VP26A_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|PGFFGGLFSM

>sp|DNLI1_METAC|DNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GFFGGL 7
GFFGGL
Sbjct: 29 GFFGGL 34


>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC

Query: 1 PGFFGGLF 8
PG GG+F
Sbjct: 78 PGLMGGIF 85


>sp|Y420_METJA|UNCHARACTERIZED protein MJ0420|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GFFGGLFSM 10
G FGGLF+M
Sbjct: 310 GIFGGLFAM 318


>sp|Y1421_METMJ|UPF0173 metal-dependent hydrolase Memar_1421|Methanoculleus marisnigri

Query: 1 PGFFGGL 7
PGF+GG+
Sbjct: 106 PGFYGGV 112


>sp|RS3A_PYRHO|SMALL ribosomal subunit protein eS1|Pyrococcus horikoshii (strain ATCC

Query: 1 PGFFGGL 7
P FFGG+
Sbjct: 26 PDFFGGV 32


>sp|RS3A_PYRFU|SMALL ribosomal subunit protein eS1|Pyrococcus furiosus (strain ATCC

Query: 1 PGFFGGL 7
P FFGG+
Sbjct: 24 PDFFGGV 30


>sp|RS3A_PYRAB|SMALL ribosomal subunit protein eS1|Pyrococcus abyssi (strain GE5 /

Query: 1 PGFFGGL 7
P FFGG+
Sbjct: 25 PDFFGGV 31


>sp|MFNA_METBU|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcoides burtonii

Query: 1 PGFFGGLFSM 10
PG F G F++
Sbjct: 55 PGLFPGTFNL 64


>sp|MALA_HALJT|ALPHA-AMYLASE MalA|Haloarcula japonica (strain ATCC 49778

Query: 1 PGFFGGLFSM 10
P F GLF M
Sbjct: 446 PDFQAGLFDM 455


>sp|SRP54_HALVD|SIGNAL recognition particle 54 kDa|Haloferax volcanii (strain ATCC 29605

Query: 1 PGFFGGL 7
PGF GG+
Sbjct: 351 PGFGGGI 357


>sp|PDXT_METPE|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosphaerula palustris

Query: 2 GFFGGLFS 9
GF GG+F+
Sbjct: 75 GFQGGIFA 82


>sp|Y876_METJA|PUTATIVE ABC transporter permease protein|Methanocaldococcus jannaschii

Query: 2 GFFGGLFSM 10
G+ GG+FSM
Sbjct: 128 GWCGGIFSM 136




2|SequenceR|15|6|DIECIPGFFG

>sp|PYRI_SULTO|ASPARTATE carbamoyltransferase regulatory chain|Sulfurisphaera tokodaii

Query: 1 DIECIPGF 8
D+E IPGF
Sbjct: 120 DVEAIPGF 127


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 1 DIECIPGFFG 10
++ C+PG +G
Sbjct: 52 NVACLPGIYG 61


>sp|KDPB_THEAC|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 IECIPGFFG 10
I PGFFG
Sbjct: 41 IYAFPGFFG 49


>sp|GLFT_THEAC|GLUTAMATE formimidoyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 2 IECIPGF 8
+EC+P F
Sbjct: 4 VECVPNF 10


>sp|TRKA_ARCFU|TRK system potassium uptake protein|Archaeoglobus fulgidus (strain ATCC

Query: 1 DIECIPGFFG 10
D+E + G FG
Sbjct: 209 DVEMLKGIFG 218


>sp|UVRB_METMP|UVRABC system protein B|Methanococcus maripaludis (strain DSM 14266

Query: 1 DIECIPGFF 9
D+E +PG F
Sbjct: 188 DMELVPGRF 196


>sp|OTC_METTH|ORNITHINE carbamoyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 DIECIPGF 8
D+ C PG+
Sbjct: 171 DVACPPGY 178


>sp|CBIF_METJA|COBALT-PRECORRIN-4 C(11)-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DIECIPG 7
D+E IPG
Sbjct: 107 DVEIIPG 113


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DIECIPGFF 9
++ C+PG +
Sbjct: 49 NVACLPGIY 57


>sp|G3P_METS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 IECIPGFFG 10
++C PG G
Sbjct: 84 VDCTPGTIG 92


>sp|Y1386_ARCFU|UNCHARACTERIZED protein AF_1386|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ECIPGFFG 10
+CIP FG
Sbjct: 67 QCIPYLFG 74




3|SequenceR|20|11|DNLVIDIECI

>sp|KPTA_THEON|PROBABLE RNA 2'-phosphotransferase|Thermococcus onnurineus (strain NA1)

Query: 3 LVIDIECI 10
LVID EC+
Sbjct: 144 LVIDAECL 151


>sp|KPTA_THEKO|PROBABLE RNA 2'-phosphotransferase|Thermococcus kodakarensis (strain ATCC

Query: 3 LVIDIECI 10
LVID EC+
Sbjct: 144 LVIDAECL 151


>sp|COOS1_METAC|CARBON monoxide dehydrogenase 1|Methanosarcina acetivorans (strain ATCC

Query: 3 LVIDIECI 10
+V+D++CI
Sbjct: 334 MVVDVQCI 341


>sp|KPTA_AERPE|PROBABLE RNA 2'-phosphotransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 LVIDIECI 10
L++D+EC+
Sbjct: 176 LLVDVECL 183


>sp|COOS1_METMA|CARBON monoxide dehydrogenase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LVIDIECI 10
+++D++CI
Sbjct: 334 MIVDVQCI 341


>sp|KPTA_PYRHO|PROBABLE RNA 2'-phosphotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LVIDIECI 10
L+ID EC+
Sbjct: 141 LIIDAECL 148


>sp|MCRB_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DNLVIDI 7
DNLVID+
Sbjct: 252 DNLVIDL 258


>sp|DNLI_METAR|DNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DNLVIDIECI 10
D ++D ECI
Sbjct: 294 DTAILDSECI 303


>sp|AMPPA_METAR|AMP phosphorylase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DNLVIDIEC 9
D +V+DI C
Sbjct: 275 DTMVLDIPC 283


>sp|KPTA_PYRFU|PROBABLE RNA 2'-phosphotransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LVIDIECI 10
L+ID EC+
Sbjct: 146 LLIDAECL 153


>sp|DNLI_METMP|DNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DNLVIDIECI 10
DN++++ EC+
Sbjct: 294 DNIILEGECV 303


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 DNLVIDIECI 10
D +VID +CI
Sbjct: 305 DVIVIDEQCI 314


>sp|DNLI_META3|DNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 NLVIDIECI 10
NL+I+ EC+
Sbjct: 297 NLIIEGECV 305


>sp|AATE_PYRIL|A-TYPE ATP synthase subunit E|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DNLVIDIEC 9
NL+IDIE
Sbjct: 20 SNLLIDIET 28


>sp|AMPPA_METMP|AMP phosphorylase|Methanococcus maripaludis (strain DSM 14266

Query: 2 NLVIDIECI 10
NLV+DI I
Sbjct: 160 NLVVDIHSI 168


>sp|Y692_METTH|UNCHARACTERIZED protein MTH_692|Methanothermobacter thermautotrophicus (strain

Query: 1 DNLVIDIECI 10
DN V+ ++C+
Sbjct: 75 DNTVVVVDCV 84




4|SequenceR|25|16|KRTEGDNLVI

>sp|AMPD_METJA|ANHYDROMEVALONATE phosphate decarboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KRTEGD 6
KRTEGD
Sbjct: 321 KRTEGD 326


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KRTEGDNL 8
KRTEG+ L
Sbjct: 461 KRTEGEKL 468


>sp|DPO4_NITMS|DNA polymerase IV|Nitrosopumilus maritimus (strain SCM1)

Query: 1 KRTEGD 6
KRTEGD
Sbjct: 119 KRTEGD 124


>sp|HELS_HALMA|ATP-DEPENDENT DNA helicase Hel308|Haloarcula marismortui (strain ATCC 43049

Query: 3 TEGDNLV 9
TEG+NLV
Sbjct: 38 TEGENLV 44


>sp|Y2347_METMJ|PUTATIVE HTH-type transcriptional regulatory protein|Methanoculleus

Query: 4 EGDNLVI 10
+GDNLVI
Sbjct: 38 KGDNLVI 44




5|SequenceR|30|21|KMEAMKRTEG

>sp|ATGT_META3|TRNA-GUANINE(15) transglycosylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KMEAMKRTE 9
KME KRTE
Sbjct: 295 KMEKRKRTE 303


>sp|GADH_PICTO|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Picrophilus torridus (strain ATCC 700027

Query: 1 KMEAMKRTEG 10
K EAM TEG
Sbjct: 92 KREAMDETEG 101




6|SequenceR|35|26|KGDETKMEAM

>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GDETKMEA 9
GDE KMEA
Sbjct: 166 GDEAKMEA 173


>sp|ADEC_METBU|ADENINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KGDETKM 7
KGDET+M
Sbjct: 59 KGDETEM 65


>sp|Y694_METJA|UNCHARACTERIZED NOP5 family protein MJ0694|Methanocaldococcus jannaschii (strain

Query: 2 GDETKMEAM 10
GDE K+E +
Sbjct: 60 GDEIKLETL 68


>sp|ACYP_PYRHO|ACYLPHOSPHATASE horikoshii (strain ATCC 700860

Query: 1 KGDETKMEAM 10
+GDE ++EA+
Sbjct: 49 EGDEERVEAL 58




7|SequenceR|40|31|YHKEVKGDET

>sp|SYFB_META3|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 YHKEVKGDE 9
Y+KE+ GDE
Sbjct: 152 YYKEINGDE 160


>sp|NADM_SULTO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 KEVKGDE 9
KE+KGDE
Sbjct: 156 KEIKGDE 162


>sp|SYFB_METMP|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain DSM 14266

Query: 2 HKEVKGDE 9
+KE+KGDE
Sbjct: 158 YKEIKGDE 165


>sp|SYFB_METVS|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus vannielii (strain ATCC 35089

Query: 2 HKEVKGDE 9
+KE+KGDE
Sbjct: 158 YKEIKGDE 165


>sp|SYFB_METM7|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C7 /

Query: 2 HKEVKGDE 9
+KE+KGDE
Sbjct: 158 YKEIKGDE 165


>sp|SYFB_METM5|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C5 /

Query: 2 HKEVKGDE 9
+KE+KGDE
Sbjct: 158 YKEIKGDE 165


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YHKEVKGDE 9
+H+ +KGDE
Sbjct: 468 WHEAIKGDE 476


>sp|APBC_PYRAB|IRON-SULFUR cluster carrier protein|Pyrococcus abyssi (strain GE5 /

Query: 3 KEVKGDE 9
KE+KGDE
Sbjct: 286 KEMKGDE 292


>sp|SYFB_METJA|PHENYLALANINE--TRNA ligase beta subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YHKEVKGD 8
Y+KEV GD
Sbjct: 152 YYKEVSGD 159


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YHKEVKGDE 9
+H+ +KGDE
Sbjct: 470 WHEAIKGDE 478


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YHKEVKGDE 9
+H+ +KGDE
Sbjct: 470 WHEAIKGDE 478


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 YHKEVKGDE 9
+H+ +KGDE
Sbjct: 470 WHEAIKGDE 478


>sp|PYCB_METTH|PYRUVATE carboxylase subunit B|Methanothermobacter thermautotrophicus

Query: 1 YHKEVKGDE 9
+H EV GDE
Sbjct: 467 FHVEVDGDE 475


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YHKEVKGDET 10
Y+ EV+GDE+
Sbjct: 716 YNLEVEGDES 725


>sp|SYFB_METM6|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C6 /

Query: 2 HKEVKGDE 9
+KE++GDE
Sbjct: 158 YKEIRGDE 165


>sp|MVK_METJA|MEVALONATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YHKEVKGDE 9
Y+KE+K DE
Sbjct: 127 YNKELKDDE 135


>sp|METK_AERPE|S-ADENOSYLMETHIONINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 HKEVKGDE 9
H+EVKG E
Sbjct: 333 HREVKGVE 340


>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KEVKGD 8
KE+KGD
Sbjct: 286 KEIKGD 291


>sp|RS6E_HYPBU|SMALL ribosomal subunit protein eS6|Hyperthermus butylicus (strain DSM

Query: 1 YHKEVKGDET 10
Y +VKGDE+
Sbjct: 20 YKVKVKGDES 29


>sp|Y903_METJA|UNCHARACTERIZED protein MJ0903|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YHKEVKGD 8
++KEV GD
Sbjct: 489 FYKEVNGD 496


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 HKEVKGDET 10
H E +GDET
Sbjct: 441 HVEDRGDET 449


>sp|THII_SACS2|PROBABLE tRNA sulfurtransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 YHKEVKG 7
YHK +KG
Sbjct: 153 YHKVIKG 159


>sp|SUCC_METJA|SUCCINATE--COA ligase [ADP-forming] subunit beta|Methanocaldococcus jannaschii

Query: 1 YHKEVKGDET 10
++KEVKG++
Sbjct: 74 FNKEVKGEKV 83




8|SequenceR|45|36|GDYFLYHKEV

>sp|SPSS_METTP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GDYFLYHK 8
G YFLYH+
Sbjct: 332 GRYFLYHE 339


>sp|DOXD_ACIAM|THIOSULFATE dehydrogenase [quinone] large subunit|Acidianus ambivalens

Query: 2 DYFLYHK 8
DYFLY K
Sbjct: 160 DYFLYKK 166


>sp|GADH_THEAC|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GDYFLYHKEV 10
GDY + HK+V
Sbjct: 209 GDYIVEHKKV 218


>sp|GADH_PICTO|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Picrophilus torridus (strain ATCC 700027

Query: 1 GDYFLYHKEV 10
GDY + HK+V
Sbjct: 207 GDYIVEHKKV 216


>sp|HMGCS_SULAC|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DYFLYHK 8
DYF++H+
Sbjct: 230 DYFVFHQ 236


>sp|HMGCS_SULTO|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DYFLYHK 8
DYF++H+
Sbjct: 230 DYFVFHQ 236


>sp|HMGCS_METS5|HYDROXYMETHYLGLUTARYL-COA synthase|Metallosphaera sedula (strain ATCC 51363

Query: 2 DYFLYHK 8
DYF++H+
Sbjct: 230 DYFVFHQ 236


>sp|HMGCS_SACS2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DYFLYHK 8
DYF++H+
Sbjct: 232 DYFVFHQ 238


>sp|HMGCS_SACI6|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 DYFLYHK 8
DYF++H+
Sbjct: 232 DYFVFHQ 238


>sp|HMGCS_SACI4|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 DYFLYHK 8
DYF++H+
Sbjct: 232 DYFVFHQ 238


>sp|HMGCS_SACI3|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 DYFLYHK 8
DYF++H+
Sbjct: 232 DYFVFHQ 238


>sp|HMGCS_SACI7|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 DYFLYHK 8
DYF++H+
Sbjct: 232 DYFVFHQ 238


