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1|Sequence|1|10|MGTSPSSSTA

>sp|M1_I83A1|MATRIX protein 1|Influenza A virus (strain A/Chile/1/1983

Query: 1   MGTSPSSST 9
           +GT PSSST
Sbjct: 219 IGTHPSSST 227


>sp|M1_I89A2|MATRIX protein 1|Influenza A virus (strain A/Beijing/353/1989

Query: 1   MGTSPSSST 9
           +GT PSSST
Sbjct: 219 IGTHPSSST 227


>sp|M1_I07A0|MATRIX protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007

Query: 1   MGTSPSSST 9
           +GT PSSST
Sbjct: 216 IGTHPSSST 224


>sp|M1_I77AA|MATRIX protein 1|Influenza A virus (strain A/Brazil/11/1978

Query: 1   MGTSPSSST 9
           +GT PSSST
Sbjct: 219 IGTHPSSST 227


>sp|M1_I67A0|MATRIX protein 1|Influenza A virus (strain A/Tokyo/3/1967

Query: 1   MGTSPSSST 9
           +GT PSSST
Sbjct: 219 IGTHPSSST 227


>sp|M1_I96A3|MATRIX protein 1|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 1   MGTSPSSST 9
           +GT PSSST
Sbjct: 219 IGTHPSSST 227


>sp|M1_I96A2|MATRIX protein 1|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 1   MGTSPSSST 9
           +GT PSSST
Sbjct: 219 IGTHPSSST 227


>sp|M1_I00A1|MATRIX protein 1|Influenza A virus (strain A/New

Query: 1   MGTSPSSST 9
           +GT PSSST
Sbjct: 219 IGTHPSSST 227


>sp|M1_I02A1|MATRIX protein 1|Influenza A virus (strain A/Guinea

Query: 1   MGTSPSSST 9
           +GT P+SST
Sbjct: 212 IGTHPNSST 220


>sp|M1_I02A4|MATRIX protein 1|Influenza A virus (strain A/Silky

Query: 1   MGTSPSSST 9
           +GT P+SST
Sbjct: 219 IGTHPNSST 227


>sp|M1_I02A2|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 1   MGTSPSSST 9
           +GT P+SST
Sbjct: 219 IGTHPNSST 227


>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5   PSSSTA 10
           PSSSTA
Sbjct: 807 PSSSTA 812


>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5   PSSSTA 10
           PSSSTA
Sbjct: 807 PSSSTA 812


>sp|M1_I88A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/8/1988

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I82A2|MATRIX protein 1|Influenza A virus (strain A/Camel/Mongolia/1982

Query: 1  MGTSPSSS 8
          +GT PSSS
Sbjct: 76 IGTHPSSS 83


>sp|M1_I85A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Netherlands/12/1985

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I60A0|MATRIX protein 1|Influenza A virus (strain A/Ann

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I82A7|MATRIX protein 1|Influenza A virus (strain A/Swine/Hong

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I78A8|MATRIX protein 1|Influenza A virus (strain A/Memphis/18/1978

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I76A6|MATRIX protein 1|Influenza A virus (strain A/Memphis/110/1976

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I75A0|MATRIX protein 1|Influenza A virus (strain A/Beijing/39/1975

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I73A5|MATRIX protein 1|Influenza A virus (strain A/Port

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I72A8|MATRIX protein 1|Influenza A virus (strain A/Udorn/1972

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I72A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/101/1972

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I72A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/102/1972

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I72A2|MATRIX protein 1|Influenza A virus (strain A/Udorn/307/1972

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I71A1|MATRIX protein 1|Influenza A virus (strain A/Memphis/1/1971

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I70A0|MATRIX protein 1|Influenza A virus (strain A/Qu/7/1970

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I57A3|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I57A2|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I57A1|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/1957

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I43A0|MATRIX protein 1|Influenza A virus (strain A/USA:Iowa/1943

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I40A0|MATRIX protein 1|Influenza A virus (strain A/Hickox/1940

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I000X|MATRIX protein 1|Influenza A virus (strain A/X-31

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I88A5|MATRIX protein 1|Influenza A virus (strain A/Swine/Iowa/17672/1988

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I85A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I83A8|MATRIX protein 1|Influenza A virus (strain A/Hong

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I82A9|MATRIX protein 1|Influenza A virus (strain A/Philippines/2/1982

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I80A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/4/1980

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I78A7|MATRIX protein 1|Influenza A virus (strain A/Memphis/2/1978

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I78A3|MATRIX protein 1|Influenza A virus (strain A/Mallard/New

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I77A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I69A0|MATRIX protein 1|Influenza A virus (strain A/England/878/1969

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I68A4|MATRIX protein 1|Influenza A virus (strain A/Hong

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I54A2|MATRIX protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I51A0|MATRIX protein 1|Influenza A virus (strain A/USA:Albany/12/1951

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I45A0|MATRIX protein 1|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I35A3|MATRIX protein 1|Influenza A virus (strain A/USA:Phila/1935

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I88A7|MATRIX protein 1|Influenza A virus (strain A/Wisconsin/3523/1988

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I81A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Ontario/2/1981

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I80A2|MATRIX protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I77AC|MATRIX protein 1|Influenza A virus (strain A/Swine/Tennessee/24/1977

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I77AB|MATRIX protein 1|Influenza A virus (strain A/USSR/90/1977

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I77A9|MATRIX protein 1|Influenza A virus (strain A/Equine/New

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I67A2|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I59A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Scotland/1959

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I57A0|MATRIX protein 1|Influenza A virus (strain A/Japan/305/1957

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I37A0|MATRIX protein 1|Influenza A virus (strain A/Swine/29/1937

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I36A0|MATRIX protein 1|Influenza A virus (strain A/Henry/1936

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I34A1|MATRIX protein 1|Influenza A virus (strain A/Puerto

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I33A0|MATRIX protein 1|Influenza A virus (strain A/Wilson-Smith/1933

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I18A0|MATRIX protein 1|Influenza A virus (strain A/Brevig

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I06A0|MATRIX protein 1|Influenza A virus (strain A/Russia:St.Petersburg/8/2006

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I96A0|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I79A0|MATRIX protein 1|Influenza A virus (strain A/Bangkok/1/1979

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I61A1|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I54A1|MATRIX protein 1|Influenza A virus (strain A/Swine/May/1954

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I01A0|MATRIX protein 1|Influenza A virus (strain A/Silky

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I97A1|MATRIX protein 1|Influenza A virus (strain A/Hong

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I97A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I02A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I02A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Brescia/1902

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I80AA|MATRIX protein 1|Influenza A virus (strain A/India/6263/1980

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 IGTHPSSS 226


>sp|M1_I000F|MATRIX protein 1|Influenza A virus (strain A/Chicken/Weybridge

Query: 1   MGTSPSSS 8
           +GT PSSS
Sbjct: 219 VGTHPSSS 226


>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)

Query: 1   MGTSPSSST 9
           +G SP SST
Sbjct: 325 LGRSPGSST 333


>sp|M1_I56A3|MATRIX protein 1|Influenza A virus (strain A/Equine/Prague/1/1956

Query: 1   MGTSPSSSTA 10
           +GT P+SST 
Sbjct: 219 VGTHPNSSTG 228




2|Sequence|6|15|SSSTALASCS

>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)

Query: 1   SSSTALASCS 10
           SS TA+A C+
Sbjct: 498 SSDTAIAECA 507


>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   SSSTALASCS 10
           SS TA+A C+
Sbjct: 499 SSDTAIAECA 508


>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate

Query: 3   STALASCS 10
           +TALA C+
Sbjct: 286 NTALAKCN 293


>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate

Query: 3   STALASCS 10
           +TALA C+
Sbjct: 290 NTALAKCN 297




3|Sequence|11|20|LASCSRIARR

>sp|ICP27_EBVG|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2   ASCSRIAR 9
           ASCSR+ R
Sbjct: 452 ASCSRLVR 459


>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)

Query: 2   ASCSRIAR 9
           ASCSR+ R
Sbjct: 452 ASCSRLVR 459


>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)

Query: 2   ASCSRIAR 9
           ASCSR+ R
Sbjct: 452 ASCSRLVR 459


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1    LASCSRI 7
            +A CSRI
Sbjct: 5637 IAKCSRI 5643


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 3   SCSRIARR 10
           SCSR+  R
Sbjct: 944 SCSRLFNR 951


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 3   SCSRIARR 10
           SCSR+  R
Sbjct: 944 SCSRLFNR 951


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 3   SCSRIARR 10
           SCSR+  R
Sbjct: 950 SCSRLFNR 957


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 3   SCSRIARR 10
           SCSR+  R
Sbjct: 950 SCSRLFNR 957


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 3   SCSRIARR 10
           SCSR+  R
Sbjct: 950 SCSRLFNR 957




4|Sequence|16|25|RIARRATATM

>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)

Query: 1   RIARRATATM 10
           RIARRA  T+
Sbjct: 728 RIARRAFPTL 737


Query: 2  IARRATATM 10
          I +RATAT+
Sbjct: 81 ICQRATATL 89


>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)

Query: 2  IARRATATM 10
          I +RATAT+
Sbjct: 82 ICQRATATL 90


>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)

Query: 2  IARRATATM 10
          I +RATAT+
Sbjct: 80 ICQRATATL 88


>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)

Query: 2  IARRATATM 10
          I +RATAT+
Sbjct: 81 ICQRATATL 89


>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)

Query: 2  IARRATATM 10
          I +RATAT+
Sbjct: 83 ICQRATATL 91




5|Sequence|21|30|ATATMIAGSL

>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 1   ATATMIAG 8
           ATA +IAG
Sbjct: 348 ATAVLIAG 355


>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)

Query: 1   ATATMIAG 8
           ATA +IAG
Sbjct: 347 ATAVLIAG 354


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 1   ATATMIAG 8
           ATA +IAG
Sbjct: 347 ATAVLIAG 354


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 1   ATATMIAG 8
           ATA +IAG
Sbjct: 347 ATAVLIAG 354


>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)

Query: 1   ATATMIAG 8
           ATA +IAG
Sbjct: 347 ATAVLIAG 354


>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)

Query: 1   ATATMIAG 8
           ATA +IAG
Sbjct: 347 ATAVLIAG 354


>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)

Query: 1   ATATMIAG 8
           ATA +IAG
Sbjct: 347 ATAVLIAG 354


>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)

Query: 1   ATATMIAG 8
           ATA +IAG
Sbjct: 348 ATAVLIAG 355


>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   ATATMIAGSL 10
           A +TM AGSL
Sbjct: 517 AGSTMGAGSL 526




6|Sequence|26|35|IAGSLLLLGF

>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 2   AGSLLLLGF 10
           AG LLLLGF
Sbjct: 828 AGVLLLLGF 836


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1    IAGSLLLLG 9
            + GSL++LG
Sbjct: 1156 LVGSLVMLG 1164


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 1    IAGSLLL 7
            IAG+LLL
Sbjct: 2226 IAGTLLL 2232


>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)

Query: 2   AGSLLLLGF 10
           +G+L+ LGF
Sbjct: 122 SGTLVSLGF 130


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1    IAGSLLLLGF 10
            +AG LLL  +
Sbjct: 1377 VAGGLLLAAY 1386


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1    IAGSLLLLGF 10
            +AG LLL  +
Sbjct: 1377 VAGGLLLAAY 1386


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1    IAGSLLLLGF 10
            +AG LLL  +
Sbjct: 1377 VAGGLLLAAY 1386


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1    IAGSLLLLGF 10
            +AG LLL  +
Sbjct: 1377 VAGGLLLAAY 1386


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1    IAGSLLLLGF 10
            +AG LLL  +
Sbjct: 1377 VAGGLLLAAY 1386


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 3    GSLLLLG 9
            G+L+LLG
Sbjct: 1011 GNLILLG 1017




7|Sequence|31|40|LLLGFLSTTT

>sp|US16_HCMVA|UNCHARACTERIZED protein HVLF2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   LLLGFLSTT 9
           LLLGF ST 
Sbjct: 214 LLLGFYSTV 222


>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain

Query: 1  LLLGFLST 8
          LLLGF  T
Sbjct: 54 LLLGFFET 61


>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains

Query: 1  LLLGFLST 8
          LLLGF  T
Sbjct: 54 LLLGFFET 61


>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2   LLGFLST 8
           +LGFL+T
Sbjct: 510 VLGFLAT 516


>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P

Query: 4   GFLSTTT 10
           GFL T+T
Sbjct: 173 GFLKTST 179


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1    LLLGFLS 7
            +LLGF+S
Sbjct: 3471 MLLGFVS 3477


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1    LLLGFLS 7
            +LLGF+S
Sbjct: 3471 MLLGFVS 3477


>sp|US16_HCMVM|PROTEIN US16|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   LLLGFLST 8
           LLLGF ST
Sbjct: 214 LLLGFYST 221


>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   LLGFLSTTT 10
           +LGFL+  T
Sbjct: 322 ILGFLAQNT 330




8|Sequence|36|45|LSTTTAQPEQ

>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 1    LSTTTAQPEQ 10
            LSTT   P Q
Sbjct: 2008 LSTTRKMPHQ 2017


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 1    LSTTTAQPEQ 10
            LSTT   P Q
Sbjct: 2008 LSTTRKMPHQ 2017




9|Sequence|41|50|AQPEQKASNL

>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1    AQPEQKAS 8
            A+PE+K S
Sbjct: 2397 AKPEEKLS 2404


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1    AQPEQKAS 8
            A+PE+K S
Sbjct: 2397 AKPEEKLS 2404




10|Sequence|46|55|KASNLIGTYR

>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)

Query: 1   KASNLIGTYR 10
           + SN++ T+R
Sbjct: 305 RHSNILNTFR 314


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1    KASNLIGT 8
            KAS +IGT
Sbjct: 1282 KASMIIGT 1289




11|Sequence|51|60|IGTYRHVDRA

>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain

Query: 2    GTYRHVDR 9
            G YRH+ R
Sbjct: 1036 GKYRHMQR 1043


>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21

Query: 3   TYRHVDRA 10
           TYR++D A
Sbjct: 435 TYRYIDSA 442


>sp|VE6_HPV43|PROTEIN E6|Human papillomavirus 43

Query: 1  IGTYRHVDRA 10
          I  YRH D A
Sbjct: 74 ISQYRHFDYA 83


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 1    IGTYRHVDRA 10
            +GTY H  R+
Sbjct: 1044 LGTYEHKSRS 1053


>sp|VE6_HPV6B|PROTEIN E6|Human papillomavirus type 6b

Query: 1  IGTYRHVDRA 10
          I  YRH D A
Sbjct: 74 INQYRHFDYA 83


>sp|VE6_HPV6A|PROTEIN E6|Human papillomavirus type 6a

Query: 1  IGTYRHVDRA 10
          I  YRH D A
Sbjct: 74 INQYRHFDYA 83


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 2   GTYRHVDRA 10
           GTY  +DRA
Sbjct: 469 GTYSTLDRA 477


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 2   GTYRHVDRA 10
           GTY  +DRA
Sbjct: 470 GTYSTLDRA 478


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 2   GTYRHVDRA 10
           GTY  +DRA
Sbjct: 469 GTYSTLDRA 477


>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)

Query: 1  IGTYRHVDRA 10
          I  YR V+RA
Sbjct: 80 ITVYRRVERA 89


>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate

Query: 4   YRHVD 8
           YRHVD
Sbjct: 330 YRHVD 334


>sp|PG160_VARV|DNA packaging protein OPG160|Variola virus

Query: 3   TYRHV 7
           TYRHV
Sbjct: 142 TYRHV 146


>sp|PG160_VAR67|DNA packaging protein OPG160|Variola virus (isolate

Query: 3   TYRHV 7
           TYRHV
Sbjct: 142 TYRHV 146


>sp|PG160_VACCC|DNA packaging protein OPG160|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   TYRHV 7
           TYRHV
Sbjct: 142 TYRHV 146


>sp|PG160_MONPV|DNA packaging protein OPG160|Monkeypox virus (MPXV)

Query: 3   TYRHV 7
           TYRHV
Sbjct: 172 TYRHV 176


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 2    GTYRHV 7
            GTYR+V
Sbjct: 1502 GTYRYV 1507


>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)

Query: 4   YRHVD 8
           YRH+D
Sbjct: 316 YRHID 320


>sp|PG049_VACCC|PROTEIN OPG049|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4   YRHVD 8
           YRH+D
Sbjct: 316 YRHID 320


>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25

Query: 3   TYRHVD 8
           TYR++D
Sbjct: 434 TYRYID 439


>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19

Query: 3   TYRHVD 8
           TYR++D
Sbjct: 463 TYRYID 468


>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8

Query: 3   TYRHVD 8
           TYR++D
Sbjct: 432 TYRYID 437


>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36

Query: 3   TYRHVD 8
           TYR++D
Sbjct: 433 TYRYID 438


>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   IGTYRH 6
           +G YRH
Sbjct: 480 VGAYRH 485


>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   IGTYRH 6
           +G YRH
Sbjct: 480 VGAYRH 485


>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b

Query: 3   TYRHVD 8
           TYR++D
Sbjct: 442 TYRYID 447


>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5

Query: 3   TYRHVD 8
           TYR++D
Sbjct: 433 TYRYID 438


>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   IGTYRH 6
           +GTY H
Sbjct: 281 LGTYHH 286


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 1  IGTYRHVDR 9
          +GTY  +DR
Sbjct: 47 LGTYYVLDR 55


>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)

Query: 1  IGTYRHVDR 9
          +GTY  +DR
Sbjct: 46 LGTYYILDR 54


>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   IGTYRH 6
           +GTY H
Sbjct: 281 LGTYHH 286


>sp|CRMB_CWPXG|SOLUBLE TNF receptor II|Cowpox virus (strain GRI-90 /

Query: 1   IGTYRH 6
           +GTY H
Sbjct: 157 LGTYSH 162


>sp|PG189_VARV|ANKYRIN repeat protein OPG189|Variola virus

Query: 1  IGTYRHVDR 9
          I TY+ VD+
Sbjct: 39 IRTYKKVDK 47


>sp|PG189_VAR67|ANKYRIN repeat protein OPG189|Variola virus (isolate

Query: 1  IGTYRHVDR 9
          I TY+ VD+
Sbjct: 39 IRTYKKVDK 47




12|Sequence|56|65|HVDRATGQVL

>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 2   VDRATGQVL 10
           +DR TGQ L
Sbjct: 597 IDRVTGQGL 605


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 2   VDRATGQVL 10
           +DR TGQ L
Sbjct: 597 IDRVTGQGL 605


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 2   VDRATGQVL 10
           +DR TGQ L
Sbjct: 597 IDRVTGQGL 605


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 2   VDRATGQVL 10
           +DR TGQ L
Sbjct: 597 IDRVTGQGL 605


