TSH3_HUMAN Blast Output
Bacteria
1|Sequence|1|10|MPRRKQQAPR

***** No hits found ******


2|Sequence|6|15|QQAPRRAAAY

***** No hits found ******


3|Sequence|11|20|RAAAYVSEEL

***** No hits found ******


4|Sequence|16|25|VSEELKAAAL

***** No hits found ******


5|Sequence|21|30|KAAALVDEGL

***** No hits found ******


6|Sequence|26|35|VDEGLDPEEH

***** No hits found ******


7|Sequence|31|40|DPEEHTADGE

***** No hits found ******


8|Sequence|36|45|TADGEPSAKY

***** No hits found ******


9|Sequence|41|50|PSAKYMCPEK

***** No hits found ******


10|Sequence|46|55|MCPEKELARA

***** No hits found ******


11|Sequence|51|60|ELARACPSYQ

***** No hits found ******


12|Sequence|56|65|CPSYQNSPAA

***** No hits found ******


13|Sequence|61|70|NSPAAEFSCH

***** No hits found ******


14|Sequence|66|75|EFSCHEMDSE

***** No hits found ******


15|Sequence|71|80|EMDSESHISE

***** No hits found ******


16|Sequence|76|85|SHISETSDRM

***** No hits found ******


17|Sequence|81|90|TSDRMADFES

***** No hits found ******


18|Sequence|86|95|ADFESGSIKN

***** No hits found ******


19|Sequence|91|100|GSIKNEEETK

***** No hits found ******


20|Sequence|96|105|EEETKEVTVP

***** No hits found ******


21|Sequence|101|110|EVTVPLEDTT

***** No hits found ******


22|Sequence|106|115|LEDTTVSDSL

***** No hits found ******


23|Sequence|111|120|VSDSLEQMKA

***** No hits found ******


24|Sequence|116|125|EQMKAVYNNF

***** No hits found ******


25|Sequence|121|130|VYNNFLSNSY

***** No hits found ******


26|Sequence|126|135|LSNSYWSNLN

***** No hits found ******


27|Sequence|131|140|WSNLNLNLHQ

***** No hits found ******


28|Sequence|136|145|LNLHQPSSEK

***** No hits found ******


29|Sequence|141|150|PSSEKNNGSS

***** No hits found ******


30|Sequence|146|155|NNGSSSSSSS

***** No hits found ******


31|Sequence|151|160|SSSSSSSSSC

***** No hits found ******


32|Sequence|156|165|SSSSCGSGSF

***** No hits found ******


33|Sequence|161|170|GSGSFDWHQS

***** No hits found ******


34|Sequence|166|175|DWHQSAMAKT

***** No hits found ******


35|Sequence|171|180|AMAKTLQQVS

***** No hits found ******


36|Sequence|176|185|LQQVSQSRML

***** No hits found ******


37|Sequence|181|190|QSRMLPEPSL

***** No hits found ******


38|Sequence|186|195|PEPSLFSTVQ

***** No hits found ******


39|Sequence|191|200|FSTVQLYRQS

***** No hits found ******


40|Sequence|196|205|LYRQSSKLYG

***** No hits found ******


41|Sequence|201|210|SKLYGSIFTG

***** No hits found ******


42|Sequence|206|215|SIFTGASKFR

***** No hits found ******


43|Sequence|211|220|ASKFRCKDCS

***** No hits found ******


44|Sequence|216|225|CKDCSAAYDT

>sp|TAPB_AERHY|TYPE IV pilus assembly protein|Aeromonas hydrophila

Query: 1 CKDCSAAY 8
CKDCS Y
Sbjct: 496 CKDCSGGY 503


>sp|SPRTL_STRS7|PROTEIN SprT-like|Streptococcus equi subsp. zooepidemicus (strain

Query: 1 CKDCSAAYD 9
C+DC AYD
Sbjct: 112 CQDCGQAYD 120


>sp|SPRTL_STRE4|PROTEIN SprT-like|Streptococcus equi subsp. equi (strain

Query: 1 CKDCSAAYD 9
C+DC AYD
Sbjct: 112 CQDCGQAYD 120




45|Sequence|221|230|AAYDTLVELT

***** No hits found ******


46|Sequence|226|235|LVELTVHMNE

***** No hits found ******


47|Sequence|231|240|VHMNETGHYR

***** No hits found ******


48|Sequence|236|245|TGHYRDDNHE

***** No hits found ******


49|Sequence|241|250|DDNHETDNNN

***** No hits found ******


50|Sequence|246|255|TDNNNPKRWS

>sp|HTPG_HELHP|CHAPERONE protein HtpG|Helicobacter hepaticus (strain ATCC 51449

Query: 2 DNNNPKRW 9
DNN P RW
Sbjct: 260 DNNEPMRW 267




51|Sequence|251|260|PKRWSKPRKR

***** No hits found ******


52|Sequence|256|265|KPRKRSLLEM

***** No hits found ******


53|Sequence|261|270|SLLEMEGKED

***** No hits found ******


54|Sequence|266|275|EGKEDAQKVL

***** No hits found ******


55|Sequence|271|280|AQKVLKCMYC

***** No hits found ******


56|Sequence|276|285|KCMYCGHSFE

>sp|PRIA_BACSU|REPLICATION restart protein PriA|Bacillus subtilis (strain 168)

Query: 1 KCMYCGH 7
KC YCGH
Sbjct: 536 KCHYCGH 542


>sp|INSQ_ECOLI|PUTATIVE RNA-guided DNA endonuclease InsQ|Escherichia coli (strain K12)

Query: 1 KCMYCGHS 8
+C YCGH+
Sbjct: 333 RCAYCGHT 340


>sp|NRDR_CUPTR|TRANSCRIPTIONAL repressor NrdR|Cupriavidus taiwanensis (strain DSM 17343

Query: 1 KCMYCGHS 8
KC +CGHS
Sbjct: 2 KCPFCGHS 9


>sp|NRDR_CUPPJ|TRANSCRIPTIONAL repressor NrdR|Cupriavidus pinatubonensis (strain JMP 134

Query: 1 KCMYCGHS 8
KC +CGHS
Sbjct: 2 KCPFCGHS 9


>sp|NRDR_CUPNH|TRANSCRIPTIONAL repressor NrdR|Cupriavidus necator (strain ATCC 17699

Query: 1 KCMYCGHS 8
KC +CGHS
Sbjct: 2 KCPFCGHS 9


>sp|NRDR_CUPMC|TRANSCRIPTIONAL repressor NrdR|Cupriavidus metallidurans (strain ATCC 43123