>sp|HMGCS_SACI2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 DYFLYHK 8
DYF++H+
Sbjct: 232 DYFVFHQ 238


>sp|HMGCS_SACI1|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 DYFLYHK 8
DYF++H+
Sbjct: 232 DYFVFHQ 238


>sp|THIC_METJA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YFLYHKE 9
Y LYH E
Sbjct: 193 YILYHNE 199


>sp|Y2121_ARCFU|UNCHARACTERIZED protein AF_2121|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GDYFLYHKEV 10
GD+F+Y K V
Sbjct: 23 GDFFIYLKYV 32


>sp|ISF2_ARCFU|IRON-SULFUR flavoprotein AF_1519|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DYFLYHKE 9
DY L HKE
Sbjct: 49 DYCLKHKE 56


>sp|PGMI_THEAC|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma acidophilum

Query: 1 GDYFLYH 7
GDY YH
Sbjct: 281 GDYVTYH 287


>sp|PGMI_THEVO|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma volcanium

Query: 1 GDYFLYH 7
GDY YH
Sbjct: 275 GDYLTYH 281


>sp|Y200_METJA|UNCHARACTERIZED hydrogenase expression/formation protein

Query: 1 GDYFLYH 7
GDY L H
Sbjct: 44 GDYILIH 50


>sp|QUEE_METJA|7-CARBOXY-7-DEAZAGUANINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GDYFLYHKEV 10
G+ LYHK++
Sbjct: 86 GEPLLYHKQI 95


>sp|SPSS2_ARCFU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YFLYHK 8
YFLYH+
Sbjct: 336 YFLYHE 341




9|SequenceR|50|41|GSVSEGDYFL

>sp|HISX_PICTO|HISTIDINOL dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 1 GSVSEGDYFL 10
G V GDYFL
Sbjct: 302 GPVPAGDYFL 311


>sp|Y1416_METJA|UNCHARACTERIZED protein MJ1416|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSVSEGDYFL 10
GS EGD+F+
Sbjct: 85 GSRGEGDFFV 94


>sp|PUR5_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSVSEGDYFL 10
G+V GDY+L
Sbjct: 43 GAVEFGDYYL 52


>sp|GLMS_METTH|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanothermobacter

Query: 3 VSEGDYFL 10
V EG+YFL
Sbjct: 184 VGEGEYFL 191


>sp|NADK_THESM|NAD kinase|Thermococcus sibiricus (strain DSM 12597

Query: 3 VSEGDYFL 10
+ EGDYF+
Sbjct: 109 ILEGDYFI 116


>sp|GUAAA_HALWD|GMP synthase [glutamine-hydrolyzing] subunit A|Haloquadratum walsbyi

Query: 1 GSVSEGDY 8
GSV+ GDY
Sbjct: 87 GSVAAGDY 94


>sp|COBQ_THEGJ|PROBABLE cobyric acid synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GSVSEGDYFL 10
GSVS DY L
Sbjct: 97 GSVSAKDYML 106


>sp|COBQ_THEKO|PROBABLE cobyric acid synthase|Thermococcus kodakarensis (strain ATCC

Query: 1 GSVSEGDYFL 10
GSVS DY L
Sbjct: 97 GSVSARDYML 106


>sp|AATA_NITMS|A-TYPE ATP synthase subunit A|Nitrosopumilus maritimus (strain SCM1)

Query: 3 VSEGDYFL 10
VSEGDY L
Sbjct: 164 VSEGDYDL 171


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 3 VSEGDYFL 10
V EGDY L
Sbjct: 430 VKEGDYIL 437


>sp|Y1844_ARCFU|UNCHARACTERIZED protein AF_1844|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SVSEGDYFL 10
S SEG YF+
Sbjct: 54 STSEGQYFV 62


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SVSEGDYFL 10
+V EGDY L
Sbjct: 186 NVKEGDYIL 194


Query: 1 GSVSEGDYFL 10
GS+ G++FL
Sbjct: 586 GSLGSGNHFL 595


>sp|COBQ_PYRFU|PROBABLE cobyric acid synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GSVSEGDYFL 10
GSVS DY L
Sbjct: 97 GSVSARDYML 106


>sp|Y1314_ARCFU|UNCHARACTERIZED protein AF_1314|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VSEGDYFL 10
V EG YFL
Sbjct: 51 VKEGRYFL 58


>sp|IF2P_PYRFU|PROBABLE translation initiation factor IF-2|Pyrococcus furiosus (strain ATCC

Query: 1 GSVSEGDY 8
G + EGDY
Sbjct: 118 GELKEGDY 125


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 VSEGDYFL 10
V EGDY L
Sbjct: 427 VQEGDYVL 434


>sp|SOXE_SULAC|SULFOCYANIN acidocaldarius (strain ATCC 33909

Query: 1 GSVSEGDYFL 10
G +S GDY L
Sbjct: 160 GPISAGDYML 169


>sp|RS17_NANEQ|SMALL ribosomal subunit protein uS17|Nanoarchaeum equitans (strain

Query: 3 VSEGDYFL 10
+ EGDY L
Sbjct: 79 IKEGDYVL 86


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 VSEGDYFL 10
V EGDY L
Sbjct: 512 VIEGDYIL 519


>sp|G1PDH_HALSA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halobacterium salinarum (strain ATCC 700922

Query: 1 GSVSEGD 7
GSV EGD
Sbjct: 132 GSVPEGD 138


>sp|G1PDH_HALS3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halobacterium salinarum (strain ATCC 29341

Query: 1 GSVSEGD 7
GSV EGD
Sbjct: 132 GSVPEGD 138


>sp|G1PDH_NATPD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GSVSEGD 7
GSV EGD
Sbjct: 132 GSVPEGD 138


>sp|RTCB_THEKO|TRNA-SPLICING ligase RtcB|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GSVSEGDYFL 10
GS+ G++FL
Sbjct: 198 GSLGSGNHFL 207


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GSVSEGDYFL 10
GS+ G++FL
Sbjct: 685 GSLGSGNHFL 694


>sp|RTCB_METMP|TRNA-SPLICING ligase RtcB|Methanococcus maripaludis (strain DSM 14266

Query: 1 GSVSEGDYFL 10
GS+ G++FL
Sbjct: 196 GSLGSGNHFL 205


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSVSEGDYFL 10
GS+ G++FL
Sbjct: 684 GSLGSGNHFL 693


>sp|G1PDH_HALMA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Haloarcula marismortui (strain ATCC 43049

Query: 1 GSVSEGD 7
GSV EGD
Sbjct: 132 GSVPEGD 138




10|SequenceR|55|46|ALNVKGSVSE

>sp|RL4_ARCFU|LARGE ribosomal subunit protein uL4|Archaeoglobus fulgidus (strain ATCC

Query: 2 LNVKGSVSE 10
LN+KG V+E
Sbjct: 6 LNLKGEVTE 14


>sp|PDXT_METS3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanobrevibacter smithii

Query: 2 LNVKGSVSE 10
LN++G+VSE
Sbjct: 7 LNLQGAVSE 15




11|SequenceR|60|51|GPQKFALNVK

>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 1 GPQKFALNVK 10
GP +FAL V+
Sbjct: 409 GPVQFALEVQ 418


>sp|RUBH_METTH|PUTATIVE rubredoxin|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 QKFALNVK 10
+ FALNVK
Sbjct: 110 ENFALNVK 117


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 1 GPQKFALNV 9
GP K A+NV
Sbjct: 269 GPGKVAVNV 277




12|SequenceR|65|56|HELRKGPQKF

>sp|AMTAB_METTH|PROBABLE threonylcarbamoyladenosine tRNA

Query: 1 HELRKGPQ 8
H+LR+ PQ
Sbjct: 101 HQLRRAPQ 108


>sp|G3P_METKA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 HELRKGP 7
H+++KGP
Sbjct: 181 HQVKKGP 187


>sp|CBIF_METJA|COBALT-PRECORRIN-4 C(11)-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 HELRKGPQKF 10
HE RK +KF
Sbjct: 250 HEYRKSHKKF 259


>sp|DPCKG_METAR|GTP-DEPENDENT dephospho-CoA kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 HELRKG 6
HE+RKG
Sbjct: 76 HEVRKG 81


>sp|Y1493_THEPD|UPF0173 metal-dependent hydrolase Tpen_1493|Thermofilum pendens (strain DSM

Query: 2 ELRKGPQKF 10
E+R P+KF
Sbjct: 196 EIRADPEKF 204


>sp|3MGH_METAR|PUTATIVE 3-methyladenine DNA glycosylase|Methanocella arvoryzae (strain DSM

Query: 1 HELRKGPQKF 10
HE+ GP K
Sbjct: 122 HEIASGPGKL 131




13|SequenceR|70|61|IRIGQHELRK

>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IRIGQHEL 8
I+IGQH++
Sbjct: 10 IKIGQHKI 17


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IRIGQHEL 8
I+IGQH++
Sbjct: 11 IKIGQHKV 18


>sp|Y656_PYRAB|UNCHARACTERIZED protein PYRAB06560|Pyrococcus abyssi (strain GE5 /

Query: 1 IRIGQHELRK 10
IRI + E+RK
Sbjct: 47 IRISKEEMRK 56


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IRIGQHEL 8
I+IGQH++
Sbjct: 10 IKIGQHKV 17


>sp|SYFB_SACI6|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IRIGQHELRK 10
+ IG H+LRK
Sbjct: 128 VAIGIHDLRK 137


>sp|SYFB_SACI4|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IRIGQHELRK 10
+ IG H+LRK
Sbjct: 128 VAIGIHDLRK 137


>sp|SYFB_SACI3|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.16.27)

Query: 1 IRIGQHELRK 10
+ IG H+LRK
Sbjct: 128 VAIGIHDLRK 137


>sp|SYFB_SACI2|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IRIGQHELRK 10
+ IG H+LRK
Sbjct: 128 VAIGIHDLRK 137


>sp|SYFB_SACI7|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IRIGQHELRK 10
+ IG H+LRK
Sbjct: 128 VAIGIHDLRK 137


>sp|SYFB_SACI1|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 IRIGQHELRK 10
+ IG H+LRK
Sbjct: 128 VAIGIHDLRK 137


>sp|RS3A_METHJ|SMALL ribosomal subunit protein eS1|Methanospirillum hungatei JF-1

Query: 5 QHELRK 10
QHE+RK
Sbjct: 135 QHEIRK 140


>sp|SYFB_SULTO|PHENYLALANINE--TRNA ligase beta subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IRIGQHELRK 10
I IG H+L+K
Sbjct: 131 IAIGLHDLKK 140


>sp|CIMA_METTH|PUTATIVE (R)-citramalate synthase CimA|Methanothermobacter

Query: 3 IGQHELRK 10
IG H LRK
Sbjct: 317 IGTHALRK 324


>sp|SRP54_THEGJ|SIGNAL recognition particle 54 kDa|Thermococcus gammatolerans (strain DSM

Query: 1 IRIGQHELRK 10
+R+G+ +LR+
Sbjct: 365 VRVGEEKLRR 374




14|SequenceR|75|66|QGVFEIRIGQ

>sp|SYH_METKA|HISTIDINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 GVFEIRIGQ 10
G FE+R+G
Sbjct: 159 GAFEVRVGH 167


>sp|RL3_PICTO|LARGE ribosomal subunit protein uL3|Picrophilus torridus (strain ATCC

Query: 3 VFEIRIG 9
+FEIRIG
Sbjct: 153 IFEIRIG 159


>sp|RPO3_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus shibatae (strain ATCC

Query: 1 QGVFEIRIGQ 10
+GVFE++ G+
Sbjct: 185 EGVFELKDGK 194


>sp|RPO3_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus solfataricus (strain ATCC

Query: 1 QGVFEIRIGQ 10
+GVFE++ G+
Sbjct: 185 EGVFELKDGK 194


>sp|RPO3_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 QGVFEIRIGQ 10
+GVFE++ G+
Sbjct: 185 EGVFELKDGK 194


>sp|RPO3_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain M.16.4

Query: 1 QGVFEIRIGQ 10
+GVFE++ G+
Sbjct: 185 EGVFELKDGK 194


>sp|RPO3_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 QGVFEIRIGQ 10
+GVFE++ G+
Sbjct: 185 EGVFELKDGK 194


>sp|RPO3_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 QGVFEIRIGQ 10
+GVFE++ G+
Sbjct: 185 EGVFELKDGK 194


>sp|RPO3_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 QGVFEIRIGQ 10
+GVFE++ G+
Sbjct: 185 EGVFELKDGK 194


>sp|RPO3_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 QGVFEIRIGQ 10
+GVFE++ G+
Sbjct: 185 EGVFELKDGK 194


>sp|CBIA_SACS2|COBYRINATE a,c-diamide synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 VFEIRIGQ 10
VF++RIG+
Sbjct: 395 VFKVRIGK 402


>sp|RL3_THEVO|LARGE ribosomal subunit protein uL3|Thermoplasma volcanium (strain ATCC

Query: 3 VFEIRIG 9
+FE+RIG
Sbjct: 154 IFELRIG 160


>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 4 FEIRIGQ 10
FE+R+G+
Sbjct: 82 FEVRVGE 88


>sp|RL3_THEAC|LARGE ribosomal subunit protein uL3|Thermoplasma acidophilum (strain ATCC

Query: 3 VFEIRIG 9
+FE+RIG
Sbjct: 154 IFELRIG 160




15|SequenceR|80|71|NFLEIQGVFE

>sp|Y1136_SULTO|PUTATIVE ABC transporter ATP-binding protein|Sulfurisphaera tokodaii

Query: 1 NFLEIQGV 8
NFLEI+G+
Sbjct: 2 NFLEIKGL 9


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 2 FLEIQGVFE 10
F EI+G+FE
Sbjct: 371 FGEIKGLFE 379




16|SequenceR|85|76|TNSKDNFLEI

>sp|GUAAA_METTP|GMP synthase [glutamine-hydrolyzing] subunit A|Methanothrix

Query: 5 DNFLEI 10
DNFLEI
Sbjct: 173 DNFLEI 178


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NSKDNFLEI 10
N +DNFLE+
Sbjct: 616 NWRDNFLEL 624


>sp|SYY_METAC|TYROSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 NSKDNFLEI 10
+SKDNF+ I
Sbjct: 214 SSKDNFISI 222


>sp|RFCS_ARCFU|REPLICATION factor C small subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NSKDNFLEI 10
N +DNF+E+
Sbjct: 66 NWRDNFIEM 74


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 4 KDNFLEI 10
+DNFLE+
Sbjct: 74 RDNFLEL 80


>sp|SYY_METMA|TYROSINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NSKDNFLEI 10
+SKDNF+ +
Sbjct: 214 SSKDNFISV 222


>sp|RS27_METTH|SMALL ribosomal subunit protein eS27|Methanothermobacter

Query: 2 NSKDNFLEI 10
N+K NFL +
Sbjct: 8 NTKGNFLRV 16


>sp|DMRX_METJA|DIHYDROMETHANOPTERIN reductase (acceptor)|Methanocaldococcus jannaschii (strain ATCC