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 2   VDRATGQVL 10
           +DR TGQ L
Sbjct: 597 IDRVTGQGL 605


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 2   VDRATGQVL 10
           +DR TGQ L
Sbjct: 597 IDRVTGQGL 605


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 2   VDRATGQVL 10
           +DR TGQ L
Sbjct: 597 IDRVTGQGL 605


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 2   VDRATGQVL 10
           +DR TGQ L
Sbjct: 597 IDRVTGQGL 605


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired

Query: 2   VDRATGQVL 10
           +DR TGQ L
Sbjct: 598 IDRVTGQGL 606


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 2   VDRATGQVL 10
           +DR TGQ L
Sbjct: 597 IDRVTGQGL 605


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate

Query: 2   VDRATGQVL 10
           +DR TGQ L
Sbjct: 597 IDRVTGQGL 605


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 2   VDRATGQVL 10
           +DR TGQ L
Sbjct: 598 IDRVTGQGL 606


>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus

Query: 3   DRATGQVL 10
           D +TGQVL
Sbjct: 101 DNSTGQVL 108


>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)

Query: 1    HVDRATG 7
            H+DR TG
Sbjct: 1066 HLDRVTG 1072


>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin

Query: 1    HVDRATG 7
            H+DR TG
Sbjct: 1065 HLDRVTG 1071


>sp|GP_PUUMU|ENVELOPE glycoprotein|Puumala virus (strain Udmurtia/894CG/91)

Query: 1   HVDRATG 7
           H+DR TG
Sbjct: 159 HLDRVTG 165


>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1    HVDRATG 7
            H+DR TG
Sbjct: 1071 HLDRVTG 1077


>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)

Query: 1    HVDRATG 7
            H+DR TG
Sbjct: 1071 HLDRVTG 1077


>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)

Query: 1    HVDRATG 7
            H+DR TG
Sbjct: 1071 HLDRVTG 1077


>sp|GP_PUUMB|ENVELOPE glycoprotein|Puumala virus (strain Berkel)

Query: 1   HVDRATG 7
           H+DR TG
Sbjct: 256 HLDRVTG 262


>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)

Query: 1    HVDRATG 7
            H+DR TG
Sbjct: 1065 HLDRVTG 1071


>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)

Query: 3  DRATGQVL 10
          DR TG++L
Sbjct: 10 DRVTGRIL 17


>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)

Query: 3  DRATGQVL 10
          DR TG++L
Sbjct: 8  DRVTGRIL 15


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 2  VDRATGQVL 10
          V+R  GQVL
Sbjct: 53 VERPIGQVL 61


>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13

Query: 2  VDRATGQ 8
          V+R TGQ
Sbjct: 24 VERTTGQ 30


>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18

Query: 2  VDRATGQVL 10
          VD+ TG V+
Sbjct: 24 VDKKTGDVI 32


>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   HVDRATGQ 8
           HV+ ATG+
Sbjct: 342 HVEGATGE 349


>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   HVDRATGQ 8
           HV+ ATG+
Sbjct: 342 HVEGATGE 349


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 2   VDRATGQVL 10
           VDR  G+VL
Sbjct: 595 VDRYDGRVL 603


>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7

Query: 2  VDRATGQVL 10
          VD+ TG V+
Sbjct: 24 VDKQTGDVV 32


>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)

Query: 1    HVDRATG 7
            H++R TG
Sbjct: 1067 HLERVTG 1073


>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)

Query: 1    HVDRATG 7
            H++R TG
Sbjct: 1064 HLERVTG 1070


>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka

Query: 2   VDRATGQVL 10
           VDR TG+ +
Sbjct: 186 VDRITGRAI 194


>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)

Query: 2   VDRATGQVL 10
           VDR TG+ +
Sbjct: 186 VDRITGRAI 194


>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29

Query: 2  VDRATGQVL 10
          VDR TG  +
Sbjct: 30 VDRRTGDTI 38




13|Sequence|61|70|TGQVLTCDKC

>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)

Query: 3   QVLTCDKC 10
            VLTC KC
Sbjct: 651 SVLTCKKC 658


>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)

Query: 3   QVLTCDKC 10
            VLTC KC
Sbjct: 651 SVLTCKKC 658


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2   GQVLTCDK 9
           GQ++TC K
Sbjct: 662 GQIVTCAK 669


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2   GQVLTCDK 9
           GQ++TC K
Sbjct: 662 GQIVTCAK 669


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 1    TGQVLTCDK 9
            T Q+L C++
Sbjct: 1560 TSQILVCNE 1568


Query: 5    LTCDKC 10
            +TC KC
Sbjct: 1287 VTCRKC 1292


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 2    GQVLTCDKC 10
            G+ L CD C
Sbjct: 6159 GRELNCDVC 6167


>sp|E434_ADE12|EARLY E4 34 kDa protein|Human adenovirus A serotype 12

Query: 4   VLTCDKC 10
           VL CD C
Sbjct: 211 VLCCDYC 217


>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27

Query: 3   QVLTC 7
           QVLTC
Sbjct: 259 QVLTC 263


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)

Query: 5    LTCDKC 10
            L C+KC
Sbjct: 1316 LRCNKC 1321


>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United

Query: 2   GQVLTC 7
           G+V+TC
Sbjct: 204 GRVMTC 209


>sp|NSS_UUKS|NON-STRUCTURAL protein NS-S|Uukuniemi virus (strain S23) (UUKV)

Query: 1   TGQVLTCDKC 10
           TGQ L  D C
Sbjct: 170 TGQNLVKDLC 179


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1    TGQVLTC 7
            +GQ +TC
Sbjct: 3984 SGQAITC 3990


>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P

Query: 2    GQVLTCD 8
            GQ+ TC+
Sbjct: 1172 GQLATCE 1178


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1    TGQVLTC 7
            +GQ +TC
Sbjct: 3984 SGQAITC 3990




14|Sequence|66|75|TCDKCPAGTY

>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2

Query: 2   CDKCPA 7
           CD CPA
Sbjct: 468 CDACPA 473


>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1

Query: 1   TCDKCPA 7
           TC+ CPA
Sbjct: 465 TCNACPA 471


>sp|NS7A_SARS|ORF7A protein|Severe acute respiratory syndrome coronavirus

Query: 3  DKCPAGTY 10
          + CP+GTY
Sbjct: 33 EPCPSGTY 40


>sp|UL144_HCMVM|MEMBRANE glycoprotein UL144|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  TCDKCPAGTY 10
          TC  CP GTY
Sbjct: 55 TCTPCPNGTY 64


>sp|A53_VACCC|TRUNCATED secreted TNF-receptor-like protein A53|Vaccinia virus (strain

Query: 2  CDKCPAGTY 10
          C++CP  TY
Sbjct: 72 CERCPPHTY 80


Query: 2  CDKCPAGTY 10
          C++CP G +
Sbjct: 51 CNRCPPGEF 59


>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)

Query: 2  CDKCPAGTY 10
          C  CP GTY
Sbjct: 44 CLSCPPGTY 52


>sp|UL144_HCMVO|MEMBRANE glycoprotein UL144|Human cytomegalovirus (strain Toledo) (HHV-5)

Query: 1  TCDKCPAGTY 10
          TC  CP GTY
Sbjct: 55 TCTPCPNGTY 64


>sp|CRMB_VARV|CYTOKINE response-modifying protein B|Variola virus

Query: 2  CDKCPAGTY 10
          C  CP GTY
Sbjct: 44 CLSCPPGTY 52


>sp|CRMB_VAR67|CYTOKINE response-modifying protein B|Variola virus (isolate

Query: 2  CDKCPAGTY 10
          C  CP GTY
Sbjct: 44 CLSCPPGTY 52


>sp|CRMB_CWPXG|SOLUBLE TNF receptor II|Cowpox virus (strain GRI-90 /

Query: 2  CDKCPAGTY 10
          C  CP GTY
Sbjct: 44 CLSCPPGTY 52


>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)

Query: 1   TCDKCPAGTY 10
           +CD+C A  +
Sbjct: 223 SCDQCRASLF 232


>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   TCDKCPAGTY 10
           +CD+C A  +
Sbjct: 223 SCDQCRASLF 232


>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1209 SCDKC 1213


>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1207 SCDKC 1211


>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1208 SCDKC 1212


>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1187 SCDKC 1191


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1196 SCDKC 1200


>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1196 SCDKC 1200


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1186 SCDKC 1190


>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1181 SCDKC 1185


>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1187 SCDKC 1191


>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1184 SCDKC 1188


>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1183 SCDKC 1187


>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1183 SCDKC 1187


>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1187 SCDKC 1191


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1185 SCDKC 1189


>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1183 SCDKC 1187


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1186 SCDKC 1190


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1192 SCDKC 1196


>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1191 SCDKC 1195


>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1185 SCDKC 1189


>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1186 SCDKC 1190


>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1190 SCDKC 1194


>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1186 SCDKC 1190


>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1186 SCDKC 1190


>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1198 SCDKC 1202


>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1198 SCDKC 1202


>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1198 SCDKC 1202


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1188 SCDKC 1192


>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1186 SCDKC 1190


>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1181 SCDKC 1185


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1181 SCDKC 1185


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1181 SCDKC 1185


>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1182 SCDKC 1186


>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    TCDKC 5
            +CDKC
Sbjct: 1186 SCDKC 1190


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 2    CDKCPAG 8
            C++C AG
Sbjct: 1181 CEQCAAG 1187


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 2    CDKCPAG 8
            C++C AG
Sbjct: 1181 CEQCAAG 1187


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    TCDKCPA 7
            TC +CPA
Sbjct: 5741 TCRRCPA 5747


Query: 1    TCDKCPAGTY 10
            TCD   AG Y
Sbjct: 5412 TCDWTNAGDY 5421


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    TCDKCPA 7
            TC +CPA
Sbjct: 5764 TCRRCPA 5770


Query: 1    TCDKCPAGTY 10
            TCD   AG Y
Sbjct: 5435 TCDWTNAGDY 5444


>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    CDKC 5
            CDKC
Sbjct: 1182 CDKC 1185


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    CDKC 5
            CDKC
Sbjct: 1191 CDKC 1194


>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)

Query: 5   CPAGT 9
           CPAGT
Sbjct: 495 CPAGT 499


>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   CDKCP 6
           CD CP
Sbjct: 282 CDTCP 286


>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)

Query: 5   CPAGT 9
           CPAGT
Sbjct: 495 CPAGT 499


>sp|PG181_VACCA|PROTEIN OPG181|Vaccinia virus (strain Ankara) (VACV)

Query: 3  DKCPAGTY 10
          DK P G Y
Sbjct: 88 DKTPTGVY 95


>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   CDKCP 6
           CD CP
Sbjct: 282 CDTCP 286


>sp|PG181_VACCC|PROTEIN OPG181|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3  DKCPAGTY 10
          DK P G Y
Sbjct: 92 DKTPTGVY 99


>sp|PG181_VARV|PROTEIN OPG181|Variola virus

Query: 3  DKCPAGTY 10
          DK P G Y
Sbjct: 92 DKTPTGVY 99


>sp|PG181_VAR67|PROTEIN OPG181|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3  DKCPAGTY 10
          DK P G Y
Sbjct: 92 DKTPTGVY 99


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 5   CPAGT 9
           CPAGT
Sbjct: 513 CPAGT 517


>sp|PG181_MONPV|PROTEIN OPG181|Monkeypox virus (MPXV)

Query: 3  DKCPAGTY 10
          DK P G Y
Sbjct: 92 DKTPTGVY 99


>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)

Query: 4   KCPAGT 9
           +CPAGT
Sbjct: 276 ECPAGT 281


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 1   TCDKCP 6
           TC  CP
Sbjct: 662 TCGPCP 667


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 1   TCDKCP 6
           TC  CP
Sbjct: 662 TCGPCP 667


>sp|V_PI4HB|NON-STRUCTURAL protein V|Human parainfluenza 4b virus (strain

Query: 1   TCDKCP 6
           TC +CP
Sbjct: 214 TCGRCP 219


>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain

Query: 4   KCPAGTY 10
           KC  G+Y
Sbjct: 378 KCAGGSY 384


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 2    CDKCP 6
            CD CP
Sbjct: 6164 CDVCP 6168


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1    TCDKCP 6
            TC +CP
Sbjct: 5736 TCYRCP 5741


>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese

Query: 2   CDKCP 6
           C KCP
Sbjct: 463 CVKCP 467


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 2    CDKCPA 7
            CD+C A
Sbjct: 1425 CDQCVA 1430


>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 2    CDKCPA 7
            CD+C A
Sbjct: 1413 CDQCVA 1418


>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 2    CDKCPA 7
            CD+C A
Sbjct: 1421 CDQCVA 1426


>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain

Query: 4   KCPAGTY 10
           KC  G+Y
Sbjct: 378 KCTGGSY 384


>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United

Query: 4   KCPAGTY 10
           KC  G+Y
Sbjct: 378 KCTGGSY 384


>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 4   KCPAGTY 10
           KC  G+Y
Sbjct: 378 KCTGGSY 384


>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4   KCPAGTY 10
           KC  G+Y
Sbjct: 378 KCTGGSY 384


>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 4   KCPAGTY 10
           KC  G+Y
Sbjct: 378 KCTGGSY 384


>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain

Query: 4   KCPAGTY 10
           KC  G+Y
Sbjct: 378 KCTGGSY 384


>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain

Query: 4   KCPAGTY 10
           KC  G+Y
Sbjct: 378 KCTGGSY 384


>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 4   KCPAGTY 10
           KC  G+Y
Sbjct: 378 KCTGGSY 384


>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain

Query: 4   KCPAGTY 10
           KC  G+Y
Sbjct: 378 KCTGGSY 384


>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 4   KCPAGTY 10
           KC  G+Y
Sbjct: 378 KCTGGSY 384


>sp|V_PI4HA|NON-STRUCTURAL protein V|Human parainfluenza 4a virus (strain

Query: 1   TCDKCP 6
           TC +CP
Sbjct: 214 TCGRCP 219


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 5   CPAGT 9
           CP GT
Sbjct: 770 CPTGT 774


Query: 2  CDKCPAGTY 10
          C KC A  Y
Sbjct: 19 CPKCSALQY 27


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 2  CDKCPAGTY 10
          C KC A  Y
Sbjct: 19 CPKCSALQY 27


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 2  CDKCPAGTY 10
          C KC A  Y
Sbjct: 19 CPKCSALQY 27


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 2  CDKCPAGTY 10
          C KC A  Y
Sbjct: 19 CPKCSALQY 27


>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70

Query: 2   CDKCPAG 8
           CDKC  G
Sbjct: 432 CDKCDDG 438


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 2  CDKCPAGTY 10
          C KC A  Y
Sbjct: 19 CPKCSALQY 27


>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain

Query: 5   CPAGT 9
           CP GT
Sbjct: 175 CPTGT 179


>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain AD169)

Query: 5   CPAGT 9
           CP GT
Sbjct: 175 CPTGT 179




15|Sequence|71|80|PAGTYVSEHC

>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 4    TYVSEHC 10
            TY+S HC
Sbjct: 1129 TYISVHC 1135


>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 4    TYVSEHC 10
            TY+S HC
Sbjct: 1129 TYISVHC 1135


>sp|CRMB_VARV|CYTOKINE response-modifying protein B|Variola virus

Query: 1  PAGTYVSEHC 10
          P GTY S  C
Sbjct: 48 PPGTYASRLC 57


>sp|CRMB_VAR67|CYTOKINE response-modifying protein B|Variola virus (isolate

Query: 1  PAGTYVSEHC 10
          P GTY S  C
Sbjct: 48 PPGTYASRLC 57


>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)

Query: 1  PAGTYVSEHC 10
          P GTY S  C
Sbjct: 48 PPGTYASRLC 57


>sp|CRMB_CWPXG|SOLUBLE TNF receptor II|Cowpox virus (strain GRI-90 /

Query: 1  PAGTYVSEHC 10
          P GTY S  C
Sbjct: 48 PPGTYASRLC 57


>sp|UL144_HCMVO|MEMBRANE glycoprotein UL144|Human cytomegalovirus (strain Toledo) (HHV-5)

Query: 1  PAGTYVS 7
          P GTYVS
Sbjct: 60 PNGTYVS 66


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 5    YVSEHC 10
            YVS HC
Sbjct: 1130 YVSVHC 1135


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 5    YVSEHC 10
            YVS HC
Sbjct: 1130 YVSVHC 1135


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 5    YVSEHC 10
            YVS HC
Sbjct: 1130 YVSVHC 1135


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 5    YVSEHC 10
            YVS HC
Sbjct: 1130 YVSVHC 1135


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 5    YVSEHC 10
            YVS HC
Sbjct: 1130 YVSVHC 1135


>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)

Query: 5   YVSEHC 10
           YV++HC
Sbjct: 210 YVAKHC 215


>sp|DPOL_VARV|DNA polymerase|Variola virus

Query: 1   PAGTYVSEHC 10
           P   Y++ HC
Sbjct: 591 PPPRYITVHC 600


>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   PAGTYVSEHC 10
           P   Y++ HC
Sbjct: 591 PPPRYITVHC 600


>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   PAGTYVSEHC 10
           P   Y++ HC
Sbjct: 592 PPPRYITVHC 601


>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)

Query: 1   PAGTYVSEHC 10
           P   Y++ HC
Sbjct: 592 PPPRYITVHC 601


>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)

Query: 1   PAGTYVSEHC 10
           P   Y++ HC
Sbjct: 592 PPPRYITVHC 601


>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   PAGTYVS 7
           PA TY S
Sbjct: 532 PASTYTS 538


>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   PAGTYVS 7
           PA TY S
Sbjct: 532 PASTYTS 538


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2    AGTYVS 7
            +GTYVS
Sbjct: 1633 SGTYVS 1638


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2    AGTYVS 7
            +GTYVS
Sbjct: 1632 SGTYVS 1637


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2    AGTYVS 7
            +GTYVS
Sbjct: 1633 SGTYVS 1638


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 2   AGTYVSEH 9
           A TY SEH
Sbjct: 177 AFTYTSEH 184


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 2   AGTYVSEH 9
           A TY SEH
Sbjct: 177 AFTYTSEH 184


>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)

Query: 2   AGTYVSEH 9
           A TY SEH
Sbjct: 177 AFTYTSEH 184


>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   PAGTYVSEHC 10
           PA +   +HC
Sbjct: 409 PAASRSKQHC 418


>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)

Query: 1  PAGTYVSEHC 10
          P G+ V+++C
Sbjct: 40 PGGSPVAQYC 49


>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   PAGTYVSEHC 10
           PA +   +HC
Sbjct: 409 PAASRSKQHC 418


>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)