Query: 1 KCMYCGHS 8
KC +CGHS
Sbjct: 2 KCPFCGHS 9


>sp|GPDA_SERMA|GLYCEROL-3-PHOSPHATE dehydrogenase [NAD(P)+]|Serratia marcescens

Query: 2 CMYCGHSF 9
CM+CG SF
Sbjct: 171 CMHCGKSF 178


>sp|ACCD_BACVZ|ACETYL-COENZYME A carboxylase carboxyl transferase|Bacillus velezensis (strain

Query: 2 CMYCGHSF 9
CM CGH F
Sbjct: 51 CMNCGHHF 58


>sp|NRDR_DESPS|TRANSCRIPTIONAL repressor NrdR|Desulfotalea psychrophila (strain LSv54 /

Query: 1 KCMYCGH 7
KC YCGH
Sbjct: 2 KCPYCGH 8


>sp|NRDR_THET8|TRANSCRIPTIONAL repressor NrdR|Thermus thermophilus (strain ATCC 27634

Query: 1 KCMYCGH 7
KC YCGH
Sbjct: 2 KCPYCGH 8


>sp|NRDR_THET2|TRANSCRIPTIONAL repressor NrdR|Thermus thermophilus (strain ATCC BAA-163

Query: 1 KCMYCGH 7
KC YCGH
Sbjct: 2 KCPYCGH 8




57|Sequence|281|290|GHSFESLQDL

***** No hits found ******


58|Sequence|286|295|SLQDLSVHMI

***** No hits found ******


59|Sequence|291|300|SVHMIKTKHY

>sp|CBBYP_CUPNH|PROTEIN CbbY, plasmid|Cupriavidus necator (strain ATCC 17699

Query: 1 SVHMIKTKHY 10
+VH IKT+HY
Sbjct: 77 AVHAIKTRHY 86


>sp|CBBYC_CUPNH|PROTEIN CbbY, chromosomal|Cupriavidus necator (strain ATCC 17699

Query: 1 SVHMIKTKHY 10
+VH IKT+HY
Sbjct: 77 AVHAIKTRHY 86




60|Sequence|296|305|KTKHYQKVPL

***** No hits found ******


61|Sequence|301|310|QKVPLKEPVT

***** No hits found ******


62|Sequence|306|315|KEPVTPVAAK

***** No hits found ******


63|Sequence|311|320|PVAAKIIPAT

***** No hits found ******


64|Sequence|316|325|IIPATRKKAS

***** No hits found ******


65|Sequence|321|330|RKKASLELEL

***** No hits found ******


66|Sequence|326|335|LELELPSSPD

***** No hits found ******


67|Sequence|331|340|PSSPDSTGGT

***** No hits found ******


68|Sequence|336|345|STGGTPKATI

***** No hits found ******


69|Sequence|341|350|PKATISDTND

***** No hits found ******


70|Sequence|346|355|SDTNDALQKN

***** No hits found ******


71|Sequence|351|360|ALQKNSNPYI

***** No hits found ******


72|Sequence|356|365|SNPYITPNNR

>sp|RNC_HELPG|RIBONUCLEASE 3|Helicobacter pylori (strain G27)

Query: 1 SNPYITPNN 9
++PY+TPNN
Sbjct: 8 NSPYVTPNN 16


>sp|RNC_HELP2|RIBONUCLEASE 3|Helicobacter pylori (strain P12)

Query: 1 SNPYITPNN 9
++PY+TPNN
Sbjct: 8 NSPYVTPNN 16




73|Sequence|361|370|TPNNRYGHQN

>sp|DRMA_BACP9|DISARM protein DrmA|Bacillus paralicheniformis (strain ATCC 9945a

Query: 1 TPNNRYGHQN 10
TPN ++ HQN
Sbjct: 99 TPNKKFKHQN 108




74|Sequence|366|375|YGHQNGASYA

***** No hits found ******


75|Sequence|371|380|GASYAWHFEA

>sp|TRP7H_KUTS7|TRYPTOPHAN 7-halogenase KtzQ|Kutzneria sp. (strain 744)

Query: 2 ASYAWHFEA 10
ASYAWHF+A
Sbjct: 167 ASYAWHFDA 175




76|Sequence|376|385|WHFEARKSQI

***** No hits found ******


77|Sequence|381|390|RKSQILKCME

***** No hits found ******


78|Sequence|386|395|LKCMECGSSH

>sp|NRDJ_LEPIN|VITAMIN B12-dependent ribonucleotide reductase|Leptospira interrogans

Query: 1 LKCMECGSS 9
LKCM CGS+
Sbjct: 1189 LKCMSCGST 1197


>sp|NRDJ_LEPIC|VITAMIN B12-dependent ribonucleotide reductase|Leptospira interrogans

Query: 1 LKCMECGSS 9
LKCM CGS+
Sbjct: 1189 LKCMSCGST 1197


>sp|SYI_MOOTA|ISOLEUCINE--TRNA ligase|Moorella thermoacetica (strain ATCC 39073

Query: 1 LKCMECGS 8
LKC ECGS
Sbjct: 509 LKCPECGS 516


>sp|SYI_MARSD|ISOLEUCINE--TRNA ligase|Maridesulfovibrio salexigens (strain ATCC 14822

Query: 1 LKCMECGSSH 10
LKC +CG +H
Sbjct: 525 LKCPKCGGNH 534




79|Sequence|391|400|CGSSHDTLQE

***** No hits found ******


80|Sequence|396|405|DTLQELTAHM

***** No hits found ******


81|Sequence|401|410|LTAHMMVTGH

***** No hits found ******


82|Sequence|406|415|MVTGHFIKVT

***** No hits found ******


83|Sequence|411|420|FIKVTNSAMK

***** No hits found ******


84|Sequence|416|425|NSAMKKGKPI

***** No hits found ******


85|Sequence|421|430|KGKPIVETPV

***** No hits found ******


86|Sequence|426|435|VETPVTPTIT

***** No hits found ******


87|Sequence|431|440|TPTITTLLDE

***** No hits found ******


88|Sequence|436|445|TLLDEKVQSV

***** No hits found ******


89|Sequence|441|450|KVQSVPLAAT

***** No hits found ******


90|Sequence|446|455|PLAATTFTSP

***** No hits found ******


91|Sequence|451|460|TFTSPSNTPA

***** No hits found ******


92|Sequence|456|465|SNTPASISPK

***** No hits found ******


93|Sequence|461|470|SISPKLNVEV

***** No hits found ******


94|Sequence|466|475|LNVEVKKEVD

***** No hits found ******


95|Sequence|471|480|KKEVDKEKAV

***** No hits found ******


96|Sequence|476|485|KEKAVTDEKP

***** No hits found ******


97|Sequence|481|490|TDEKPKQKDK

***** No hits found ******


98|Sequence|486|495|KQKDKPGEEE

***** No hits found ******


99|Sequence|491|500|PGEEEEKCDI

***** No hits found ******


100|Sequence|496|505|EKCDISSKYH

***** No hits found ******


101|Sequence|501|510|SSKYHYLTEN

***** No hits found ******


102|Sequence|506|515|YLTENDLEES

***** No hits found ******


103|Sequence|511|520|DLEESPKGGL

***** No hits found ******


104|Sequence|516|525|PKGGLDILKS

>sp|Y2558_SYNAS|UNCHARACTERIZED solute-binding protein SYNAS_25580|Syntrophus aciditrophicus