Query: 4 KDNFLEI 10
+DNF+EI
Sbjct: 177 RDNFVEI 183


>sp|RFCS_HALSA|REPLICATION factor C small subunit|Halobacterium salinarum (strain ATCC

Query: 4 KDNFLEI 10
+DNFLE+
Sbjct: 73 QDNFLEL 79


>sp|RFCS_HALS3|REPLICATION factor C small subunit|Halobacterium salinarum (strain ATCC 29341

Query: 4 KDNFLEI 10
+DNFLE+
Sbjct: 73 QDNFLEL 79




17|SequenceR|90|81|NVFEHTNSKD

>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 NVFEHTNSK 9
N+ EHTN K
Sbjct: 1412 NLREHTNKK 1420


>sp|COBD_METM5|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 1 NVFEHTNS 8
NVF+ TNS
Sbjct: 39 NVFKSTNS 46


>sp|GATE_THEGJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus gammatolerans (strain DSM

Query: 1 NVFEHTNSK 9
+VFE+T SK
Sbjct: 288 DVFENTESK 296


>sp|COBD_METMP|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 1 NVFEHTNS 8
NVF+ TNS
Sbjct: 39 NVFKSTNS 46


>sp|COBD_METM7|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 1 NVFEHTNS 8
NVF+ TNS
Sbjct: 39 NVFKSTNS 46


>sp|Y1561_METJA|UNCHARACTERIZED protein MJ1561|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VFEHTNSKD 10
VF+ NSKD
Sbjct: 543 VFKRKNSKD 551




18|SequenceR|95|86|LEKVLNVFEH

>sp|GSA_METLZ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LEKVLNVFEH 10
+EK+++V++H
Sbjct: 402 MEKIISVYQH 411


>sp|MPTA_HALWD|GTP cyclohydrolase MptA|Haloquadratum walsbyi (strain DSM 16790

Query: 2 EKVLNVFEH 10
E+V+N FEH
Sbjct: 261 EQVVNSFEH 269


>sp|MVHG_METTM|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter marburgensis (strain

Query: 2 EKVLNVFEH 10
EK+L+V EH
Sbjct: 27 EKLLDVMEH 35


>sp|MVHG_METTH|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter thermautotrophicus

Query: 2 EKVLNVFEH 10
EK+++V EH
Sbjct: 27 EKIIDVMEH 35


>sp|GATA_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Sulfurisphaera tokodaii (strain DSM

Query: 1 LEKVLNVFE 9
+EKVLN+++
Sbjct: 458 IEKVLNLYD 466


>sp|LEUC2_METKA|3-ISOPROPYLMALATE dehydratase large subunit 2|Methanopyrus kandleri (strain AV19 /

Query: 2 EKVLNVFEH 10
EKV+ +F+H
Sbjct: 56 EKVVLIFDH 64


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 1 LEKVLNVFE 9
LE+VL+++E
Sbjct: 605 LERVLDIYE 613


>sp|SYH_PYRAB|HISTIDINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 LEKVLNVFE 9
+EKVLN+ E
Sbjct: 208 IEKVLNLIE 216


>sp|SYR_METAR|ARGININE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LEKVLNVFEH 10
+ ++LN +EH
Sbjct: 211 ISEILNAYEH 220


>sp|AATA_SACI7|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 KVLNVFEH 10
K++NVFE+
Sbjct: 578 KLINVFEN 585


>sp|EF2_THEAC|ELONGATION factor 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LEKVLNVFEH 10
+EK L + EH
Sbjct: 8 IEKALKIVEH 17


>sp|LEUC_METTH|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanothermobacter

Query: 2 EKVLNVFEH 10
EK++ +F+H
Sbjct: 58 EKIVVIFDH 66


>sp|EF2_THEVO|ELONGATION factor 2|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LEKVLNVFEH 10
+EK L + EH
Sbjct: 8 IEKALRIVEH 17




19|SequenceR|100|91|EGPLALEKVL

>sp|Y1121_PYRAB|UPF0127 protein PYRAB11210|Pyrococcus abyssi (strain GE5 /

Query: 1 EGPLALEKVL 10
EGP+ L KVL
Sbjct: 96 EGPVGLRKVL 105


>sp|EF2_DESMO|ELONGATION factor 2|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 1 EGPLALEKV 9
EGPLA+E V
Sbjct: 574 EGPLAMEPV 582


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 1 EGPLALEKV 9
EGPLA+E V
Sbjct: 576 EGPLAMEPV 584


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 EGPLALEKV 9
EGPLA+E V
Sbjct: 576 EGPLAMEPV 584


>sp|EF2_METM6|ELONGATION factor 2|Methanococcus maripaludis (strain C6 /

Query: 2 GPLALEKV 9
GPLA EKV
Sbjct: 578 GPLAAEKV 585


>sp|EF2_METM7|ELONGATION factor 2|Methanococcus maripaludis (strain C7 /

Query: 2 GPLALEKV 9
GPLA EKV
Sbjct: 578 GPLAAEKV 585


>sp|EF2_METMP|ELONGATION factor 2|Methanococcus maripaludis (strain DSM 14266

Query: 2 GPLALEKV 9
GPLA EKV
Sbjct: 578 GPLAAEKV 585


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 2 GPLALEKV 9
GPLA EKV
Sbjct: 578 GPLAAEKV 585


>sp|Y1319_METJA|UNCHARACTERIZED sodium-dependent transporter MJ1319|Methanocaldococcus jannaschii

Query: 2 GPLALEKV 9
PLALEK+
Sbjct: 74 APLALEKL 81


>sp|EF2_PICTO|ELONGATION factor 2|Picrophilus torridus (strain ATCC 700027

Query: 1 EGPLALEKV 9
+GPLA EKV
Sbjct: 572 KGPLANEKV 580


>sp|EF2_THEAC|ELONGATION factor 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GPLALEKVL 10
GPLA EKV
Sbjct: 573 GPLANEKVF 581


>sp|PRIS_PYRAE|DNA primase small subunit PriS|Pyrobaculum aerophilum (strain ATCC

Query: 1 EGPLALEKV 9
EGP+ EKV
Sbjct: 276 EGPVLFEKV 284


>sp|EF2_THEVO|ELONGATION factor 2|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GPLALEKVL 10
GPLA EKV
Sbjct: 573 GPLANEKVF 581


>sp|CHEB_METBF|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanosarcina barkeri

Query: 2 GPLALEKVL 10
GP ALEK++
Sbjct: 184 GPRALEKLI 192


>sp|CHEB2_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanosarcina mazei

Query: 2 GPLALEKVL 10
GP ALEK++
Sbjct: 187 GPRALEKLI 195


>sp|CHEB2_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanosarcina

Query: 2 GPLALEKVL 10
GP ALEK++
Sbjct: 176 GPRALEKLI 184


>sp|EF2_METTH|ELONGATION factor 2|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GPLALEKVL 10
GP+A EKV+
Sbjct: 572 GPVAKEKVM 580


>sp|Y1493_THEPD|UPF0173 metal-dependent hydrolase Tpen_1493|Thermofilum pendens (strain DSM

Query: 2 GPLALEKV 9
GPLALE +
Sbjct: 100 GPLALEGI 107


>sp|PGK_SULAC|PHOSPHOGLYCERATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GPLALEKV 9
GP A+EK+
Sbjct: 102 GPYAVEKI 109




20|SequenceR|105|96|RSQTLEGPLA

>sp|Y524_METJA|UNCHARACTERIZED protein MJ0524|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SQTLEGPLA 10
SQTL+ PLA
Sbjct: 57 SQTLKTPLA 65




21|SequenceR|110|101|EFDYSRSQTL

>sp|PSA_SULTO|PROTEASOME subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DYSRSQTL 10
DY+RSQ L
Sbjct: 92 DYARSQAL 99


>sp|FBPAP_THEON|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus onnurineus (strain NA1)

Query: 2 FDYSRSQTL 10
FDY+R + L
Sbjct: 325 FDYARQKAL 333


>sp|FBPAP_THEKO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FDYSRSQTL 10
FDY+R + L
Sbjct: 325 FDYARQKAL 333


>sp|AMZA_HALWD|ARCHAEMETZINCIN walsbyi (strain DSM 16790

Query: 2 FDYSRSQ 8
FD+SRSQ
Sbjct: 44 FDHSRSQ 50


>sp|PSA_SULAC|PROTEASOME subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DYSRSQTL 10
DY+RSQ L
Sbjct: 92 DYARSQAL 99


>sp|NPD_SULTO|NAD-DEPENDENT protein deacetylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DYSRSQTL 10
DY +SQTL
Sbjct: 239 DYIKSQTL 246


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 1 EFDYSRSQTL 10
EFDY R T+
Sbjct: 324 EFDYDRLLTV 333


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EFDYSRSQTL 10
EFD SQTL
Sbjct: 325 EFDIDASQTL 334


>sp|MUTS2_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 3 DYSRSQTL 10
DY R QTL
Sbjct: 502 DYQRRQTL 509


>sp|MUTS2_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 3 DYSRSQTL 10
DY R QTL
Sbjct: 502 DYQRRQTL 509


>sp|MUTS_NATPD|DNA mismatch repair protein MutS|Natronomonas pharaonis (strain ATCC

Query: 3 DYSRSQTL 10
DY R QTL
Sbjct: 499 DYQRRQTL 506


>sp|MUTS2_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 3 DYSRSQTL 10
DY R QTL
Sbjct: 516 DYQRRQTL 523


>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila (strain

Query: 3 DYSRSQTL 10
DY R QTL
Sbjct: 477 DYIRKQTL 484




22|SequenceR|115|106|EVQMFEFDYS

>sp|FLAB2_THEKO|FLAGELLIN B2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 MFEFDYS 10
MFE DYS
Sbjct: 327 MFEIDYS 333


>sp|CARB2_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 3 QMFEFDYS 10
Q EFDYS
Sbjct: 99 QGIEFDYS 106


>sp|UVRC_METMP|UVRABC system protein C|Methanococcus maripaludis (strain DSM 14266

Query: 3 QMFEFDYS 10
+ FEFDY+
Sbjct: 268 KYFEFDYT 275


>sp|Y772_METJA|UNCHARACTERIZED protein MJ0772|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EVQMFEFDYS 10
++Q+FEF S
Sbjct: 343 DIQIFEFSKS 352


>sp|PGP_ARCFU|PHOSPHOGLYCOLATE phosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EVQMFEFDY 9
EV++ +F+Y
Sbjct: 98 EVELLDFEY 106




23|SequenceR|120|111|SEYPKEVQMF

>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YPKEVQM 9
YPKE+Q+
Sbjct: 115 YPKEIQL 121


>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 SEYPKEVQ 8
S YP+EV+
Sbjct: 174 SAYPREVE 181


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 SEYPKEVQ 8
S YP+EV+
Sbjct: 174 SAYPREVE 181


>sp|GLYA_HALWD|SERINE hydroxymethyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SEYPKEVQ 8
S YP+EV+
Sbjct: 174 SAYPREVE 181


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 YPKEVQM 9
YPKE+++
Sbjct: 121 YPKEIEL 127


>sp|Y1150_METTH|IRON-SULFUR cluster assembly SufBD family|Methanothermobacter

Query: 2 EYPKEVQ 8
E PKEVQ
Sbjct: 44 EVPKEVQ 50




24|SequenceR|125|116|NAGIYSEYPK

>sp|Y513_METJA|UNCHARACTERIZED protein MJ0513|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GIYSEYPK 10
GIY YPK
Sbjct: 50 GIYEPYPK 57


>sp|Y426_METJA|UNCHARACTERIZED protein MJ0426|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GIYSEYPK 10
GIYSEY K
Sbjct: 14 GIYSEYLK 21


>sp|RS15_METVS|SMALL ribosomal subunit protein uS15|Methanococcus vannielii (strain

Query: 1 NAGIYSEYPK 10
+AG YSE P+
Sbjct: 77 DAGFYSEVPE 86


>sp|RL11_METJA|LARGE ribosomal subunit protein uL11|Methanocaldococcus jannaschii

Query: 1 NAGIYSEYPK 10
+AG+Y EY K
Sbjct: 150 DAGVYDEYFK 159


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 1 NAGIYSEYP 9
N G+Y+ YP
Sbjct: 33 NIGVYAAYP 41


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 1 NAGIYSEYP 9
N G+Y+ YP
Sbjct: 33 NIGVYAAYP 41


>sp|GLCDH_METPS|GLUCOSE 1-dehydrogenase|Methanocella paludicola (strain DSM 17711

Query: 1 NAGIYSEYPK 10
N G+Y E P+
Sbjct: 46 NEGLYGEAPE 55


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NAGIYSEYPK 10
NAG ++ YP+
Sbjct: 387 NAGPFTRYPR 396


>sp|F16A1_HALMA|FRUCTOSE-1,6-BISPHOSPHATASE class 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 3 GIYSEYP 9
GIYSE P
Sbjct: 114 GIYSEQP 120


>sp|ASSY_PICTO|ARGININOSUCCINATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 3 GIYSEYP 9
G+Y EYP
Sbjct: 78 GLYGEYP 84


>sp|SFSA_ARCFU|SUGAR fermentation stimulation protein homolog|Archaeoglobus fulgidus

Query: 3 GIYSEYP 9
GIY+ YP
Sbjct: 131 GIYAMYP 137


>sp|Y326_METJA|PUTATIVE permease MJ0326|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GIYSEYP 9
G+Y+ YP
Sbjct: 70 GLYARYP 76


>sp|GCSPA_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 2 AGIYSEYP 9
A +Y EYP
Sbjct: 217 AALYMEYP 224


>sp|Y903_METJA|UNCHARACTERIZED protein MJ0903|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NAGIYSEYP 9
N+GIYS P
Sbjct: 544 NSGIYSAKP 552


>sp|PURO_METST|IMP cyclohydrolase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 NAGIYSEY 8
N GI+SE+
Sbjct: 173 NGGIFSEF 180


>sp|Y045_METJA|UNCHARACTERIZED protein MJ0045|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 IYSEYPK 10
IY+ YPK
Sbjct: 126 IYTTYPK 132


>sp|RS15_METM7|SMALL ribosomal subunit protein uS15|Methanococcus maripaludis (strain

Query: 2 AGIYSEYPK 10
AG Y+E P+
Sbjct: 78 AGFYTEVPE 86


>sp|RS3_STAMF|SMALL ribosomal subunit protein uS3|Staphylothermus marinus (strain

Query: 4 IYSEYP 9
IY+EYP
Sbjct: 49 IYAEYP 54


>sp|PAIA_THEAC|SPERMIDINE N(1)-acetyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 2 AGIYSE 7
AGIYSE
Sbjct: 29 AGIYSE 34


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AGIYSEYP 9
AGI EYP
Sbjct: 638 AGIAEEYP 645


