTEIN U68|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LRQEMSKDLE 10
LRQ +SKDLE
Sbjct: 7 LRQSISKDLE 16
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 RQEMSKD 8
RQ+MS+D
Sbjct: 43 RQDMSQD 49
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 RQEMSKD 8
RQ+MS+D
Sbjct: 43 RQDMSQD 49
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 1 LRQEMSKDLE 10
LRQ +S+D E
Sbjct: 379 LRQFLSEDCE 388
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 QEMSKDLE 10
Q+MS+DL+
Sbjct: 346 QKMSQDLQ 353
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 QEMSKDLE 10
Q+MS+DL+
Sbjct: 346 QKMSQDLQ 353
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 3 QEMSKDLE 10
Q+MS+DL+
Sbjct: 347 QKMSQDLQ 354
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 QEMSKDLE 10
Q+MS+DL+
Sbjct: 347 QKMSQDLQ 354
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 3 QEMSKDLE 10
Q+MS+DL+
Sbjct: 347 QKMSQDLQ 354
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 QEMSKDLE 10
Q+MS+DL+
Sbjct: 346 QKMSQDLQ 353
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 QEMSKDLE 10
Q+MS+DL+
Sbjct: 354 QKMSQDLQ 361
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 QEMSKDLE 10
Q+MS+DL+
Sbjct: 357 QKMSQDLQ 364
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 3 QEMSKDLE 10
Q+MS+DL+
Sbjct: 357 QKMSQDLQ 364
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 QEMSKDLE 10
Q+MS+DL+
Sbjct: 363 QKMSQDLQ 370
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 QEMSKDL 9
+EM+KDL
Sbjct: 479 REMTKDL 485
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 QEMSKDLE 10
Q+MS+DL+
Sbjct: 357 QKMSQDLQ 364
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 QEMSKDLE 10
Q+MS+DL+
Sbjct: 357 QKMSQDLQ 364
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 QEMSKDLE 10
Q+MS+DL+
Sbjct: 359 QKMSQDLQ 366
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 QEMSKDLE 10
Q+MS+DL+
Sbjct: 357 QKMSQDLQ 364
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 QEMSKDL 9
+EM+KDL
Sbjct: 479 REMTKDL 485
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 QEMSKDL 9
+EM+KDL
Sbjct: 479 REMTKDL 485
23|Sequence|111|120|SKDLEEVKAK
>sp|VIF_HV2D1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 SKDLEEVK 8
+KDLEEV+
Sbjct: 33 TKDLEEVR 40
>sp|VIF_HV2BE|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 SKDLEEVK 8
+KDLEEV+
Sbjct: 33 TKDLEEVR 40
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 DLEEVKAK 10
DLE+VKA+
Sbjct: 2762 DLEKVKAR 2769
>sp|VIF_HV2G1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 SKDLEEVK 8
++DLEEV+
Sbjct: 33 TRDLEEVR 40
>sp|NEC2_HCMVM|NUCLEAR egress protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 KDLEEVK 8
KD+EE+K
Sbjct: 117 KDIEEIK 123
>sp|NEC2_HCMVA|NUCLEAR egress protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 KDLEEVK 8
KD+EE+K
Sbjct: 117 KDIEEIK 123
>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 SKDLEEVK 8
+KDLE+V+
Sbjct: 33 TKDLEQVR 40
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 SKDLEEVKAK 10
S+DLE+ K +
Sbjct: 6626 SRDLEDFKPR 6635
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 2 KDLEEVKAK 10
+DL E+KA+
Sbjct: 80 EDLREIKAR 88
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 1 SKDLEEVKAK 10
+ DLE++KAK
Sbjct: 103 AADLEKLKAK 112
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 1 SKDLEEVKAK 10
+ DLE++KAK
Sbjct: 103 AADLEKLKAK 112
>sp|PG039_MONPV|INTERFERON antagonist OPG039|Monkeypox virus (MPXV)
Query: 1 SKDLEEVK 8
+KDL++VK
Sbjct: 251 TKDLDDVK 258
24|Sequence|116|125|EVKAKVQPYL
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 1 EVKAKVQPYL 10
EV AK++P+L
Sbjct: 252 EVNAKIEPFL 261
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 1 EVKAKVQPYL 10
EV AK++P+L
Sbjct: 252 EVNAKIEPFL 261
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 1 EVKAKVQPYL 10
EV AK++P+L
Sbjct: 252 EVNAKIEPFL 261
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 1 EVKAKVQPYL 10
EV AK++P+L
Sbjct: 252 EVNAKIEPFL 261
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 1 EVKAKVQPYL 10
EV AK++P+L
Sbjct: 252 EVNAKIEPFL 261
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 1 EVKAKVQPYL 10
EV AK++P+L
Sbjct: 252 EVNAKIEPFL 261
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 EVKAKVQPYL 10
EV AK++P+L
Sbjct: 252 EVNAKIEPFL 261
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 1 EVKAKVQPYL 10
EV AK++P+L
Sbjct: 252 EVNAKIEPFL 261
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 EVKAKVQPYL 10
EV AK++P+L
Sbjct: 252 EVNAKIEPFL 261
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 1 EVKAKVQPYL 10
EV AK++P+L
Sbjct: 252 EVNAKIEPFL 261
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 EVKAKVQPYL 10
EV AK++P+L
Sbjct: 252 EVNAKIEPFL 261
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 1 EVKAKVQPYL 10
EV AK++P+L
Sbjct: 252 EVNAKIEPFL 261
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 EVKAKVQPYL 10
EV AK++P+L
Sbjct: 252 EVNAKIEPFL 261
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 EVKAKVQPYL 10
EV AK++P+L
Sbjct: 252 EVNAKIEPFL 261
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 1 EVKAKVQPYL 10
EV AK++P+L
Sbjct: 252 EVNAKIEPFL 261
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 1 EVKAKVQPYL 10
EV AK++P+L
Sbjct: 252 EVNAKIEPFL 261
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 1 EVKAKVQPYL 10
EV AK++P+L
Sbjct: 252 EVNAKIEPFL 261
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 EVKAKVQPYL 10
EV AK++P+L
Sbjct: 252 EVNAKIEPFL 261
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 EVKAKVQPYL 10
EV AK++P+L
Sbjct: 252 EVNAKIEPFL 261
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 EVKAKVQPYL 10
EV AK++P+L
Sbjct: 252 EVNAKIEPFL 261
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 1 EVKAKVQPYL 10
EV AK++P+L
Sbjct: 252 EVNAKIEPFL 261
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 KVQPYL 10
K+QP+L
Sbjct: 1207 KIQPFL 1212
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 KVQPYL 10
K+QP+L
Sbjct: 1207 KIQPFL 1212
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 KVQPYL 10
K+QP+L
Sbjct: 1207 KIQPFL 1212
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 KVQPYL 10
K+QP+L
Sbjct: 1207 KIQPFL 1212
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 KVQPYL 10
K+QP+L
Sbjct: 1207 KIQPFL 1212
25|Sequence|121|130|VQPYLDDFQK
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 QPYLDDFQK 10
PY+DDF K
Sbjct: 5435 SPYIDDFNK 5443
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 QPYLDDFQK 10
PY+DDF K
Sbjct: 5455 SPYIDDFNK 5463
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 QPYLDDFQK 10
PY+DDF K
Sbjct: 5485 SPYIDDFNK 5493
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 QPYLDDFQK 10
PY+DDF +
Sbjct: 5397 SPYIDDFNR 5405