Query: 1 PKGGLDILK 9
PKGGL ILK
Sbjct: 288 PKGGLKILK 296




105|Sequence|521|530|DILKSLENTV

***** No hits found ******


106|Sequence|526|535|LENTVTSAIN

***** No hits found ******


107|Sequence|531|540|TSAINKAQNG

***** No hits found ******


108|Sequence|536|545|KAQNGTPSWG

>sp|YQGF_SALG2|PUTATIVE pre-16S rRNA nuclease|Salmonella gallinarum (strain 287/91 /

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_SALEP|PUTATIVE pre-16S rRNA nuclease|Salmonella enteritidis PT4 (strain P125109)

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_SALDC|PUTATIVE pre-16S rRNA nuclease|Salmonella dublin (strain CT_02021853)

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_SALTI|PUTATIVE pre-16S rRNA nuclease|Salmonella typhi

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_SALSV|PUTATIVE pre-16S rRNA nuclease|Salmonella schwarzengrund (strain CVM19633)

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_SALPK|PUTATIVE pre-16S rRNA nuclease|Salmonella paratyphi A (strain AKU_12601)

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_SALPC|PUTATIVE pre-16S rRNA nuclease|Salmonella paratyphi C (strain RKS4594)

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_SALPB|PUTATIVE pre-16S rRNA nuclease|Salmonella paratyphi B (strain ATCC

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_SALPA|PUTATIVE pre-16S rRNA nuclease|Salmonella paratyphi A (strain ATCC

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_SALHS|PUTATIVE pre-16S rRNA nuclease|Salmonella heidelberg (strain SL476)

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_SALCH|PUTATIVE pre-16S rRNA nuclease|Salmonella choleraesuis (strain SC-B67)

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_SALA4|PUTATIVE pre-16S rRNA nuclease|Salmonella agona (strain SL483)

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_CITK8|PUTATIVE pre-16S rRNA nuclease|Citrobacter koseri (strain ATCC BAA-895

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ENT38|PUTATIVE pre-16S rRNA nuclease|Enterobacter sp. (strain 638)

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ALISL|PUTATIVE pre-16S rRNA nuclease|Aliivibrio salmonicida (strain LFI1238)

Query: 1 KAQNGTPSW 9
KAQ+GTP+W
Sbjct: 35 KAQDGTPNW 43


>sp|YQGF_PSE14|PUTATIVE pre-16S rRNA nuclease|Pseudomonas savastanoi pv. phaseolicola

Query: 1 KAQNGTPSW 9
KAQNG P W
Sbjct: 36 KAQNGVPDW 44


>sp|YQGF_SALTY|PUTATIVE pre-16S rRNA nuclease|Salmonella typhimurium (strain LT2 /

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_SALNS|PUTATIVE pre-16S rRNA nuclease|Salmonella newport (strain SL254)

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ALIF1|PUTATIVE pre-16S rRNA nuclease|Aliivibrio fischeri (strain ATCC 700601

Query: 1 KAQNGTPSW 9
KAQ+GTP+W
Sbjct: 35 KAQDGTPNW 43


>sp|YQGF_ALIFM|PUTATIVE pre-16S rRNA nuclease|Aliivibrio fischeri (strain MJ11) (Vibrio

Query: 1 KAQNGTPSW 9
KAQ+GTP+W
Sbjct: 35 KAQDGTPNW 43


>sp|YQGF_SHIDS|PUTATIVE pre-16S rRNA nuclease|Shigella dysenteriae serotype 1 (strain

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ECOSE|PUTATIVE pre-16S rRNA nuclease|Escherichia coli (strain SE11)

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ECO7I|PUTATIVE pre-16S rRNA nuclease|Escherichia coli O7:K1 (strain IAI39

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ECO5E|PUTATIVE pre-16S rRNA nuclease|Escherichia coli O157:H7 (strain EC4115

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ECO57|PUTATIVE pre-16S rRNA nuclease|Escherichia coli O157:H7

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ECOUT|PUTATIVE pre-16S rRNA nuclease|Escherichia coli (strain UTI89 /

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ECOLI|PUTATIVE pre-16S rRNA nuclease|Escherichia coli (strain K12)

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ECOLC|PUTATIVE pre-16S rRNA nuclease|Escherichia coli (strain ATCC 8739

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ECOL6|PUTATIVE pre-16S rRNA nuclease|Escherichia coli O6:H1 (strain CFT073

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ECOL5|PUTATIVE pre-16S rRNA nuclease|Escherichia coli O6:K15:H31 (strain 536

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ECOK1|PUTATIVE pre-16S rRNA nuclease|Escherichia coli O1:K1 / APEC

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ECOHS|PUTATIVE pre-16S rRNA nuclease|Escherichia coli O9:H4 (strain HS)

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ECODH|PUTATIVE pre-16S rRNA nuclease|Escherichia coli (strain K12 /

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ECOBW|PUTATIVE pre-16S rRNA nuclease|Escherichia coli (strain K12 /

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ECO81|PUTATIVE pre-16S rRNA nuclease|Escherichia coli O81 (strain ED1a)

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ECO55|PUTATIVE pre-16S rRNA nuclease|Escherichia coli (strain 55989 /

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ECO45|PUTATIVE pre-16S rRNA nuclease|Escherichia coli O45:K1 (strain S88

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_SHISS|PUTATIVE pre-16S rRNA nuclease|Shigella sonnei (strain Ss046)

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_SHIFL|PUTATIVE pre-16S rRNA nuclease|Shigella flexneri

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_SHIF8|PUTATIVE pre-16S rRNA nuclease|Shigella flexneri serotype 5b (strain

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_SHIBS|PUTATIVE pre-16S rRNA nuclease|Shigella boydii serotype 4 (strain