>sp|SYFA_PYRAR|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 IYSEYPK 10
+Y+E+PK
Sbjct: 401 VYAEHPK 407




25|SequenceR|130|121|YRLRVNAGIY

>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 1 YRLRVNAGI 9
YRLRV +GI
Sbjct: 448 YRLRVGSGI 456


>sp|TRPE2_HALSA|ANTHRANILATE synthase component 1 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 YRLRVNAGI 9
Y LRV AGI
Sbjct: 439 YHLRVGAGI 447


>sp|TRPE1_HALMA|ANTHRANILATE synthase component 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 YRLRVNAGI 9
Y LRV AG+
Sbjct: 441 YHLRVGAGV 449


>sp|MTAD_THEKO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LRVNAGI 9
LR+NAGI
Sbjct: 344 LRLNAGI 350


>sp|MPG1_SULAC|PUTATIVE mannose-1-phosphate guanyltransferase|Sulfolobus acidocaldarius

Query: 5 VNAGIY 10
VNAGIY
Sbjct: 167 VNAGIY 172


>sp|GLMU_METMP|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain DSM 14266

Query: 5 VNAGIY 10
+NAGIY
Sbjct: 157 INAGIY 162


>sp|GLMU_METM7|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain C7 /

Query: 5 VNAGIY 10
+NAGIY
Sbjct: 157 INAGIY 162


>sp|GLMU_METM5|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain C5 /

Query: 5 VNAGIY 10
+NAGIY
Sbjct: 157 INAGIY 162


>sp|GLMU_METJA|BIFUNCTIONAL protein GlmU|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 VNAGIY 10
+NAGIY
Sbjct: 155 INAGIY 160


>sp|GLMU_META3|BIFUNCTIONAL protein GlmU|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 VNAGIY 10
+NAGIY
Sbjct: 157 INAGIY 162


>sp|GLMU_METVS|BIFUNCTIONAL protein GlmU|Methanococcus vannielii (strain ATCC 35089

Query: 5 VNAGIY 10
+NAGIY
Sbjct: 161 INAGIY 166


>sp|S1PNA_SULTO|BIFUNCTIONAL sugar-1-phosphate

Query: 5 VNAGIY 10
+NAGIY
Sbjct: 156 INAGIY 161




26|SequenceR|135|126|TVKLFYRLRV

***** No hits found ******


27|SequenceR|140|131|LRRVITVKLF

>sp|IF2G_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 LRRVITVKL 9
LRR IT+K+
Sbjct: 43 LRRGITIKI 51


>sp|IF2G_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC

Query: 1 LRRVITVKL 9
LRR IT+K+
Sbjct: 43 LRRGITIKI 51


>sp|IF2G_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 LRRVITVKL 9
LRR IT+K+
Sbjct: 43 LRRGITIKI 51


>sp|IF2G_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 1 LRRVITVKL 9
LRR IT+K+
Sbjct: 43 LRRGITIKI 51


>sp|IF2G_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain

Query: 1 LRRVITVKL 9
LRR IT+K+
Sbjct: 43 LRRGITIKI 51




28|SequenceR|145|136|KVLDTLRRVI

>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KVLDTLRRVI 10
++LD+LRR+I
Sbjct: 772 EILDSLRRII 781


>sp|GATA_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 1 KVLDTLRR 8
+VLD LRR
Sbjct: 27 RVLDALRR 34


>sp|GATD_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Archaeoglobus fulgidus (strain ATCC

Query: 3 LDTLRRV 9
+DTLRRV
Sbjct: 334 IDTLRRV 340


>sp|Y366_METJA|UNCHARACTERIZED protein MJ0366|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LDTLRRVI 10
+DTLRR I
Sbjct: 41 IDTLRRAI 48


>sp|SYY_PYRCJ|TYROSINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 LDTLRRV 9
LDT+RRV
Sbjct: 87 LDTIRRV 93


>sp|Y1372_THEGJ|UPF0127 protein TGAM_1372|Thermococcus gammatolerans (strain DSM 15229

Query: 3 LDTLRRVI 10
LD++RRV+
Sbjct: 66 LDSMRRVV 73


>sp|RS8_THEPD|SMALL ribosomal subunit protein uS8|Thermofilum pendens (strain DSM

Query: 2 VLDTLRR 8
VLDTL+R
Sbjct: 36 VLDTLKR 42


>sp|COABC_METJA|COENZYME A biosynthesis bifunctional protein|Methanocaldococcus jannaschii

Query: 1 KVLDTLRRV 9
KVL+ LRR+
Sbjct: 310 KVLEELRRI 318




29|SequenceR|150|141|ILDYEKVLDT

>sp|TFE_NANEQ|TRANSCRIPTION factor E|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 DYEKVLDT 10
DYEK+LDT
Sbjct: 82 DYEKILDT 89


>sp|RL15_META3|LARGE ribosomal subunit protein uL15|Methanococcus aeolicus (strain ATCC

Query: 2 LDYEKVL 8
LDYEKVL
Sbjct: 103 LDYEKVL 109


>sp|PUR2_THEGJ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 DYEKVLDT 10
DYEK L+T
Sbjct: 245 DYEKALET 252


>sp|THII_SACI2|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LDYEKVLD 9
+DYEKVL+
Sbjct: 359 IDYEKVLE 366


>sp|THII_SACI7|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LDYEKVLD 9
+DYEKVL+
Sbjct: 359 IDYEKVLE 366


>sp|THII_SACI1|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LDYEKVLD 9
+DYEKVL+
Sbjct: 359 IDYEKVLE 366


>sp|THII_SACI6|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LDYEKVLD 9
+DYEKVL+
Sbjct: 359 IDYEKVLE 366


>sp|THII_SACI4|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LDYEKVLD 9
+DYEKVL+
Sbjct: 359 IDYEKVLE 366


>sp|THII_SACI3|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain M.16.27)

Query: 2 LDYEKVLD 9
+DYEKVL+
Sbjct: 359 IDYEKVLE 366


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 ILDYEKV 7
ILDYEK+
Sbjct: 375 ILDYEKL 381


>sp|PUR2_THEKO|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 DYEKVLDT 10
DYEK L+T
Sbjct: 244 DYEKALET 251


>sp|PGK_THEAC|PHOSPHOGLYCERATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 DYEKVLD 9
DYEK+LD
Sbjct: 255 DYEKLLD 261


>sp|GLYA_METTP|SERINE hydroxymethyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 1 ILDYEKVLD 9
+LDY ++LD
Sbjct: 149 MLDYSEILD 157


>sp|SYW_PYRFU|TRYPTOPHAN--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DYEKVLD 9
DY+KVLD
Sbjct: 60 DYDKVLD 66


>sp|PURT_IGNH4|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Ignicoccus hospitalis

Query: 1 ILDYEKVLD 9
+LDY++V+D
Sbjct: 62 MLDYDQVVD 70


>sp|GLMM_THEGJ|PROBABLE phosphoglucosamine mutase|Thermococcus gammatolerans (strain DSM

Query: 2 LDYEKVLD 9
DYEK++D
Sbjct: 388 FDYEKLID 395


>sp|NADE_PYRHO|NH(3)-DEPENDENT NAD(+) synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ILDYEKVLD 9
ILDY+KV++
Sbjct: 3 ILDYDKVIE 11


>sp|THII_SACS2|PROBABLE tRNA sulfurtransferase|Saccharolobus solfataricus (strain ATCC

Query: 2 LDYEKVLD 9
+DYEK+L+
Sbjct: 357 VDYEKILE 364


>sp|SYW2_HALSA|TRYPTOPHAN--TRNA ligase 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 LDYEKVL 8
LDYEK+L
Sbjct: 18 LDYEKLL 24


>sp|IF2B_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain

Query: 3 DYEKVLD 9
D+EK+LD
Sbjct: 9 DFEKLLD 15


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILDYEKVLDT 10
I+D EK+LD+
Sbjct: 465 IIDKEKMLDS 474


>sp|SYW_HYPBU|TRYPTOPHAN--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 DYEKVLD 9
DYEK+L+
Sbjct: 57 DYEKILE 63


>sp|AGLM_HALVD|UDP-GLUCOSE 6-dehydrogenase AglM|Haloferax volcanii (strain ATCC 29605

Query: 3 DYEKVLDT 10
DY+++LDT
Sbjct: 68 DYDEILDT 75


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 3 DYEKVLDT 10
DY ++LDT
Sbjct: 501 DYRELLDT 508




30|SequenceR|155|146|ALQHVILDYE

>sp|METK_CALMQ|S-ADENOSYLMETHIONINE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 QHVILDYE 10
QH+++DY+
Sbjct: 131 QHLVIDYK 138


>sp|METK_SACS2|S-ADENOSYLMETHIONINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ALQHVILDYE 10
A +HVI+DY+
Sbjct: 128 AERHVIVDYK 137


>sp|METK_AERPE|S-ADENOSYLMETHIONINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 QHVILDY 9
+HVI+DY
Sbjct: 131 EHVIVDY 137


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 1 ALQHVILDYE 10
+LQH+ DY+
Sbjct: 71 SLQHLSYDYQ 80


>sp|TF2B2_THEVO|TRANSCRIPTION initiation factor IIB 2|Thermoplasma volcanium (strain ATCC 51530

Query: 3 QHVILDYE 10
+H+I DYE
Sbjct: 23 EHLIRDYE 30


>sp|TF2B2_THEAC|TRANSCRIPTION initiation factor IIB 2|Thermoplasma acidophilum (strain ATCC

Query: 3 QHVILDYE 10
+H+I DYE
Sbjct: 17 EHLIRDYE 24


>sp|METK_SULTO|S-ADENOSYLMETHIONINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 QHVILDYE 10
+HVI+DY+
Sbjct: 130 KHVIVDYK 137


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 5 VILDYE 10
VILDYE
Sbjct: 374 VILDYE 379


>sp|SYT_PYRAB|THREONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 LQHVILDYE 10
L+H ++DYE
Sbjct: 212 LEHELVDYE 220


>sp|SYT_PYRHO|THREONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LQHVILDYE 10
L+H ++DYE
Sbjct: 212 LEHELVDYE 220


>sp|SYT_PYRFU|THREONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LQHVILDYE 10
L+H ++DYE
Sbjct: 212 LEHELVDYE 220


>sp|SYT_THEGJ|THREONINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 LQHVILDYE 10
L+H ++DYE
Sbjct: 213 LEHELVDYE 221


>sp|METK_SULAC|S-ADENOSYLMETHIONINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 QHVILDYE 10
+HV++DY+
Sbjct: 131 KHVVVDYK 138


>sp|METK_SACI1|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 ALQHVILDYE 10
A +H+I+DY+
Sbjct: 128 AEKHLIVDYK 137


>sp|METK_SACI7|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 ALQHVILDYE 10
A +H+I+DY+
Sbjct: 128 AEKHLIVDYK 137


>sp|METK_SACI6|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 ALQHVILDYE 10
A +H+I+DY+
Sbjct: 128 AEKHLIVDYK 137


>sp|METK_SACI4|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 ALQHVILDYE 10
A +H+I+DY+
Sbjct: 128 AEKHLIVDYK 137


>sp|METK_SACI3|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 ALQHVILDYE 10
A +H+I+DY+
Sbjct: 128 AEKHLIVDYK 137


>sp|METK_SACI2|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 ALQHVILDYE 10
A +H+I+DY+
Sbjct: 128 AEKHLIVDYK 137


>sp|METK_HYPBU|S-ADENOSYLMETHIONINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 4 HVILDYE 10
H+I+DY+
Sbjct: 133 HIIVDYK 139




31|SequenceR|160|151|VDPYTALQHV

>sp|AROB_PYRFU|3-DEHYDROQUINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DPYTALQ 8
DPYT LQ
Sbjct: 285 DPYTTLQ 291


>sp|Y1289_ARCFU|PUTATIVE GTPase AF_1289|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DPYTALQHV 10
DPYTA + +
Sbjct: 327 DPYTAAEQI 335


>sp|HELS_PYRFU|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VDPYTA 6
+DPYTA
Sbjct: 491 IDPYTA 496


>sp|RS11_METTP|SMALL ribosomal subunit protein uS11|Methanothrix thermoacetophila

Query: 3 PYTALQ 8
PYTA+Q
Sbjct: 49 PYTAMQ 54


>sp|RS11_METMA|SMALL ribosomal subunit protein uS11|Methanosarcina mazei (strain ATCC

Query: 3 PYTALQ 8
PYTA+Q
Sbjct: 49 PYTAMQ 54


>sp|RS11_METBU|SMALL ribosomal subunit protein uS11|Methanococcoides burtonii (strain

Query: 3 PYTALQ 8
PYTA+Q
Sbjct: 49 PYTAMQ 54


>sp|RS11_METAC|SMALL ribosomal subunit protein uS11|Methanosarcina acetivorans (strain

Query: 3 PYTALQ 8
PYTA+Q
Sbjct: 49 PYTAMQ 54


>sp|RS11_METBF|SMALL ribosomal subunit protein uS11|Methanosarcina barkeri (strain

Query: 3 PYTALQ 8
PYTA+Q
Sbjct: 49 PYTAMQ 54


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 VDPYTALQHV 10
++ YTAL HV
Sbjct: 316 INLYTALDHV 325


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 1 VDPYTALQH 9
++P+ LQH
Sbjct: 901 IEPFEELQH 909


>sp|PDXT_PYRCJ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum calidifontis (strain

Query: 1 VDPYTALQHV 10
V+P +L+HV
Sbjct: 152 VEPLASLRHV 161


>sp|DHAS_METJA|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YTALQH 9
YTAL+H
Sbjct: 327 YTALEH 332


>sp|Y3527_METJA|UNCHARACTERIZED protein MJECL27|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DPYTALQHV 10
DPYT L V
Sbjct: 130 DPYTVLVDV 138




32|SequenceR|165|156|KISNNVDPYT

>sp|Y202_METJA|UNCHARACTERIZED protein MJ0202|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KISNNVDPY 9
KISNN DPY
Sbjct: 75 KISNNNDPY 83


>sp|CAS1A_SACS2|CRISPR-ASSOCIATED endonuclease Cas1 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KISNNVDPY 9
++S+N+DP+
Sbjct: 234 RVSDNLDPF 242


>sp|TIAS_THEGJ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus gammatolerans

Query: 4 NNVDPY 9
+NVDPY
Sbjct: 194 DNVDPY 199


>sp|Y640_PYRHO|PUTATIVE phosphate permease PH0640|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 NVDPY 9
NVDPY
Sbjct: 234 NVDPY 238


>sp|RS13_METMJ|SMALL ribosomal subunit protein uS13|Methanoculleus marisnigri (strain

Query: 1 KISNNVDPYT 10
+I+N VD YT
Sbjct: 63 RIANAVDTYT 72


>sp|TRPD_HALWD|ANTHRANILATE phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 ISNNVDPYT 10
I +NVD YT
Sbjct: 238 IGDNVDGYT 246