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 3 PYLDDFQ 9
P+ DDFQ
Sbjct: 90 PHCDDFQ 96
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 2 QPYLDDFQK 10
Q Y++DF+K
Sbjct: 114 QKYIEDFKK 122
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 QPYLDDFQK 10
Q Y++DF+K
Sbjct: 114 QKYIEDFKK 122
>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)
Query: 2 QPYLDDFQK 10
+PY+DD K
Sbjct: 396 KPYIDDINK 404
>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 YLDDFQK 10
Y+D FQK
Sbjct: 153 YIDQFQK 159
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 QPYLDDFQK 10
+PY+DD K
Sbjct: 400 KPYIDDINK 408
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 VQPYLDDFQK 10
+Q YL+D Q+
Sbjct: 1007 IQEYLEDRQR 1016
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 2 QPYLDDF 8
QPY D +
Sbjct: 711 QPYFDSY 717
Query: 2 QPYLDDF 8
+P+L DF
Sbjct: 92 KPFLSDF 98
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VQPYLDDF 8
+ PYL DF
Sbjct: 840 IGPYLRDF 847
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 VQPYLDDFQK 10
+Q YL+D Q+
Sbjct: 1008 IQEYLEDRQR 1017
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 VQPYLDDF 8
+ PYL DF
Sbjct: 840 IGPYLRDF 847
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 VQPYLDDFQK 10
+QP LD F++
Sbjct: 1141 LQPELDSFKE 1150
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 VQPYLDDFQK 10
+QP LD F++
Sbjct: 1123 LQPELDSFKE 1132
>sp|VP30_EBOZM|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 PYLDDFQK 10
P DDFQ+
Sbjct: 129 PTADDFQQ 136
>sp|VP30_EBOZ5|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 PYLDDFQK 10
P DDFQ+
Sbjct: 129 PTADDFQQ 136
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VQPYLDDFQ 9
+ PYLD+ +
Sbjct: 522 LHPYLDELR 530
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VQPYLDDFQ 9
+ PYLD+ +
Sbjct: 522 LHPYLDELR 530
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VQPYLDDFQK 10
+ PY DD ++
Sbjct: 545 IPPYGDDIKR 554
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 VQPYLDDFQK 10
+ PY FQK
Sbjct: 1150 IMPYTKLFQK 1159
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 VQPYLDDFQK 10
+ PY FQK
Sbjct: 1150 IMPYTKLFQK 1159
>sp|VU51_HHV6Z|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6B (strain Z29)
Query: 4 YLDDF 8
Y+DDF
Sbjct: 85 YIDDF 89
>sp|VU51_HHV6U|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6A (strain
Query: 4 YLDDF 8
Y+DDF
Sbjct: 85 YIDDF 89
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PYLDDF 8
PY++DF
Sbjct: 255 PYVEDF 260
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 PYLDDF 8
PY++DF
Sbjct: 255 PYVEDF 260
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 3 PYLDDF 8
PY++DF
Sbjct: 255 PYVEDF 260
>sp|UL38_HHV6H|APOPTOSIS inhibitor U19|Human herpesvirus 6B (HHV-6 variant
Query: 4 YLDDFQK 10
Y D FQK
Sbjct: 153 YSDQFQK 159
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 PYLDDF 8
PYL DF
Sbjct: 1893 PYLYDF 1898
26|Sequence|126|135|DDFQKKWQEE
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 DDFQKKWQEE 10
DDF+KKW+ +
Sbjct: 114 DDFEKKWKAD 123
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 DDFQKKWQEE 10
D+F+KKW+ +
Sbjct: 110 DEFEKKWKAD 119
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 DDFQKKWQEE 10
D+F+KKW+ +
Sbjct: 110 DEFEKKWKSD 119
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DDFQKKWQ 8
D+F +KWQ
Sbjct: 792 DNFNEKWQ 799
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 1 DDFQKKWQ 8
D+F +KWQ
Sbjct: 469 DNFDEKWQ 476
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 1 DDFQKKWQ 8
+DF KWQ
Sbjct: 432 EDFDPKWQ 439
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 DDFQKKWQEE 10
+DF++KW+ +
Sbjct: 110 NDFERKWKAD 119
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 DDFQKKWQEE 10
++F+KKW+ +
Sbjct: 110 EEFEKKWKTD 119
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 DDFQKKW 7
+DFQ+ W
Sbjct: 155 EDFQENW 161
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 DDFQKKW 7
+DFQ+ W
Sbjct: 155 EDFQENW 161
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 DDFQKKWQE 9
DDF W E
Sbjct: 189 DDFSVSWTE 197
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 3 FQKKWQEE 10
F KK++EE
Sbjct: 261 FHKKFEEE 268
>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 DDFQKKW 7
DD Q +W
Sbjct: 28 DDMQYRW 34
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 3 FQKKWQEE 10
+++WQEE
Sbjct: 953 LEREWQEE 960
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 DFQKKWQE 9
DF KW E
Sbjct: 439 DFGDKWHE 446
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 DFQKKWQE 9
DF KW E
Sbjct: 439 DFGDKWHE 446
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 3 FQKKWQEE 10
+++WQEE
Sbjct: 952 LEREWQEE 959
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 DFQKKWQE 9
DF KW E
Sbjct: 439 DFGDKWHE 446
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 DFQKKWQE 9
DF KW E
Sbjct: 439 DFGDKWHE 446
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 3 FQKKWQE 9
F+K W E
Sbjct: 506 FEKNWNE 512
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 3 FQKKWQEE 10
+++WQEE
Sbjct: 952 LEREWQEE 959
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 DFQKKWQE 9
DF KW E
Sbjct: 428 DFGDKWHE 435
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 DFQKKWQE 9
DF KW E
Sbjct: 439 DFGDKWHE 446
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 5 KKWQEE 10
++WQEE
Sbjct: 985 EEWQEE 990
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 5 KKWQEE 10
++WQEE
Sbjct: 982 EEWQEE 987
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 5 KKWQEE 10
++WQEE
Sbjct: 981 EEWQEE 986
27|Sequence|131|140|KWQEEMELYR
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 1 KWQEEMELY 9
+W++EM Y
Sbjct: 338 EWEQEMSEY 346
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 1 KWQEEMELY 9
+W++EM Y
Sbjct: 338 EWEQEMNEY 346
>sp|NEC2_HHV2H|NUCLEAR egress protein 2|Human herpesvirus 2 (strain HG52)
Query: 2 WQEEMELYR 10
W + ++L+R
Sbjct: 238 WHQAVQLFR 246
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 KWQEEMEL 8
+W EEM L
Sbjct: 1965 QWSEEMSL 1972
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 KWQEEMEL 8
+W EEM L
Sbjct: 1965 QWSEEMSL 1972
28|Sequence|136|145|MELYRQKVEP
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 1 MELYRQKVEP 10
M L+R ++EP
Sbjct: 398 MSLFRFEIEP 407
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 MELYRQKVE 9
MEL+ +K+E
Sbjct: 1433 MELHTKKIE 1441
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 3 LYRQKVEP 10
LY Q+V+P
Sbjct: 191 LYTQEVKP 198
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 3 LYRQKVEP 10
LY Q+V+P
Sbjct: 185 LYTQEVKP 192
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 3 LYRQKVEP 10
LY Q+V+P
Sbjct: 198 LYTQEVKP 205
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 3 LYRQKVEP 10