Query: 1  PAGTYVSEHC 10
          P G+ V+++C
Sbjct: 40 PGGSPVAQYC 49


>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port

Query: 1   PAGTYVSE 8
           P GT +SE
Sbjct: 289 PIGTCISE 296


>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972

Query: 1   PAGTYVSE 8
           P GT +SE
Sbjct: 289 PIGTCISE 296


>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972

Query: 1   PAGTYVSE 8
           P GT +SE
Sbjct: 289 PIGTCISE 296


>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972

Query: 1   PAGTYVSE 8
           P GT +SE
Sbjct: 289 PIGTCISE 296


>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   PAGTYVSEHC 10
           PA +   +HC
Sbjct: 409 PAASRSKQHC 418


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 4   TYVSEHC 10
           +Y+SE C
Sbjct: 407 SYLSERC 413




16|Sequence|76|85|VSEHCTNTSL

>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 1    VSEHCTN 7
            V+EHC N
Sbjct: 1076 VTEHCGN 1082


>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3

Query: 2   SEHCTNT 8
           SEHC N+
Sbjct: 286 SEHCNNS 292


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 1    VSEHC 5
            VSEHC
Sbjct: 1080 VSEHC 1084


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1    VSEHCTN 7
            V EHC N
Sbjct: 1062 VDEHCGN 1068


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1    VSEHCTN 7
            V EHC N
Sbjct: 1061 VDEHCGN 1067


>sp|ORF3_MERS1|NON-STRUCTURAL protein ORF3|Middle East respiratory syndrome-related coronavirus

Query: 1  VSEHCTNTS 9
          V EHC N S
Sbjct: 28 VPEHCQNYS 36


>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   EHCTN 7
           EHC N
Sbjct: 100 EHCQN 104


>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   EHCTN 7
           EHC N
Sbjct: 101 EHCQN 105


>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   EHCTN 7
           EHC N
Sbjct: 101 EHCQN 105


>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)

Query: 2  SEHCTNTSL 10
          +EHC N  +
Sbjct: 42 NEHCNNVEV 50


>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)

Query: 2  SEHCTNTSL 10
          +EHC N  +
Sbjct: 42 NEHCNNVEV 50




17|Sequence|81|90|TNTSLRVCSS

>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)

Query: 1   TNTSLR 6
           TNTSLR
Sbjct: 602 TNTSLR 607


>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   TNTSLR 6
           TNTSLR
Sbjct: 602 TNTSLR 607


>sp|MATRX_RABVD|MATRIX protein|Rabies virus (strain China/DRV) (RABV)

Query: 2   NTSLRVC 8
           NTS R C
Sbjct: 172 NTSSRAC 178


>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)

Query: 1   TNTSLR 6
           TNTSLR
Sbjct: 628 TNTSLR 633




18|Sequence|86|95|RVCSSCPVGT

>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese

Query: 1   RVCSSCP 7
           RVC  CP
Sbjct: 461 RVCVKCP 467


>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)

Query: 1   RVCSSCP 7
           RVC  CP
Sbjct: 480 RVCVRCP 486


>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)

Query: 4   SSCPVGT 10
           +SCP+GT
Sbjct: 493 ASCPIGT 499


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 2    VCSSCPV 8
            +CSS PV
Sbjct: 3304 ICSSVPV 3310


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 3   CSSCP 7
           CS+CP
Sbjct: 543 CSACP 547


>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   VCSSCP 7
           VC +CP
Sbjct: 429 VCGTCP 434


>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 156 RALMSCPVG 164


>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   VCSSCP 7
           VC +CP
Sbjct: 429 VCGTCP 434


>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 156 RALMSCPVG 164


>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 156 RALMSCPVG 164


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 4    SSCPVG 9
            S CP+G
Sbjct: 1008 SQCPIG 1013


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 4    SSCPVG 9
            S CP+G
Sbjct: 1005 SQCPIG 1010


>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 156 RALMSCPVG 164


>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 156 RALMSCPVG 164


>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 156 RTLMSCPVG 164


>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 156 RTLMSCPVG 164


>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 141 RTLMSCPVG 149


>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 141 RALMSCPVG 149


>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 156 RTLMSCPVG 164


>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 136 RTLMSCPVG 144


>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 156 RALMSCPVG 164


>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 136 RTLMSCPVG 144


>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 136 RTLMSCPVG 144


>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 156 RTLMSCPVG 164


>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 156 RTLMSCPVG 164


>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 156 RTLMSCPVG 164


>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 156 RTLMSCPVG 164


>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 140 RALMSCPVG 148


>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 136 RTLMSCPVG 144


>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 137 RTLMSCPVG 145


>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 136 RTLMSCPVG 144


>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 136 RTLMSCPVG 144


>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 136 RTLMSCPVG 144


>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 136 RTLMSCPVG 144


>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 136 RTLMSCPVG 144


>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 137 RTLMSCPVG 145


>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005

Query: 1   RVCSSCPVG 9
           R   SCPVG
Sbjct: 128 RTLMSCPVG 136


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 2    VCSSCP 7
            VC  CP
Sbjct: 1078 VCKRCP 1083


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2    VCSSCPVGT 10
            VC S P G+
Sbjct: 2035 VCGSMPSGS 2043


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2    VCSSCPVGT 10
            VC S P G+
Sbjct: 2034 VCGSMPSGS 2042


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2    VCSSCPVGT 10
            VC S P G+
Sbjct: 2034 VCGSMPSGS 2042


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2    VCSSCPVGT 10
            VC S P G+
Sbjct: 2034 VCGSMPSGS 2042


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2    VCSSCPVGT 10
            VC S P G+
Sbjct: 1868 VCGSMPSGS 1876


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2    VCSSCPVGT 10
            VC S P G+
Sbjct: 2034 VCGSMPSGS 2042


>sp|NSP5_ROTHC|NON-STRUCTURAL protein 5|Rotavirus C (isolate RVC/Human/United

Query: 2   VCSSCP 7
           +C +CP
Sbjct: 184 ICKNCP 189


>sp|VLTF3_VARV|VIRAL late gene transcription factor|Variola virus

Query: 1 RVCSSC 6
         R+CS C
Sbjct: 4 RLCSGC 9


>sp|VLTF3_VAR67|VIRAL late gene transcription factor|Variola virus (isolate

Query: 1 RVCSSC 6
         R+CS C
Sbjct: 4 RLCSGC 9


>sp|VLTF3_VACCC|VIRAL late gene transcription factor|Vaccinia virus (strain

Query: 1 RVCSSC 6
         R+CS C
Sbjct: 4 RLCSGC 9


>sp|VLTF3_VACCA|VIRAL late gene transcription factor|Vaccinia virus (strain Ankara)

Query: 1 RVCSSC 6
         R+CS C
Sbjct: 4 RLCSGC 9


>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979

Query: 1   RVCSSCPVG 9
           R   SCP+G
Sbjct: 156 RALMSCPIG 164


>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954

Query: 1   RVCSSCPVG 9
           R   SCP+G
Sbjct: 156 RALMSCPIG 164


>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New

Query: 1   RVCSSCPVG 9
           R   SCP+G
Sbjct: 156 RTLMSCPIG 164


>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New

Query: 1   RVCSSCPVG 9
           R   SCP+G
Sbjct: 156 RTLMSCPIG 164


>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961

Query: 1   RVCSSCPVG 9
           R   SCP+G
Sbjct: 156 RTLMSCPIG 164


>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3   CSSCPV 8
           CSSCP+
Sbjct: 341 CSSCPL 346


>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)

Query: 3   CSSCP 7
           C++CP
Sbjct: 423 CATCP 427


>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983

Query: 1   RVCSSCPVG 9
           R   SCP+G
Sbjct: 156 RALMSCPIG 164


>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980

Query: 1   RVCSSCPVG 9
           R   SCP+G
Sbjct: 156 RALMSCPIG 164


>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977

Query: 1   RVCSSCPVG 9
           R   SCP+G
Sbjct: 156 RALMSCPIG 164


>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978

Query: 1   RVCSSCPVG 9
           R   SCP+G
Sbjct: 156 RALMSCPIG 164


>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951

Query: 1   RVCSSCPVG 9
           R   SCP+G
Sbjct: 156 RALMSCPIG 164


>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967

Query: 1   RVCSSCPVG 9
           R   SCP+G
Sbjct: 156 RTLMSCPIG 164


>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954

Query: 1   RVCSSCPVG 9
           R   SCP+G
Sbjct: 156 RALMSCPIG 164


>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959

Query: 1   RVCSSCPVG 9
           R   SCP+G
Sbjct: 156 RTLMSCPIG 164


>sp|VLTF3_MONPV|VIRAL late gene transcription factor|Monkeypox virus (MPXV)

Query: 1 RVCSSC 6
         R+CS C
Sbjct: 4 RLCSCC 9


>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)

Query: 3   CSSCP 7
           C++CP
Sbjct: 423 CATCP 427


>sp|KITH_VACCA|THYMIDINE kinase|Vaccinia virus (strain Ankara) (VACV)

Query: 2   VCSSCPVGT 10
           VC  C VG+
Sbjct: 169 VCRKCYVGS 177


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 2    VCSSCPV 8
            +CS+ PV
Sbjct: 3308 ICSAVPV 3314


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 2    VCSSCPV 8
            +CS+ PV
Sbjct: 3312 ICSAVPV 3318


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 6   CPVGT 10
           CP GT
Sbjct: 770 CPTGT 774


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related

Query: 2   VCSSCP 7
           +C++CP
Sbjct: 382 LCATCP 387


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 2    VCSSCPV 8
            +CS+ PV
Sbjct: 3312 ICSAVPV 3318


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 2   VCSSCP 7
           +C++CP
Sbjct: 382 LCATCP 387


>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006

Query: 1   RVCSSCPVG 9
           R   SCP+G
Sbjct: 156 RALMSCPLG 164


>sp|CRMB_VARV|CYTOKINE response-modifying protein B|Variola virus

Query: 3  CSSCPVGT 10
          C SCP GT
Sbjct: 44 CLSCPPGT 51


>sp|CRMB_VAR67|CYTOKINE response-modifying protein B|Variola virus (isolate

Query: 3  CSSCPVGT 10
          C SCP GT
Sbjct: 44 CLSCPPGT 51


>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007

Query: 1   RVCSSCPVG 9
           R   SCP+G
Sbjct: 156 RALMSCPLG 164


>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New

Query: 1   RVCSSCPVG 9
           R   SCP+G
Sbjct: 156 RALMSCPLG 164


>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)

Query: 3  CSSCPVGT 10
          C SCP GT
Sbjct: 44 CLSCPPGT 51


>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996

Query: 1   RVCSSCPVG 9
           R   SCP+G
Sbjct: 156 RALMSCPLG 164


>sp|CRMB_CWPXG|SOLUBLE TNF receptor II|Cowpox virus (strain GRI-90 /

Query: 3  CSSCPVGT 10
          C SCP GT
Sbjct: 44 CLSCPPGT 51


Query: 2   VCSSCPVGT 10
           VCS C +GT
Sbjct: 151 VCSPCGLGT 159


>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996

Query: 1   RVCSSCPVG 9
           R   SCP+G
Sbjct: 156 RALMSCPLG 164


>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain AD169)

Query: 4   SSCPVGT 10
           + CP GT
Sbjct: 173 APCPTGT 179


>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain

Query: 4   SSCPVGT 10
           + CP GT
Sbjct: 173 APCPTGT 179


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 1    RVCSSCP 7
            ++C  CP
Sbjct: 1399 QLCKDCP 1405


>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   VCSSCPVG 9
           +C++ P+G
Sbjct: 147 LCATAPIG 154


>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 1   RVCSSCPVG 9
           ++ S+CP G
Sbjct: 288 KMLSNCPPG 296


>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 1   RVCSSCPVG 9
           ++ S+CP G
Sbjct: 288 KMLSNCPPG 296


>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 1   RVCSSCPVG 9
           ++ S+CP G
Sbjct: 288 KMLSNCPPG 296


>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 1   RVCSSCPVG 9
           ++ S+CP G
Sbjct: 288 KMLSNCPPG 296


>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   RVCSSC 6
           R C SC
Sbjct: 820 RACESC 825


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 1    RVCSSCP 7
            ++C  CP
Sbjct: 1391 QLCKDCP 1397


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 5   SCPVGT 10
           +CP GT
Sbjct: 512 TCPAGT 517


>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   RVCSSC 6
           R C SC
Sbjct: 820 RACESC 825


>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   RVCSSC 6
           R C SC
Sbjct: 820 RACESC 825


>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)

Query: 6   CPVGT 10
           CP GT
Sbjct: 770 CPTGT 774




19|Sequence|91|100|CPVGTFTRHE

>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)

Query: 1   CPVGTFTRH 9
           CP GT  RH
Sbjct: 495 CPAGTKYRH 503


>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)

Query: 1   CPVGTFTRH 9
           CP GT  RH
Sbjct: 495 CPAGTKYRH 503


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1    CPVGTF 6
            CP+G+F
Sbjct: 1641 CPIGSF 1646


>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   PVGTFTR 8
           P+G+FTR
Sbjct: 399 PLGSFTR 405


>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   PVGTFTR 8
           P+G+FTR
Sbjct: 399 PLGSFTR 405


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 1   CPVGTFTRH 9
           CP  ++T+H
Sbjct: 359 CPTSSWTQH 367


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1   CPVGTFTRH 9
           CP   F RH
Sbjct: 581 CPTDCFRRH 589


>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7

Query: 1   CPVGTFTRH 9
           C    FTRH
Sbjct: 467 CNYAVFTRH 475


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 2    PVGTFT 7
            P GTFT
Sbjct: 3372 PTGTFT 3377


>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /

Query: 2  PVGTFTRH 9
          P+G +++H
Sbjct: 81 PLGAYSKH 88


>sp|VC17_VACCC|ANKYRIN repeat protein C17/B23|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   PVGTFTRH 9
           P+G +++H
Sbjct: 99  PLGAYSKH 106


>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4   GTFTRH 9
           GTF RH
Sbjct: 354 GTFDRH 359


>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4   GTFTRH 9
           GTF RH
Sbjct: 360 GTFDRH 365


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2    PVGTFT 7
            P GTFT
Sbjct: 3372 PTGTFT 3377


>sp|CEP2_HHV2H|CYTOPLASMIC envelopment protein 2|Human herpesvirus 2 (strain HG52)

Query: 1   CPVGTFTRH 9
           CP G+  RH
Sbjct: 219 CPPGSRARH 227


>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)

Query: 1   CPVGTFTRH 9
           CP G+  RH
Sbjct: 221 CPPGSRARH 229


>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain

Query: 2   PVGTFTRH 9
           P GT+T++
Sbjct: 148 PYGTYTQY 155


>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain

Query: 4   GTFTRH 9
           GT+T+H
Sbjct: 150 GTYTQH 155


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 2   PVGTFTRHE 10
           P G  T H+
Sbjct: 468 PAGVLTNHD 476


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 2   PVGTFT 7
           P+G FT
Sbjct: 666 PIGAFT 671


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 2   PVGTFT 7
           P+G FT
Sbjct: 664 PIGAFT 669


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 2   PVGTFT 7
           P+G FT
Sbjct: 666 PIGAFT 671


>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   VGTFTRH 9
           VGTFT +
Sbjct: 453 VGTFTEN 459


>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P

Query: 3  VGTFTRH 9
          +GT TRH
Sbjct: 7  LGTITRH 13




20|Sequence|96|105|FTRHENGIEK

>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human

Query: 1   FTRHENG 7
           FT HENG
Sbjct: 599 FTLHENG 605


>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human

Query: 1   FTRHENG 7
           FT HENG
Sbjct: 599 FTLHENG 605


>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)

Query: 1    FTRHENGIEK 10
            + RH  GIEK
Sbjct: 1107 WVRHHVGIEK 1116


>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63

Query: 1   FTRHENGIE 9
           FT++++GIE
Sbjct: 120 FTQNDSGIE 128


>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human

Query: 1   FTRHENG 7
           +T HENG
Sbjct: 599 YTLHENG 605


>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1    FTRHENGIEK 10
            + RH  GIEK
Sbjct: 1107 WIRHHVGIEK 1116


>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)

Query: 1    FTRHENGIEK 10
            + RH  GIEK
Sbjct: 1107 WIRHHVGIEK 1116


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 5   ENGIEK 10
           ENG+EK
Sbjct: 880 ENGVEK 885


Query: 4    HENGIE 9
            H NG+E
Sbjct: 1621 HHNGLE 1626


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 5   ENGIEK 10
           ENG+EK
Sbjct: 880 ENGVEK 885


Query: 4    HENGIE 9
            H NG+E
Sbjct: 1621 HHNGLE 1626


>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 5   ENGIEK 10
           ENG+EK
Sbjct: 884 ENGVEK 889


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 5   ENGIEK 10
           ENG+EK
Sbjct: 886 ENGVEK 891


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 5   ENGIEK 10
           ENG+EK
Sbjct: 886 ENGVEK 891


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 5   ENGIEK 10
           ENG+EK
Sbjct: 886 ENGVEK 891


>sp|UL79_HCMVM|PROTEIN UL79|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   TRHENGI 8
           +RHE GI
Sbjct: 222 SRHETGI 228


>sp|NEC1_HHV8P|NUCLEAR egress protein 1|Human herpesvirus 8 type P

Query: 2  TRHENGIEK 10
          ++H NG+ K
Sbjct: 45 SKHRNGLRK 53


>sp|UL79_HCMVA|PROTEIN UL79|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   TRHENGI 8
           +RHE GI
Sbjct: 222 SRHETGI 228


>sp|PRO_ADE41|PROTEASE adenovirus F serotype 41

Query: 1   FTRHENGIEK 10
           F RH   IEK
Sbjct: 185 FRRHRERIEK 194


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 3    RHENGIEK 10
            RHEN   K
Sbjct: 1395 RHENATRK 1402


Query: 4  HENGI 8
          HENG+
Sbjct: 13 HENGV 17


>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22

Query: 1   FTRHENGIE 9
           F  H++G+E
Sbjct: 115 FVEHDSGLE 123


>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus

Query: 1   FTRHENG 7
           F  HENG
Sbjct: 599 FILHENG 605


>sp|PRO_ADE12|PROTEASE adenovirus A serotype 12

Query: 1   FTRHENGIE 9
           FT+ +NG++
Sbjct: 198 FTKMQNGLK 206


>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New

Query: 3   RHENGIEK 10
           RH NG  K
Sbjct: 143 RHSNGTVK 150


>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New

Query: 3   RHENGIEK 10
           RH NG  K
Sbjct: 143 RHSNGTVK 150


>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961

Query: 3   RHENGIEK 10
           RH NG  K
Sbjct: 143 RHSNGTVK 150


>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936

Query: 3   RHENGIEK 10
           RH NG  K
Sbjct: 143 RHSNGTVK 150


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4    HENGI 8
            HENG+
Sbjct: 1865 HENGL 1869


>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)

Query: 4   HENGI 8
           HENG+
Sbjct: 148 HENGL 152




21|Sequence|101|110|NGIEKCHDCS

>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)