>sp|PYRH_METMJ|URIDYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 SNNVDPY 9
SNN+D Y
Sbjct: 19 SNNIDRY 25


>sp|ARGC_METS3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 ISNNVDPY 9
I++NV+PY
Sbjct: 189 IADNVNPY 196




33|SequenceR|170|161|IGVEMKISNN

>sp|RNP1_METMA|RIBONUCLEASE P protein component 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IGVEMKISNN 10
IG+E+K+SN+
Sbjct: 18 IGLEIKVSNS 27


>sp|KHSE_PYRAE|HOMOSERINE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GVEMKISNN 10
GVE+++ NN
Sbjct: 69 GVEVEVENN 77




34|SequenceR|175|166|HLCDEIGVEM

>sp|AOR_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus furiosus (strain ATCC

Query: 1 HLCDEIGVE 9
H+CDE+G++
Sbjct: 335 HMCDELGLD 343


>sp|PYRH_METST|URIDYLATE kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LCDEIGVEM 10
+CDEIG+++
Sbjct: 63 ICDEIGIQV 71


>sp|WECC_METMP|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LCDEIGVEM 10
+CDEIGV +
Sbjct: 227 ICDEIGVNV 235


>sp|WECC_METVS|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LCDEIGVEM 10
+CDEIGV +
Sbjct: 227 ICDEIGVNV 235


>sp|WECC_METM5|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 2 LCDEIGVEM 10
+CDEIGV +
Sbjct: 227 ICDEIGVNV 235


>sp|WECC_METM7|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 2 LCDEIGVEM 10
+CDEIGV +
Sbjct: 227 ICDEIGVNV 235


>sp|AOR_THEKO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Thermococcus kodakarensis

Query: 1 HLCDEIGVE 9
H CDE G++
Sbjct: 335 HQCDEFGLD 343


>sp|PYRH_METVS|URIDYLATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LCDEIGV 8
+CDEIG+
Sbjct: 65 VCDEIGI 71


>sp|PGP_METS3|PHOSPHOGLYCOLATE phosphatase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 HLCDEIGVEM 10
+LC+E G++M
Sbjct: 168 YLCNENGIDM 177


>sp|PYRH_METS3|URIDYLATE kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 CDEIGVEM 10
CD+IG+E+
Sbjct: 64 CDDIGIEV 71


>sp|PYRH_METM7|URIDYLATE kinase|Methanococcus maripaludis (strain C7 /

Query: 2 LCDEIGV 8
CDEIG+
Sbjct: 65 FCDEIGI 71


>sp|PYRH_META3|URIDYLATE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LCDEIGV 8
CDEIG+
Sbjct: 65 FCDEIGI 71


>sp|PYRH_METMP|URIDYLATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LCDEIGV 8
CDEIG+
Sbjct: 65 FCDEIGI 71


>sp|AKSA_METKA|HOMOCITRATE synthase AksA|Methanopyrus kandleri (strain AV19 /

Query: 1 HLCDEIGVEM 10
HL DE+GV+
Sbjct: 47 HLLDELGVQQ 56


>sp|Y199_HALMA|PUTATIVE transcriptional regulatory protein rrnAC0199|Haloarcula marismortui

Query: 3 CDEIGVEM 10
CDE GVE+
Sbjct: 103 CDEAGVEV 110


>sp|PYRH_METM5|URIDYLATE kinase|Methanococcus maripaludis (strain C5 /

Query: 2 LCDEIGV 8
CDEIG+
Sbjct: 65 FCDEIGI 71


>sp|PYRH_METBF|URIDYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 3 CDEIGVEM 10
CD IG+E+
Sbjct: 64 CDYIGIEI 71


>sp|PYRH_METM6|URIDYLATE kinase|Methanococcus maripaludis (strain C6 /

Query: 2 LCDEIGV 8
CDEIG+
Sbjct: 65 FCDEIGI 71


>sp|PYRH_METMA|URIDYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CDEIGVEM 10
CD IG+E+
Sbjct: 64 CDYIGIEI 71


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 HLCDEI 6
HLC+EI
Sbjct: 777 HLCEEI 782


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HLCDEI 6
HLC+EI
Sbjct: 777 HLCEEI 782


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 HLCDEI 6
HLC+EI
Sbjct: 801 HLCEEI 806


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 2 LCDEIGVEM 10
LC E+G+E+
Sbjct: 482 LCSELGIEL 490


>sp|SRP54_METAR|SIGNAL recognition particle 54 kDa|Methanocella arvoryzae (strain DSM

Query: 1 HLCDEIGV 8
LCD++GV
Sbjct: 146 QLCDKLGV 153


>sp|PYRH_METTP|URIDYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LCDEIGV 8
LCD IG+
Sbjct: 62 LCDSIGI 68


>sp|ILVC_METPE|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaerula palustris (strain ATCC

Query: 1 HLCDEIGVEM 10
HL +E+G E+
Sbjct: 311 HLLEEVGAEI 320


>sp|FOLD2_HALMA|BIFUNCTIONAL protein FolD 2|Haloarcula marismortui (strain ATCC 43049

Query: 3 CDEIGVE 9
C+EIG+E
Sbjct: 56 CNEIGIE 62


>sp|SYW_METMA|TRYPTOPHAN--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CDEIGVE 9
C EIGVE
Sbjct: 119 CREIGVE 125


>sp|CSG_HALVD|CELL surface glycoprotein|Haloferax volcanii (strain ATCC 29605

Query: 4 DEIGVEM 10
DEIG+E+
Sbjct: 243 DEIGIEL 249


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 HLCDEI 6
HLC+EI
Sbjct: 787 HLCEEI 792


>sp|PYRH_METTH|URIDYLATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 CDEIGVEM 10
CD+IG+++
Sbjct: 64 CDDIGIDV 71


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 HLCDEI 6
HLC+EI
Sbjct: 790 HLCEEI 795


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 HLCDEI 6
HLC+EI
Sbjct: 790 HLCEEI 795


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 HLCDEI 6
HLC+EI
Sbjct: 790 HLCEEI 795


>sp|ILVC_METLZ|KETOL-ACID reductoisomerase (NADP(+))|Methanocorpusculum labreanum (strain

Query: 1 HLCDEIGVEM 10
HL +E+G E+
Sbjct: 311 HLIEEVGSEL 320


>sp|FOLD_NATPD|BIFUNCTIONAL protein FolD|Natronomonas pharaonis (strain ATCC 35678

Query: 3 CDEIGVE 9
C+E+G+E
Sbjct: 56 CEEVGIE 62


>sp|UPPS_HALMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Haloarcula

Query: 3 CDEIGV 8
CDE+G+
Sbjct: 64 CDELGI 69


>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum labreanum

Query: 1 HLCDEIGVE 9
H+C GVE
Sbjct: 255 HICPHCGVE 263


>sp|MFNA_METMJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoculleus marisnigri

Query: 3 CDEIGVEM 10
CD +G+EM
Sbjct: 125 CDILGLEM 132


>sp|GLYA_METAR|SERINE hydroxymethyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LCDEIGVEM 10
+CDE+G +
Sbjct: 184 VCDEVGASI 192


>sp|SYW_METAC|TRYPTOPHAN--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 CDEIGVE 9
C EIGVE
Sbjct: 119 CREIGVE 125


>sp|PRIL_PYRFU|DNA primase large subunit PriL|Pyrococcus furiosus (strain ATCC 43587

Query: 4 DEIGVEM 10
DEIG+E+
Sbjct: 103 DEIGIEV 109


>sp|ILVC_METHJ|KETOL-ACID reductoisomerase (NADP(+))|Methanospirillum hungatei JF-1 (strain

Query: 1 HLCDEIGVEM 10
HL +E+G E+
Sbjct: 311 HLIEEVGKEI 320


>sp|TRPA_HALVD|TRYPTOPHAN synthase alpha chain|Haloferax volcanii (strain ATCC 29605

Query: 3 CDEIGVEM 10
CDE G+++
Sbjct: 138 CDEFGLDL 145


>sp|GGGPS_PYRHO|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LCDEIGVE 9
+C+E+GV+
Sbjct: 43 VCEELGVD 50


>sp|TRUA_PYRCJ|TRNA pseudouridine synthase A|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 DEIGVEM 10
DE+GVE+
Sbjct: 140 DEVGVEV 146


>sp|MTRB_META3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 2 LCDEIGVEM 10
+C EIG+ M
Sbjct: 6 ICPEIGIVM 14


>sp|COFD_METPE|2-PHOSPHO-L-LACTATE transferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 HLCDEIGVE 9
HLC GV+
Sbjct: 116 HLCRSFGVK 124


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 HLCDEI 6
H+C+EI
Sbjct: 773 HICEEI 778


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 HLCDEI 6
H+C+EI
Sbjct: 776 HICEEI 781


>sp|GLPA1_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A1|Haloferax volcanii

Query: 1 HLCDEIGVE 9
H+C+++GV+
Sbjct: 373 HVCEKLGVD 381


>sp|PYRH_METJA|URIDYLATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LCDEIGV 8
CDE+G+
Sbjct: 66 FCDELGI 72


>sp|MFNA_METPE|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaerula palustris

Query: 3 CDEIGVEM 10
CD +G++M
Sbjct: 125 CDILGIQM 132


>sp|ILVC_METMJ|KETOL-ACID reductoisomerase (NADP(+))|Methanoculleus marisnigri (strain ATCC

Query: 1 HLCDEIGVEM 10
HL +++G E+
Sbjct: 311 HLIEQVGAEI 320


>sp|TF2B_METKA|TRANSCRIPTION initiation factor IIB|Methanopyrus kandleri (strain AV19 /

Query: 2 LCDEIGVEM 10
+C+ +G+E+
Sbjct: 297 ICEALGIEL 305


>sp|GLPA2_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A2|Haloferax volcanii

Query: 1 HLCDEIGVE 9
H+C+ +GVE
Sbjct: 370 HVCEVLGVE 378


>sp|NIFH_METMP|NITROGENASE iron protein|Methanococcus maripaludis (strain DSM 14266

Query: 2 LCDEIGVEM 10
CD+IG ++
Sbjct: 199 FCDKIGTQL 207


>sp|NIFH_METMI|NITROGENASE iron protein|Methanococcus maripaludis (Methanococcus deltae)

Query: 2 LCDEIGVEM 10
CD+IG ++
Sbjct: 199 FCDKIGTQL 207


>sp|PANB_NITMS|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 LCDEIGVEM 10
LCD+ G+++
Sbjct: 31 LCDKAGIDV 39


>sp|ILVC_METTP|KETOL-ACID reductoisomerase (NADP(+))|Methanothrix thermoacetophila (strain

Query: 1 HLCDEIGVEM 10
HL +++G E+
Sbjct: 312 HLIEKVGAEL 321




35|SequenceR|180|171|YEFEIHLCDE

>sp|PURT_META3|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus aeolicus

Query: 2 EFEIHL 7
EFEIHL
Sbjct: 300 EFEIHL 305


>sp|PYRC_METST|DIHYDROOROTASE stadtmanae (strain ATCC 43021

Query: 1 YEFEIHLC 8
Y+ ++HLC
Sbjct: 221 YKLQLHLC 228


>sp|METK_CALMQ|S-ADENOSYLMETHIONINE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 YEFEIHL 7
YE E+HL
Sbjct: 256 YEVEVHL 262


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 5 IHLCD 9
IHLCD
Sbjct: 788 IHLCD 792


>sp|METK_METJA|S-ADENOSYLMETHIONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YEFEIHL 7
YE EIH+
Sbjct: 255 YEVEIHI 261


>sp|Y085_ARCFU|UNCHARACTERIZED protein AF_0085|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YEFEIHLC 8
Y E+HLC
Sbjct: 48 YLAELHLC 55


>sp|AGLC_METVO|DOLICHYL N-acetyl-alpha-D-glucosaminyl phosphate

Query: 1 YEFEIHLCDE 10
+EF +HL E
Sbjct: 192 FEFNLHLIKE 201


>sp|GLNA2_HALMT|GAMMA-GLUTAMYLPUTRESCINE synthetase|Haloferax mediterranei (strain ATCC 33500

Query: 4 EIHLCDE 10
E+HLC +
Sbjct: 74 EVHLCPD 80


>sp|Y883_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 3 FEIHLC 8
F IHLC
Sbjct: 85 FPIHLC 90




36|SequenceR|185|176|YKSKNYEFEI

>sp|RS6E_METBU|SMALL ribosomal subunit protein eS6|Methanococcoides burtonii (strain

Query: 2 KSKNYEFEI 10
K+K Y+F+I
Sbjct: 12 KTKTYQFDI 20


>sp|Y300_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0300|Methanocaldococcus

Query: 2 KSKNYEFEI 10
K+KNYE+ I
Sbjct: 152 KNKNYEYTI 160


>sp|Y367_PYRAB|PUTATIVE HTH-type transcriptional regulatory protein|Pyrococcus abyssi

Query: 1 YKSKNYEFE 9
++KNYE E
Sbjct: 77 LRTKNYEME 85


>sp|GATE_DESA1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Desulfurococcus amylolyticus (strain

Query: 2 KSKNYEFE 9
K+K YE+E
Sbjct: 68 KNKKYEYE 75


>sp|SRP19_SACS2|SIGNAL recognition particle 19 kDa|Saccharolobus solfataricus (strain

Query: 2 KSKNYEFEI 10
KSKNY +I
Sbjct: 77 KSKNYTLKI 85




37|SequenceR|190|181|VDKLHYKSKN

>sp|Y1567_METJA|UNCHARACTERIZED protein MJ1567|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDKLHYKSK 9
+DK+ YKSK
Sbjct: 154 IDKISYKSK 162


>sp|SUMT_METIV|UROPORPHYRINOGEN-III C-methyltransferase|Methanobacterium ivanovii

Query: 5 HYKSKN 10
HYKS+N
Sbjct: 59 HYKSQN 64


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VDKLHYKSK 9
++K HYK K
Sbjct: 658 IEKFHYKGK 666


>sp|FKBPL_METTH|LONG-TYPE peptidyl-prolyl cis-trans isomerase|Methanothermobacter

Query: 3 KLHYKSKN 10
+LHY S+N
Sbjct: 163 QLHYPSQN 170


>sp|CIMA_METJA|(R)-CITRAMALATE synthase CimA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KLHYKSKN 10
KLHYK ++
Sbjct: 397 KLHYKGED 404


>sp|METE_PYRAB|METHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 VDKLHYK 7
VDKL YK
Sbjct: 101 VDKLEYK 107




38|SequenceR|195|186|IKGVIVDKLH

>sp|PFDA_PYRHO|PREFOLDIN subunit alpha|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IKGVIVDK 8
+KGVIVDK
Sbjct: 69 LKGVIVDK 76


>sp|RL2_STAMF|LARGE ribosomal subunit protein uL2|Staphylothermus marinus (strain