LY Q+V+P
Sbjct: 191 LYTQEVKP 198
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 3 LYRQKVEP 10
LY Q+V+P
Sbjct: 185 LYTQEVKP 192
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 3 LYRQKVEP 10
LY Q+V+P
Sbjct: 185 LYTQEVKP 192
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 3 LYRQKVEP 10
LY Q+V+P
Sbjct: 185 LYTQEVKP 192
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 3 LYRQKVEP 10
LY Q+V+P
Sbjct: 197 LYTQEVKP 204
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 3 LYRQKVEP 10
LY Q+V P
Sbjct: 185 LYTQEVNP 192
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 3 LYRQKVEP 10
LY Q+V P
Sbjct: 185 LYTQEVNP 192
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 3 LYRQKVEP 10
LY Q+V P
Sbjct: 198 LYTQEVNP 205
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 3 LYRQKVEP 10
LY Q+V P
Sbjct: 185 LYTQEVNP 192
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 MELYRQKVEP 10
M++Y ++V P
Sbjct: 990 MDIYYKRVRP 999
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 MELYRQKVEP 10
M++Y ++V P
Sbjct: 988 MDIYYKRVRP 997
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 MELYRQKVEP 10
++ YR +VEP
Sbjct: 91 LKRYRTQVEP 100
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 MELYRQK 7
+ELY QK
Sbjct: 664 LELYSQK 670
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 MELYRQK 7
+ELY QK
Sbjct: 664 LELYSQK 670
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 2 ELYRQKV 8
ELY QKV
Sbjct: 433 ELYLQKV 439
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 MELYRQK 7
+ELY QK
Sbjct: 663 LELYSQK 669
>sp|VIF_HV1SE|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 YRQKVEP 10
YR +VEP
Sbjct: 94 YRTQVEP 100
29|Sequence|141|150|QKVEPLRAEL
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 VEPLRAE 9
+EPLRAE
Sbjct: 1065 LEPLRAE 1071
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 VEPLRAE 9
+EPLRAE
Sbjct: 1063 LEPLRAE 1069
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 2 KVEPLRAE 9
KV P+RAE
Sbjct: 1062 KVNPVRAE 1069
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 4 EPLRAE 9
EPLRAE
Sbjct: 2265 EPLRAE 2270
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 EPLRAE 9
EPLRAE
Sbjct: 2263 EPLRAE 2268
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 EPLRAE 9
EPLRAE
Sbjct: 2263 EPLRAE 2268
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 2 KVEPLRA 8
+VEPLRA
Sbjct: 1059 EVEPLRA 1065
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 QKVEPLRAE 9
Q+VE L+AE
Sbjct: 2788 QRVERLKAE 2796
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 VEPLRAE 9
++PLRAE
Sbjct: 1065 LDPLRAE 1071
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 VEPLRAE 9
++PLRAE
Sbjct: 1065 LDPLRAE 1071
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 4 EPLRAEL 10
EPL+AE
Sbjct: 2261 EPLKAEF 2267
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 EPLRAE 9
+PLRAE
Sbjct: 2257 DPLRAE 2262
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 EPLRAE 9
+PLRAE
Sbjct: 2257 DPLRAE 2262
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 EPLRAE 9
+PLRAE
Sbjct: 2257 DPLRAE 2262
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 EPLRAE 9
+PLRAE
Sbjct: 2257 DPLRAE 2262
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 QKVEPLRAEL 10
+K+E LRA L
Sbjct: 788 EKIEELRAHL 797
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 KVEPLRAEL 10
K+E LRA L
Sbjct: 781 KIEELRAHL 789
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 KVEPLRAEL 10
K+E LRA L
Sbjct: 788 KIEELRAHL 796
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 1 QKVEPLRAE 9
+KV+ LRA+
Sbjct: 444 EKVDDLRAD 452
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 1 QKVEPLRAE 9
+KV+ LRA+
Sbjct: 437 EKVDDLRAD 445
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 1 QKVEPLRAE 9
+KV+ LRA+
Sbjct: 435 EKVDDLRAD 443
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 1 QKVEPLRAE 9
+KV+ LRA+
Sbjct: 442 EKVDDLRAD 450
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 1 QKVEPLRAE 9
+KV+ LRA+
Sbjct: 442 EKVDDLRAD 450
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 1 QKVEPLRAE 9
+KV+ LRA+
Sbjct: 433 EKVDDLRAD 441
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 1 QKVEPLRAE 9
+KV+ LRA+
Sbjct: 443 EKVDDLRAD 451
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 QKVEPLRAE 9
+KV+ LRA+
Sbjct: 434 EKVDDLRAD 442
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 1 QKVEPLRAE 9
+KV+ LRA+
Sbjct: 442 EKVDDLRAD 450
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 1 QKVEPLRAE 9
+KV+ LRA+
Sbjct: 434 EKVDDLRAD 442
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 1 QKVEPLRAE 9
+KV+ LRA+
Sbjct: 444 EKVDDLRAD 452
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 QKVEPLRAEL 10
+KVE ++AE+
Sbjct: 1868 RKVENMKAEI 1877
30|Sequence|146|155|LRAELQEGAR
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RAELQEGA 9
RAEL++GA
Sbjct: 1490 RAELEDGA 1497
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RAELQEGA 9
+AEL++GA
Sbjct: 1080 KAELEDGA 1087
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 LRAELQEGAR 10
+RA+L GA+
Sbjct: 424 IRAQLHVGAK 433
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RAELQEGA 9
+AEL++GA
Sbjct: 1490 KAELEDGA 1497
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RAELQEGA 9
+AEL++GA
Sbjct: 1490 KAELEDGA 1497
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 RAELQEGA 9
+AEL++GA
Sbjct: 1490 KAELEDGA 1497
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RAELQEGA 9
+AEL++GA
Sbjct: 1490 KAELEDGA 1497
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RAELQEGA 9
+AEL++GA
Sbjct: 1490 KAELEDGA 1497
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 RAELQEG 8
+AEL+EG
Sbjct: 1488 KAELEEG 1494
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 RAELQEG 8
+AEL+EG
Sbjct: 1488 KAELEEG 1494
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RAELQEGA 9
+AEL++GA
Sbjct: 1490 KAELEDGA 1497
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 RAELQEG 8
+AEL+EG
Sbjct: 1488 KAELEEG 1494
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 RAELQEG 8
+AEL+EG
Sbjct: 1488 KAELEEG 1494
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 RAELQEG 8
+AEL+EG
Sbjct: 1488 KAELEEG 1494
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 LRAELQEGAR 10
+RA+L GA+
Sbjct: 424 IRAQLHVGAK 433
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 LRAELQEGAR 10
+RA+L GA+
Sbjct: 424 IRAQLHVGAK 433
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 LRAELQEGAR 10
+RA+L GA+
Sbjct: 424 IRAQLHVGAK 433
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 LRAELQEGAR 10
+RA+L GA+
Sbjct: 424 IRAQLHVGAK 433
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 LRAELQEGAR 10
+RA+L GA+
Sbjct: 424 IRAQLHVGAK 433