Query: 5    KCHDC 9
            KCH+C
Sbjct: 1329 KCHNC 1333


>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)

Query: 5    KCHDC 9
            KCH+C
Sbjct: 1329 KCHNC 1333


>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)

Query: 5    KCHDC 9
            KCH+C
Sbjct: 1334 KCHNC 1338


>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)

Query: 2   GIEKCHDC 9
           G  +CH+C
Sbjct: 489 GALQCHEC 496


>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)

Query: 2   GIEKCHDC 9
           G  +CH+C
Sbjct: 489 GALQCHEC 496


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 4    EKCHDC 9
            E C DC
Sbjct: 1391 ETCKDC 1396


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 2  GIEKCHDCS 10
          G E C  CS
Sbjct: 74 GAEPCWKCS 82


>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   NGIEKCHDCS 10
           NG   CH+ S
Sbjct: 234 NGTGLCHNIS 243


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 4    EKCHDCS 10
            E+C +CS
Sbjct: 1149 EQCVECS 1155


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 4    EKCHDCS 10
            E+C +CS
Sbjct: 1149 EQCVECS 1155


>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)

Query: 5   KCHDCS 10
           +C DC+
Sbjct: 459 RCQDCN 464


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 1   NGIEKC 6
           NG +KC
Sbjct: 812 NGFQKC 817


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 2    GIEKCHDCS 10
            G ++C  CS
Sbjct: 1183 GSDECEHCS 1191


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 2    GIEKCHDCS 10
            G ++C  CS
Sbjct: 1183 GSDECEHCS 1191


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 2    GIEKCHDCS 10
            G ++C  CS
Sbjct: 1183 GSDECEHCS 1191


>sp|Y145_ADE07|UNCHARACTERIZED 14.5 kDa early protein|Human adenovirus B serotype 7

Query: 1   NGIEKCHD 8
           +GI + HD
Sbjct: 109 HGISRAHD 116




22|Sequence|106|115|CHDCSQPCPW

>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain

Query: 2  HDCSQPCPW 10
          HD   PCPW
Sbjct: 79 HDMVWPCPW 87


>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)

Query: 2  HDCSQPCPW 10
          HD   PCPW
Sbjct: 79 HDMVWPCPW 87


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 1    CHDCSQP------CP 9
            C DC QP      CP
Sbjct: 1401 CKDCPQPANFKKCCP 1415


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 1    CHDCSQP------CP 9
            C DC QP      CP
Sbjct: 1393 CKDCHQPANFKRCCP 1407


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 1    CHDCSQP 7
            C DC QP
Sbjct: 1368 CKDCHQP 1374


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 1    CHDCSQP 7
            C DC QP
Sbjct: 1369 CKDCHQP 1375


>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60

Query: 1   CHDCSQPCPW 10
           C DC+Q   W
Sbjct: 390 CDDCNQEGNW 399


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 3    DCSQPC 8
            DCS PC
Sbjct: 1967 DCSTPC 1972


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 6    QPCPW 10
            QP PW
Sbjct: 1900 QPLPW 1904


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1    CHDCSQPC 8
            C+DCS  C
Sbjct: 4563 CNDCSVLC 4570


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1   CHDCSQPCP 9
           C DCS   P
Sbjct: 862 CADCSSTPP 870


>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus

Query: 2   HDCSQPCP 9
           H+C+  CP
Sbjct: 156 HECNISCP 163


>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 2   HDCSQPCP 9
           H+C+  CP
Sbjct: 156 HECNISCP 163


>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 2   HDCSQPCP 9
           ++CS P P
Sbjct: 251 YECSNPAP 258


>sp|PG067_VARV|PROTEIN OPG067|Variola virus

Query: 2   HDCSQPC 8
           HD  +PC
Sbjct: 295 HDIVEPC 301


>sp|PG067_VAR67|PROTEIN OPG067|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2   HDCSQPC 8
           HD  +PC
Sbjct: 295 HDIVEPC 301


>sp|PG067_VACCD|PROTEIN OPG067|Vaccinia virus (strain Dairen I)

Query: 2   HDCSQPC 8
           HD  +PC
Sbjct: 295 HDIVEPC 301


>sp|PG067_VACCC|PROTEIN OPG067|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   HDCSQPC 8
           HD  +PC
Sbjct: 295 HDIVEPC 301


>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P

Query: 3   DCSQPC 8
           DC +PC
Sbjct: 132 DCDKPC 137


>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCMRPCFW 423


>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)

Query: 5   SQPCPW 10
           S+PC W
Sbjct: 128 SEPCYW 133


>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCMRPCFW 423


>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCMRPCFW 423


>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCMRPCFW 423


>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCMRPCFW 423


>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCMRPCFW 423


>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCMRPCFW 423


>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 401 DCMRPCFW 408


>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCMRPCFW 423


>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCMRPCFW 423


>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCMRPCFW 423


>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCMRPCFW 423


>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCMRPCFW 423


>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCIRPCLW 423


>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCMRPCFW 423


>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCMRPCFW 423


>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 400 DCMRPCFW 407


>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCMRPCFW 423


>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCMRPCFW 423


>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCMRPCFW 423


>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)

Query: 2   HDCSQPC 8
           H C+Q C
Sbjct: 503 HKCNQTC 509


>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)

Query: 2   HDCSQPC 8
           H C+Q C
Sbjct: 502 HKCNQTC 508


>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)

Query: 2   HDCSQPC 8
           H C+Q C
Sbjct: 502 HKCNQTC 508


>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)

Query: 2   HDCSQPC 8
           H C+Q C
Sbjct: 502 HKCNQTC 508


>sp|RP30_VAR67|DNA-DIRECTED RNA polymerase 30 kDa|Variola virus (isolate Human/India/Ind3/1967)

Query: 1   CHDCSQ 6
           C DC Q
Sbjct: 187 CRDCKQ 192


>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)

Query: 2   HDCSQPC 8
           H C+Q C
Sbjct: 504 HKCNQTC 510


>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)

Query: 2   HDCSQPC 8
           H C+Q C
Sbjct: 504 HKCNQTC 510


>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)

Query: 2   HDCSQPC 8
           H C+Q C
Sbjct: 493 HKCNQTC 499


>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   HDCSQPCPW 10
           H C+   PW
Sbjct: 609 HICTTTVPW 617


>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   DCSQPCP 9
           DC +P P
Sbjct: 362 DCVRPVP 368


>sp|RP30_VACCC|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   CHDCSQ 6
           C DC Q
Sbjct: 187 CRDCKQ 192


>sp|RP30_MONPV|DNA-DIRECTED RNA polymerase 30 kDa|Monkeypox virus (MPXV)

Query: 1   CHDCSQ 6
           C DC Q
Sbjct: 187 CRDCKQ 192


>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCIRPCFW 423


>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)

Query: 2   HDCSQPC 8
           H C+Q C
Sbjct: 497 HKCNQTC 503


>sp|RP30_VACCA|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1   CHDCSQ 6
           C DC Q
Sbjct: 187 CRDCKQ 192


>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCIRPCFW 423


>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)

Query: 2   HDCSQPC 8
           H C+Q C
Sbjct: 497 HKCNQTC 503


>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)

Query: 2   HDCSQPC 8
           H C+Q C
Sbjct: 495 HKCNQTC 501


>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong

Query: 2   HDCSQPC 8
           H C+Q C
Sbjct: 494 HKCNQTC 500


>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)

Query: 2   HDCSQPC 8
           H C+Q C
Sbjct: 494 HKCNQTC 500


>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCIRPCFW 423


>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCIRPCFW 423


>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCIRPCFW 423


>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCIRPCFW 423


>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 401 DCIRPCFW 408


>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 396 DCIRPCFW 403


>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCIRPCFW 423


>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCIRPCFW 423


>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCIRPCFW 423


>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCIRPCFW 423


>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 396 DCIRPCFW 403


>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 416 DCIRPCFW 423


>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 396 DCIRPCFW 403


>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 396 DCIRPCFW 403


>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 396 DCIRPCFW 403


>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 396 DCIRPCFW 403


>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 396 DCIRPCFW 403


>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 396 DCIRPCFW 403


>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005

Query: 3   DCSQPCPW 10
           DC +PC W
Sbjct: 388 DCIRPCFW 395


>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   CHDCSQ 6
           CH C Q
Sbjct: 480 CHTCYQ 485


>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   CHDCSQ 6
           CH C Q
Sbjct: 480 CHTCYQ 485


>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)

Query: 5   SQPCP 9
           S PCP
Sbjct: 577 SDPCP 581


>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   HDCSQPCPW 10
           H C+   PW
Sbjct: 592 HICTTNVPW 600


>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   HDCSQPCPW 10
           H C+   PW
Sbjct: 599 HICTTNVPW 607


>sp|RL13_HCMVM|MEMBRANE protein RL13|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  CHDCSQPCP 9
          C++ + PCP
Sbjct: 19 CYNQTCPCP 27


>sp|VE6_HPV61|PROTEIN E6|Human papillomavirus type 61

Query: 1   CHDCSQP 7
           CH CS+P
Sbjct: 100 CHACSKP 106


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 4   CSQPCPW 10
           CS   PW
Sbjct: 504 CSMVAPW 510


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    HDCSQPC 8
             DCS PC
Sbjct: 1966 EDCSTPC 1972


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    HDCSQPC 8
             DCS PC
Sbjct: 1966 EDCSTPC 1972


>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P

Query: 1  CHDCSQPCP 9
          C D  +P P
Sbjct: 7  CTDMDEPSP 15


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    HDCSQPC 8
             DCS PC
Sbjct: 1966 EDCSTPC 1972


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    HDCSQPC 8
             DCS PC
Sbjct: 1966 EDCSTPC 1972


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    HDCSQPC 8
             DCS PC
Sbjct: 1966 EDCSTPC 1972


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    HDCSQPC 8
             DCS PC
Sbjct: 1966 EDCSTPC 1972


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    HDCSQPC 8
             DCS PC
Sbjct: 1966 EDCSTPC 1972


>sp|NSP1_ROT41|NON-STRUCTURAL protein 1|Rotavirus A (isolate

Query: 1  CHDCS--QPCPW 10
          CH CS    C W
Sbjct: 54 CHGCSLAHVCQW 65


>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2

Query: 5   SQPCPW 10
           SQP PW
Sbjct: 264 SQPFPW 269


>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)

Query: 3   DCSQP 7
           DCS+P
Sbjct: 711 DCSRP 715


>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)

Query: 3   DCSQP 7
           DCS+P
Sbjct: 711 DCSRP 715


>sp|VE6_HPV08|PROTEIN E6|Human papillomavirus type 8

Query: 2  HDCSQPCPW 10
           DCS PC +
Sbjct: 33 QDCSVPCNF 41


>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)

Query: 3   DCSQP 7
           DCS+P
Sbjct: 711 DCSRP 715


>sp|REV_HV1MV|PROTEIN Rev|Human immunodeficiency virus type 1

Query: 5  SQPCP 9
          S PCP
Sbjct: 24 SNPCP 28


>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   HDCSQPCPW 10
           H C+   PW
Sbjct: 604 HICTTFVPW 612


>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain

Query: 4   CSQPCP 9
           C Q CP
Sbjct: 528 CEQSCP 533


>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain

Query: 4   CSQPCP 9
           C Q CP
Sbjct: 528 CEQSCP 533


>sp|PRO_ADE04|PROTEASE adenovirus E serotype 4

Query: 4   CSQPCPW 10
           CS  C W
Sbjct: 127 CSTACAW 133


>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)

Query: 3   DCSQP 7
           DCS+P
Sbjct: 706 DCSRP 710




23|Sequence|111|120|QPCPWPMIEK

>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)

Query: 1   QPCPWPMIE 9
           +PCP P IE
Sbjct: 769 KPCPEPKIE 777


>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 1   QPCPWPMIE 9
           +PCP P IE
Sbjct: 769 KPCPEPKIE 777


>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain

Query: 2  PCPW 5
          PCPW
Sbjct: 84 PCPW 87


>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)

Query: 2  PCPW 5
          PCPW
Sbjct: 84 PCPW 87


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 1    QPCPWPMI 8
            QP PW  +
Sbjct: 1900 QPLPWSFV 1907


>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate

Query: 1   QPCPWP 6
           +PCP P
Sbjct: 456 EPCPLP 461


>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)

Query: 2   PCPWP 6
           P PWP
Sbjct: 204 PLPWP 208


>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate

Query: 1   QPCPWP 6
           +PCP P
Sbjct: 452 EPCPLP 457


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 3    CPWPMI 8
            C WP++
Sbjct: 4102 CNWPLV 4107


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 3    CPWPMI 8
            C WP++
Sbjct: 4102 CNWPLV 4107


>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)

Query: 1   QPCPWP 6
           +PCP P
Sbjct: 460 KPCPKP 465


>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)

Query: 1   QPCPWPMIE 9
           +PCP P  E
Sbjct: 768 KPCPEPEAE 776


>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn

Query: 1   QPCPWPM 7
           QP  WP+
Sbjct: 218 QPTSWPL 224


>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   PCPWP 6
           P PWP
Sbjct: 204 PLPWP 208


>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate

Query: 2   PCPWP 6
           PCP P
Sbjct: 448 PCPLP 452


>sp|E434_ADE12|EARLY E4 34 kDa protein|Human adenovirus A serotype 12

Query: 2  PCPWPMI 8
          P PW MI
Sbjct: 68 PIPWDMI 74


>sp|BMRF2_EBVB9|PROTEIN BMRF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3   CPWPMI 8
           CPW ++
Sbjct: 214 CPWDLL 219


>sp|BMRF2_EBVA8|PROTEIN BMRF2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3   CPWPMI 8
           CPW ++
Sbjct: 214 CPWDLL 219


>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)

Query: 1   QPCPWPMIE 9
           +PCP P  E
Sbjct: 768 KPCPEPEAE 776


>sp|VME1_CVHNL|MEMBRANE protein|Human coronavirus NL63 (HCoV-NL63)

Query: 3  CPWPMI 8
          C WP++
Sbjct: 54 CLWPLV 59


>sp|BMRF2_EBVG|PROTEIN BMRF2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3   CPWPMI 8
           CPW ++
Sbjct: 214 CPWDLM 219


>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)

Query: 1   QPCPW 5
           Q CPW
Sbjct: 377 QMCPW 381


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 4    PWPMIEK 10
            P+P++EK
Sbjct: 2144 PFPVLEK 2150


>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   PCPWPMI 8
           PC W M+
Sbjct: 875 PCGWMMV 881


>sp|E434_ADE09|EARLY E4 34 kDa protein|Human adenovirus D serotype 9

Query: 2  PCPWPMI 8
          P PW MI
Sbjct: 68 PVPWDMI 74


>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72

Query: 1   QPCPWPMI 8
           Q C W M+
Sbjct: 266 QTCQWGMV 273


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 2   PCPWPMIEK 10
           P P  MIEK
Sbjct: 688 PKPQKMIEK 696


>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61

Query: 1   QPCPWPMI 8
           Q C W M+
Sbjct: 266 QTCQWGMV 273


>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4

Query: 1   QPCPWP 6
           +PCP P
Sbjct: 174 EPCPSP 179


>sp|REX_HTL32|PROTEIN Rex|Human T-cell leukemia virus 3

Query: 1   QPCPWPMI 8
           QPCP P +
Sbjct: 149 QPCPSPTL 156


>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10

Query: 2   PCPWPM 7
           PC W M
Sbjct: 300 PCQWGM 305


>sp|VE4_HPV6A|PROTEIN E4|Human papillomavirus type 6a

Query: 2  PCPWPMIE 9
          PC WP ++
Sbjct: 55 PCVWPTLD 62


>sp|VE4_HPV18|PROTEIN E4|Human papillomavirus type 18

Query: 2  PCPW 5
          PCPW
Sbjct: 31 PCPW 34


>sp|RL13_HCMVM|MEMBRANE protein RL13|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  QPCPWPMI 8
          Q CP P I
Sbjct: 22 QTCPCPCI 29


>sp|VE4_HPV6C|PROBABLE protein E4|Human papillomavirus type 6c

Query: 2  PCPWPMIE 9
          PC WP ++
Sbjct: 72 PCVWPTLD 79


>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29

Query: 2   PCPWPM 7
           PC W M
Sbjct: 279 PCQWGM 284


>sp|UL91_HCMVA|PROTEIN UL91|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  QPCPWPM 7
          +PCP P+
Sbjct: 83 RPCPSPV 89


>sp|UL91_HCMVM|PROTEIN UL91|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  QPCPWPM 7
          +PCP P+
Sbjct: 83 RPCPSPV 89


>sp|VE4_HPV6B|PROTEIN E4|Human papillomavirus type 6b

Query: 2  PCPWPMIE 9
          PC WP ++
Sbjct: 55 PCVWPTLD 62


>sp|ORF2_TTVA1|UNCHARACTERIZED ORF2 protein|Torque teno virus 1 (isolate

Query: 4   PWPM 7
           PWPM
Sbjct: 161 PWPM 164




24|Sequence|116|125|PMIEKLPCAA

>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 2   MIEKLP 7
           MIEKLP
Sbjct: 693 MIEKLP 698


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 1    PMIEKLPCAA 10
            P++EK+P  A
Sbjct: 1438 PLLEKIPLLA 1447


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 1    PMIEKLPCAA 10
            P++EK+P  A
Sbjct: 1438 PLLEKIPLLA 1447


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 1    PMIEKLPCAA 10
            P++EK+P  A
Sbjct: 1438 PLLEKIPLLA 1447


>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain

Query: 1   PMIEKLPC 8
           PMI++L C
Sbjct: 958 PMIDQLEC 965


>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)

Query: 1   PMIEKLPC 8
           PMI++L C
Sbjct: 958 PMIDQLEC 965


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 2    MIEKLPC 8
            +++KLPC
Sbjct: 1082 VMQKLPC 1088


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 2    MIEKLPC 8
            +++KLPC
Sbjct: 1082 VMQKLPC 1088


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 1    PMIEKL 6
            PM+EKL
Sbjct: 1857 PMLEKL 1862


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 1    PMIEKL 6
            PM+EKL
Sbjct: 1848 PMLEKL 1853


>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus

Query: 1    PMIEKLPCAA 10
            PM +++ C A
Sbjct: 1077 PMTDQIECTA 1086


>sp|PG132_VACCC|VIRION morphogenesis protein OPG132|Vaccinia virus (strain Copenhagen)

Query: 1  PMIEKLPCA 9
          P++EK  CA
Sbjct: 44 PVLEKKVCA 52


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 3    IEKLPCA 9
            I +LPCA
Sbjct: 6498 IGELPCA 6504


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3   IEKLPCAA 10
           + K+PC A
Sbjct: 365 VVKMPCPA 372