Query: 1 IKGVIVDKLH 10
IKG I+D LH
Sbjct: 39 IKGKIIDLLH 48


>sp|THSA_HALSA|THERMOSOME subunit alpha|Halobacterium salinarum (strain ATCC 700922

Query: 1 IKGVIVDK 8
I+GVIVDK
Sbjct: 213 IEGVIVDK 220


>sp|PFDA_THEON|PREFOLDIN subunit alpha|Thermococcus onnurineus (strain NA1)

Query: 1 IKGVIVDK 8
+KG+IVDK
Sbjct: 69 LKGMIVDK 76


>sp|PFDA_PYRAB|PREFOLDIN subunit alpha|Pyrococcus abyssi (strain GE5 /

Query: 1 IKGVIVDK 8
+KG+IVDK
Sbjct: 69 LKGIIVDK 76


>sp|THSB_THEKO|CHAPERONIN subunit beta|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IKGVIVDK 8
IKGV++DK
Sbjct: 216 IKGVVIDK 223


>sp|THSB_THEK1|CHAPERONIN subunit beta|Thermococcus sp. (strain JCM 11816

Query: 1 IKGVIVDK 8
IKGV++DK
Sbjct: 216 IKGVVIDK 223


>sp|THSB_THEK8|CHAPERONIN subunit beta|Thermococcus sp. (strain KS-8)

Query: 1 IKGVIVDK 8
IKGV++DK
Sbjct: 216 IKGVVIDK 223


>sp|THS_METMP|CHAPERONIN subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 IKGVIVDK 8
IKGV+VDK
Sbjct: 209 IKGVLVDK 216


>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKGVIVDKLH 10
IK VIVD++H
Sbjct: 175 IKYVIVDEIH 184


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IKGVIVDKLH 10
+K VIVD++H
Sbjct: 169 VKWVIVDEIH 178


>sp|SUCC_PYRAE|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum aerophilum (strain

Query: 1 IKGVIVDKLH 10
IKG+IV KL+
Sbjct: 80 IKGLIVKKLY 89


>sp|ENGB_METMA|PROBABLE GTP-binding protein EngB|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IKGVIVDKLH 10
+KG++ D+LH
Sbjct: 189 LKGLLRDRLH 198


>sp|ENGB_METBF|PROBABLE GTP-binding protein EngB|Methanosarcina barkeri (strain Fusaro /

Query: 1 IKGVIVDKLH 10
+KG++ D+LH
Sbjct: 189 LKGLLRDRLH 198


>sp|LYSZ_CENSY|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Cenarchaeum symbiosum

Query: 1 IKGVIVDKLH 10
I G IVD LH
Sbjct: 6 IGGSIVDSLH 15


>sp|THS1_HALVD|CHAPERONIN subunit CTT1|Haloferax volcanii (strain ATCC 29605

Query: 1 IKGVIVDK 8
++GVIVDK
Sbjct: 214 VEGVIVDK 221


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IKGVIVDKLH 10
+K +IVD++H
Sbjct: 167 VKWIIVDEIH 176


>sp|RL2_METTH|LARGE ribosomal subunit protein uL2|Methanothermobacter

Query: 1 IKGVIVDKLH 10
+KG +VD +H
Sbjct: 42 LKGKVVDIMH 51


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 1 IKGVIVDKLH 10
++ VIVD++H
Sbjct: 172 VRYVIVDEIH 181


>sp|RL10_SULTO|LARGE ribosomal subunit protein uL10|Sulfurisphaera tokodaii (strain

Query: 1 IKGVIVDKLH 10
I+G DKLH
Sbjct: 36 IEGFPADKLH 45


>sp|THS_PYRHO|THERMOSOME subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IKGVIVDK 8
I+GV++DK
Sbjct: 216 IRGVVIDK 223


>sp|THS_METJA|THERMOSOME subunit|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKGVIVDK 8
I+GV++DK
Sbjct: 213 IRGVVIDK 220


>sp|THS_DESSY|THERMOSOME subunit|Desulfurococcus sp. (strain SY)

Query: 1 IKGVIVDK 8
I+GV++DK
Sbjct: 216 IRGVVIDK 223


>sp|THS_PYRAB|THERMOSOME subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 IKGVIVDK 8
I+GV++DK
Sbjct: 216 IRGVVIDK 223


>sp|SUCC_PYRIL|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum islandicum (strain

Query: 1 IKGVIVDKLH 10
IKG++V KL+
Sbjct: 80 IKGLVVRKLY 89


>sp|THSB_THEAC|THERMOSOME subunit beta|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IKGVIVDK 8
I G+IVDK
Sbjct: 214 INGIIVDK 221


>sp|SYFB_METJA|PHENYLALANINE--TRNA ligase beta subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IKGVIVD 7
+KGVIVD
Sbjct: 106 VKGVIVD 112




39|SequenceR|200|191|VLLFYIKGVI

>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 LLFYIKGV 9
LLF IKG+
Sbjct: 34 LLFAIKGI 41


>sp|TIAS_SACI2|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Saccharolobus islandicus

Query: 4 FYIKGVI 10
FYIKG++
Sbjct: 118 FYIKGIL 124


>sp|RFCS_PYRCJ|REPLICATION factor C small subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 LFYIKGV 9
L YIKGV
Sbjct: 252 LMYIKGV 258


>sp|FPRA_METAZ|COENZYME F420H(2) oxidase|Methanobrevibacter arboriphilus

Query: 2 LLFYIKGV 9
L++Y+KG+
Sbjct: 333 LMYYLKGL 340




40|SequenceR|205|196|QIKIRVLLFY

>sp|TDXH_METMA|PEROXIREDOXIN mazei (strain ATCC BAA-159

Query: 1 QIKIRVLLFY 10
+ KIR +L+Y
Sbjct: 135 EAKIRTILYY 144




41|SequenceR|210|201|QLEMHQIKIR

>sp|OGT_METVM|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanocaldococcus vulcanius (strain ATCC 700851

Query: 2 LEMHQIKIR 10
LEM QIK R
Sbjct: 151 LEMEQIKKR 159


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 EMHQIKIR 10
E+H++K++
Sbjct: 305 ELHEVKVK 312




42|SequenceR|215|206|EKKILQLEMH

>sp|SYE_METJA|GLUTAMATE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EKKILQLEMH 10
EKK+L+L MH
Sbjct: 414 EKKVLKLRMH 423


>sp|NADK_METMA|NAD kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 KILQLEMH 10
KI+Q E+H
Sbjct: 161 KIIQFEVH 168


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KKILQLEMH 10
KKI+ LE H
Sbjct: 183 KKIIDLENH 191


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EKKILQLEMH 10
+KK++ LEM
Sbjct: 796 QKKVVDLEMQ 805




43|SequenceR|220|211|GIGTIEKKIL

>sp|HEM1_METBU|GLUTAMYL-TRNA reductase|Methanococcoides burtonii (strain DSM 6242

Query: 2 IGTIEKKIL 10
IG IE+K+L
Sbjct: 363 IGEIERKVL 371


>sp|RL18E_PYRAB|LARGE ribosomal subunit protein eL18|Pyrococcus abyssi (strain GE5 /

Query: 1 GIGTIEKKIL 10
G G IEKK++
Sbjct: 70 GAGKIEKKVI 79




44|SequenceR|225|216|TTTSPGIGTI

>sp|TRUD_PYRFU|PROBABLE tRNA pseudouridine synthase D|Pyrococcus furiosus (strain ATCC

Query: 2 TTSPGIG 8
TTSPGIG
Sbjct: 12 TTSPGIG 18


>sp|IF2P_METLZ|PROBABLE translation initiation factor IF-2|Methanocorpusculum labreanum

Query: 1 TTTSPGIGTI 10
TT+ PG+GT+
Sbjct: 226 TTSGPGVGTV 235


>sp|TRUD_PYRHO|PROBABLE tRNA pseudouridine synthase D|Pyrococcus horikoshii (strain ATCC

Query: 2 TTSPGIG 8
T+SPGIG
Sbjct: 13 TSSPGIG 19


>sp|IF2P_HALMA|PROBABLE translation initiation factor IF-2|Haloarcula marismortui (strain

Query: 2 TTSPGIGTI 10
T+ PG+GT+
Sbjct: 237 TSGPGVGTV 245


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 2 TTSPGIGTI 10
TT PG+G I
Sbjct: 550 TTDPGMGVI 558


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 2 TTSPGIGTI 10
TT PG+G I
Sbjct: 550 TTDPGMGVI 558


>sp|IF2P_METAR|PROBABLE translation initiation factor IF-2|Methanocella arvoryzae (strain

Query: 2 TTSPGIGTI 10
T PG+GTI
Sbjct: 233 VTGPGVGTI 241


>sp|RSMA_METTH|PROBABLE ribosomal RNA small subunit|Methanothermobacter

Query: 5 PGIGTI 10
PGIGT+
Sbjct: 54 PGIGTL 59


>sp|COFG_METS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 TTSPGI 7
TTSPGI
Sbjct: 219 TTSPGI 224


>sp|Y1656_METJA|UNCHARACTERIZED protein MJ1656|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TTTSPGIGTI 10
T T PG+G +
Sbjct: 204 TGTPPGVGEL 213


>sp|AROK_METVS|SHIKIMATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 TTTSPGIGTI 10
+ SPG GTI
Sbjct: 4 SAISPGSGTI 13


>sp|PYRF_THEAC|OROTIDINE 5'-phosphate decarboxylase|Thermoplasma acidophilum (strain ATCC

Query: 1 TTTSPGIGT 9
T SPGIG+
Sbjct: 160 TIMSPGIGS 168


>sp|IF2P_METTP|PROBABLE translation initiation factor IF-2|Methanothrix thermoacetophila

Query: 2 TTSPGIGTI 10
++ PG+GTI
Sbjct: 240 SSRPGMGTI 248


>sp|IF2P_METAC|PROBABLE translation initiation factor IF-2|Methanosarcina acetivorans

Query: 1 TTTSPGIGTI 10
+ +PG+GT+
Sbjct: 235 SAKNPGVGTV 244




45|SequenceR|230|221|ITETETTTSP

>sp|RNFD_METAC|ION-TRANSLOCATING oxidoreductase complex subunit D|Methanosarcina acetivorans (strain

Query: 4 TETTTSP 10
TET TSP
Sbjct: 222 TETVTSP 228




46|SequenceR|235|226|IEYKAITETE

>sp|PYRG_PYRFU|CTP synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EYKAITET 9
+YKA+TET
Sbjct: 281 KYKALTET 288


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IEYKAITETE 10
I+Y+ I ETE
Sbjct: 789 IQYRRIVETE 798


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IEYKAITETE 10
I+Y+ I ETE
Sbjct: 789 IQYRRIIETE 798


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IEYKAITETE 10
I+Y+ I ETE
Sbjct: 789 IQYRRIIETE 798


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IEYKAITETE 10
I+Y+ I ETE
Sbjct: 789 IQYRRIIETE 798


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 IEYKAITETE 10
I+Y+ I ETE
Sbjct: 789 IQYRRIIETE 798


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IEYKAITETE 10
I+Y+ I ETE
Sbjct: 789 IQYRRIIETE 798


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 IEYKAITETE 10
I+Y+ I ETE
Sbjct: 789 IQYRRIIETE 798


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 IEYKAITE 8
I+YKAI E
Sbjct: 819 IDYKAINE 826


>sp|DNAK_HALMA|CHAPERONE protein DnaK|Haloarcula marismortui (strain ATCC 43049

Query: 2 EYKAITET 9
+Y+A+TET
Sbjct: 558 DYEAVTET 565




47|SequenceR|240|231|PAGDMIEYKA

>sp|PSA_METS3|PROTEASOME subunit alpha|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PAGDMIEYKA 10
P+G +IEYKA
Sbjct: 154 PSGALIEYKA 163


>sp|PSA_METVS|PROTEASOME subunit alpha|Methanococcus vannielii (strain ATCC 35089

Query: 1 PAGDMIEYKA 10
P+G +IEYKA
Sbjct: 155 PSGALIEYKA 164


>sp|PSA_METMP|PROTEASOME subunit alpha|Methanococcus maripaludis (strain DSM 14266

Query: 1 PAGDMIEYKA 10
P+G +IEYKA
Sbjct: 155 PSGALIEYKA 164


>sp|PSA_METM6|PROTEASOME subunit alpha|Methanococcus maripaludis (strain C6 /

Query: 1 PAGDMIEYKA 10
P+G +IEYKA
Sbjct: 155 PSGALIEYKA 164


>sp|PSA_METM5|PROTEASOME subunit alpha|Methanococcus maripaludis (strain C5 /

Query: 1 PAGDMIEYKA 10
P+G +IEYKA
Sbjct: 155 PSGALIEYKA 164


>sp|PSA_METM7|PROTEASOME subunit alpha|Methanococcus maripaludis (strain C7 /

Query: 1 PAGDMIEYKA 10
P+G +IEYKA
Sbjct: 155 PSGALIEYKA 164


>sp|PSA_METJA|PROTEASOME subunit alpha|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PAGDMIEYKA 10
P+G +IEYKA
Sbjct: 154 PSGALIEYKA 163


>sp|PSA_METTH|PROTEASOME subunit alpha|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PAGDMIEYKA 10
P+G +IEYKA
Sbjct: 154 PSGALIEYKA 163


>sp|PSA_METB6|PROTEASOME subunit alpha|Methanoregula boonei (strain DSM 21154

Query: 1 PAGDMIEYKA 10
P+G ++EYKA
Sbjct: 154 PSGTLLEYKA 163


>sp|PSA_METMJ|PROTEASOME subunit alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PAGDMIEYKA 10
P+G ++EYKA
Sbjct: 154 PSGTLLEYKA 163


>sp|PSA_METPE|PROTEASOME subunit alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PAGDMIEYKA 10
P+G ++EYKA
Sbjct: 154 PSGTLLEYKA 163


>sp|PSA_METBF|PROTEASOME subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 1 PAGDMIEYKA 10
P+G ++EYKA
Sbjct: 154 PSGALLEYKA 163


>sp|PSA_METTE|PROTEASOME subunit alpha|Methanosarcina thermophila

Query: 1 PAGDMIEYKA 10
P+G ++EYKA
Sbjct: 152 PSGALLEYKA 161


>sp|PSA_METAC|PROTEASOME subunit alpha|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PAGDMIEYKA 10
P+G ++EYKA
Sbjct: 152 PSGALLEYKA 161


>sp|PSA_METMA|PROTEASOME subunit alpha|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PAGDMIEYKA 10
P+G ++EYKA
Sbjct: 154 PSGALLEYKA 163


>sp|PSA_ARCFU|PROTEASOME subunit alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PAGDMIEYKA 10
P+G ++EYKA
Sbjct: 152 PSGALLEYKA 161


>sp|PSA_THEAC|PROTEASOME subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PAGDMIEYKA 10
PAG + EYKA
Sbjct: 153 PAGTINEYKA 162