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 LRAELQEGAR 10
+RA+L GA+
Sbjct: 424 IRAQLHVGAK 433
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 LRAELQEGAR 10
+RA+L GA+
Sbjct: 424 IRAQLHVGAK 433
31|Sequence|151|160|QEGARQKLHE
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 1 QEGARQKLHE 10
Q GA Q LH+
Sbjct: 471 QHGAMQDLHD 480
>sp|GN_HHV6Z|ENVELOPE glycoprotein N|Human herpesvirus 6B (strain Z29)
Query: 1 QEGARQKLH 9
++GARQ+L+
Sbjct: 4 KKGARQRLY 12
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 2 EGARQKLHE 10
EGA ++LHE
Sbjct: 641 EGAIKRLHE 649
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 QEGARQKLHE 10
+EGA+ LHE
Sbjct: 1937 REGAKLYLHE 1946
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 QEGARQKLHE 10
+EGA+ LHE
Sbjct: 1937 REGAKLYLHE 1946
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 EGARQKL 8
EG RQKL
Sbjct: 397 EGVRQKL 403
>sp|PG043_MONPV|MONOGLYCERIDE lipase homolog|Monkeypox virus (MPXV)
Query: 2 EGARQKLHE 10
EGA+ LH+
Sbjct: 246 EGAKHHLHK 254
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 2 EGARQKL 8
EG RQKL
Sbjct: 397 EGVRQKL 403
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 1 QEGARQKLHE 10
Q G Q LH+
Sbjct: 471 QHGTMQNLHD 480
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 GARQKLH 9
GA+Q LH
Sbjct: 406 GAKQPLH 412
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 1 QEGARQKLHE 10
Q G Q LH+
Sbjct: 460 QRGTMQNLHD 469
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 GARQKLH 9
GARQK+
Sbjct: 406 GARQKIQ 412
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 1 QEGARQKLHE 10
Q G Q LH+
Sbjct: 471 QHGTMQDLHD 480
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 1 QEGARQKLHE 10
Q G Q LH+
Sbjct: 471 QHGTMQDLHD 480
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 1 QEGARQKLHE 10
Q G Q LH+
Sbjct: 460 QHGTMQNLHD 469
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 1 QEGARQKLHE 10
Q G Q LH+
Sbjct: 471 QHGTMQDLHD 480
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 1 QEGARQKLHE 10
Q G Q LH+
Sbjct: 466 QHGTMQDLHD 475
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 1 QEGARQKLHE 10
Q G Q LH+
Sbjct: 471 QHGTMQDLHD 480
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 1 QEGARQKLHE 10
Q G Q LH+
Sbjct: 471 QHGTLQNLHD 480
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 1 QEGARQKLHE 10
Q G Q LH+
Sbjct: 460 QHGTMQNLHD 469
>sp|PAP1_MCV1|POLY(A) polymerase catalytic subunit|Molluscum contagiosum virus subtype 1
Query: 3 GARQKLH 9
GAR +LH
Sbjct: 317 GARLRLH 323
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 1 QEGARQKLHE 10
Q G Q LH+
Sbjct: 460 QHGTLQNLHD 469
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 QEGARQKLHE 10
Q G Q LH+
Sbjct: 473 QHGTLQNLHD 482
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 1 QEGARQKLH 9
Q G+ Q LH
Sbjct: 471 QHGSLQNLH 479
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 1 QEGARQKLHE 10
Q G Q LH+
Sbjct: 471 QHGTLQNLHD 480
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 QEGARQKLH 9
Q G Q LH
Sbjct: 471 QHGTMQNLH 479
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 QEGARQKLH 9
Q G Q LH
Sbjct: 471 QHGTMQNLH 479
>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)
Query: 2 EGARQKLH 9
EG +KLH
Sbjct: 285 EGETKKLH 292
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 QEGARQKLH 9
Q G Q LH
Sbjct: 471 QHGTMQNLH 479
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 QEGARQKLH 9
Q G Q LH
Sbjct: 471 QHGTMQNLH 479
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 QEGARQKLH 9
Q G Q LH
Sbjct: 471 QHGTMQNLH 479
32|Sequence|156|165|QKLHELQEKL
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 3 LHELQEKL 10
LHE QE+L
Sbjct: 106 LHEYQERL 113
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 QKLHELQEKL 10
Q L+E+Q+K+
Sbjct: 856 QSLYEVQDKI 865
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 QKLHELQEKL 10
Q L+E+Q+K+
Sbjct: 856 QSLYEVQDKI 865
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 QKLHELQEKL 10
Q L+E+Q+K+
Sbjct: 856 QSLYEVQDKI 865
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 QKLHELQEKL 10
Q L+E+Q+K+
Sbjct: 856 QSLYEVQDKI 865
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 LHELQEKL 10
LH+LQ K+
Sbjct: 2316 LHQLQTKI 2323
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 LHELQEKL 10
LH+LQ K+
Sbjct: 2317 LHQLQTKI 2324
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 LHELQEKL 10
LH+LQ K+
Sbjct: 2317 LHQLQTKI 2324
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 QKLHELQEKL 10
Q L+E+Q+K+
Sbjct: 856 QSLYEVQDKI 865
>sp|VE2_HPV70|REGULATORY protein E2|Human papillomavirus type 70
Query: 1 QKLHELQEKL 10
Q+L+ LQEK+
Sbjct: 11 QRLNALQEKI 20
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 4 HELQEKL 10
H+LQ+KL
Sbjct: 1022 HDLQDKL 1028
>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26
Query: 1 QKLHELQEKL 10
Q+L+ QEK+
Sbjct: 6 QRLNACQEKI 15
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 KLHELQEKL 10
K H++QE++
Sbjct: 2785 KEHDVQERI 2793
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 1 QKLHELQEKL 10
Q+L+ QEK+
Sbjct: 6 QRLNACQEKI 15
33|Sequence|161|170|LQEKLSPLGE
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LQEKLSPLGE 10
++EKLSP E
Sbjct: 913 IEEKLSPCKE 922
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LQEKLSPLGE 10
++EKLSP E
Sbjct: 913 IEEKLSPCKE 922
>sp|BMRF2_EBVG|PROTEIN BMRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LQEKLSPLGE 10
L E L PLG+
Sbjct: 288 LHETLGPLGK 297
>sp|BMRF2_EBVB9|PROTEIN BMRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LQEKLSPLGE 10
L E L PLG+
Sbjct: 288 LHETLGPLGK 297
>sp|BMRF2_EBVA8|PROTEIN BMRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LQEKLSPLGE 10
L E L PLG+
Sbjct: 288 LHETLGPLGK 297
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 4 KLSPLGE 10
+L+PLGE
Sbjct: 68 QLTPLGE 74
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 4 KLSPLGE 10
+L+PLGE
Sbjct: 68 QLTPLGE 74
>sp|PHOSP_RABVH|PHOSPHOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 3 EKLSPLGE 10
EKLS LGE
Sbjct: 61 EKLSNLGE 68
>sp|DR7_HHV6U|TRANSACTIVATOR protein DR7|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 EKLSPLG 9
EKL P+G
Sbjct: 83 EKLQPVG 89
>sp|DR6_HHV6Z|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6B (strain Z29)
Query: 3 EKLSPLG 9
EKL P+G
Sbjct: 115 EKLQPVG 121
>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 EKLSPLG 9
EKL P+G
Sbjct: 115 EKLQPVG 121
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LQEKLSPL 8
++E+L+PL
Sbjct: 216 MEERLAPL 223
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LQEKLSPL 8
++E+L+PL
Sbjct: 216 MEERLAPL 223
34|Sequence|166|175|SPLGEEMRDR
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PLGEEMRD 9