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_SHIB3|PUTATIVE pre-16S rRNA nuclease|Shigella boydii serotype 18 (strain

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ESCF3|PUTATIVE pre-16S rRNA nuclease|Escherichia fergusonii (strain ATCC 35469

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ECOSM|PUTATIVE pre-16S rRNA nuclease|Escherichia coli (strain SMS-3-5 /

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ECOLU|PUTATIVE pre-16S rRNA nuclease|Escherichia coli O17:K52:H18 (strain UMN026

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ECO8A|PUTATIVE pre-16S rRNA nuclease|Escherichia coli O8 (strain IAI1)

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ECO27|PUTATIVE pre-16S rRNA nuclease|Escherichia coli O127:H6 (strain E2348/69

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_ECO24|PUTATIVE pre-16S rRNA nuclease|Escherichia coli O139:H28 (strain E24377A

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_CROS8|PUTATIVE pre-16S rRNA nuclease|Cronobacter sakazakii (strain ATCC BAA-894)

Query: 1 KAQNGTPSW 9
KAQNG P W
Sbjct: 34 KAQNGNPDW 42


>sp|YQGF_SALAR|PUTATIVE pre-16S rRNA nuclease|Salmonella arizonae (strain ATCC BAA-731

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 34 KAQDGTPDW 42


>sp|YQGF_PSEFL|PUTATIVE pre-16S rRNA nuclease|Pseudomonas fluorescens

Query: 1 KAQNGTPSW 9
KAQNG P W
Sbjct: 35 KAQNGVPDW 43


>sp|YQGF_MANSM|PUTATIVE pre-16S rRNA nuclease|Mannheimia succiniciproducens (strain KCTC

Query: 1 KAQNGTPSW 9
KAQNG P+W
Sbjct: 36 KAQNGIPNW 44


>sp|YQGF_PSEPF|PUTATIVE pre-16S rRNA nuclease|Pseudomonas fluorescens (strain Pf0-1)

Query: 1 KAQNGTPSW 9
KAQNG P W
Sbjct: 35 KAQNGVPDW 43


>sp|YQGF_PSEFS|PUTATIVE pre-16S rRNA nuclease|Pseudomonas fluorescens (strain SBW25)

Query: 1 KAQNGTPSW 9
KAQNG P W
Sbjct: 35 KAQNGIPDW 43


>sp|YQGF_YERPS|PUTATIVE pre-16S rRNA nuclease|Yersinia pseudotuberculosis serotype I

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 35 KAQDGTPDW 43


>sp|YQGF_YERPB|PUTATIVE pre-16S rRNA nuclease|Yersinia pseudotuberculosis serotype IB

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 35 KAQDGTPDW 43


>sp|YQGF_YERE8|PUTATIVE pre-16S rRNA nuclease|Yersinia enterocolitica serotype O:8 /

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 35 KAQDGTPDW 43


>sp|YQGF_YERPY|PUTATIVE pre-16S rRNA nuclease|Yersinia pseudotuberculosis serotype O:3

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 35 KAQDGTPDW 43


>sp|YQGF_YERPP|PUTATIVE pre-16S rRNA nuclease|Yersinia pestis (strain Pestoides F)

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 35 KAQDGTPDW 43


>sp|YQGF_YERPN|PUTATIVE pre-16S rRNA nuclease|Yersinia pestis bv. Antiqua (strain

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 35 KAQDGTPDW 43


>sp|YQGF_YERPG|PUTATIVE pre-16S rRNA nuclease|Yersinia pestis bv. Antiqua (strain

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 35 KAQDGTPDW 43


>sp|YQGF_YERPE|PUTATIVE pre-16S rRNA nuclease|Yersinia pestis

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 35 KAQDGTPDW 43


>sp|YQGF_YERPA|PUTATIVE pre-16S rRNA nuclease|Yersinia pestis bv. Antiqua (strain

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 35 KAQDGTPDW 43


>sp|YQGF_YERP3|PUTATIVE pre-16S rRNA nuclease|Yersinia pseudotuberculosis serotype O:1b

Query: 1 KAQNGTPSW 9
KAQ+GTP W
Sbjct: 35 KAQDGTPDW 43


>sp|YQGF_PSEF5|PUTATIVE pre-16S rRNA nuclease|Pseudomonas fluorescens (strain ATCC

Query: 1 KAQNGTPSW 9
KAQNG P W
Sbjct: 35 KAQNGVPDW 43


>sp|YQGF_PSEU2|PUTATIVE pre-16S rRNA nuclease|Pseudomonas syringae pv. syringae (strain

Query: 1 KAQNGTPSW 9
KAQNG P W
Sbjct: 36 KAQNGVPDW 44


>sp|YQGF_PSESM|PUTATIVE pre-16S rRNA nuclease|Pseudomonas syringae pv. tomato (strain

Query: 1 KAQNGTPSW 9
KAQNG P W
Sbjct: 36 KAQNGVPDW 44


>sp|YQGF_PSEPK|PUTATIVE pre-16S rRNA nuclease|Pseudomonas putida (strain ATCC 47054

Query: 1 KAQNGTPSWG 10
KAQNG P W
Sbjct: 36 KAQNGVPDWA 45




109|Sequence|541|550|TPSWGGYPSI

>sp|HGP1_HAEIN|PROBABLE hemoglobin and hemoglobin-haptoglobin-binding protein|Haemophilus

Query: 1 TPSWGGYP 8
TPSW G+P
Sbjct: 502 TPSWNGFP 509


>sp|TOLB_CHLCV|PROTEIN TolB homolog|Chlamydia caviae (strain ATCC VR-813

Query: 2 PSWGGYPS 9
PSWGG+P+
Sbjct: 418 PSWGGFPN 425


>sp|TOLB_CHLFF|PROTEIN TolB homolog|Chlamydia felis (strain Fe/C-56) (Chlamydophila

Query: 2 PSWGGYPS 9
PSWGG+P+
Sbjct: 418 PSWGGFPN 425




110|Sequence|546|555|GYPSIHAAYQ

>sp|DER_ACIBS|GTPASE Der|Acinetobacter baumannii (strain SDF)

Query: 2 YPSIHAAYQ 10
YPSIH AY+
Sbjct: 339 YPSIHRAYE 347


>sp|DER_ACIB5|GTPASE Der|Acinetobacter baumannii (strain AB0057)

Query: 2 YPSIHAAYQ 10
YPSIH AY+
Sbjct: 339 YPSIHRAYE 347


>sp|DER_ACIBY|GTPASE Der|Acinetobacter baumannii (strain AYE)