>sp|NSP4_ROTGA|NON-STRUCTURAL glycoprotein 4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)

Query: 2   MIEKLPC 8
           +IEKL C
Sbjct: 104 VIEKLQC 110


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 3   IEKLPCAA 10
           + K+PC A
Sbjct: 365 VVKMPCPA 372




25|Sequence|121|130|LPCAALTDRE

>sp|PG176_MONPV|PROTEIN OPG176|Monkeypox virus (MPXV)

Query: 3   CAALTDRE 10
           C+A+TDRE
Sbjct: 230 CSAVTDRE 237


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 3    CAALTD 8
            CA LTD
Sbjct: 1637 CAVLTD 1642


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 3    CAALTD 8
            CA LTD
Sbjct: 1637 CAVLTD 1642


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 3    CAALTD 8
            CA LTD
Sbjct: 1637 CAVLTD 1642


>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   CAALTD 8
           CAAL+D
Sbjct: 949 CAALSD 954


>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   CAALTD 8
           CAAL+D
Sbjct: 949 CAALSD 954




26|Sequence|126|135|LTDRECTCPP

>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 4    RECTCPP 10
            RECT PP
Sbjct: 1108 RECTMPP 1114


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 4    RECTCPP 10
            RECT PP
Sbjct: 1108 RECTMPP 1114


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 4    RECTCPP 10
            RECT PP
Sbjct: 1104 RECTMPP 1110


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 4    RECTCPP 10
            R+CT PP
Sbjct: 1091 RKCTLPP 1097


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1102 RSCTAPP 1108


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1107 RSCTLPP 1113


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1077 RSCTLPP 1083


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1107 RSCTLPP 1113


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1101 RSCTLPP 1107


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1092 RSCTMPP 1098


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1092 RSCTMPP 1098


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1092 RSCTMPP 1098


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1092 RSCTMPP 1098


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1092 RSCTMPP 1098


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1092 RSCTMPP 1098


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1092 RSCTMPP 1098


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1092 RSCTMPP 1098


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1092 RSCTMPP 1098


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1085 RSCTMPP 1091


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1100 RSCTMPP 1106


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1089 RSCTLPP 1095


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1088 RSCTLPP 1094


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1089 RSCTLPP 1095


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1105 RSCTLPP 1111


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1089 RSCTLPP 1095


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1089 RSCTLPP 1095


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1089 RSCTLPP 1095


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1105 RSCTLPP 1111


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1087 RSCTLPP 1093


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1089 RSCTLPP 1095


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1089 RSCTLPP 1095


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1089 RSCTLPP 1095


>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1092 RSCTMPP 1098


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1087 RSCTLPP 1093


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1087 RSCTLPP 1093


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1087 RSCTLPP 1093


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1087 RSCTLPP 1093


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1089 RSCTLPP 1095


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1088 RSCTMPP 1094


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1088 RSCTMPP 1094


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1088 RSCTMPP 1094


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1088 RSCTMPP 1094


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1088 RSCTMPP 1094


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1091 RACTMPP 1097


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1091 RTCTLPP 1097


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1091 RACTMPP 1097


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1091 RACTMPP 1097


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 4    RECTCPP 10
            R CT PP
Sbjct: 1091 RACTMPP 1097


>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain

Query: 4   RECTCPP 10
           R CT PP
Sbjct: 809 RSCTLPP 815


>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P

Query: 1   LTDRECTCP 9
           L  REC CP
Sbjct: 611 LERRECVCP 619


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 2   TDRECTCPP 10
            DR C C P
Sbjct: 491 ADRHCACAP 499


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 2   TDRECTCPP 10
            DR C C P
Sbjct: 491 ADRHCACAP 499


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 2   TDRECTCPP 10
            DR C C P
Sbjct: 491 ADRHCACAP 499


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 2   TDRECTCPP 10
            DR C C P
Sbjct: 491 ADRHCACAP 499


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 2   TDRECTCPP 10
            DR C C P
Sbjct: 491 ADRHCACAP 499


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 2   TDRECTCPP 10
            DR C C P
Sbjct: 491 ADRHCACAP 499


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 2   TDRECTCPP 10
            DR C C P
Sbjct: 491 ADRHCACAP 499


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 2   TDRECTCPP 10
            DR C C P
Sbjct: 491 ADRHCACAP 499


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 4    RECTCPP 10
            R C+ PP
Sbjct: 1108 RSCSLPP 1114


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 4    RECTCPP 10
            R C+ PP
Sbjct: 1108 RSCSLPP 1114


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 4    RECTCPP 10
            R C+ PP
Sbjct: 1108 RSCSLPP 1114


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 4    RECTCPP 10
            R C+ PP
Sbjct: 1108 RSCSLPP 1114


>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)

Query: 4    RECTCPP 10
            R C+ PP
Sbjct: 1036 RSCSLPP 1042


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 3   DRECTCPP 10
           DR C C P
Sbjct: 492 DRHCACAP 499


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 4    RECTCPP 10
            R C+ PP
Sbjct: 1103 RSCSLPP 1109


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 4    RECTCPP 10
            R+C  PP
Sbjct: 1107 RDCILPP 1113


>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)

Query: 3  DRECTCPP 10
          DR+ +C P
Sbjct: 53 DRDISCSP 60


>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)

Query: 3  DRECTCPP 10
          DR+ +C P
Sbjct: 53 DRDISCSP 60


>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)

Query: 3  DRECTCPP 10
          DR+ +C P
Sbjct: 53 DRDISCSP 60


>sp|PG053_VARV|EFC-ASSOCIATED protein OPG053|Variola virus

Query: 5   ECTCPP 10
           EC+ PP
Sbjct: 126 ECSAPP 131


>sp|PG053_VAR67|EFC-ASSOCIATED protein OPG053|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 5   ECTCPP 10
           EC+ PP
Sbjct: 126 ECSAPP 131


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 4    RECTCPP 10
            + CT PP
Sbjct: 1101 KNCTLPP 1107


>sp|PG053_MONPV|EFC-ASSOCIATED protein OPG053|Monkeypox virus (MPXV)

Query: 5   ECTCPP 10
           EC+ PP
Sbjct: 126 ECSAPP 131


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 4    RECTCPP 10
            + CT PP
Sbjct: 1101 KNCTMPP 1107


>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 4    RECTCPP 10
            R C+ PP
Sbjct: 1108 RSCSLPP 1114


>sp|PG053_VACCP|EFC-ASSOCIATED protein OPG053|Vaccinia virus (strain L-IVP) (VACV)

Query: 5   ECTCPP 10
           EC+ PP
Sbjct: 126 ECSAPP 131


>sp|PG053_VACCC|EFC-ASSOCIATED protein OPG053|Vaccinia virus (strain Copenhagen) (VACV)

Query: 5   ECTCPP 10
           EC+ PP
Sbjct: 126 ECSAPP 131


>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 4    RECTCPP 10
            R C+ PP
Sbjct: 1108 RSCSLPP 1114


>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 4    RECTCPP 10
            R C+ PP
Sbjct: 1108 RSCSLPP 1114


>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)

Query: 4    RECTCPP 10
            R C+ PP
Sbjct: 1108 RSCSLPP 1114


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 1    LTDRECTCP 9
            +T+ EC CP
Sbjct: 1022 VTETECLCP 1030


>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006

Query: 3   DRECTCPP 10
           DRE +C P
Sbjct: 330 DREGSCNP 337


Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2    TDRECTCPP 10
            +D +C+ PP
Sbjct: 1713 SDSDCSIPP 1721


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2    TDRECTCPP 10
            +D +C+ PP
Sbjct: 1712 SDSDCSIPP 1720


>sp|US02_HHV11|PROTEIN US2|Human herpesvirus 1 (strain 17)

Query: 4  RECTCPP 10
          R C CPP
Sbjct: 77 RSCRCPP 83


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 1    LTDRECTCP 9
            ++DRE  CP
Sbjct: 1127 VSDREGQCP 1135


>sp|HBSAG_HBVA4|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 2   TDRECTCPP 10
           TD  CTC P
Sbjct: 317 TDGNCTCIP 325


>sp|US02_HHV2H|PROTEIN US2|Human herpesvirus 2 (strain HG52)

Query: 4  RECTCPP 10
          R C CPP
Sbjct: 77 RSCRCPP 83


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 1    LTDRECTCP 9
            ++DRE  CP
Sbjct: 1127 VSDREGQCP 1135


>sp|HBSAG_HBVA7|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 2   TDRECTCPP 10
           TD  CTC P
Sbjct: 317 TDGNCTCIP 325


>sp|HBSAG_HBVA1|LARGE envelope protein|Hepatitis B virus genotype A1

Query: 2   TDRECTCPP 10
           TD  CTC P
Sbjct: 317 TDGNCTCIP 325


>sp|HBSAG_HBVA3|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 2   TDRECTCPP 10
           TD  CTC P
Sbjct: 317 TDGNCTCIP 325


>sp|HBSAG_HBVA6|LARGE envelope protein|Hepatitis B virus genotype A1

Query: 2   TDRECTCPP 10
           TD  CTC P
Sbjct: 306 TDGNCTCIP 314


>sp|HBSAG_HBVB6|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 2   TDRECTCPP 10
           TD  CTC P
Sbjct: 317 TDGNCTCIP 325


>sp|HBSAG_HBVA5|LARGE envelope protein|Hepatitis B virus genotype A1

Query: 2   TDRECTCPP 10
           TD  CTC P
Sbjct: 317 TDGNCTCIP 325


>sp|HBSAG_HBVA2|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 2   TDRECTCPP 10
           TD  CTC P
Sbjct: 306 TDGNCTCIP 314


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1    LTDRECT 7
            LTD +CT
Sbjct: 3524 LTDLKCT 3530


>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|HBSAG_HBVB8|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 2   TDRECTCPP 10
           TD  CTC P
Sbjct: 317 TDGNCTCIP 325


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1    LTDREC 6
            +TD+EC
Sbjct: 6767 ITDQEC 6772


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1    LTDREC 6
            +TD+EC
Sbjct: 6787 ITDQEC 6792


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 4    RECTC 8
            R CTC
Sbjct: 2165 RNCTC 2169


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1    LTDRECT 7
            LTD +CT
Sbjct: 3549 LTDLKCT 3555


>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 263 ECSCYP 268


>sp|HBSAG_HBVB7|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 2   TDRECTCPP 10
           TD  CTC P
Sbjct: 317 TDGNCTCIP 325


>sp|HBSAG_HBVB5|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 2   TDRECTCPP 10
           TD  CTC P
Sbjct: 317 TDGNCTCIP 325


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1    LTDREC 6
            +TD+EC
Sbjct: 6817 ITDQEC 6822


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 4    RECTC 8
            R CTC
Sbjct: 2165 RNCTC 2169


>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse

Query: 4   RECTC 8
           R+CTC
Sbjct: 420 RQCTC 424


>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|HBSAG_HBVB4|LARGE envelope protein|Hepatitis B virus genotype B/C

Query: 2   TDRECTCPP 10
           TD  CTC P
Sbjct: 306 TDGNCTCIP 314


>sp|HBSAG_HBVA8|LARGE envelope protein|Hepatitis B virus genotype A3

Query: 2   TDRECTCPP 10
           TD  CTC P
Sbjct: 317 TDGNCTCIP 325


>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United

Query: 4   RECTC 8
           R+CTC
Sbjct: 420 RQCTC 424


>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 258 ECSCYP 263


>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1    LTDRECT 7
            LTD +CT
Sbjct: 3524 LTDLKCT 3530


>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 258 ECSCYP 263


>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 258 ECSCYP 263


>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 258 ECSCYP 263


>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    LTDRECTC 8
            L DR  TC
Sbjct: 6134 LCDRRATC 6141


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1    LTDRECT 7
            LTD +CT
Sbjct: 3549 LTDLKCT 3555


>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 258 ECSCYP 263


>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 258 ECSCYP 263


>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 258 ECSCYP 263


>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 258 ECSCYP 263


>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 6   CTCPP 10
           CTC P
Sbjct: 567 CTCRP 571


>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 4   RECTC 8
           R+CTC
Sbjct: 420 RQCTC 424


>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4   RECTCP 9
           RECT P
Sbjct: 505 RECTSP 510


>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4   RECTCP 9
           RECT P
Sbjct: 505 RECTSP 510


>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 258 ECSCYP 263


>sp|HBSAG_HBVB3|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 2   TDRECTCPP 10
           TD  CTC P
Sbjct: 317 TDGNCTCIP 325


>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|HBSAG_HBVB2|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 2   TDRECTCPP 10
           TD  CTC P
Sbjct: 306 TDGNCTCIP 314


>sp|HBSAG_HBVA9|LARGE envelope protein|Hepatitis B virus genotype A3

Query: 2   TDRECTCPP 10
           TD  CTC P
Sbjct: 317 TDGNCTCIP 325


>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 259 ECSCYP 264


>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 259 ECSCYP 264


>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 250 ECSCYP 255


>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 263 ECSCYP 268


>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 278 ECSCYP 283


>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933

Query: 5   ECTCPP 10
           EC+C P
Sbjct: 262 ECSCYP 267


>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong

Query: 5  ECTCPP 10
          EC+ PP
Sbjct: 41 ECSSPP 46


>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993

Query: 5  ECTCPP 10
          EC+ PP
Sbjct: 41 ECSSPP 46


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 6   CTCPP 10
           CT PP
Sbjct: 131 CTMPP 135


>sp|HBSAG_HBVC6|SMALL envelope protein|Hepatitis B virus genotype C

Query: 2   TDRECTCPP 10
           +D  CTC P
Sbjct: 143 SDGNCTCIP 151


>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979

Query: 5  ECTCPP 10
          EC+ PP
Sbjct: 41 ECSSPP 46


>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)

Query: 2    TDRECTCP 9
             DRE  CP
Sbjct: 1119 ADREGHCP 1126


>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980

Query: 5  ECTCPP 10
          EC+ PP
Sbjct: 41 ECSSPP 46


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1    LTDRECT 7
            LTD +CT
Sbjct: 3848 LTDLKCT 3854




27|Sequence|131|140|CTCPPGMFQS

>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 1    CTCPPGMFQS 10
            CT PP  FQ+
Sbjct: 1103 CTLPPLRFQT 1112


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3    CPPGM 7
            CPPGM
Sbjct: 4287 CPPGM 4291


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 1    CTCPPGMFQS 10
            CT PP  F++
Sbjct: 1093 CTLPPVTFRT 1102


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1    CTCPPGMFQS 10
            CT PP  F++
Sbjct: 1093 CTLPPVTFRT 1102


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 1    CTCPPGMFQS 10
            CT PP  F++
Sbjct: 1093 CTMPPVTFRT 1102


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 1    CTCPPGMFQS 10
            CT PP  F++
Sbjct: 1093 CTMPPVTFRT 1102


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 1    CTCPPGMFQS 10
            CT PP  F++
Sbjct: 1093 CTMPPVTFRT 1102


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 1    CTCPPGMFQS 10
            CT PP  F++
Sbjct: 1093 CTMPPVTFRT 1102


>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1

Query: 4   PPGMFQS 10
           PP +FQS
Sbjct: 208 PPALFQS 214


>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)

Query: 2  TCPPGMFQS 10
          +CPPG + S
Sbjct: 46 SCPPGTYAS 54


Query: 1   CTCPPGMF 8
           C C PG +
Sbjct: 108 CECSPGYY 115


>sp|CRMB_CWPXG|SOLUBLE TNF receptor II|Cowpox virus (strain GRI-90 /

Query: 2  TCPPGMFQS 10
          +CPPG + S
Sbjct: 46 SCPPGTYAS 54


Query: 1   CTCPPGMF 8
           C C PG +
Sbjct: 110 CECAPGYY 117


>sp|CRMB_VARV|CYTOKINE response-modifying protein B|Variola virus

Query: 2  TCPPGMFQS 10
          +CPPG + S
Sbjct: 46 SCPPGTYAS 54


Query: 1   CTCPPGMF 8
           C C PG +
Sbjct: 108 CECSPGYY 115


>sp|CRMB_VAR67|CYTOKINE response-modifying protein B|Variola virus (isolate

Query: 2  TCPPGMFQS 10
          +CPPG + S
Sbjct: 46 SCPPGTYAS 54


Query: 1   CTCPPGMF 8
           C C PG +
Sbjct: 108 CECSPGYY 115


>sp|YVEA_VACCC|UNCHARACTERIZED 7.6 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2  TCPPGMF 8
          TC PG+F
Sbjct: 8  TCFPGLF 14


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 3   CPPGMFQS 10
           CPPG+  S
Sbjct: 264 CPPGVAPS 271


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 3   CPPGMFQS 10
           CPPG+  S
Sbjct: 264 CPPGVAPS 271


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 3   CPPGMFQS 10
           CPPG+  S
Sbjct: 264 CPPGVAPS 271


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 1    CTCPPGMFQ 9
            CT PP  F 
Sbjct: 1094 CTMPPVSFH 1102


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 1    CTCPPGMFQ 9
            CT PP  F 
Sbjct: 1094 CTMPPVSFH 1102


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 1    CTCPPGMFQ 9
            CT PP  F 
Sbjct: 1094 CTMPPVSFH 1102


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1    CTCPPGMFQ 9
            CT PP  F 
Sbjct: 1094 CTMPPVSFH 1102


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1    CTCPPGMFQ 9
            CT PP  F 
Sbjct: 1094 CTMPPVSFH 1102


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 1    CTCPPGMFQ 9
            CT PP  F 
Sbjct: 1094 CTMPPVSFH 1102


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1    CTCPPGMFQ 9
            CT PP  F 
Sbjct: 1094 CTMPPVSFH 1102


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1    CTCPPGMFQ 9
            CT PP  F 
Sbjct: 1094 CTMPPVSFH 1102


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1    CTCPPGMFQ 9
            CT PP  F 
Sbjct: 1094 CTMPPVSFH 1102


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1    CTCPPGMFQS 10
            C  PP  F+S
Sbjct: 1093 CELPPVTFRS 1102


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 1    CTCPPGMFQS 10
            C  PP  F+S
Sbjct: 1095 CELPPVTFRS 1104


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 1    CTCPPGMFQS 10
            C  PP  F+S
Sbjct: 1095 CELPPVTFRS 1104


>sp|HEMA_I83A1|HEMAGGLUTININ A virus (strain A/Chile/1/1983

Query: 2   TCPPGMF 8
           TC PG F
Sbjct: 106 TCYPGYF 112


>sp|HEMA_I80AA|HEMAGGLUTININ A virus (strain A/India/6263/1980

Query: 2   TCPPGMF 8
           TC PG F
Sbjct: 106 TCYPGYF 112


>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977

Query: 2   TCPPGMF 8
           TC PG F
Sbjct: 106 TCYPGYF 112


>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978

Query: 2   TCPPGMF 8
           TC PG F
Sbjct: 106 TCYPGYF 112


>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954

Query: 2   TCPPGMF 8
           TC PG F
Sbjct: 106 TCYPGYF 112


>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996

Query: 2   TCPPGMF 8
           TC PG F
Sbjct: 106 TCYPGYF 112


>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979

Query: 2   TCPPGMF 8
           TC PG F
Sbjct: 106 TCYPGYF 112


>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996

Query: 2   TCPPGMF 8
           TC PG F
Sbjct: 106 TCYPGYF 112


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1    CTCPPGMF 8
            CT PP  F
Sbjct: 1087 CTMPPVSF 1094