P+G +MRD
Sbjct: 457 PIGGDMRD 464
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 1 SPLGEEM 7
SPLGE++
Sbjct: 97 SPLGEQL 103
>sp|U21_HHV7R|U21 glycoprotein|Human herpesvirus 7 (strain RK)
Query: 1 SPLGEEMR 8
SP GEE +
Sbjct: 281 SPFGEEWK 288
>sp|U21_HHV7J|U21 glycoprotein|Human herpesvirus 7 (strain JI)
Query: 1 SPLGEEMR 8
SP GEE +
Sbjct: 281 SPFGEEWK 288
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PLGEEMRD 9
P G +MRD
Sbjct: 468 PAGGDMRD 475
>sp|X_HBVB7|PROTEIN X|Hepatitis B virus genotype B1
Query: 3 LGEEMR 8
LGEEMR
Sbjct: 123 LGEEMR 128
>sp|X_HBVB8|PROTEIN X|Hepatitis B virus genotype B1
Query: 3 LGEEMR 8
LGEEMR
Sbjct: 123 LGEEMR 128
>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5
Query: 5 EEMRDR 10
EEMRDR
Sbjct: 108 EEMRDR 113
>sp|PKG3_ADE02|PACKAGING protein 3|Human adenovirus C serotype 2
Query: 5 EEMRDR 10
EEMRDR
Sbjct: 108 EEMRDR 113
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 1 SPLGEEM 7
SPLGE +
Sbjct: 97 SPLGERL 103
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PLGEEMRD 9
P+G +M+D
Sbjct: 468 PIGGDMKD 475
>sp|Y145_ADE07|UNCHARACTERIZED 14.5 kDa early protein|Human adenovirus B serotype 7
Query: 1 SPLGEEMRDR 10
+PLGE R R
Sbjct: 13 TPLGESYRPR 22
>sp|C_PI1HE|PROTEIN C|Human parainfluenza 1 virus (strain
Query: 2 PLGEEM 7
PLGEE+
Sbjct: 111 PLGEEL 116
>sp|C_PI1HD|PROTEIN C|Human parainfluenza 1 virus (strain
Query: 2 PLGEEM 7
PLGEE+
Sbjct: 111 PLGEEL 116
>sp|C_PI1HC|PROTEIN C|Human parainfluenza 1 virus (strain
Query: 2 PLGEEM 7
PLGEE+
Sbjct: 111 PLGEEL 116
>sp|C_PI1HB|PROTEIN C|Human parainfluenza 1 virus (strain
Query: 2 PLGEEM 7
PLGEE+
Sbjct: 111 PLGEEL 116
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PLGEEMRD 9
P+G +M+D
Sbjct: 477 PVGGDMKD 484
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 2 PLGEEMRD 9
P+G++ RD
Sbjct: 166 PIGQDSRD 173
35|Sequence|171|180|EMRDRARAHV
>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P
Query: 3 RDRARAHV 10
RD RAHV
Sbjct: 188 RDEPRAHV 195
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 5 RARAHV 10
RA+AHV
Sbjct: 66 RAKAHV 71
36|Sequence|176|185|ARAHVDALRT
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 ARAHVDALR 9
R H DALR
Sbjct: 148 GRTHFDALR 156
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 ARAHVDALR 9
+ H DALR
Sbjct: 148 GQTHFDALR 156
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 ARAHVDALRT 10
+++H D L+T
Sbjct: 614 SKSHTDDLKT 623
>sp|VU84_HHV6Z|PROTEIN U84|Human herpesvirus 6B (strain Z29)
Query: 4 HVDALR 9
H DALR
Sbjct: 250 HTDALR 255
>sp|PKG3_ADE12|PACKAGING protein 3|Human adenovirus A serotype 12
Query: 1 ARAHVDA 7
ARAHV A
Sbjct: 124 ARAHVSA 130
37|Sequence|181|190|DALRTHLAPY
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 DALRTHL 7
D+LRTHL
Sbjct: 228 DSLRTHL 234
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 DALRTHL 7
D+LRTHL
Sbjct: 228 DSLRTHL 234
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 DALRTHL 7
D+LRTHL
Sbjct: 228 DSLRTHL 234
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 DALRTHL 7
D+LRTHL
Sbjct: 228 DSLRTHL 234
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 DALRTHL 7
D+LRTHL
Sbjct: 228 DSLRTHL 234
>sp|VPU_HV1Y2|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 4 RTHLAPY 10
R HLAP+
Sbjct: 70 RGHLAPW 76
>sp|VPU_HV1JR|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 4 RTHLAPY 10
R HLAP+
Sbjct: 70 RGHLAPW 76
>sp|VPU_HV1B9|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 4 RTHLAPY 10
R HLAP+
Sbjct: 69 RGHLAPW 75
>sp|VPU_HV1S1|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 4 RTHLAPY 10
R HLAP+
Sbjct: 70 RGHLAPW 76
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 LRTHLAPY 10
R HL PY
Sbjct: 792 FRLHLGPY 799
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 LRTHLAPY 10
R HL PY
Sbjct: 792 FRLHLGPY 799
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 LRTHLAPY 10
R HL PY
Sbjct: 792 FRLHLGPY 799
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 4 RTHLAP 9
RTHL P
Sbjct: 506 RTHLGP 511
>sp|YL11_ADE41|UNCHARACTERIZED 16.5 kDa protein in|Human adenovirus F serotype 41
Query: 3 LRTHLAPY 10
LRT+ +PY
Sbjct: 29 LRTNASPY 36
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 5 THLAP 9
THLAP
Sbjct: 403 THLAP 407
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 DALRTHL 7
+ALR HL
Sbjct: 1038 EALRNHL 1044
38|Sequence|186|195|HLAPYSDELR
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 HLAPYSDE 8
HL PY DE
Sbjct: 795 HLGPYVDE 802
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 HLAPYSDE 8
HL PY DE
Sbjct: 795 HLGPYVDE 802
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 HLAPYSDE 8
HL PY DE
Sbjct: 795 HLGPYVDE 802
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LAPYSDELR 10
L PY DELR
Sbjct: 522 LHPYLDELR 530
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LAPYSDELR 10
L PY DELR
Sbjct: 522 LHPYLDELR 530
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 4 PYSDEL 9
PYSD++
Sbjct: 101 PYSDDI 106
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 4 PYSDEL 9
PYSD++
Sbjct: 101 PYSDDI 106
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 PYSDEL 9
PYSD++
Sbjct: 101 PYSDDI 106
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 LAPYSDELR 10
+ PYS+E +
Sbjct: 1647 MGPYSEEAK 1655
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 1 HLAPYSDE 8
H A Y+DE
Sbjct: 328 HYAMYADE 335
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 4 PYSDEL 9
PY+D+L
Sbjct: 1096 PYNDDL 1101
39|Sequence|191|200|SDELRQRLAA
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 1 SDELRQRLA 9
+DELR+R A
Sbjct: 740 ADELRRRHA 748
>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)
Query: 1 SDELRQRLAA 10
S E+R+RL A
Sbjct: 3 SAEMRERLEA 12
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 2 DELRQRLAA 10
DEL++ LAA
Sbjct: 15 DELQKLLAA 23
40|Sequence|196|205|QRLAARLEAL
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 1 QRLAARLEA 9
QR+A +LEA
Sbjct: 104 QRMALKLEA 112
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 1 QRLAARLEA 9
QR+A +LEA
Sbjct: 104 QRMALKLEA 112
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 1 QRLAARLEA 9
QR+A +LEA
Sbjct: 104 QRMALKLEA 112
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 1 QRLAARLEA 9
+RLA RL+A
Sbjct: 2 ERLAKRLDA 10
>sp|KBZIP_HHV8P|E3 SUMO-protein ligase K-bZIP|Human herpesvirus 8 type P
Query: 3 LAARLEA 9
LAARLEA
Sbjct: 250 LAARLEA 256
>sp|UNG_HHV2H|URACIL-DNA glycosylase|Human herpesvirus 2 (strain HG52)
Query: 1 QRLAARLEAL 10
QRLAAR L
Sbjct: 185 QRLAARRPGL 194
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 QRLAARLEA 9
+ LAA+LEA
Sbjct: 852 EHLAAKLEA 860
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 1 QRLAARLEA 9
+ LAA+LEA
Sbjct: 874 EHLAAKLEA 882