Query: 2 YPSIHAAYQ 10
YPSIH AY+
Sbjct: 339 YPSIHRAYE 347


>sp|DER_ACIBT|GTPASE Der|Acinetobacter baumannii (strain ATCC 17978

Query: 2 YPSIHAAYQ 10
YPSIH AY+
Sbjct: 339 YPSIHRAYE 347


>sp|DER_ACIBC|GTPASE Der|Acinetobacter baumannii (strain ACICU)

Query: 2 YPSIHAAYQ 10
YPSIH AY+
Sbjct: 339 YPSIHRAYE 347


>sp|DER_ACIB3|GTPASE Der|Acinetobacter baumannii (strain AB307-0294)

Query: 2 YPSIHAAYQ 10
YPSIH AY+
Sbjct: 339 YPSIHRAYE 347


>sp|DER_PSYWF|GTPASE Der|Psychrobacter sp. (strain PRwf-1)

Query: 2 YPSIHAAY 9
YPSIH AY
Sbjct: 340 YPSIHKAY 347




111|Sequence|551|560|HAAYQLPNMM

***** No hits found ******


112|Sequence|556|565|LPNMMKLSLG

***** No hits found ******


113|Sequence|561|570|KLSLGSSGKS

***** No hits found ******


114|Sequence|566|575|SSGKSTPLKP

***** No hits found ******


115|Sequence|571|580|TPLKPMFGNS

***** No hits found ******


116|Sequence|576|585|MFGNSEIVSP

***** No hits found ******


117|Sequence|581|590|EIVSPTKNQT

***** No hits found ******


118|Sequence|586|595|TKNQTLVSPP

***** No hits found ******


119|Sequence|591|600|LVSPPSSQTS

***** No hits found ******


120|Sequence|596|605|SSQTSPMPKT

***** No hits found ******


121|Sequence|601|610|PMPKTNFHAM

***** No hits found ******


122|Sequence|606|615|NFHAMEELVK

***** No hits found ******


123|Sequence|611|620|EELVKKVTEK

***** No hits found ******


124|Sequence|616|625|KVTEKVAKVE

***** No hits found ******


125|Sequence|621|630|VAKVEEKMKE

***** No hits found ******


126|Sequence|626|635|EKMKEPDGKL

***** No hits found ******


127|Sequence|631|640|PDGKLSPPKR

>sp|COXX_BART1|PROTOHEME IX farnesyltransferase|Bartonella tribocorum (strain DSM 28219

Query: 1 PDGKLSPPK 9
P GK+SPPK
Sbjct: 94 PMGKISPPK 102


>sp|NUOD1_RHIME|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium meliloti (strain 1021)

Query: 2 DGKLSPPKR 10
DGK+ PPKR
Sbjct: 293 DGKIVPPKR 301


>sp|NUOD1_SINMW|NADH-QUINONE oxidoreductase subunit D 1|Sinorhizobium medicae (strain WSM419)

Query: 2 DGKLSPPKR 10
DGK+ PPKR
Sbjct: 293 DGKIVPPKR 301


>sp|NUOD_RUEPO|NADH-QUINONE oxidoreductase subunit D|Ruegeria pomeroyi (strain ATCC 700808

Query: 3 GKLSPPKR 10
GKL+PPKR
Sbjct: 303 GKLTPPKR 310


>sp|NUOD_RUEST|NADH-QUINONE oxidoreductase subunit D|Ruegeria sp. (strain TM1040) (Silicibacter

Query: 3 GKLSPPKR 10
GKL+PPKR
Sbjct: 301 GKLTPPKR 308


>sp|NUOD_RHIJ3|NADH-QUINONE oxidoreductase subunit D|Rhizobium johnstonii (strain DSM 114642

Query: 2 DGKLSPPKR 10
DGK+ PPKR
Sbjct: 293 DGKVVPPKR 301


>sp|NUOD_RHOCA|NADH-QUINONE oxidoreductase subunit D|Rhodobacter capsulatus (Rhodopseudomonas

Query: 3 GKLSPPKR 10
GKL+PPKR
Sbjct: 311 GKLTPPKR 318


>sp|NUOD_RHILW|NADH-QUINONE oxidoreductase subunit D|Rhizobium leguminosarum bv. trifolii

Query: 2 DGKLSPPKR 10
DGK+ PPKR
Sbjct: 293 DGKVVPPKR 301


>sp|NUOD1_RHIE6|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain CIAT 652)

Query: 2 DGKLSPPKR 10
DGK+ PPKR
Sbjct: 293 DGKVVPPKR 301


>sp|NUOD1_RHIEC|NADH-QUINONE oxidoreductase subunit D 1|Rhizobium etli (strain ATCC 51251

Query: 2 DGKLSPPKR 10
DGK+ PPKR
Sbjct: 293 DGKVVPPKR 301




128|Sequence|636|645|SPPKRATPSP

***** No hits found ******


129|Sequence|641|650|ATPSPCSSEV

***** No hits found ******


130|Sequence|646|655|CSSEVGEPIK

***** No hits found ******


131|Sequence|651|660|GEPIKMEASS

***** No hits found ******


132|Sequence|656|665|MEASSDGGFR

***** No hits found ******


133|Sequence|661|670|DGGFRSQENS

***** No hits found ******


134|Sequence|666|675|SQENSPSPPR

***** No hits found ******


135|Sequence|671|680|PSPPRDGCKD

>sp|Y1812_CALS4|UNCHARACTERIZED RNA methyltransferase TTE1812|Caldanaerobacter subterraneus subsp.

Query: 3 PPRDGC 8
PPRDGC
Sbjct: 383 PPRDGC 388


>sp|QUEA_CHLT3|S-ADENOSYLMETHIONINE:TRNA ribosyltransferase-isomerase|Chloroherpeton thalassium (strain

Query: 1 PSPPRDGCK 9
PS PRD CK
Sbjct: 19 PSEPRDSCK 27




136|Sequence|676|685|DGCKDGSPLA

***** No hits found ******


137|Sequence|681|690|GSPLAEPVEN

***** No hits found ******


138|Sequence|686|695|EPVENGKELV

***** No hits found ******


139|Sequence|691|700|GKELVKPLAS

***** No hits found ******


140|Sequence|696|705|KPLASSLSGS

***** No hits found ******


141|Sequence|701|710|SLSGSTAIIT

***** No hits found ******


142|Sequence|706|715|TAIITDHPPE

***** No hits found ******


143|Sequence|711|720|DHPPEQPFVN

>sp|NANE_ENTFA|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase|Enterococcus faecalis