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1    CTCPPGMFQS 10
            C  PP  F+S
Sbjct: 1109 CILPPLTFRS 1118


>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New

Query: 2   TCPPGMF 8
           TC PG F
Sbjct: 106 TCYPGYF 112


>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)

Query: 3   CPPGMF 8
           CPPG F
Sbjct: 438 CPPGEF 443


>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)

Query: 3   CPPGMF 8
           CPPG F
Sbjct: 438 CPPGEF 443


>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007

Query: 2   TCPPGMF 8
           TC PG F
Sbjct: 106 TCYPGYF 112


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    CTCPPGMF 8
            CTC  G+F
Sbjct: 3790 CTCYFGLF 3797


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1    CTCPPGMF 8
            CTC  G+F
Sbjct: 3790 CTCYFGLF 3797


>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006

Query: 2   TCPPGMF 8
           TC PG F
Sbjct: 106 TCYPGHF 112


>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980

Query: 2   TCPPGMF 8
           TC PG F
Sbjct: 106 TCYPGEF 112


>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23

Query: 2  TCPP 5
          TCPP
Sbjct: 24 TCPP 27


>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985

Query: 2   TCPPGMF 8
           TC PG F
Sbjct: 106 TCYPGEF 112


>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976

Query: 2   TCPPGMF 8
           TC PG F
Sbjct: 106 TCYPGEF 112


>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981

Query: 2   TCPPGMF 8
           TC PG F
Sbjct: 106 TCYPGEF 112


>sp|VL2_HPV15|MINOR capsid protein L2|Human papillomavirus 15

Query: 2  TCPP 5
          TCPP
Sbjct: 24 TCPP 27


>sp|A53_VACCC|TRUNCATED secreted TNF-receptor-like protein A53|Vaccinia virus (strain

Query: 3  CPPGMF 8
          CPPG F
Sbjct: 54 CPPGEF 59


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1    CTCPP 5
            CT PP
Sbjct: 1079 CTLPP 1083


>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 5   PGMFQS 10
           PG+FQ+
Sbjct: 100 PGLFQA 105


>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 5   PGMFQS 10
           PG+FQ+
Sbjct: 100 PGLFQA 105


>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 5   PGMFQS 10
           PG+FQ+
Sbjct: 100 PGLFQA 105


>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 5   PGMFQS 10
           PG+FQ+
Sbjct: 100 PGLFQA 105


>sp|HEMA_I86A0|HEMAGGLUTININ A virus (strain A/Taiwan/1/1986

Query: 2   TCPPGMF 8
           TC PG F
Sbjct: 106 TCYPGYF 112


>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human

Query: 2  TCPP 5
          TCPP
Sbjct: 23 TCPP 26


>sp|VL2_HPV22|MINOR capsid protein L2|Human papillomavirus 22

Query: 2  TCPP 5
          TCPP
Sbjct: 24 TCPP 27


>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2    TCPP 5
            TCPP
Sbjct: 1205 TCPP 1208


>sp|VL2_HPV09|MINOR capsid protein L2|Human papillomavirus 9

Query: 2  TCPP 5
          TCPP
Sbjct: 24 TCPP 27


>sp|VL2_HPV37|MINOR capsid protein L2|Human papillomavirus 37

Query: 2  TCPP 5
          TCPP
Sbjct: 24 TCPP 27


>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   CPPG 6
           CPPG
Sbjct: 381 CPPG 384


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1    CTCPPGMF 8
            CTC  G+F
Sbjct: 3776 CTCYFGVF 3783


>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins

Query: 3   CPPG 6
           CPPG
Sbjct: 271 CPPG 274


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1    CTCPPGMF 8
            CTC  G+F
Sbjct: 3776 CTCYFGVF 3783


>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24

Query: 2  TCPP 5
          TCPP
Sbjct: 24 TCPP 27


>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36

Query: 2  TCPP 5
          TCPP
Sbjct: 24 TCPP 27


>sp|VL2_HPV17|MINOR capsid protein L2|Human papillomavirus 17

Query: 2  TCPP 5
          TCPP
Sbjct: 24 TCPP 27


>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b

Query: 2  TCPP 5
          TCPP
Sbjct: 24 TCPP 27


>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12

Query: 2  TCPP 5
          TCPP
Sbjct: 24 TCPP 27


>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5

Query: 2  TCPP 5
          TCPP
Sbjct: 24 TCPP 27


>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   CTCPPG 6
           C CP G
Sbjct: 173 CDCPGG 178


>sp|VL2_HPV38|MINOR capsid protein L2|Human papillomavirus 38

Query: 2  TCPP 5
          TCPP
Sbjct: 24 TCPP 27


>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 1   CTCPP 5
           C CPP
Sbjct: 473 CLCPP 477


>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   CTCPPG 6
           C CP G
Sbjct: 173 CDCPGG 178


>sp|TAX_HTLV2|PROTEIN Tax-2|Human T-cell leukemia virus 2

Query: 3   CPPGMFQS 10
            PP  FQS
Sbjct: 101 VPPAFFQS 108


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 1   CTCPP 5
           CT PP
Sbjct: 131 CTMPP 135


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 2    TCPPGMF 8
            TCP G F
Sbjct: 1028 TCPRGGF 1034


>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8

Query: 2  TCPP 5
          TCPP
Sbjct: 24 TCPP 27


>sp|HEMA_I82A2|HEMAGGLUTININ A virus (strain A/Camel/Mongolia/1982

Query: 2  TCPPGMF 8
          TC PG F
Sbjct: 86 TCYPGYF 92


>sp|VL2_HPV25|MINOR capsid protein L2|Human papillomavirus 25

Query: 2  TCPP 5
          TCPP
Sbjct: 24 TCPP 27


>sp|VL2_HPV19|MINOR capsid protein L2|Human papillomavirus 19

Query: 2  TCPP 5
          TCPP
Sbjct: 24 TCPP 27


>sp|VL2_HPV14|MINOR capsid protein L2|Human papillomavirus 14

Query: 2  TCPP 5
          TCPP
Sbjct: 24 TCPP 27


>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21

Query: 2  TCPP 5
          TCPP
Sbjct: 24 TCPP 27


>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20

Query: 2  TCPP 5
          TCPP
Sbjct: 24 TCPP 27


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 4    PPGMFQS 10
            P GMF S
Sbjct: 1512 PSGMFDS 1518


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4    PPGMFQS 10
            P GMF S
Sbjct: 1508 PSGMFDS 1514


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4    PPGMFQS 10
            P GMF S
Sbjct: 1508 PSGMFDS 1514




28|Sequence|136|145|GMFQSNATCA

>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23

Query: 3   FQSNATC 9
           F+SN TC
Sbjct: 187 FKSNKTC 193


>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24

Query: 3   FQSNATC 9
           F+SN TC
Sbjct: 187 FRSNKTC 193


>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 1   GMFQSNA 7
           G+FQSNA
Sbjct: 787 GVFQSNA 793


>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1   GMFQSNATC 9
           GM + N TC
Sbjct: 371 GMLRFNVTC 379


>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22

Query: 3   FQSNATC 9
           F+SN TC
Sbjct: 188 FRSNKTC 194


>sp|E311_ADE03|EARLY E3 9.0 kDa glycoprotein|Human adenovirus B serotype 3

Query: 2  MFQSNATCA 10
          +FQSN T +
Sbjct: 3  LFQSNTTTS 11


>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38

Query: 3   FQSNATC 9
           ++SN TC
Sbjct: 184 YKSNKTC 190


>sp|E311_ADE07|EARLY E3 7.7 kDa protein|Human adenovirus B serotype 7

Query: 2 MFQSNAT 8
         +FQSN T
Sbjct: 3 LFQSNTT 9


>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human

Query: 3   FQSNATC 9
           ++SN TC
Sbjct: 188 YKSNKTC 194


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1    GMFQSNATC 9
            G+F S A C
Sbjct: 4854 GVFMSTAKC 4862


>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1

Query: 2   MFQSNATCA 10
           + Q+N +CA
Sbjct: 423 VLQTNVSCA 431


>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30

Query: 3   FQSNATC 9
           F+S++TC
Sbjct: 208 FKSDSTC 214


>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9

Query: 3   FQSNATC 9
           ++SN TC
Sbjct: 185 YKSNKTC 191


>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66

Query: 3   FQSNATC 9
           F+S++TC
Sbjct: 207 FKSDSTC 213




29|Sequence|141|150|NATCAPHTVC

>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)

Query: 2   ATCAPH 7
           ATCAPH
Sbjct: 331 ATCAPH 336


>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 2   ATCAPH 7
           +TCAPH
Sbjct: 331 STCAPH 336


>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)

Query: 2   ATCAPH 7
           +TCAPH
Sbjct: 331 STCAPH 336


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1    NATCAPHTV 9
            NAT APH +
Sbjct: 1656 NATTAPHII 1664


>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)

Query: 3   TCAPH 7
           TCAPH
Sbjct: 332 TCAPH 336


>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)

Query: 2   ATCAPH 7
           A CAPH
Sbjct: 331 AACAPH 336


>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)

Query: 2   ATCAPH 7
           A CAPH
Sbjct: 331 AACAPH 336


>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)

Query: 2   ATCAPH 7
           A CAPH
Sbjct: 331 AACAPH 336


>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins

Query: 2   ATCAPH 7
           A CAPH
Sbjct: 331 AACAPH 336


>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)

Query: 2   ATCAPH 7
           A CAPH
Sbjct: 331 AACAPH 336


>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 2   ATCAPH 7
           A CAPH
Sbjct: 331 AACAPH 336


>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)

Query: 2   ATCAPH 7
           A CAPH
Sbjct: 331 AACAPH 336


>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)

Query: 2   ATCAPH 7
           A CAPH
Sbjct: 331 AACAPH 336


>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)

Query: 2   ATCAPH 7
           A CAPH
Sbjct: 331 AACAPH 336


>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)

Query: 2   ATCAPH 7
           A CAPH
Sbjct: 331 AACAPH 336


>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 2   ATCAPH 7
           A CAPH
Sbjct: 331 AACAPH 336


>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)

Query: 2   ATCAPH 7
           A CAPH
Sbjct: 331 AGCAPH 336


>sp|PG140_VARV|VIRION membrane protein OPG140|Variola virus

Query: 4  CAPHTV 9
          CAPH V
Sbjct: 71 CAPHRV 76


>sp|PG140_VAR67|VIRION membrane protein OPG140|Variola virus (isolate

Query: 4  CAPHTV 9
          CAPH V
Sbjct: 71 CAPHRV 76


>sp|PG140_VACCC|VIRION membrane protein OPG140|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4  CAPHTV 9
          CAPH V
Sbjct: 71 CAPHRV 76


>sp|PG140_MONPV|VIRION membrane protein OPG140|Monkeypox virus (MPXV)

Query: 4  CAPHTV 9
          CAPH V
Sbjct: 71 CAPHRV 76


>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)

Query: 3   TCAPH 7
           +CAPH
Sbjct: 332 SCAPH 336


>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   NATCAPHTV 9
           NA+ AP TV
Sbjct: 490 NASLAPETV 498


>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)

Query: 6   PHTVC 10
           PHTVC
Sbjct: 159 PHTVC 163


>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)

Query: 6   PHTVC 10
           PHTVC
Sbjct: 159 PHTVC 163


>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)

Query: 3   TCAPHTVC 10
           + APH VC
Sbjct: 629 STAPHRVC 636


>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)

Query: 1   NATCAP 6
           N+TC P
Sbjct: 569 NSTCTP 574


>sp|ORF49_HHV8P|PROTEIN ORF49|Human herpesvirus 8 type P

Query: 1   NATCAP 6
           N TCAP
Sbjct: 171 NGTCAP 176


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 3    TCAPHTV 9
            TC P T+
Sbjct: 2006 TCTPSTI 2012


>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   NATCAPHT 8
           N T  PHT
Sbjct: 559 NTTSTPHT 566


>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)

Query: 6   PHTVC 10
           PHT+C
Sbjct: 159 PHTIC 163


>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   NATCAPH 7
           NA+ APH
Sbjct: 324 NASLAPH 330


>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   NATCAPH 7
           NA+ APH
Sbjct: 324 NASLAPH 330


>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   NATCAPH 7
           NA+ APH
Sbjct: 324 NASLAPH 330


>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1

Query: 4   CAPHTV 9
           C PH++
Sbjct: 248 CGPHSI 253


>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1  NATCAPHTVC 10
          N T  P+ VC
Sbjct: 85 NTTKYPYRVC 94


>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  NATCAPHTVC 10
          N T  P+ VC
Sbjct: 85 NTTKYPYRVC 94


>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  NATCAPHTVC 10
          N T  P+ VC
Sbjct: 85 NTTKYPYRVC 94


>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human

Query: 4  CAPH 7
          CAPH
Sbjct: 52 CAPH 55


>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human

Query: 4  CAPH 7
          CAPH
Sbjct: 52 CAPH 55


>sp|KITH_VZVO|THYMIDINE kinase|Varicella-zoster virus (strain Oka vaccine)

Query: 4  CAPHTV 9
          C+PH +
Sbjct: 94 CSPHAI 99


>sp|KITH_VZVD|THYMIDINE kinase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4  CAPHTV 9
          C+PH +
Sbjct: 94 CSPHAI 99


>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human

Query: 4  CAPH 7
          CAPH
Sbjct: 52 CAPH 55




30|Sequence|146|155|PHTVCPVGWG

>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 2   HTVCPVGW 9
           HT+ PV W
Sbjct: 353 HTISPVNW 360


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 1    PHTVCPVG 8
            P  +CP+G
Sbjct: 1000 PQDICPLG 1007


>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)

Query: 2   HTVCPVGWG 10
           HT+ PV W 
Sbjct: 473 HTISPVSWS 481


>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)

Query: 1   PHTVC 5
           PHTVC
Sbjct: 159 PHTVC 163


Query: 1   PHTVCPVG 8
           P  +CP G
Sbjct: 491 PSAICPAG 498


>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)

Query: 1   PHTVC 5
           PHTVC
Sbjct: 159 PHTVC 163


>sp|UNG_HHV7J|URACIL-DNA glycosylase|Human herpesvirus 7 (strain JI)

Query: 2   HTVCPVGW 9
           H  CP+ W
Sbjct: 241 HNKCPIDW 248


>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)

Query: 1   PHTVC 5
           PHT+C
Sbjct: 159 PHTIC 163


>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain

Query: 4   VCPVGW 9
           VCP  W
Sbjct: 290 VCPTAW 295


>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain

Query: 4   VCPVGW 9
           VCP  W
Sbjct: 290 VCPTAW 295


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1    PHTVCPVG 8
            PH + P+G
Sbjct: 1661 PHIILPLG 1668


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 1    PHTVCPVG 8
            PH + P+G
Sbjct: 1661 PHIILPLG 1668


>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P

Query: 1   PHTVCPVG 8
           PH + PVG
Sbjct: 873 PHVLGPVG 880


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 3    TVCPVG 8
            T CP+G
Sbjct: 1639 TCCPIG 1644


>sp|VE6_HPV40|PROTEIN E6|Human papillomavirus 40

Query: 1  PHTVCP 6
          PH  CP
Sbjct: 59 PHAACP 64


>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4   VCPVGW 9
           +CP GW
Sbjct: 203 LCPAGW 208


>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 6  PVGWG 10
          PV WG
Sbjct: 47 PVSWG 51


>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain

Query: 6  PVGWG 10
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United

Query: 6  PVGWG 10
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 6  PVGWG 10
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 6  PVGWG 10
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 6  PVGWG 10
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 6  PVGWG 10
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 6  PVGWG 10
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain

Query: 6  PVGWG 10
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain

Query: 6  PVGWG 10
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 6  PVGWG 10
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United

Query: 6  PVGWG 10
          PV WG
Sbjct: 46 PVNWG 50


>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain

Query: 6  PVGWG 10
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain

Query: 6  PVGWG 10
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 6  PVGWG 10
          PV WG
Sbjct: 47 PVNWG 51


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 2  HTVCPV 7
          H VCP+
Sbjct: 79 HCVCPM 84


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 2  HTVCPV 7
          H VCP+
Sbjct: 79 HCVCPM 84


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 2    HTVCPVG 8
            HT CP G
Sbjct: 2027 HTTCPCG 2033


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 2  HTVCPV 7
          H VCP+
Sbjct: 79 HCVCPM 84


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 2  HTVCPV 7
          H VCP+
Sbjct: 81 HCVCPM 86


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 2  HTVCPV 7
          H VCP+
Sbjct: 79 HCVCPM 84


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 2    HTVCPVG 8
            HT CP G
Sbjct: 2026 HTTCPCG 2032


>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)

Query: 1  PHTVCPVGW 9
          P ++C  GW
Sbjct: 34 PVSLCGRGW 42


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 2  HTVCPV 7
          H VCP+
Sbjct: 81 HCVCPM 86


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 2  HTVCPV 7
          H VCP+
Sbjct: 79 HCVCPM 84


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 2  HTVCPV 7
          H VCP+
Sbjct: 79 HCVCPM 84


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 2  HTVCPV 7
          H VCP+
Sbjct: 81 HCVCPM 86


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 2  HTVCPV 7
          H VCP+
Sbjct: 80 HCVCPM 85


>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   PHTVCPV 7
           P  VCPV
Sbjct: 224 PGKVCPV 230


>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   PHTVCPV 7
           P  VCPV
Sbjct: 224 PGKVCPV 230


>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 4    VCPVG 8
            VCP+G
Sbjct: 1004 VCPLG 1008


>sp|PHOSP_VSNJO|PHOSPHOPROTEIN stomatitis New Jersey virus

Query: 2   HTVCPVG 8
           ++VCP G
Sbjct: 241 YSVCPEG 247


>sp|PHOSP_VSNJM|PHOSPHOPROTEIN stomatitis New Jersey virus

Query: 2   HTVCPVG 8
           ++VCP G
Sbjct: 241 YSVCPEG 247


>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain

Query: 6  PVGWG 10
          PV WG
Sbjct: 47 PVDWG 51


>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain

Query: 6  PVGWG 10
          PV WG
Sbjct: 47 PVDWG 51


>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 6  PVGWG 10
          PV WG
Sbjct: 47 PVDWG 51