>sp|PSA_THEVO|PROTEASOME subunit alpha|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PAGDMIEYKA 10
PAG + EYKA
Sbjct: 153 PAGTINEYKA 162


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GDMIEYKA 10
G+MIEYK
Sbjct: 155 GEMIEYKG 162


>sp|GATD_THEPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermofilum pendens (strain DSM 2475

Query: 1 PAGDMIEYKA 10
PAGDMI A
Sbjct: 399 PAGDMIPETA 408


>sp|PURP_METTP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothrix thermoacetophila (strain

Query: 1 PAGDMIEY 8
P G M+EY
Sbjct: 91 PHGSMVEY 98


>sp|ENDA_SACS2|TRNA-SPLICING endonuclease|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GDMIEYK 9
GD++EYK
Sbjct: 70 GDLLEYK 76


>sp|RS3_STAMF|SMALL ribosomal subunit protein uS3|Staphylothermus marinus (strain ATCC

Query: 2 AGDMIEY 8
AGDM++Y
Sbjct: 157 AGDMVDY 163


>sp|Y1650_METJA|UNCHARACTERIZED protein MJ1650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AGDMIEYK 9
GD++EYK
Sbjct: 271 VGDVVEYK 278


>sp|SMC_PYRFU|CHROMOSOME partition protein Smc|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PAGDMIEY 8
PA D+IEY
Sbjct: 595 PAVDVIEY 602


>sp|PSA_PICTO|PROTEASOME subunit alpha|Picrophilus torridus (strain ATCC 700027

Query: 1 PAGDMIEYK 9
PAG + EYK
Sbjct: 153 PAGTINEYK 161


>sp|GGR_METMP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PAGDMIEYKA 10
PAG M Y A
Sbjct: 17 PAGSMASYNA 26


>sp|GGR_METM5|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C5 /

Query: 1 PAGDMIEYKA 10
PAG M Y A
Sbjct: 17 PAGSMASYNA 26


>sp|PSB_METS3|PROTEASOME subunit beta|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PAGDMIE 7
PAG MIE
Sbjct: 121 PAGGMIE 127


>sp|GGR_METM6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C6 /

Query: 1 PAGDMIEYKA 10
PAG M Y A
Sbjct: 17 PAGSMASYNA 26


>sp|GGR_METVS|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PAGDMIEYKA 10
PAG M Y A
Sbjct: 17 PAGSMSSYNA 26


>sp|GGR_METM7|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C7 /

Query: 1 PAGDMIEYKA 10
PAG M Y A
Sbjct: 17 PAGSMASYNA 26


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 AGDMIEY 8
AGDM EY
Sbjct: 702 AGDMQEY 708




48|SequenceR|245|236|SEGKVPAGDM

>sp|GATD_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Aeropyrum pernix (strain ATCC 700893

Query: 3 GKVPAGDM 10
G +PAGDM
Sbjct: 371 GAIPAGDM 378


>sp|GATD_THEPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermofilum pendens (strain DSM 2475

Query: 3 GKVPAGDM 10
G VPAGDM
Sbjct: 396 GVVPAGDM 403


>sp|ASPG_PYRFU|L-ASPARAGINASE furiosus (strain ATCC 43587

Query: 3 GKVPAGDM 10
G +PAGDM
Sbjct: 283 GVIPAGDM 290


>sp|ASPG_THEKO|L-ASPARAGINASE kodakarensis (strain ATCC BAA-918

Query: 3 GKVPAGDM 10
G +PAGDM
Sbjct: 284 GVIPAGDM 291


>sp|ATGT_HALVD|TRNA-GUANINE(15) transglycosylase|Haloferax volcanii (strain ATCC 29605

Query: 1 SEGKVPAGD 9
+EG VP+GD
Sbjct: 399 TEGGVPSGD 407


>sp|HISX_PICTO|HISTIDINOL dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 3 GKVPAGD 9
G VPAGD
Sbjct: 302 GPVPAGD 308


>sp|AGLQ_HALVD|ARCHAEAL glycosylation protein Q|Haloferax volcanii (strain ATCC 29605

Query: 1 SEGKVPAG 8
S+G +PAG
Sbjct: 21 SDGSMPAG 28


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 EGKVPAGDM 10
+GKVP G++
Sbjct: 402 DGKVPEGEL 410


>sp|Y1154_METJA|UNCHARACTERIZED protein MJ1154|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EGKVPAGDM 10
EGK+ +GD+
Sbjct: 131 EGKIISGDV 139


>sp|RL30_METAR|LARGE ribosomal subunit protein uL30|Methanocella arvoryzae (strain DSM

Query: 1 SEGKVPAGDM 10
+EGK GDM
Sbjct: 100 AEGKAKLGDM 109


>sp|DAPB_METHJ|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 EGKVPA 7
EGKVPA
Sbjct: 107 EGKVPA 112


>sp|RL10_IGNH4|LARGE ribosomal subunit protein uL10|Ignicoccus hospitalis (strain KIN4/I

Query: 1 SEGKVPAGD 9
SE VPAGD
Sbjct: 128 SEIVVPAGD 136


>sp|RL18_SULAC|LARGE ribosomal subunit protein uL18|Sulfolobus acidocaldarius (strain

Query: 4 KVPAGDM 10
KVP GD+
Sbjct: 130 KVPVGDL 136


>sp|EF2_METRM|ELONGATION factor 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 3 GKVPAGDM 10
GKVP G++
Sbjct: 350 GKVPVGNI 357


>sp|EF2_METST|ELONGATION factor 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SEGKVPAG 8
SEG++P G
Sbjct: 504 SEGEIPEG 511


>sp|PYRE_THEKO|OROTATE phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 EGKVPAGD 9
EG+V AGD
Sbjct: 107 EGEVKAGD 114


>sp|GATA_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Haloarcula marismortui (strain ATCC

Query: 1 SEGKVPAG 8
+EG+VP G
Sbjct: 96 AEGRVPGG 103




49|SequenceR|250|241|LRIPISEGKV

>sp|PUR7_SACS2|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RIPISEGKV 10
R+PI EG+V
Sbjct: 102 RLPIKEGEV 110


>sp|PUR7_SULTO|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 RIPISEGKV 10
R+PI EG+V
Sbjct: 102 RLPIKEGEV 110


>sp|BIOD_HALMT|ATP-DEPENDENT dethiobiotin synthetase BioD|Haloferax mediterranei (strain ATCC

Query: 1 LRIPISEGK 9
LR+P+++GK
Sbjct: 116 LRVPLADGK 124


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 2 RIPISEGKV 10
R P++EGKV
Sbjct: 37 RHPVNEGKV 45


>sp|PUR7_SULAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RIPISEGKV 10
R+PI EG+V
Sbjct: 102 RLPIKEGEV 110


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 3 IPISEGKV 10
IP+S+GKV
Sbjct: 572 IPMSQGKV 579


>sp|GLNA_METTH|GLUTAMINE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LRIPISEGK 9
+RIP S GK
Sbjct: 319 IRIPASRGK 327


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 2 RIPISEGKV 10
R PI+EGK+
Sbjct: 36 RHPINEGKL 44


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 2 RIPISEGKV 10
R P++EGK+
Sbjct: 36 RHPVNEGKL 44


>sp|RL6_SULAC|LARGE ribosomal subunit protein uL6|Sulfolobus acidocaldarius (strain

Query: 1 LRIPISEGKV 10
+RI ++EGK+
Sbjct: 47 IRIQLNEGKI 56


>sp|Y006_METJA|UNCHARACTERIZED oxidoreductase MJ0006|Methanocaldococcus jannaschii (strain ATCC

Query: 2 RIPISEGK 9
R PI+EGK
Sbjct: 34 RHPINEGK 41


>sp|PCP_PYRFU|PYRROLIDONE-CARBOXYLATE peptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RIPISEGK 9
RIP +EGK
Sbjct: 89 RIPDNEGK 96


>sp|PUR7_THEKO|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 IPISEGKV 10
IP+ +GKV
Sbjct: 12 IPLDDGKV 19


>sp|PUR7_THESM|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermococcus sibiricus (strain DSM 12597

Query: 3 IPISEGKV 10
IP+ +GKV
Sbjct: 16 IPLDDGKV 23




50|SequenceR|255|246|YGALFLRIPI

>sp|LEUC2_METKA|3-ISOPROPYLMALATE dehydratase large subunit 2|Methanopyrus kandleri (strain AV19 /

Query: 1 YGALFLRIP 9
YG L++R+P
Sbjct: 146 YGELWIRVP 154


>sp|LEUC_METB6|3-ISOPROPYLMALATE dehydratase large subunit|Methanoregula boonei (strain DSM 21154

Query: 1 YGALFLRIP 9
+GAL+ ++P
Sbjct: 147 FGALYFKVP 155


>sp|Y1062_METJA|UNCHARACTERIZED protein MJ1062|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGALFLRIPI 10
+ ALFL IP+
Sbjct: 256 FEALFLGIPV 265


>sp|PDXT_METBU|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcoides burtonii

Query: 1 YGALFLRIP 9
Y A+F+R P
Sbjct: 138 YNAVFIRAP 146


>sp|KATG_NATPD|CATALASE-PEROXIDASE pharaonis (strain ATCC 35678

Query: 1 YGALFLRI 8
YG LF+R+
Sbjct: 68 YGPLFIRM 75


>sp|KATG_METHJ|CATALASE-PEROXIDASE hungatei JF-1 (strain ATCC

Query: 1 YGALFLRI 8
YG LF+R+
Sbjct: 87 YGPLFIRM 94


>sp|KATG_METB6|CATALASE-PEROXIDASE boonei (strain DSM 21154

Query: 1 YGALFLRI 8
YG LF+R+
Sbjct: 87 YGPLFIRM 94


>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 1 YGALFLRI 8
YG LF+R+
Sbjct: 92 YGPLFIRM 99


>sp|KATG_HALSA|CATALASE-PEROXIDASE salinarum (strain ATCC 700922

Query: 1 YGALFLRI 8
YG LF+R+
Sbjct: 73 YGPLFIRM 80


>sp|KATG_HALS3|CATALASE-PEROXIDASE salinarum (strain ATCC 29341

Query: 1 YGALFLRI 8
YG LF+R+
Sbjct: 73 YGPLFIRM 80


>sp|KATG2_HALMA|CATALASE-PEROXIDASE 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 YGALFLRI 8
YG LF+R+
Sbjct: 86 YGPLFIRM 93


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 YGALFLRI 8
YG LF+R+
Sbjct: 83 YGPLFIRM 90


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 1 YGALFLRI 8
YG LF+R+
Sbjct: 77 YGPLFIRL 84


>sp|PDXT_METTP|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanothrix thermoacetophila

Query: 1 YGALFLRIPI 10
Y A+F+R P+
Sbjct: 129 YRAVFIRAPV 138


>sp|PDXT_PICTO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Picrophilus torridus (strain

Query: 1 YGALFLRIPI 10
+ A+F+R P+
Sbjct: 129 FNAVFIRAPV 138


>sp|CEDA_SULAC|DNA import protein CedA|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GALFLRIP 9
G LFL IP
Sbjct: 152 GVLFLSIP 159




51|SequenceR|260|251|TPTPDYGALF

>sp|NRPR_METMP|GLOBAL nitrogen regulator NrpR|Methanococcus maripaludis (strain DSM 14266

Query: 2 PTPDYGAL 9
PTP+YG +
Sbjct: 163 PTPEYGGI 170


>sp|G3P_AERPE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 3 TPDYGALF 10
TPDY AL+
Sbjct: 37 TPDYAALY 44


>sp|Y1319_METJA|UNCHARACTERIZED sodium-dependent transporter MJ1319|Methanocaldococcus jannaschii

Query: 3 TPDYGALF 10
TPD+ ALF
Sbjct: 211 TPDFSALF 218


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PTPDYG 7
P PDYG
Sbjct: 916 PDPDYG 921


>sp|Y1571_AERPE|UNCHARACTERIZED protein APE_1571.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 TPTPDYGA 8
TPTP YG+
Sbjct: 437 TPTPMYGS 444


>sp|THIE_PYRHO|THIAMINE-PHOSPHATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 TPDYGALF 10
T +YGALF
Sbjct: 58 TNEYGALF 65


>sp|RS8_HALWD|SMALL ribosomal subunit protein uS8|Haloquadratum walsbyi (strain DSM

Query: 2 PTPDYGAL 9
P DYGAL
Sbjct: 95 PARDYGAL 102


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 TPTPDYGALF 10
T DYG+LF
Sbjct: 404 TELKDYGSLF 413


>sp|CAPPA_PYRAR|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PTPDYGALF 10
PTP Y AL
Sbjct: 432 PTPTYTALL 440


>sp|Y762_ARCFU|UNCHARACTERIZED protein AF_0762|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TPTPD 5
TPTPD
Sbjct: 129 TPTPD 133


>sp|Y709_METMP|PROBABLE minor pilin MMP0709|Methanococcus maripaludis (strain DSM 14266

Query: 3 TPDYGA 8
TPD+GA
Sbjct: 51 TPDFGA 56


>sp|RS3A_METJA|SMALL ribosomal subunit protein eS1|Methanocaldococcus jannaschii

Query: 3 TPDYGALF 10
TP++G +F
Sbjct: 31 TPEFGGVF 38


>sp|TRUB_METTH|PROBABLE tRNA pseudouridine synthase B|Methanothermobacter

Query: 1 TPTPDYG 7
T PDYG
Sbjct: 16 TTNPDYG 22


>sp|PRIS_METTP|DNA primase small subunit PriS|Methanothrix thermoacetophila (strain

Query: 1 TPTPDYGALF 10
T P+Y A+F
Sbjct: 376 TELPEYAAVF 385


>sp|COXX1_CENSY|PROTOHEME IX farnesyltransferase 1|Cenarchaeum symbiosum (strain A)

Query: 1 TPTPDYG 7
TPTPD+
Sbjct: 258 TPTPDFA 264


>sp|MTRG_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit G|Methanococcus maripaludis (strain

Query: 1 TPTPDYGAL 9
TPT DY L
Sbjct: 9 TPTKDYKRL 17


>sp|DGGGP_PYRAB|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 TPDYGAL 9
TP YGAL
Sbjct: 142 TPIYGAL 148


>sp|SPSS1_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocella arvoryzae (strain DSM 22066

Query: 1 TPTPDY 6
TP PDY
Sbjct: 133 TPAPDY 138


>sp|Y1402_METJA|UNCHARACTERIZED protein MJ1402|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PTPDY 6
PTPDY
Sbjct: 83 PTPDY 87


>sp|LIPA_METAR|LIPOYL synthase|Methanocella arvoryzae (strain DSM 22066

Query: 4 PDYGA 8
PDYGA
Sbjct: 113 PDYGA 117




52|SequenceR|265|256|NVDRMTPTPD

>sp|LYSZ_PYRAE|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum aerophilum