Query: 1 DHPPEQPFV 9
D+PPE+PF+
Sbjct: 75 DYPPEEPFI 83


>sp|NANE_STRSY|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase|Streptococcus suis

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 78 DYPPQEPFI 86


>sp|NANE_STRSE|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase|Streptococcus suis

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 78 DYPPQEPFI 86


>sp|NANE_STRSU|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase|Streptococcus suis

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 78 DYPPQEPFI 86


>sp|NANE1_STRR6|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase 1|Streptococcus

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 78 DYPPQEPFI 86


>sp|NANE_STRSV|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase|Streptococcus

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 78 DYPPQEPFI 86


>sp|NANE_STRGC|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase|Streptococcus

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 78 DYPPQEPFI 86


>sp|TSAD_STRMK|TRNA N6-adenosine threonylcarbamoyltransferase|Stenotrophomonas

Query: 1 DHPPEQPFV 9
D PPE PFV
Sbjct: 127 DDPPEAPFV 135


>sp|TSAD_SALTY|TRNA N6-adenosine threonylcarbamoyltransferase|Salmonella typhimurium

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_SALHS|TRNA N6-adenosine threonylcarbamoyltransferase|Salmonella heidelberg

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_SALG2|TRNA N6-adenosine threonylcarbamoyltransferase|Salmonella gallinarum

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_SALEP|TRNA N6-adenosine threonylcarbamoyltransferase|Salmonella enteritidis

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_SALDC|TRNA N6-adenosine threonylcarbamoyltransferase|Salmonella dublin (strain

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_SALA4|TRNA N6-adenosine threonylcarbamoyltransferase|Salmonella agona (strain

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_ECO57|TRNA N6-adenosine threonylcarbamoyltransferase|Escherichia coli O157:H7

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_SALPB|TRNA N6-adenosine threonylcarbamoyltransferase|Salmonella paratyphi B

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_SALNS|TRNA N6-adenosine threonylcarbamoyltransferase|Salmonella newport

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_CITK8|TRNA N6-adenosine threonylcarbamoyltransferase|Citrobacter koseri

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_SHISS|TRNA N6-adenosine threonylcarbamoyltransferase|Shigella sonnei (strain

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_SHIFL|TRNA N6-adenosine threonylcarbamoyltransferase|Shigella flexneri

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_SHIF8|TRNA N6-adenosine threonylcarbamoyltransferase|Shigella flexneri

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_SHIDS|TRNA N6-adenosine threonylcarbamoyltransferase|Shigella dysenteriae

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_SHIBS|TRNA N6-adenosine threonylcarbamoyltransferase|Shigella boydii serotype

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_SHIB3|TRNA N6-adenosine threonylcarbamoyltransferase|Shigella boydii serotype

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_ESCF3|TRNA N6-adenosine threonylcarbamoyltransferase|Escherichia fergusonii

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_ECOSE|TRNA N6-adenosine threonylcarbamoyltransferase|Escherichia coli (strain

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_ECOLU|TRNA N6-adenosine threonylcarbamoyltransferase|Escherichia coli

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_ECOLI|TRNA N6-adenosine threonylcarbamoyltransferase|Escherichia coli (strain

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_ECOLC|TRNA N6-adenosine threonylcarbamoyltransferase|Escherichia coli (strain

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_ECOHS|TRNA N6-adenosine threonylcarbamoyltransferase|Escherichia coli O9:H4

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_ECODH|TRNA N6-adenosine threonylcarbamoyltransferase|Escherichia coli (strain

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_ECOBW|TRNA N6-adenosine threonylcarbamoyltransferase|Escherichia coli (strain

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_ECO8A|TRNA N6-adenosine threonylcarbamoyltransferase|Escherichia coli O8

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_ECO7I|TRNA N6-adenosine threonylcarbamoyltransferase|Escherichia coli O7:K1

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_ECO5E|TRNA N6-adenosine threonylcarbamoyltransferase|Escherichia coli O157:H7

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_ECO55|TRNA N6-adenosine threonylcarbamoyltransferase|Escherichia coli (strain

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_ECO27|TRNA N6-adenosine threonylcarbamoyltransferase|Escherichia coli O127:H6

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_ECO24|TRNA N6-adenosine threonylcarbamoyltransferase|Escherichia coli O139:H28

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_CROS8|TRNA N6-adenosine threonylcarbamoyltransferase|Cronobacter sakazakii

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_XANOR|TRNA N6-adenosine threonylcarbamoyltransferase|Xanthomonas oryzae pv.

Query: 1 DHPPEQPFV 9
D PPE PFV
Sbjct: 127 DDPPEPPFV 135


>sp|TSAD_XANOP|TRNA N6-adenosine threonylcarbamoyltransferase|Xanthomonas oryzae pv.

Query: 1 DHPPEQPFV 9
D PPE PFV
Sbjct: 127 DDPPEPPFV 135


>sp|TSAD_XANOM|TRNA N6-adenosine threonylcarbamoyltransferase|Xanthomonas oryzae pv.

Query: 1 DHPPEQPFV 9
D PPE PFV
Sbjct: 127 DDPPEPPFV 135


>sp|TSAD_ERWT9|TRNA N6-adenosine threonylcarbamoyltransferase|Erwinia tasmaniensis

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_ECOUT|TRNA N6-adenosine threonylcarbamoyltransferase|Escherichia coli (strain

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_ECOL6|TRNA N6-adenosine threonylcarbamoyltransferase|Escherichia coli O6:H1

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_ECOL5|TRNA N6-adenosine threonylcarbamoyltransferase|Escherichia coli

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_ECOK1|TRNA N6-adenosine threonylcarbamoyltransferase|Escherichia coli O1:K1 /

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_ECO81|TRNA N6-adenosine threonylcarbamoyltransferase|Escherichia coli O81

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|TSAD_ECO45|TRNA N6-adenosine threonylcarbamoyltransferase|Escherichia coli O45:K1

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|NANE_STRPZ|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase|Streptococcus

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 79 DYPPQEPFI 87


>sp|NANE_STRPD|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase|Streptococcus

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 79 DYPPQEPFI 87


>sp|NANE_STRP6|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase|Streptococcus

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 79 DYPPQEPFI 87


>sp|NANE_STRPG|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase|Streptococcus

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 79 DYPPQEPFI 87


>sp|NANE_STRPQ|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase|Streptococcus

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 79 DYPPQEPFI 87


>sp|NANE_STRPM|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase|Streptococcus

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 79 DYPPQEPFI 87


>sp|NANE_STRPC|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase|Streptococcus