>sp|VE7_HPV40|PROTEIN E7|Human papillomavirus 40

Query: 2   HTVCP 6
           H VCP
Sbjct: 101 HIVCP 105


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2   HTVCPVGWG 10
           HT    GWG
Sbjct: 374 HTYVDRGWG 382


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2   HTVCPVGWG 10
           HT    GWG
Sbjct: 374 HTYVDRGWG 382


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2   HTVCPVGWG 10
           HT    GWG
Sbjct: 374 HTYVDRGWG 382


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2   HTVCPVGWG 10
           HT    GWG
Sbjct: 374 HTYVDRGWG 382


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2   HTVCPVGWG 10
           HT    GWG
Sbjct: 374 HTYVDRGWG 382


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 2    HTVCPVGW 9
            H++C + W
Sbjct: 2106 HSLCLLAW 2113


>sp|US15_HCMVM|MEMBRANE protein US15|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2  HTVCPVGW 9
          HT   VGW
Sbjct: 43 HTYGAVGW 50


>sp|US15_HCMVA|UNCHARACTERIZED protein HVLF3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2  HTVCPVGW 9
          HT   VGW
Sbjct: 43 HTYGAVGW 50


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2    HTVCPVG 8
            HT CP G
Sbjct: 2026 HTRCPCG 2032




31|Sequence|151|160|PVGWGVRKKG

>sp|BILF2_EBVB9|GLYCOPROTEIN BILF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3   GWGVRKKG 10
           GWG R+KG
Sbjct: 237 GWGRRRKG 244


>sp|NCAP_CVH22|NUCLEOPROTEIN coronavirus 229E (HCoV-229E)

Query: 1   PVGWGVRKK 9
           P G+GVR+K
Sbjct: 112 PTGYGVRRK 120


>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)

Query: 3   GWGVRKK 9
           GW  RKK
Sbjct: 404 GWSARKK 410


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 4    WGVRKK 9
            WG RKK
Sbjct: 1355 WGSRKK 1360


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 4    WGVRKK 9
            WG RKK
Sbjct: 1355 WGSRKK 1360


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1    PVGWGVR 7
            P+ WGV+
Sbjct: 2408 PIVWGVK 2414


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1    PVGWGVR 7
            P+ WGV+
Sbjct: 2408 PIVWGVK 2414


>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 692 PTGWGL 697


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 692 PTGWGL 697


>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 692 PTGWGL 697


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 692 PTGWGL 697


>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 698 PTGWGL 703


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 692 PTGWGL 697


>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 698 PTGWGL 703


>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 702 PTGWGL 707


>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 702 PTGWGL 707


>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 692 PTGWGL 697


>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 702 PTGWGL 707


>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 702 PTGWGL 707


>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 705 PTGWGL 710


>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 705 PTGWGL 710


>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 705 PTGWGL 710


>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 705 PTGWGL 710


>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 698 PTGWGL 703


>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 702 PTGWGL 707


>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 702 PTGWGL 707


>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 705 PTGWGL 710


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1    PVGWG 5
            P GWG
Sbjct: 2017 PTGWG 2021


>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 702 PTGWGL 707


>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 705 PTGWGL 710


>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 1    PVGWG 5
            P GWG
Sbjct: 1990 PTGWG 1994


>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 1    PVGWG 5
            P GWG
Sbjct: 1995 PTGWG 1999


>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 692 PTGWGL 697


>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C

Query: 1   PVGWGV 6
           P GWG+
Sbjct: 703 PTGWGL 708


>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1  PVGWG 5
          PV WG
Sbjct: 47 PVSWG 51


>sp|UL20_VZVD|PROTEIN UL20 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   PVGWG 5
           PV WG
Sbjct: 194 PVSWG 198


>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1  PVGWG 5
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United

Query: 1  PVGWG 5
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1  PVGWG 5
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 1  PVGWG 5
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1  PVGWG 5
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1  PVGWG 5
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 1  PVGWG 5
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1  PVGWG 5
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1  PVGWG 5
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 1  PVGWG 5
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United

Query: 1  PVGWG 5
          PV WG
Sbjct: 46 PVNWG 50


>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1  PVGWG 5
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1  PVGWG 5
          PV WG
Sbjct: 47 PVNWG 51


>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 1  PVGWG 5
          PV WG
Sbjct: 47 PVNWG 51


>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus

Query: 4   WGVRKKG 10
           W ++KKG
Sbjct: 520 WDLKKKG 526


>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 4   WGVRKKG 10
           W ++KKG
Sbjct: 520 WDLKKKG 526


>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)

Query: 4   WGVRKKG 10
           W ++KKG
Sbjct: 520 WDLKKKG 526


>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4   WGVRKKG 10
           W ++KKG
Sbjct: 520 WDLKKKG 526


>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)

Query: 4   WGVRKKG 10
           W ++KKG
Sbjct: 520 WDLKKKG 526


>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)

Query: 4   WGVRKKG 10
           W ++KKG
Sbjct: 520 WDLKKKG 526


>sp|TEG7_HHV2H|TEGUMENT protein UL51|Human herpesvirus 2 (strain HG52)

Query: 3  GWGVR 7
          GWG R
Sbjct: 10 GWGTR 14


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 2    VGWGVR 7
            V WG+R
Sbjct: 2314 VSWGLR 2319


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 2    VGWGVR 7
            V WG+R
Sbjct: 2314 VSWGLR 2319


>sp|BHLF1_EBVB9|UNCHARACTERIZED protein BHLF1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1  PVGWGVR 7
          P GWG R
Sbjct: 36 PPGWGQR 42


>sp|TEG7_HHV11|TEGUMENT protein UL51|Human herpesvirus 1 (strain 17)

Query: 3  GWGVR 7
          GWG R
Sbjct: 10 GWGAR 14




32|Sequence|156|165|VRKKGTETED

>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19

Query: 4   KGTETED 10
           KGT T+D
Sbjct: 166 KGTSTDD 172


>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 1   VRKKGTETED 10
           V K+G E ED
Sbjct: 424 VFKEGDEAED 433


>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)

Query: 1   VRKKGTETED 10
           V K+G E ED
Sbjct: 424 VFKEGDEAED 433


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 1    VRKKGTETED 10
            +RK   ETED
Sbjct: 1600 IRKYIPETED 1609


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 1    VRKKGTETED 10
            +RK   ETED
Sbjct: 1600 IRKYIPETED 1609


>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins

Query: 1   VRKKGTETED 10
           V K G E ED
Sbjct: 424 VFKNGDEAED 433


>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)

Query: 1   VRKKGTETED 10
           V K+G E ED
Sbjct: 424 VFKEGDEAED 433


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   VRKKGTETE 9
           +RK G +TE
Sbjct: 556 LRKPGDQTE 564


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 1   VRKKGTETE 9
           +RK G +TE
Sbjct: 556 LRKPGDQTE 564




33|Sequence|161|170|TETEDVRCKQ

>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 4    EDVRCK 9
            ED+RC+
Sbjct: 2113 EDIRCR 2118


>sp|PG104_MONPV|PROTEIN OPG104|Monkeypox virus (MPXV)

Query: 1  TETEDVRCK 9
          T  +D+RCK
Sbjct: 12 TNKDDIRCK 20


>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)

Query: 1   TETEDVRCK 9
           T+T++V CK
Sbjct: 151 TKTKEVDCK 159


>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   TETEDVRCK 9
           T+T++V CK
Sbjct: 151 TKTKEVDCK 159


>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   TEDVRCK 9
           T DV CK
Sbjct: 299 TSDVYCK 305


>sp|UL38_HHV6H|APOPTOSIS inhibitor U19|Human herpesvirus 6B (HHV-6 variant

Query: 3   TEDVRCKQ 10
           T+DV CK 
Sbjct: 335 TDDVGCKH 342




34|Sequence|166|175|VRCKQCARGT

>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12

Query: 2  RCKQCAR 8
          RC+ CAR
Sbjct: 91 RCEHCAR 97


>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 1    VRCKQCAR 8
            +RCK C R
Sbjct: 1297 IRCKGCIR 1304


>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 1    VRCKQCAR 8
            +RCK C R
Sbjct: 1297 IRCKGCIR 1304


>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2

Query: 2   RCKQCAR 8
           RC+ CAR
Sbjct: 227 RCQYCAR 233


>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5

Query: 2   RCKQCAR 8
           RC+ CAR
Sbjct: 227 RCQYCAR 233


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 3    CKQCARG 9
            C+QCA G
Sbjct: 1181 CEQCAAG 1187


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 3    CKQCARG 9
            C+QCA G
Sbjct: 1181 CEQCAAG 1187


>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40

Query: 2   RCKQCAR 8
           RC+ CAR
Sbjct: 218 RCEYCAR 224


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)

Query: 1    VRCKQCAR 8
            +RC++C R
Sbjct: 1315 LRCQKCIR 1322


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 1    VRCKQCAR 8
            +RC +C R
Sbjct: 1315 LRCNRCVR 1322


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 1    VRCKQCAR 8
            +RC +C R
Sbjct: 1315 LRCNRCVR 1322


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 1    VRCKQCAR 8
            +RC +C R
Sbjct: 1315 LRCNRCVR 1322


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 1    VRCKQCAR 8
            +RC +C R
Sbjct: 1315 LRCNRCVR 1322


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 1    VRCKQCAR 8
            +RC +C R
Sbjct: 1315 LRCNRCVR 1322


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 1    VRCKQCAR 8
            +RC +C R
Sbjct: 1315 LRCNRCVR 1322


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 1    VRCKQCAR 8
            +RC +C R
Sbjct: 1315 LRCNRCVR 1322


>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4

Query: 2   RCKQCAR 8
           RC+ C R
Sbjct: 222 RCEHCGR 228


>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 2   RCKQC 6
           RC+QC
Sbjct: 846 RCQQC 850


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)

Query: 1    VRCKQCAR 8
            +RC +C R
Sbjct: 1316 LRCNKCIR 1323


>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3

Query: 2   RCKQC 6
           +CKQC
Sbjct: 845 QCKQC 849


>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1

Query: 2   RCKQC 6
           +CKQC
Sbjct: 845 QCKQC 849


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 1    VRCKQCAR 8
            +RC +C R
Sbjct: 1316 LRCPKCIR 1323


>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7

Query: 2   RCKQCAR 8
           RC+ C R
Sbjct: 152 RCEYCGR 158


>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)

Query: 5   QCARG 9
           QCARG
Sbjct: 860 QCARG 864


>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain

Query: 2   RCKQCAR 8
           RC  C R
Sbjct: 231 RCSDCVR 237


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 1    VRCKQCAR 8
            V C++C R
Sbjct: 1287 VTCRKCIR 1294


>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12

Query: 2   RCKQCARGT 10
           RC+QC  G+
Sbjct: 436 RCRQCECGS 444


>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2   RCKQCARGT 10
           RC +CA G+
Sbjct: 351 RCIRCAVGS 359


>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2   RCKQCARGT 10
           RC +CA G+
Sbjct: 351 RCVRCAVGS 359


>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2   RCKQCARGT 10
           RC +CA G+
Sbjct: 352 RCIRCAVGS 360


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2   RCKQCARGT 10
           RC +CA G+
Sbjct: 352 RCIRCAVGS 360


>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2   RCKQCARGT 10
           RC +CA G+
Sbjct: 352 RCIRCAVGS 360


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2   RCKQCARGT 10
           RC +CA G+
Sbjct: 352 RCIRCAVGS 360


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1    VRCKQCAR 8
            + CK C R
Sbjct: 1297 ITCKSCLR 1304


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1    VRCKQCAR 8
            + CK C R
Sbjct: 1297 ITCKSCLR 1304


>sp|E413_ADE12|PROBABLE early E4 13 kDa|Human adenovirus A serotype 12

Query: 2  RCKQCARG 9
          RCKQ  RG
Sbjct: 68 RCKQKGRG 75


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1    VRCKQCAR 8
            + CK C R
Sbjct: 1297 IACKSCLR 1304


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1    VRCKQCAR 8
            + CK C R
Sbjct: 1297 IACKSCLR 1304


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1    VRCKQCAR 8
            + CK C R
Sbjct: 1297 IACKSCLR 1304


>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)

Query: 3   CKQCA 7
           CK+CA
Sbjct: 655 CKKCA 659


>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)

Query: 3   CKQCA 7
           CK+CA
Sbjct: 655 CKKCA 659


>sp|V_PIV5|NON-STRUCTURAL protein V|Parainfluenza virus 5 (strain W3)

Query: 1   VRCKQCARGT 10
           V C +C R T
Sbjct: 213 VTCSECERDT 222


>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37

Query: 3   CKQCAR 8
           CK C R
Sbjct: 192 CKTCCR 197


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 2    RCKQC 6
            RC QC
Sbjct: 2960 RCAQC 2964


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 2    RCKQC 6
            RC QC
Sbjct: 2960 RCAQC 2964


>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse

Query: 2   RCKQCARG 9
           +C+QC  G
Sbjct: 418 KCRQCTCG 425


>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United

Query: 2   RCKQCARG 9
           +C+QC  G
Sbjct: 418 KCRQCTCG 425


>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19

Query: 1   VRCKQCAR 8
           VRC+ C R
Sbjct: 121 VRCQNCMR 128


>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 2   RCKQCARG 9
           +C+QC  G
Sbjct: 418 KCRQCTCG 425




35|Sequence|171|180|CARGTFSDVP

>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3  RGTFSDVP 10
          RGTF+ VP
Sbjct: 74 RGTFTSVP 81


>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 1    CARGTFSDV 9
            CAR  F+D+
Sbjct: 1497 CARKVFNDI 1505


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 1    CARGTFSDV 9
            CAR  F+D+
Sbjct: 1496 CARKVFNDI 1504


>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40

Query: 1  CARGTFSDVP 10
          CAR T   VP
Sbjct: 8  CARLTGQSVP 17


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 5   TFSDVP 10
           TFSD+P
Sbjct: 682 TFSDMP 687


>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5

Query: 1  CARGTFSDVP 10
          CAR T   VP
Sbjct: 8  CARLTGQSVP 17


>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2

Query: 1  CARGTFSDVP 10
          CAR T   VP
Sbjct: 8  CARLTGQSVP 17


>sp|US09_HCMVM|MEMBRANE glycoprotein US9|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   RGTFSD 8
           RG FSD
Sbjct: 95  RGNFSD 100


>sp|US09_HCMVA|UNIQUE short US9 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   RGTFSD 8
           RG FSD
Sbjct: 95  RGNFSD 100




36|Sequence|176|185|FSDVPSSVMK

>sp|PG053_VARV|EFC-ASSOCIATED protein OPG053|Variola virus

Query: 1   FSDVPSSVMK 10
            +DVPS+V K
Sbjct: 93  LNDVPSAVSK 102


>sp|PG053_VAR67|EFC-ASSOCIATED protein OPG053|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   FSDVPSSVMK 10
            +DVPS+V K
Sbjct: 93  LNDVPSAVSK 102


>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1

Query: 1   FSDVPSSVM 9
           FSD P S++
Sbjct: 199 FSDAPESLI 207


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)

Query: 1   FSDVPSSVM 9
            +DVPSSV+
Sbjct: 113 LTDVPSSVV 121


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 1   FSDVPSSVM 9
            +DVPSSV+
Sbjct: 113 LTDVPSSVV 121


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 1   FSDVPSSVM 9
            +DVPSSV+
Sbjct: 113 LTDVPSSVV 121


>sp|PG038_VACCC|EARLY protein OPG038|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   SDVPSSVMK 10
           SD+P S+ K
Sbjct: 137 SDLPESIHK 145


>sp|PG038_MONPV|EARLY protein OPG038|Monkeypox virus (MPXV)

Query: 2   SDVPSSVMK 10
           SD+P S+ K
Sbjct: 137 SDLPESIHK 145


>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2

Query: 1   FSDVPSSVM 9
           FSD P S++
Sbjct: 199 FSDAPESLI 207


>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)

Query: 2   SDVPSSVM 9
           SDVPS+ +
Sbjct: 772 SDVPSTAL 779


>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)

Query: 2   SDVPSSVM 9
           SDVPS+ +
Sbjct: 772 SDVPSTAL 779


>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)

Query: 2   SDVPSSVM 9
           SDVPS+ +
Sbjct: 772 SDVPSTAL 779


>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   SDVPSSVMK 10
           SD+P S+ K
Sbjct: 555 SDIPKSLTK 563




37|Sequence|181|190|SSVMKCKAYT

>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 2    SVMKCKAYT 10
            SVM  +AYT
Sbjct: 2608 SVMAVRAYT 2616


>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39

Query: 2  SVMKCKAY 9
          ++ KCKAY
Sbjct: 68 NISKCKAY 75


>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P

Query: 6   CKAYT 10
           CK+YT
Sbjct: 294 CKSYT 298


>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)

Query: 2   SVMKCKAY 9
           +V KC+AY
Sbjct: 545 TVDKCQAY 552


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 5   KCKAYT 10
           KC AYT
Sbjct: 856 KCSAYT 861


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 5   KCKAYT 10
           KC AYT
Sbjct: 856 KCSAYT 861


>sp|NSP3_ROTHL|NON-STRUCTURAL protein 3|Rotavirus A (strain

Query: 1   SSVMKC 6
           SSV+KC
Sbjct: 134 SSVIKC 139




38|Sequence|186|195|CKAYTDCLSQ

>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 2    KAYTDCLS 9
            KAYTDC S
Sbjct: 1253 KAYTDCAS 1260


>sp|V073_ORFSA|PROTEIN ORFV073|Orf virus (strain Goat/Texas/SA00/2000) (OV-SA00)

Query: 1   CKAYTDCLS 9
           C+ YT C+S
Sbjct: 127 CRTYTTCMS 135


>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3   AYTDCLSQ 10
           A TDCLSQ
Sbjct: 896 AATDCLSQ 903


>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3   AYTDCLSQ 10
           A TDCLSQ
Sbjct: 896 AATDCLSQ 903


>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3   AYTDCLSQ 10
           A TDCLSQ
Sbjct: 896 AATDCLSQ 903


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 4    YTDCLSQ 10
            Y DCLS+
Sbjct: 1126 YNDCLSK 1132


Query: 1    CKAYTDCL 8
            CKA   CL
Sbjct: 995  CKALMQCL 1002


>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P

Query: 2   KAYTDCLSQ 10
           +A+TDC  +
Sbjct: 294 RAFTDCYKE 302


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 4    YTDCLSQ 10
            Y+DCL++
Sbjct: 1127 YSDCLAK 1133


Query: 1    CKAYTDCL 8
            CKA   CL
Sbjct: 996  CKALMQCL 1003


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 4    YTDCLSQ 10
            Y+DCL++
Sbjct: 1135 YSDCLAK 1141