Query: 2 VDRMTPTP 9
VD++TP P
Sbjct: 138 VDKLTPPP 145


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 1 NVDRMTP 7
NVD MTP
Sbjct: 879 NVDEMTP 885


>sp|PGP_ARCFU|PHOSPHOGLYCOLATE phosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DRMTPTPD 10
D +TP+PD
Sbjct: 201 DLVTPSPD 208


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain Fusaro

Query: 1 NVDRMTP 7
NVD MTP
Sbjct: 879 NVDEMTP 885


>sp|SYFB_HALSA|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 NVDRMTPTPD 10
N DRM TPD
Sbjct: 403 NFDRMRLTPD 412


>sp|SYFB_HALS3|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 NVDRMTPTPD 10
N DRM TPD
Sbjct: 403 NFDRMRLTPD 412


>sp|GATE_METHJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanospirillum hungatei JF-1 (strain

Query: 2 VDRMTPTPD 10
V RMTP P+
Sbjct: 107 VCRMTPVPE 115


>sp|COXX1_CENSY|PROTOHEME IX farnesyltransferase 1|Cenarchaeum symbiosum (strain A)

Query: 6 TPTPD 10
TPTPD
Sbjct: 258 TPTPD 262


>sp|Y762_ARCFU|UNCHARACTERIZED protein AF_0762|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 TPTPD 10
TPTPD
Sbjct: 129 TPTPD 133


>sp|SEPS_METMA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VDRMTPTPD 10
VDRM TP+
Sbjct: 372 VDRMPETPE 380


>sp|LEUC_CALMQ|3-ISOPROPYLMALATE dehydratase large subunit|Caldivirga maquilingensis (strain ATCC

Query: 1 NVDRMTPTPD 10
NV +TP PD
Sbjct: 242 NVKPITPDPD 251


>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 1 NVDRMTPTPD 10
N D + P PD
Sbjct: 287 NADVVVPVPD 296


>sp|Y1143_METST|PUTATIVE HTH-type transcriptional regulatory protein|Methanosphaera

Query: 1 NVDRMTPT 8
N+D +TPT
Sbjct: 53 NIDSLTPT 60


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 1 NVDRMTPTPD 10
N+D+ PT D
Sbjct: 170 NLDKFKPTDD 179


>sp|GGGPS_META3|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 NVDRMTPTPD 10
NVD +TP D
Sbjct: 78 NVDGLTPYAD 87




53|SequenceR|270|261|VSFKKNVDRM

>sp|GLCDH_METPS|GLUCOSE 1-dehydrogenase|Methanocella paludicola (strain DSM 17711

Query: 3 FKKNVDRM 10
F+K VDRM
Sbjct: 309 FEKGVDRM 316


>sp|Y1162_METJA|UNCHARACTERIZED protein MJ1162|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SFKKNVDR 9
SFK N+DR
Sbjct: 77 SFKLNIDR 84


>sp|AATI_METJA|A-TYPE ATP synthase subunit I|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VSFKKNVDR 9
V FK+NV R
Sbjct: 512 VGFKENVKR 520


>sp|AROK_METMP|SHIKIMATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 3 FKKNVD 8
FKKNVD
Sbjct: 177 FKKNVD 182


>sp|PCNA_METVS|DNA polymerase sliding clamp|Methanococcus vannielii (strain ATCC 35089

Query: 1 VSFKKNVDR 9
V+FK NV R
Sbjct: 99 VTFKSNVTR 107


>sp|PCNA_METM6|DNA polymerase sliding clamp|Methanococcus maripaludis (strain C6 /

Query: 1 VSFKKNVDR 9
V+FK NV R
Sbjct: 99 VTFKSNVTR 107


>sp|PCNA_METM5|DNA polymerase sliding clamp|Methanococcus maripaludis (strain C5 /

Query: 1 VSFKKNVDR 9
V+FK NV R
Sbjct: 99 VTFKSNVTR 107


>sp|PCNA_METM7|DNA polymerase sliding clamp|Methanococcus maripaludis (strain C7 /

Query: 1 VSFKKNVDR 9
V+FK NV R
Sbjct: 99 VTFKSNVTR 107




54|SequenceR|275|266|NLFYRVSFKK

>sp|SYR_METAR|ARGININE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 NLFYRVS 7
N FYRVS
Sbjct: 518 NQFYRVS 524




55|SequenceR|280|271|DVLVLNLFYR

>sp|LIPA_AERPE|LIPOYL synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DVLVLNLFYR 10
D+LVL+ +YR
Sbjct: 220 DILVLSQYYR 229


>sp|PPS_THEON|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus onnurineus (strain NA1)

Query: 3 LVLNLFYR 10
L +NLFYR
Sbjct: 99 LEINLFYR 106


>sp|PPS_THEKO|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LVLNLFYR 10
L +NLFYR
Sbjct: 99 LEINLFYR 106


>sp|PDXS_DESA1|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Desulfurococcus amylolyticus

Query: 1 DVLVLNLFYR 10
D+ +LN +YR
Sbjct: 205 DIYMLNGYYR 214


>sp|AROA_METTH|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanothermobacter thermautotrophicus

Query: 1 DVLVLNLF 8
DVL+ NLF
Sbjct: 250 DVLIENLF 257


>sp|GPMI_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DVLVLNL 7
DV+VLNL
Sbjct: 394 DVIVLNL 400




56|SequenceR|285|276|RRDEEDVLVL

>sp|THTR_METTH|PUTATIVE thiosulfate sulfurtransferase|Methanothermobacter

Query: 2 RDEEDVLVL 10
+D+EDVL+L
Sbjct: 166 KDDEDVLLL 174


>sp|Y1620_METJA|UNCHARACTERIZED protein MJ1620|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RDEEDVL 8
RDEED+L
Sbjct: 231 RDEEDIL 237


>sp|RL10_METBF|LARGE ribosomal subunit protein uL10|Methanosarcina barkeri (strain

Query: 1 RRDEEDVLVL 10
RRD +DV VL
Sbjct: 49 RRDLKDVAVL 58


>sp|RL10_METAC|LARGE ribosomal subunit protein uL10|Methanosarcina acetivorans (strain

Query: 1 RRDEEDVLVL 10
RRD +DV VL
Sbjct: 49 RRDLKDVAVL 58


>sp|RS19_METLZ|SMALL ribosomal subunit protein uS19|Methanocorpusculum labreanum

Query: 2 RDEEDV 7
RDEEDV
Sbjct: 52 RDEEDV 57


>sp|RL10_METMA|LARGE ribosomal subunit protein uL10|Methanosarcina mazei (strain ATCC

Query: 1 RRDEEDVLVL 10
RRD +DV VL
Sbjct: 49 RRDLKDVAVL 58




57|SequenceR|290|281|QQKFYRRDEE

>sp|AATB_PYRCJ|A-TYPE ATP synthase subunit B|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 QKFYRR 7
QKFYRR
Sbjct: 454 QKFYRR 459


>sp|AATB_PYRAE|A-TYPE ATP synthase subunit B|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 QKFYRR 7
QKFYRR
Sbjct: 454 QKFYRR 459


>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 QKFYRR 7
QKFYRR
Sbjct: 454 QKFYRR 459


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 2 QKFYRR 7
QKFYRR
Sbjct: 454 QKFYRR 459


>sp|AATB_PYRAR|A-TYPE ATP synthase subunit B|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 QKFYRR 7
QKFYRR
Sbjct: 454 QKFYRR 459


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 KFYRRDE 9
KFY RDE
Sbjct: 656 KFYTRDE 662


>sp|T1R1_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 4 FYRRDE 9
FYR+DE
Sbjct: 161 FYRKDE 166




58|SequenceR|295|286|WLIIEQQKFY

>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 WLIIEQQKFY 10
W++++Q FY
Sbjct: 540 WIVLDQTAFY 549


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WLIIEQQKFY 10
W++++Q FY
Sbjct: 542 WVVLDQTAFY 551


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WLIIEQQKFY 10
W++++Q FY
Sbjct: 540 WVVLDQTAFY 549


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 WLIIEQQKFY 10
W+++++ FY
Sbjct: 533 WVVLDRTYFY 542




59|SequenceR|300|291|EPAKRWLIIE

>sp|SRP54_METLZ|SIGNAL recognition particle 54 kDa|Methanocorpusculum labreanum (strain

Query: 2 PAKRWLIIE 10
P RWL+I+
Sbjct: 208 PDHRWLVID 216


>sp|MTRA_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanopyrus kandleri (strain AV19

Query: 1 EPAKRWLIIE 10
EPA+ W ++E
Sbjct: 6 EPAEGWPVVE 15


>sp|GGR_METS3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 EPAKRWLIIE 10
EP+ RW+ E
Sbjct: 59 EPSPRWITKE 68


>sp|SYP_NANEQ|PROLINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 EPAKRWLII 9
EPAK W+ I
Sbjct: 525 EPAKYWVYI 533


>sp|RL3_METBF|LARGE ribosomal subunit protein uL3|Methanosarcina barkeri (strain Fusaro

Query: 2 PAKRWLI 8
PAKRW I
Sbjct: 213 PAKRWGI 219


>sp|COST_HALSA|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 700922

Query: 2 PAKRWLIIE 10
P K W++++
Sbjct: 299 PGKNWVVVK 307


>sp|COST_HALS3|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 29341

Query: 2 PAKRWLIIE 10
P K W++++
Sbjct: 299 PGKNWVVVK 307


>sp|RL3_ARCFU|LARGE ribosomal subunit protein uL3|Archaeoglobus fulgidus (strain ATCC

Query: 2 PAKRWLII 9
P KRW +I
Sbjct: 206 PVKRWGVI 213


>sp|MTRA_METEZ|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanohalobium evestigatum (strain

Query: 1 EPAKRWLIIE 10
EPA+ W I++
Sbjct: 6 EPAEGWPILK 15




60|SequenceR|305|296|QKRLKEPAKR

>sp|DCD_THEGJ|DCTP deaminase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 RLKEPAKR 10
RL+EPAKR
Sbjct: 129 RLEEPAKR 136




61|SequenceR|310|301|HFNTRQKRLK

>sp|HEXPP_SACS2|HEXAPRENYL pyrophosphate synthase|Saccharolobus solfataricus (strain ATCC

Query: 1 HFNTRQKRL 9
H+NT+Q+ L
Sbjct: 178 HYNTKQQML 186


>sp|RADB_THEON|DNA repair and recombination protein|Thermococcus onnurineus (strain

Query: 1 HFNTRQKRLK 10
HF++R +R+K
Sbjct: 156 HFDSRAERMK 165


>sp|Y1556_METMJ|UPF0200 protein Memar_1556|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 FNTRQKRLK 10
F TR +RLK
Sbjct: 113 FTTRYRRLK 121




62|SequenceR|315|306|SEFRQHFNTR

>sp|YPZ11_METTF|UNCHARACTERIZED protein ORF11'|Methanothermobacter thermautotrophicus

Query: 2 EFRQHFNTR 10
EFR+HF T+
Sbjct: 2 EFRRHFTTK 10


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EFRQHFN 8
E R+HFN
Sbjct: 639 ELREHFN 645


>sp|SYP_METM7|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 SEFRQHFNTR 10
SEFR H + R
Sbjct: 308 SEFRVHLDDR 317


>sp|SYP_METM5|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 SEFRQHFNTR 10
SEFR H + R
Sbjct: 308 SEFRVHLDDR 317


>sp|RL13_PYRAE|LARGE ribosomal subunit protein uL13|Pyrobaculum aerophilum (strain

Query: 1 SEFRQHFN 8
SE+R H+N
Sbjct: 73 SEWRTHYN 80


>sp|SYP_METMP|PROLINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SEFRQHFNTR 10
SEFR H + R
Sbjct: 308 SEFRVHLDDR 317


>sp|TMCA_PYRAB|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus abyssi (strain GE5 /

Query: 2 EFRQHFN 8
EFR+HF+
Sbjct: 107 EFRKHFS 113


>sp|TMCA_PYRFU|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus furiosus (strain ATCC

Query: 2 EFRQHFN 8
EFR+HF+
Sbjct: 107 EFRKHFS 113


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 2 EFRQHFNT 9
+FR+ FNT
Sbjct: 232 KFREEFNT 239


>sp|RL13_PYRIL|LARGE ribosomal subunit protein uL13|Pyrobaculum islandicum (strain DSM

Query: 1 SEFRQHFN 8
SE+R H+N
Sbjct: 71 SEWRTHYN 78


>sp|Y4021_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 SEFRQHFNTR 10
+EFR +F T+
Sbjct: 80 NEFRSYFRTK 89


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 SEFRQHFNT 9
+E R H NT
Sbjct: 834 AELRDHINT 842


>sp|SYT_HALMA|THREONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 SEFRQHFNT 9
+EFR H T
Sbjct: 619 AEFRDHLET 627




63|SequenceR|320|311|AQSEPSEFRQ

>sp|TDH_PYRFU|L-THREONINE 3-dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 SEPSEFRQ 10
SEPSEFR+
Sbjct: 198 SEPSEFRR 205


>sp|TDH_THEKO|L-THREONINE 3-dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 SEPSEFRQ 10
SEPSEFR+
Sbjct: 198 SEPSEFRR 205


>sp|TDH_THEON|L-THREONINE 3-dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 3 SEPSEFRQ 10
SEPSEFR+
Sbjct: 198 SEPSEFRR 205


>sp|TDH_PYRHO|L-THREONINE 3-dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 SEPSEFRQ 10
SEPS+FR+
Sbjct: 198 SEPSDFRR 205


>sp|TDH_PYRAB|L-THREONINE 3-dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 3 SEPSEFRQ 10
SEPS+FR+
Sbjct: 198 SEPSDFRR 205


>sp|Y1254_IGNH4|UPF0173 metal-dependent hydrolase Igni_1254|Ignicoccus hospitalis (strain

Query: 2 QSEPSEFRQ 10
+++P+EF+Q
Sbjct: 202 RADPNEFKQ 210


>sp|AATB_PICTO|A-TYPE ATP synthase subunit B|Picrophilus torridus (strain ATCC 700027

Query: 1 AQSEPSEFRQ 10
++ EPSEF Q
Sbjct: 121 SREEPSEFVQ 130


>sp|TRUD_HALMA|PROBABLE tRNA pseudouridine synthase D|Haloarcula marismortui (strain ATCC

Query: 3 SEPSEFRQ 10
SEP++FR+
Sbjct: 277 SEPADFRE 284


>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 SEPSEFRQ 10
S+PSE+R+
Sbjct: 437 SKPSEYRE 444




64|SequenceR|327|316|MEPQEASAQSEP

>sp|RPO11_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo11|Halobacterium salinarum (strain ATCC

Query: 1 MEPQEASAQSEP 12
M P+++ Q+EP
Sbjct: 45 MNPEQSGGQTEP 56


>sp|RPO11_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo11|Halobacterium salinarum (strain ATCC

Query: 1 MEPQEASAQSEP 12
M P+++ Q+EP
Sbjct: 45 MNPEQSGGQTEP 56




THE END