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 79 DYPPQEPFI 87


>sp|NANE_STRPB|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase|Streptococcus

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 79 DYPPQEPFI 87


>sp|NANE_STRP3|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase|Streptococcus

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 79 DYPPQEPFI 87


>sp|NANE_STRPF|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase|Streptococcus

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 79 DYPPQEPFI 87


>sp|NANE_STRP8|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase|Streptococcus

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 79 DYPPQEPFI 87


>sp|NANE_STRP1|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase|Streptococcus

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 79 DYPPQEPFI 87


>sp|NANE_STRZT|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase|Streptococcus

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 78 DYPPQEPFI 86


>sp|NANE_STRP7|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase|Streptococcus

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 78 DYPPQEPFI 86


>sp|NANE2_STRR6|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase 2|Streptococcus

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 78 DYPPQEPFI 86


>sp|NANE2_STRPN|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase 2|Streptococcus

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 78 DYPPQEPFI 86


>sp|NANE_LACLA|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase|Lactococcus lactis

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 75 DYPPQKPFI 83


>sp|TSAD_ALISL|TRNA N6-adenosine threonylcarbamoyltransferase|Aliivibrio salmonicida

Query: 1 DHPPEQPFV 9
D+PPE PFV
Sbjct: 123 DNPPEFPFV 131


>sp|SYE_COLP3|GLUTAMATE--TRNA ligase|Colwellia psychrerythraea (strain 34H /

Query: 1 DHPPEQPFV 9
DHP ++PFV
Sbjct: 130 DHPADKPFV 138


>sp|NANE_STRU0|PUTATIVE N-acetylmannosamine-6-phosphate 2-epimerase|Streptococcus uberis

Query: 1 DHPPEQPFV 9
D+PP++PF+
Sbjct: 79 DYPPQEPFI 87




144|Sequence|716|725|QPFVNPLSAL

***** No hits found ******


145|Sequence|721|730|PLSALQSVMN

***** No hits found ******


146|Sequence|726|735|QSVMNIHLGK

***** No hits found ******


147|Sequence|731|740|IHLGKAAKPS

***** No hits found ******


148|Sequence|736|745|AAKPSLPALD

***** No hits found ******


149|Sequence|741|750|LPALDPMSML

***** No hits found ******


150|Sequence|746|755|PMSMLFKMSN

***** No hits found ******


151|Sequence|751|760|FKMSNSLAEK

***** No hits found ******


152|Sequence|756|765|SLAEKAAVAT

***** No hits found ******


153|Sequence|761|770|AAVATPPPLQ

***** No hits found ******


154|Sequence|766|775|PPPLQSKKAD

***** No hits found ******


155|Sequence|771|780|SKKADHLDRY

>sp|MURD_SYNC1|UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE ligase|Syntrophotalea carbinolica (strain DSM 2380

Query: 4 ADHLDRY 10
ADHLDRY
Sbjct: 186 ADHLDRY 192




156|Sequence|776|785|HLDRYFYHVN

***** No hits found ******


157|Sequence|781|790|FYHVNNDQPI

***** No hits found ******


158|Sequence|786|795|NDQPIDLTKG

***** No hits found ******


159|Sequence|791|800|DLTKGKSDKG

***** No hits found ******


160|Sequence|796|805|KSDKGCSLGS

***** No hits found ******


161|Sequence|801|810|CSLGSVLLSP

***** No hits found ******


162|Sequence|806|815|VLLSPTSTAP

***** No hits found ******


163|Sequence|811|820|TSTAPATSSS

***** No hits found ******


164|Sequence|816|825|ATSSSTVTTA

***** No hits found ******


165|Sequence|821|830|TVTTAKTSAV

***** No hits found ******


166|Sequence|826|835|KTSAVVSFMS

***** No hits found ******


167|Sequence|831|840|VSFMSNSPLR

***** No hits found ******


168|Sequence|836|845|NSPLRENALS

***** No hits found ******


169|Sequence|841|850|ENALSDISDM

***** No hits found ******


170|Sequence|846|855|DISDMLKNLT

***** No hits found ******


171|Sequence|851|860|LKNLTESHTS

***** No hits found ******


172|Sequence|856|865|ESHTSKSSTP

>sp|MRAY_PARC0|PHOSPHO-N-ACETYLMURAMOYL-PENTAPEPTIDE-TRANSFERASE citrulli (strain AAC00-1) (Acidovorax

Query: 1 ESHTSKSSTP 10
ESH SKS TP
Sbjct: 66 ESHLSKSGTP 75


>sp|MRAY_COLP3|PHOSPHO-N-ACETYLMURAMOYL-PENTAPEPTIDE-TRANSFERASE psychrerythraea (strain 34H /

Query: 1 ESHTSKSSTP 10
ESH SKS TP
Sbjct: 63 ESHLSKSGTP 72


>sp|MRAY_SHEVD|PHOSPHO-N-ACETYLMURAMOYL-PENTAPEPTIDE-TRANSFERASE violacea (strain JCM 10179

Query: 1 ESHTSKSSTP 10
ESH SKS TP
Sbjct: 63 ESHFSKSGTP 72




173|Sequence|861|870|KSSTPSSISE

***** No hits found ******


174|Sequence|866|875|SSISEKSDID

***** No hits found ******


175|Sequence|871|880|KSDIDGATLE

***** No hits found ******


176|Sequence|876|885|GATLEEAEES

***** No hits found ******


177|Sequence|881|890|EAEESTPAQK

***** No hits found ******


178|Sequence|886|895|TPAQKRKGRQ

***** No hits found ******


179|Sequence|891|900|RKGRQSNWNP

>sp|PSBA1_SYNS9|PHOTOSYSTEM II protein D1 1|Synechococcus sp. (strain CC9902)

Query: 1 RKGRQSNW 8
R GRQSNW
Sbjct: 6 RSGRQSNW 13


>sp|PSBA2_PARMW|PHOTOSYSTEM II protein D1 2|Parasynechococcus marenigrum (strain WH8102)

Query: 1 RKGRQSNW 8
R GRQSNW
Sbjct: 6 RSGRQSNW 13


>sp|PSBA2_SYNSC|PHOTOSYSTEM II protein D1 2|Synechococcus sp. (strain CC9605)

Query: 1 RKGRQSNW 8
R GRQSNW
Sbjct: 6 RSGRQSNW 13




180|Sequence|896|905|SNWNPQHLLI

>sp|SYM_BACC3|METHIONINE--TRNA ligase|Bacillus cereus (strain 03BB102)