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 QRLAARLEA 9
+ LAA+LEA
Sbjct: 847 KHLAAKLEA 855
41|Sequence|201|210|RLEALKENGG
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 RLEALKENG 9
RL ALK NG
Sbjct: 190 RLTALKSNG 198
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 RLEALKENG 9
RL ALK NG
Sbjct: 190 RLTALKSNG 198
>sp|ORF35_HHV8P|PROTEIN ORF35|Human herpesvirus 8 type P
Query: 1 RLEALKENG 9
RL+AL+ENG
Sbjct: 111 RLDALEENG 119
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 2 LEALKENGG 10
L LKE+GG
Sbjct: 303 LSELKESGG 311
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 2 LEALKENGG 10
L LKE+GG
Sbjct: 303 LSELKESGG 311
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 2 LEALKENGG 10
L LKE+GG
Sbjct: 305 LSELKESGG 313
>sp|PHOSP_VSNJO|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 5 LKENGG 10
+KENGG
Sbjct: 108 MKENGG 113
>sp|PHOSP_VSNJM|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 5 LKENGG 10
+KENGG
Sbjct: 108 MKENGG 113
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 1 RLEALKENGG 10
RL A+K GG
Sbjct: 111 RLHAIKLGGG 120
>sp|SLFN_VACCC|SCHLAFEN-LIKE protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LEALKENGG 10
L LKE+GG
Sbjct: 67 LSELKESGG 75
>sp|NSP5_ROTJ1|NON-STRUCTURAL protein 5|Rotavirus X (strain
Query: 1 RLEALKEN 8
R+E +KEN
Sbjct: 109 RIEKVKEN 116
>sp|VFLIP_HHV8P|VIRAL FLICE protein|Human herpesvirus 8 type P
Query: 2 LEALKENG 9
L ALKE G
Sbjct: 42 LRALKEEG 49
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 LEALKENG 9
++ALK NG
Sbjct: 2138 VQALKHNG 2145
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 LEALKENG 9
++ALK NG
Sbjct: 2138 VQALKHNG 2145
>sp|NSP5_ROTB2|NON-STRUCTURAL protein 5|Rotavirus X (isolate
Query: 1 RLEALKEN 8
R+E +KEN
Sbjct: 109 RIENIKEN 116
42|Sequence|206|215|KENGGARLAE
>sp|VL2_HPV41|MINOR capsid protein L2|Human papillomavirus type 41
Query: 2 ENGGARLAE 10
E+GG LAE
Sbjct: 94 ESGGPSLAE 102
>sp|PHOSP_VSNJO|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 1 KENGGAR 7
KENGG +
Sbjct: 109 KENGGEK 115
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ENGGARLA 9
+N GARL+
Sbjct: 398 QNNGARLS 405
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 1 KENGGAR 7
K NGG R
Sbjct: 305 KSNGGGR 311
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 2 ENGGAR 7
ENGGA+
Sbjct: 358 ENGGAQ 363
>sp|PHOSP_VSNJM|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 1 KENGGAR 7
KENGG +
Sbjct: 109 KENGGEK 115
>sp|NCAP_PUUMU|NUCLEOPROTEIN virus (strain Udmurtia/894CG/91)
Query: 1 KENGGARL 8
KEN G R+
Sbjct: 150 KENKGTRI 157
>sp|NCAP_PUUMS|NUCLEOPROTEIN virus (strain Sotkamo/V-2969/81)
Query: 1 KENGGARL 8
KEN G R+
Sbjct: 150 KENKGTRI 157
>sp|NCAP_PUUMP|NUCLEOPROTEIN virus (strain P360)
Query: 1 KENGGARL 8
KEN G R+
Sbjct: 150 KENKGTRI 157
>sp|NCAP_PUUMK|NUCLEOPROTEIN virus (strain K27)
Query: 1 KENGGARL 8
KEN G R+
Sbjct: 150 KENKGTRI 157
>sp|NCAP_PUUMG|NUCLEOPROTEIN virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 KENGGARL 8
KEN G R+
Sbjct: 150 KENKGTRI 157
>sp|NCAP_PUUME|NUCLEOPROTEIN virus (strain Evo/12CG/93)
Query: 1 KENGGARL 8
KEN G R+
Sbjct: 150 KENKGTRI 157
>sp|NCAP_PUUMB|NUCLEOPROTEIN virus (strain Berkel)
Query: 1 KENGGARL 8
KEN G R+
Sbjct: 107 KENKGTRI 114
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 1 KENGGARL 8
KEN G R+
Sbjct: 150 KENKGTRI 157
>sp|NCAP_SINV|NUCLEOPROTEIN Nombre orthohantavirus (SNV) (Sin
Query: 1 KENGGARL 8
KEN G R+
Sbjct: 150 KENKGTRI 157
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 2 ENGGARLA 9
E GG R+A
Sbjct: 73 EGGGVRVA 80
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 KENGGARLAE 10
KE+G LAE
Sbjct: 1895 KEDGDVLLAE 1904
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 KENGGARLAE 10
KE+G LAE
Sbjct: 1895 KEDGDVLLAE 1904
>sp|NCAP_BCCV|NUCLEOPROTEIN Creek Canal orthohantavirus (BCCV)
Query: 1 KENGGARL 8
KEN G R+
Sbjct: 150 KENKGTRI 157
43|Sequence|211|220|ARLAEYHAKA
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 LAEYHAK 9
A+YHAK
Sbjct: 1815 FAKYHAK 1821
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 1 ARLAEYHA 8
AR+AE H+
Sbjct: 298 ARMAEQHS 305
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 LAEYHAKA 10
LAEYH ++
Sbjct: 384 LAEYHNES 391
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 LAEYHAKA 10
LAEYH ++
Sbjct: 384 LAEYHNES 391
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 3 LAEYHAK 9
+A+YHA+
Sbjct: 1971 IAKYHAQ 1977
>sp|TEG3_HHV2H|TEGUMENT protein UL14|Human herpesvirus 2 (strain HG52)
Query: 2 RLAEYHAKA 10
RLAE H +A
Sbjct: 13 RLAETHLRA 21
>sp|TEG3_HHV11|TEGUMENT protein UL14|Human herpesvirus 1 (strain 17)
Query: 2 RLAEYHAKA 10
RLAE H +A
Sbjct: 13 RLAETHLRA 21
44|Sequence|216|225|YHAKATEHLS
>sp|UL119_HCMVM|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 1 YHAKATEHL 9
YH +T HL
Sbjct: 222 YHPNSTVHL 230
>sp|UL119_HCMVA|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 1 YHAKATEHL 9
YH +T HL
Sbjct: 222 YHPNSTVHL 230
45|Sequence|221|230|TEHLSTLSEK
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 EHLSTLSE 9
+HL+ LSE
Sbjct: 956 DHLAPLSE 963
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 EHLSTLSEK 10
EHL + +EK
Sbjct: 369 EHLHSFTEK 377
46|Sequence|226|235|TLSEKAKPAL
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 TLSEKAK 7
T+SEKAK
Sbjct: 1034 TISEKAK 1040
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 TLSEKAKP 8
TLS K KP
Sbjct: 230 TLSIKVKP 237
47|Sequence|231|240|AKPALEDLRQ
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 PALEDLR 9
P+LED+R
Sbjct: 262 PSLEDIR 268
>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New
Query: 3 PALEDLR 9
PA EDLR
Sbjct: 336 PAFEDLR 342
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 AKPALEDLRQ 10
A P+ EDL+Q
Sbjct: 760 ASPSPEDLQQ 769
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 KPALEDLR 9
KP L+DL+
Sbjct: 1687 KPILDDLK 1694
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 KPALEDLR 9
KP L+DL+
Sbjct: 1687 KPILDDLK 1694
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 3 PALEDLRQ 10
PA++DL++
Sbjct: 31 PAIKDLKK 38
>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)
Query: 3 PALEDLRQ 10
PA++DL++
Sbjct: 31 PAIKDLKK 38
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 3 PALEDLRQ 10
PA++DL++
Sbjct: 31 PAIKDLKK 38
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 3 PALEDLRQ 10
PA++DL++
Sbjct: 31 PAIKDLKK 38
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 3 PALEDLRQ 10
PA++DL++
Sbjct: 31 PAIKDLKK 38
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 3 PALEDLRQ 10
PA++DL++
Sbjct: 31 PAIKDLKK 38
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 3 PALEDLRQ 10
PA++DL++
Sbjct: 31 PAIKDLKK 38
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 3 PALEDLRQ 10