Query: 2 NWNPQHLL 9
NW PQH L
Sbjct: 506 NWEPQHTL 513


>sp|SYM_BACC0|METHIONINE--TRNA ligase|Bacillus cereus (strain AH820)

Query: 2 NWNPQHLL 9
NW PQH L
Sbjct: 506 NWEPQHTL 513


>sp|SYM1_BACHK|METHIONINE--TRNA ligase 1|Bacillus thuringiensis subsp. konkukian (strain

Query: 2 NWNPQHLL 9
NW PQH L
Sbjct: 506 NWEPQHTL 513


>sp|SYM1_BACAH|METHIONINE--TRNA ligase 1|Bacillus thuringiensis (strain Al Hakam)

Query: 2 NWNPQHLL 9
NW PQH L
Sbjct: 506 NWEPQHTL 513


>sp|SYM_BACAC|METHIONINE--TRNA ligase|Bacillus anthracis (strain CDC 684

Query: 2 NWNPQHLL 9
NW PQH L
Sbjct: 506 NWEPQHTL 513


>sp|SYM_BACAA|METHIONINE--TRNA ligase|Bacillus anthracis (strain A0248)

Query: 2 NWNPQHLL 9
NW PQH L
Sbjct: 506 NWEPQHTL 513


>sp|SYM2_BACAN|METHIONINE--TRNA ligase 2|Bacillus anthracis

Query: 2 NWNPQHLL 9
NW PQH L
Sbjct: 506 NWEPQHTL 513


>sp|SYM_BACC7|METHIONINE--TRNA ligase|Bacillus cereus (strain AH187)

Query: 2 NWNPQHLL 9
NW PQH L
Sbjct: 506 NWEPQHTL 513




181|Sequence|901|910|QHLLILQAQF

***** No hits found ******


182|Sequence|906|915|LQAQFAASLR

***** No hits found ******


183|Sequence|911|920|AASLRQTSEG

***** No hits found ******


184|Sequence|916|925|QTSEGKYIMS

***** No hits found ******


185|Sequence|921|930|KYIMSDLSPQ

***** No hits found ******


186|Sequence|926|935|DLSPQERMHI

***** No hits found ******


187|Sequence|931|940|ERMHISRFTG

***** No hits found ******


188|Sequence|936|945|SRFTGLSMTT

***** No hits found ******


189|Sequence|941|950|LSMTTISHWL

***** No hits found ******


190|Sequence|946|955|ISHWLANVKY

***** No hits found ******


191|Sequence|951|960|ANVKYQLRRT

***** No hits found ******


192|Sequence|956|965|QLRRTGGTKF

***** No hits found ******


193|Sequence|961|970|GGTKFLKNLD

***** No hits found ******


194|Sequence|966|975|LKNLDTGHPV

***** No hits found ******


195|Sequence|971|980|TGHPVFFCND

>sp|YPZH_BACSU|UNCHARACTERIZED protein YpzH|Bacillus subtilis (strain 168)

Query: 2 GHPVFFCND 10
G PVFFCND
Sbjct: 23 GAPVFFCND 31


>sp|MNMA_THEM4|TRNA-SPECIFIC 2-thiouridylase MnmA|Thermosipho melanesiensis (strain DSM 12029

Query: 1 TGHPVFFCND 10
T +P FFCND
Sbjct: 77 TPNPCFFCND 86


>sp|MNMA_FERNB|TRNA-SPECIFIC 2-thiouridylase MnmA|Fervidobacterium nodosum (strain ATCC 35602

Query: 1 TGHPVFFCND 10
T +P FFCND
Sbjct: 98 TPNPCFFCND 107


>sp|SYI_DESRM|ISOLEUCINE--TRNA ligase|Desulforamulus reducens (strain ATCC BAA-1160

Query: 4 PVFFCND 10
P+F+CND
Sbjct: 464 PIFYCND 470




196|Sequence|976|985|FFCNDCASQI

>sp|SYI_DESRM|ISOLEUCINE--TRNA ligase|Desulforamulus reducens (strain ATCC BAA-1160

Query: 1 FFCNDCASQI 10
F+CNDC +I
Sbjct: 466 FYCNDCGKEI 475




197|Sequence|981|990|CASQIRTPST

***** No hits found ******


198|Sequence|986|995|RTPSTYISHL

***** No hits found ******


199|Sequence|991|1000|YISHLESHLG

>sp|COQ7_DELAS|3-DEMETHOXYUBIQUINOL 3-hydroxylase|Delftia acidovorans (strain DSM 14801

Query: 3 SHLESHLG 10
+HLESHLG
Sbjct: 141 AHLESHLG 148


>sp|COQ7_VARPS|3-DEMETHOXYUBIQUINOL 3-hydroxylase|Variovorax paradoxus (strain S110)

Query: 3 SHLESHLG 10
+HLESHLG
Sbjct: 145 AHLESHLG 152




200|Sequence|996|1005|ESHLGFRLRD

>sp|SYE_STUS1|GLUTAMATE--TRNA ligase|Stutzerimonas stutzeri (strain A1501) (Pseudomonas

Query: 3 HLGFRLRD 10
HLGF+LRD
Sbjct: 426 HLGFKLRD 433




201|Sequence|1001|1010|FRLRDLSKLS

***** No hits found ******


202|Sequence|1006|1015|LSKLSTEQIN

***** No hits found ******


203|Sequence|1011|1020|TEQINSQIAQ

***** No hits found ******


204|Sequence|1016|1025|SQIAQTKSPS

***** No hits found ******


205|Sequence|1021|1030|TKSPSEKMVT

***** No hits found ******


206|Sequence|1026|1035|EKMVTSSPEE

***** No hits found ******


207|Sequence|1031|1040|SSPEEDLGTS

***** No hits found ******


208|Sequence|1036|1045|DLGTSYQCKL

***** No hits found ******


209|Sequence|1041|1050|YQCKLCNRTF

>sp|PRPR_MYCTU|HTH-TYPE transcriptional regulator PrpR|Mycobacterium tuberculosis (strain

Query: 3 CKLCNRT 9
CK+CNRT
Sbjct: 447 CKICNRT 453




210|Sequence|1046|1055|CNRTFASKHA

***** No hits found ******


211|Sequence|1051|1060|ASKHAVKLHL

***** No hits found ******


212|Sequence|1056|1065|VKLHLSKTHG

***** No hits found ******


213|Sequence|1061|1070|SKTHGKSPED

***** No hits found ******


214|Sequence|1066|1075|KSPEDHLLYV

***** No hits found ******


215|Sequence|1071|1081|HLLYVSELEKQ

***** No hits found ******




THE END