PA++DL++
Sbjct: 31 PAIKDLKK 38
>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)
Query: 3 PALEDLRQ 10
PA++DL++
Sbjct: 31 PAIKDLKK 38
>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)
Query: 3 PALEDLRQ 10
PA++DL++
Sbjct: 31 PAIKDLKK 38
>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)
Query: 3 PALEDLRQ 10
PA++DL++
Sbjct: 31 PAIKDLKK 38
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 3 PALEDLRQ 10
PA++DL++
Sbjct: 31 PAIKDLKK 38
>sp|E1BS_ADE07|E1B protein, small T-antigen|Human adenovirus B serotype 7
Query: 5 LEDLRQ 10
LEDLRQ
Sbjct: 7 LEDLRQ 12
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 KPALEDL 8
KP++ED+
Sbjct: 1877 KPSMEDV 1883
>sp|VE7_HPV57|PROTEIN E7|Human papillomavirus 57
Query: 2 KPALEDL 8
+P+LED+
Sbjct: 5 RPSLEDI 11
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 KPALEDL 8
KP++ED+
Sbjct: 1877 KPSMEDV 1883
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 5 LEDLRQ 10
LED+RQ
Sbjct: 248 LEDIRQ 253
>sp|NCAP_DUGBV|NUCLEOPROTEIN virus
Query: 5 LEDLRQ 10
LED+RQ
Sbjct: 247 LEDIRQ 252
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 KPALEDL 8
KP L+DL
Sbjct: 1687 KPILDDL 1693
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 KPALEDL 8
KP L+DL
Sbjct: 1687 KPILDDL 1693
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 KPALEDL 8
KP L+DL
Sbjct: 1687 KPILDDL 1693
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 2 KPALEDL 8
KP L+DL
Sbjct: 1687 KPILDDL 1693
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 KPALEDL 8
KP L+DL
Sbjct: 1687 KPILDDL 1693
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 2 KPALEDL 8
KP L+DL
Sbjct: 1688 KPILDDL 1694
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 KPALEDL 8
KP L+DL
Sbjct: 1687 KPILDDL 1693
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 KPALEDL 8
KP L+DL
Sbjct: 1687 KPILDDL 1693
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 KPALEDL 8
KP L+DL
Sbjct: 1687 KPILDDL 1693
48|Sequence|236|245|EDLRQGLLPV
>sp|HBSAG_HBVC9|LARGE envelope protein|Hepatitis B virus genotype C
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVA4|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVA7|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVD1|LARGE envelope protein|Hepatitis B virus genotype D
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 264 QGMLPV 269
>sp|HBSAG_HBVC7|LARGE envelope protein|Hepatitis B virus genotype C
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVA3|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVE2|LARGE envelope protein|Hepatitis B virus genotype E
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 274 QGMLPV 279
>sp|HBSAG_HBVE4|LARGE envelope protein|Hepatitis B virus genotype E
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 274 QGMLPV 279
>sp|HBSAG_HBVA6|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 264 QGMLPV 269
>sp|HBSAG_HBVD3|LARGE envelope protein|Hepatitis B virus genotype D
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 264 QGMLPV 269
>sp|HBSAG_HBVD5|LARGE envelope protein|Hepatitis B virus genotype D
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 264 QGMLPV 269
>sp|HBSAG_HBVA2|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 264 QGMLPV 269
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 EDLRQGLLPV 10
EDL + L+PV
Sbjct: 402 EDLARDLVPV 411
>sp|HBSAG_HBVE1|LARGE envelope protein|Hepatitis B virus genotype E
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 274 QGMLPV 279
>sp|HBSAG_HBVB6|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVD7|LARGE envelope protein|Hepatitis B virus genotype D
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 264 QGMLPV 269
>sp|HBSAG_HBVD4|LARGE envelope protein|Hepatitis B virus genotype D
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 264 QGMLPV 269
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 EDLRQGLLPV 10
+ +RQ +LPV
Sbjct: 1878 KSVRQSVLPV 1887
>sp|HBSAG_HBVG3|LARGE envelope protein|Hepatitis B virus genotype G
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 274 QGMLPV 279
>sp|HBSAG_HBVC2|LARGE envelope protein|Hepatitis B virus genotype C
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVA1|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVD2|LARGE envelope protein|Hepatitis B virus genotype D
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 264 QGMLPV 269
>sp|HBSAG_HBVC1|LARGE envelope protein|Hepatitis B virus genotype C
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVC0|LARGE envelope protein|Hepatitis B virus genotype C
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVCJ|LARGE envelope protein|Hepatitis B virus genotype C
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVB8|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVA5|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVB5|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVB3|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVC5|LARGE envelope protein|Hepatitis B virus genotype C
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVB7|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVB4|LARGE envelope protein|Hepatitis B virus genotype B/C
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 264 QGMLPV 269
>sp|HBSAG_HBVB1|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 264 QGMLPV 269
>sp|HBSAG_HBVC8|LARGE envelope protein|Hepatitis B virus genotype C
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 264 QGMLPV 269
>sp|HBSAG_HBVC3|LARGE envelope protein|Hepatitis B virus genotype C
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVC4|LARGE envelope protein|Hepatitis B virus genotype C
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVB2|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 264 QGMLPV 269
>sp|HBSAG_HBVF4|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVA8|LARGE envelope protein|Hepatitis B virus genotype A3
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVH1|LARGE envelope protein|Hepatitis B virus genotype H
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVF6|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVF3|LARGE envelope protein|Hepatitis B virus genotype F1
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVF1|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVA9|LARGE envelope protein|Hepatitis B virus genotype A3
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVH2|LARGE envelope protein|Hepatitis B virus genotype H
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|HBSAG_HBVH3|LARGE envelope protein|Hepatitis B virus genotype H
Query: 5 QGLLPV 10
QG+LPV
Sbjct: 275 QGMLPV 280
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 EDLRQGLLPV 10
EDL + L+P+
Sbjct: 401 EDLARDLVPI 410
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 LRQGLLP 9
+R+GLLP
Sbjct: 1217 IRRGLLP 1223
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 LRQGLLP 9
+R+GLLP
Sbjct: 1217 IRRGLLP 1223
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 LRQGLLP 9
+R+GLLP
Sbjct: 1217 IRRGLLP 1223
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 1 EDLRQG 6
EDL+QG
Sbjct: 823 EDLKQG 828
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 1 EDLRQG 6
EDL+QG
Sbjct: 823 EDLKQG 828
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 3 LRQGLLP 9
+R+GLLP
Sbjct: 1216 IRRGLLP 1222
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 2 DLRQGLL 8
DLR+G+L
Sbjct: 601 DLRRGML 607
49|Sequence|241|250|GLLPVLESFK
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 1 GLLPVLE 7
GLLP+LE
Sbjct: 310 GLLPLLE 316
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 2 LLPVLESF 9
+LP LESF
Sbjct: 49 ILPGLESF 56
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 GLLPVL 6
GLLPVL
Sbjct: 2495 GLLPVL 2500
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LLPVLESF 9
++P LESF
Sbjct: 49 IIPGLESF 56
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LLPVLESF 9
++P LESF
Sbjct: 49 IIPGLESF 56
>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain
Query: 1 GLLPVLES 8
G+LPVL+
Sbjct: 216 GILPVLDD 223
>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains
Query: 1 GLLPVLE 7
G+LPVL+
Sbjct: 216 GILPVLD 222
>sp|PHOSP_PI1HE|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 GLLPVLESFK 10
GLL V+ S+K
Sbjct: 30 GLLDVVLSYK 39
>sp|PHOSP_PI1HD|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 GLLPVLESFK 10
GLL V+ S+K
Sbjct: 30 GLLDVVLSYK 39
>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 GLLPVLESFK 10
GLL V+ S+K
Sbjct: 30 GLLDVVLSYK 39
>sp|PHOSP_PI1HB|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 GLLPVLESFK 10
GLL V+ S+K
Sbjct: 30 GLLDVVLSYK 39
50|Sequence|246|255|LESFKVSFLS
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 2 ESFKVSFLS 10
+SFK FL+
Sbjct: 432 DSFKTGFLA 440
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 2 ESFKVSFLS 10
+SFK FL+
Sbjct: 432 DSFKTGFLA 440
>sp|PHOSP_PIV5|PHOSPHOPROTEIN virus 5 (strain W3)
Query: 2 ESFKVSFLS 10
ESF SFL+
Sbjct: 303 ESFNDSFLT 311
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 3 SFKVSF 8
SFK+SF
Sbjct: 107 SFKISF 112
51|Sequence|251|260|VSFLSALEEY
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 1 VSFLSALEEY 10
+SFLSAL+++
Sbjct: 412 ISFLSALKDF 421
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 1 VSFLSALEEY 10
VSFLSAL+ +
Sbjct: 434 VSFLSALKLF 443
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 1 VSFLSALEEY 10
V+FLSAL+ +
Sbjct: 440 VAFLSALKNF 449
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 1 VSFLSALE 8
+SFLSA E
Sbjct: 801 LSFLSATE 808
>sp|VE6_HPV52|PROTEIN E6|Human papillomavirus 52
Query: 1 VSFLSALEEY 10
+ FLS + EY
Sbjct: 67 LRFLSKISEY 76
>sp|VE6_HPV33|PROTEIN E6|Human papillomavirus 33
Query: 1 VSFLSALEEY 10
+ FLS + EY
Sbjct: 67 LRFLSKISEY 76
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 SFLSALEEY 10
SF++ LE+Y
Sbjct: 629 SFVTDLEKY 637
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 SFLSALEEY 10
SF++ LE+Y
Sbjct: 629 SFVTDLEKY 637
>sp|M1_I000X|MATRIX protein 1|Influenza A virus (strain A/X-31
Query: 1 VSFLSALEEY 10
+SFL+ +E Y
Sbjct: 1 MSFLTEVETY 10
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 SFLSALEEY 10
SF++ LE+Y
Sbjct: 628 SFVTDLEKY 636
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 SFLSALEEY 10
SF++ LE+Y
Sbjct: 628 SFVTDLEKY 636
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 SFLSALEEY 10
SF++ LE+Y
Sbjct: 628 SFVTDLEKY 636
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 SFLSALEEY 10
SF++ LE+Y
Sbjct: 628 SFVTDLEKY 636
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 SFLSALEEY 10
SF++ LE+Y
Sbjct: 631 SFVTDLEKY 639
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 SFLSALEEY 10
SF++ LE+Y
Sbjct: 631 SFVTDLEKY 639
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 SFLSALEEY 10
SF++ LE+Y
Sbjct: 631 SFVTDLEKY 639
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 SFLSALEEY 10
SF++ LE+Y
Sbjct: 631 SFVTDLEKY 639
52|Sequence|256|267|ALEEYTKKLNTQ
>sp|VE4_HPV5B|PROTEIN E4|Human papillomavirus type 5b
Query: 2 LEEYTKKLNT 11
LE+Y KKL T
Sbjct: 229 LEDYWKKLAT 238
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 EEYTKKLNTQ 12
EE+ KK+N+
Sbjct: 2928 EEFVKKVNSH 2937
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 EEYTKKLNT 11
EE+TKK+ T
Sbjct: 2886 EEFTKKVRT 2894
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 EEYTKKLNT 11
EE+TKK+ T
Sbjct: 2886 EEFTKKVRT 2894
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 EEYTKKLNT 11
EE+TKK+ T
Sbjct: 2886 EEFTKKVRT 2894
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 EEYTKKLNT 11
EE+TKK+ T
Sbjct: 2886 EEFTKKVRT 2894
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LEEYTKKLNT 11
LE Y ++LNT
Sbjct: 115 LERYQQRLNT 124
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 EEYTKKLNT 11
EE+TKK+ T
Sbjct: 2886 EEFTKKVRT 2894
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LEEYTKKLNT 11
LE Y ++LNT
Sbjct: 116 LERYQQRLNT 125
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 LEEYTKKLNT 11
LE Y ++LNT
Sbjct: 115 LERYQQRLNT 124
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 EEYTKKLNT 11
EE+ KK+N+
Sbjct: 2926 EEFIKKVNS 2934
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 EEYTKKLNT 11
EE+ KK+N+
Sbjct: 2926 EEFIKKVNS 2934
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 EEYTKKLNT 11
EE+ KK+N+
Sbjct: 2926 EEFIKKVNS 2934
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 EEYTKKLNT 11
EE+ KK+N+
Sbjct: 2926 EEFIKKVNS 2934
>sp|VE4_HPV05|PROTEIN E4|Human papillomavirus 5
Query: 2 LEEYTKKLNT 11
LE+Y KKL T
Sbjct: 229 LEDYWKKLAT 238
>sp|M1_DHVI1|MATRIX protein 1|Dhori virus (strain Indian/1313/61) (Dho)
Query: 2 LEEYTKKLNT 11
L+E K+LNT
Sbjct: 171 LDEVAKQLNT 180
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 EEYTKKLNT 11
EE+TKK+ +
Sbjct: 2888 EEFTKKVRS 2896
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 EEYTKKLNT 11
EE+TKK+ +
Sbjct: 2885 EEFTKKVRS 2893
>sp|CAP8_ADE12|PRE-HEXON-LINKING protein VIII|Human adenovirus A serotype 12
Query: 1 ALEEYTKKLN 10
A ++Y+ K+N
Sbjct: 23 AAQDYSSKMN 32
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 ALEEYTKKLN 10
ALE YT K++
Sbjct: 583 ALENYTCKID 592
>sp|UL147_HCMVM|PUTATIVE viral CXC chemokine 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LEEYTKKLN 10
L +Y KKLN
Sbjct: 143 LWKYAKKLN 151
>sp|MATRX_HMPVC|MATRIX protein|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 ALEEYTK 7
AL+EY+K
Sbjct: 95 ALDEYSK 101