Query: 1    CKAYTDCL 8
            CKA   CL
Sbjct: 1004 CKALMQCL 1011


>sp|UL79_HHV8P|PROTEIN UL79 homolog|Human herpesvirus 8 type P

Query: 1   CKAYTDCL 8
           C+AY D L
Sbjct: 100 CEAYRDSL 107


>sp|UL119_HCMVA|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain

Query: 1   CKAYTDC 7
           C A TDC
Sbjct: 116 CYARTDC 122


>sp|UL119_HCMVM|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain

Query: 1   CKAYTDC 7
           C A TDC
Sbjct: 116 CYARTDC 122


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 2   KAYTDCLS 9
           K+Y +CL+
Sbjct: 397 KSYQECLA 404


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 2   KAYTDCLS 9
           K+Y +CL+
Sbjct: 397 KSYQECLA 404


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 2   KAYTDCLS 9
           K+Y +CL+
Sbjct: 397 KSYQECLA 404


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 2   KAYTDCLS 9
           K+Y +CL+
Sbjct: 397 KSYQECLA 404


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 2   KAYTDCLS 9
           K+Y +CL+
Sbjct: 397 KSYQECLA 404


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 2   KAYTDCLS 9
           K+Y +CL+
Sbjct: 397 KSYQECLA 404


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 2   KAYTDCLS 9
           K+Y +CL+
Sbjct: 397 KSYQECLA 404


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired

Query: 2   KAYTDCLS 9
           K+Y +CL+
Sbjct: 398 KSYQECLA 405


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 2   KAYTDCLS 9
           K+Y +CL+
Sbjct: 397 KSYQECLA 404


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 1   CKAYTDCLS 9
           CKA  +CL+
Sbjct: 718 CKARRECLT 726


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 1   CKAYTDCLS 9
           CKA  +CL+
Sbjct: 718 CKARRECLT 726


>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)

Query: 1   CKAYTDCLS 9
           CKA  +CL+
Sbjct: 718 CKARRECLT 726


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 3   AYTDC 7
           AY+DC
Sbjct: 542 AYSDC 546


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 3   AYTDC 7
           AY+DC
Sbjct: 542 AYSDC 546


>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1   CKAYTDCL 8
           CK +T+C+
Sbjct: 334 CKLFTECI 341


>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka

Query: 4  YTDCLSQ 10
          Y DCL++
Sbjct: 43 YLDCLTE 49


>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)

Query: 4  YTDCLSQ 10
          Y DCL++
Sbjct: 43 YLDCLTE 49


>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 2   KAYTDCL 8
           K Y DCL
Sbjct: 835 KQYGDCL 841


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 2   KAYTDCLSQ 10
           + Y DC+ Q
Sbjct: 907 QGYDDCMQQ 915


>sp|PG189_VARV|ANKYRIN repeat protein OPG189|Variola virus

Query: 1   CKAYTDCLS 9
           C  YT C++
Sbjct: 423 CIKYTACMT 431


>sp|PG189_VAR67|ANKYRIN repeat protein OPG189|Variola virus (isolate Human/India/Ind3/1967)

Query: 1   CKAYTDCLS 9
           C  YT C++
Sbjct: 423 CIKYTACMT 431


>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)

Query: 1   CKAYTDCLS 9
           C  YT C++
Sbjct: 426 CIKYTACMT 434


>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989

Query: 2   KAYTDC 7
           KAY++C
Sbjct: 108 KAYSNC 113




39|Sequence|191|200|DCLSQNLVVI

>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)

Query: 1   DCLSQN 6
           +CLSQN
Sbjct: 283 ECLSQN 288


>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 3    LSQNLVV 9
            LSQNL+V
Sbjct: 1623 LSQNLLV 1629


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    CLSQNLVVI 10
            CLS   VVI
Sbjct: 1674 CLSTGCVVI 1682


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2    CLSQNLVVI 10
            CLS   VVI
Sbjct: 1674 CLSTGCVVI 1682


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2    CLSQNLVVI 10
            CLS   VVI
Sbjct: 1674 CLSTGCVVI 1682


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 3    LSQNLVV 9
            LSQNL++
Sbjct: 1623 LSQNLLI 1629




40|Sequence|196|205|NLVVIKPGTK

>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United

Query: 1   NLVVIKPGTK 10
           NLVV  PG++
Sbjct: 624 NLVVASPGSQ 633


>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 1   NLVVIKPG 8
           + VVIKPG
Sbjct: 429 DFVVIKPG 436


>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)

Query: 1   NLVVIKPG 8
           + VVIKPG
Sbjct: 429 DFVVIKPG 436


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 2   LVVIKPG 8
            VVIKPG
Sbjct: 429 FVVIKPG 435


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 2   LVVIKPG 8
            VVIKPG
Sbjct: 429 FVVIKPG 435


>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)

Query: 2   LVVIKPG 8
            VVIKPG
Sbjct: 429 FVVIKPG 435


>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9

Query: 3   VVIKPGT 9
           VV KPGT
Sbjct: 288 VVYKPGT 294


>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)

Query: 1   NLVVIKPG 8
             VVIKPG
Sbjct: 428 EFVVIKPG 435


>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)

Query: 1   NLVVIKPG 8
             VVIKPG
Sbjct: 428 EFVVIKPG 435


>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7

Query: 3   VVIKPGT 9
           VV KPGT
Sbjct: 289 VVYKPGT 295


>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)

Query: 2   LVVIKPG 8
            VVIKPG
Sbjct: 429 FVVIKPG 435


>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16

Query: 3   VVIKPGTK 10
           +V KPGT+
Sbjct: 283 IVYKPGTE 290


>sp|CAPSH_ADE04|HEXON protein|Human adenovirus E serotype 4

Query: 3   VVIKPGTK 10
           +V KPGT+
Sbjct: 182 IVYKPGTE 189




41|Sequence|201|210|KPGTKETDNV

>sp|11K_PAVHV|HOST-MODULATION protein 11K|Human parvovirus B19 (strain HV)

Query: 1  KPGTKETDNV 10
          +P TK+ DNV
Sbjct: 58 QPNTKDIDNV 67


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1  KPGTKET 7
          KPG+K+T
Sbjct: 72 KPGSKKT 78


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1  KPGTKET 7
          KPG+K+T
Sbjct: 72 KPGSKKT 78


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1  KPGTKET 7
          KPG+K+T
Sbjct: 72 KPGSKKT 78


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1  KPGTKET 7
          KPG+K+T
Sbjct: 72 KPGSKKT 78


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1  KPGTKET 7
          KPG+K+T
Sbjct: 72 KPGSKKT 78


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1  KPGTKET 7
          KPG+K+T
Sbjct: 72 KPGSKKT 78


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1  KPGTKET 7
          KPG+K+T
Sbjct: 72 KPGSKKT 78


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1  KPGTKET 7
          KPG+K+T
Sbjct: 72 KPGSKKT 78


>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)

Query: 2   PGTKETDNV 10
           PGT   DN+
Sbjct: 459 PGTNSNDNL 467


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 2    PGTKETD 8
            P T ETD
Sbjct: 1557 PATHETD 1563


>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)

Query: 2   PGTKETDNV 10
           PGT  T+N+
Sbjct: 225 PGTFLTENI 233




42|Sequence|206|215|ETDNVCGTLP

>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)

Query: 1   ETDNVCGTL 9
           +TDNVC T 
Sbjct: 259 QTDNVCITF 267


>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)

Query: 1   ETDNVC 6
           +TDNVC
Sbjct: 257 QTDNVC 262


>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5   VCGTLP 10
           VCGT P
Sbjct: 429 VCGTCP 434


>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5   VCGTLP 10
           VCGT P
Sbjct: 429 VCGTCP 434


>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate

Query: 5   VCGTLP 10
           VCGT P
Sbjct: 720 VCGTAP 725


>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United

Query: 5   VCGTLP 10
           VCGT P
Sbjct: 720 VCGTAP 725


>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)

Query: 6   CGTLP 10
           CG+LP
Sbjct: 228 CGSLP 232


>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 6   CGTLP 10
           CG+LP
Sbjct: 228 CGSLP 232


>sp|U21_HHV6Z|U21 glycoprotein|Human herpesvirus 6B (strain Z29)

Query: 3   DNVCGTLP 10
           DNV  TLP
Sbjct: 333 DNVIVTLP 340


>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   DNVCGTLP 10
           DNV  TLP
Sbjct: 333 DNVIVTLP 340


>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 6   CGTLP 10
           CGT+P
Sbjct: 143 CGTVP 147


>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 6   CGTLP 10
           CGT+P
Sbjct: 149 CGTVP 153


>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)

Query: 1   ETDNVCGTL 9
           +TDN C T 
Sbjct: 267 QTDNPCYTF 275


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    ETDNVC 6
            E DN+C
Sbjct: 1148 EADNLC 1153


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1  ETDNVC 6
          ETD +C
Sbjct: 48 ETDGIC 53


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1  ETDNVC 6
          ETD +C
Sbjct: 48 ETDGIC 53


>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)

Query: 6   CGTLP 10
           CGT+P
Sbjct: 495 CGTIP 499


>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)

Query: 6   CGTLP 10
           CGT+P
Sbjct: 495 CGTIP 499


>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)

Query: 3   DNVCGTL 9
           DN CG L
Sbjct: 117 DNSCGCL 123


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 2    TDNVCGTLP 10
            T NVC   P
Sbjct: 1075 TSNVCKRCP 1083


>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4   NVCGTLP 10
           N+C T P
Sbjct: 146 NLCATAP 152


>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4   NVCGTLP 10
           N+C T P
Sbjct: 146 NLCATAP 152




43|Sequence|211|220|CGTLPSFSSS

>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)

Query: 1   CGTLPSFSSS 10
           CG+LP+F+ S
Sbjct: 228 CGSLPAFTRS 237


>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   CGTLPSFSSS 10
           CG+LP+F+ S
Sbjct: 228 CGSLPAFTRS 237


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 1    CGTLPSFSS 9
            C TLP+FS+
Sbjct: 2174 CLTLPAFST 2182


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 1    CGTLPSFSS 9
            C TLP+FS+
Sbjct: 2184 CLTLPAFST 2192


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 1    CGTLPSFSS 9
            C TLP+FS+
Sbjct: 2165 CLTLPAFST 2173


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 1    CGTLPSFSS 9
            C TLP+FS+
Sbjct: 2167 CLTLPAFST 2175


>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1

Query: 2   GTLPSFSSS 10
           GTLP F S+
Sbjct: 187 GTLPRFPST 195


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 1    CGTLPSFSS 9
            C TLP+FS+
Sbjct: 2186 CLTLPAFST 2194


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 1    CGTLPSFSS 9
            C TLP+FS+
Sbjct: 2177 CLTLPAFST 2185


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 1    CGTLPSFSS 9
            C TLP+FS+
Sbjct: 2176 CLTLPAFST 2184


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 1    CGTLPSFSS 9
            C TLP+FS+
Sbjct: 2166 CLTLPAFST 2174


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 1    CGTLPSFSS 9
            C TLP+FS+
Sbjct: 2166 CLTLPAFST 2174


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 1    CGTLPSFSS 9
            C TLP+FS+
Sbjct: 2179 CLTLPAFST 2187


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 1    CGTLPSFSS 9
            C TLP+FS+
Sbjct: 2176 CLTLPAFST 2184


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 1    CGTLPSFSS 9
            C TLP+FS+
Sbjct: 2178 CLTLPAFST 2186


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 1    CGTLPSFSS 9
            C TLP+FS+
Sbjct: 2167 CLTLPAFST 2175


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 1    CGTLPSFSS 9
            C TLP+FS+
Sbjct: 2168 CLTLPAFST 2176


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 1    CGTLPSFSS 9
            C TLP+FS+
Sbjct: 2168 CLTLPAFST 2176


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 1    CGTLPSFSS 9
            C TLP+FS+
Sbjct: 2168 CLTLPAFST 2176


>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   CGTLPSFS 8
           CGT+PS +
Sbjct: 143 CGTVPSMT 150


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    CGTLPSFS 8
            CG++PS S
Sbjct: 2036 CGSMPSGS 2043


>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4

Query: 3  TLPSFSS 9
          TLPSFSS
Sbjct: 30 TLPSFSS 36


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    CGTLPSFS 8
            CG++PS S
Sbjct: 1869 CGSMPSGS 1876


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    CGTLPSFS 8
            CG++PS S
Sbjct: 2035 CGSMPSGS 2042


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    CGTLPSFS 8
            CG++PS S
Sbjct: 2035 CGSMPSGS 2042


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    CGTLPSFS 8
            CG++PS S
Sbjct: 2035 CGSMPSGS 2042


>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   CGTLPSFS 8
           CGT+PS +
Sbjct: 149 CGTVPSMN 156


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    CGTLPSFS 8
            CG++PS S
Sbjct: 2035 CGSMPSGS 2042


>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse

Query: 1    CGTLPSF 7
            C T+P F
Sbjct: 1607 CSTMPEF 1613


>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United

Query: 1    CGTLPSF 7
            C T+P F
Sbjct: 1607 CSTMPEF 1613


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 1    CGTLPSFSS 9
            C +LP+FS+
Sbjct: 2170 CLSLPAFST 2178


>sp|X_HBVC7|PROTEIN X|Hepatitis B virus genotype C

Query: 2  GTLPSFSSS 10
          GTLPS SSS
Sbjct: 35 GTLPSPSSS 43


>sp|X_HBVC3|PROTEIN X|Hepatitis B virus genotype C

Query: 2  GTLPSFSSS 10
          GTLPS SSS
Sbjct: 35 GTLPSPSSS 43


>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)

Query: 1   CGTLPSFS 8
           C T+PSFS
Sbjct: 231 CVTVPSFS 238


>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)

Query: 2   GTLPSF 7
           GTLP F
Sbjct: 380 GTLPGF 385


>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48

Query: 2   GTLPSFSS 9
           GTLPS+ S
Sbjct: 278 GTLPSWVS 285


>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   GTLPSFS 8
           GT+PS S
Sbjct: 475 GTVPSLS 481


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   GTLPSFS 8
           GT+PS S
Sbjct: 476 GTVPSLS 482


>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   CGTLPSFSS 9
           C T P F+S
Sbjct: 388 CNTSPLFNS 396


>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)

Query: 4  LPSFSSS 10
          +P FSSS
Sbjct: 85 IPKFSSS 91


>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 4  LPSFSSS 10
          +P FSSS
Sbjct: 85 IPKFSSS 91




44|Sequence|216|225|SFSSSTSPSP

>sp|VE2_HPV12|REGULATORY protein E2|Human papillomavirus 12

Query: 3   SSSTSPSP 10
           SSSTSP+P
Sbjct: 359 SSSTSPTP 366


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1   SFSSSTS 7
           SFS+STS
Sbjct: 479 SFSASTS 485




45|Sequence|221|230|TSPSPGTAIF

>sp|FUS_MUMP1|FUSION glycoprotein F0|Mumps virus (strain SBL-1) (MuV)

Query: 1  TSPSPGT 7
          TSPSPG+
Sbjct: 91 TSPSPGS 97


>sp|FUS_MUMPS|FUSION glycoprotein F0|Mumps virus (strain SBL) (MuV)

Query: 1  TSPSPGT 7
          TSPSPG+
Sbjct: 91 TSPSPGS 97


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 3    PSPGTAI 9
            P PGTA+
Sbjct: 1058 PCPGTAV 1064


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 1    TSPSPG 6
            +SPSPG
Sbjct: 2671 SSPSPG 2676


>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)

Query: 2  SPSPGTAIF 10
          +P PG A+F
Sbjct: 84 NPDPGRALF 92


>sp|FUS_MUMPR|FUSION glycoprotein F0|Mumps virus (strain RW) (MuV)

Query: 2  SPSPGT 7
          SPSPG+
Sbjct: 92 SPSPGS 97


>sp|FUS_MUMPZ|FUSION glycoprotein F0|Mumps virus genotype N (strain

Query: 2  SPSPGT 7
          SPSPG+
Sbjct: 92 SPSPGS 97


>sp|FUS_MUMPK|FUSION glycoprotein F0|Mumps virus (strain Kilham) (MuV)

Query: 2  SPSPGT 7
          SPSPG+
Sbjct: 92 SPSPGS 97


>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1   TSPSPGTAI 9
           T+PSP T I
Sbjct: 228 TNPSPDTRI 236


>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   TSPSPGTAI 9
           T+PSP T I
Sbjct: 228 TNPSPDTRI 236


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 3    PSPGTAI 9
            P PGT++
Sbjct: 1057 PCPGTSV 1063


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 3    PSPGTAI 9
            P PGT++
Sbjct: 1057 PCPGTSV 1063


>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 1   TSPSPG 6
           TSPSPG
Sbjct: 655 TSPSPG 660


>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin)

Query: 1  TSPSPGTA 8
          TSP+P T+
Sbjct: 27 TSPAPSTS 34


>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  TSPSPGTA 8
          TSP+P T+
Sbjct: 27 TSPAPSTS 34


>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)

Query: 2   SPSPGTA 8
           SPSPG A
Sbjct: 233 SPSPGAA 239


>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)

Query: 2   SPSPG 6
           SPSPG
Sbjct: 453 SPSPG 457


>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)

Query: 2   SPSPG 6
           SPSPG
Sbjct: 453 SPSPG 457


>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   SPSPGTA 8
           +P PGTA
Sbjct: 246 NPQPGTA 252


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 3    PSPGTAI 9
            P PGT +
Sbjct: 1058 PCPGTTV 1064


>sp|HBSAG_HBVB6|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 1   TSPSPGTAIF 10
           T+P+ GT++F
Sbjct: 299 TTPAQGTSMF 308


>sp|HBSAG_HBVB3|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 1   TSPSPGTAIF 10
           T+P+ GT++F
Sbjct: 299 TTPAQGTSMF 308


>sp|HBSAG_HBVB7|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 1   TSPSPGTAIF 10
           T+P+ GT++F
Sbjct: 299 TTPAQGTSMF 308


>sp|PG110_VACCC|LATE transcription elongation factor OPG110|Vaccinia virus (strain

Query: 2  SPSPG 6
          SPSPG
Sbjct: 89 SPSPG 93


>sp|HBSAG_HBVB5|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 1   TSPSPGTAIF 10
           T+P+ GT++F
Sbjct: 299 TTPAQGTSMF 308


>sp|HBSAG_HBVB1|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 1   TSPSPGTAIF 10
           T+P+ GT++F
Sbjct: 288 TTPAQGTSMF 297


>sp|HBSAG_HBVB2|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 1   TSPSPGTAIF 10
           T+P+ GT++F
Sbjct: 288 TTPAQGTSMF 297




46|Sequence|226|235|GTAIFPRPEH

>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1   GTAIFPRPE 9
           G+  FPRP+
Sbjct: 870 GSHAFPRPK 878


>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 4    IFPRPE 9
            IFP PE
Sbjct: 1744 IFPHPE 1749


>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)

Query: 5   FPRPE 9
           FPRPE
Sbjct: 262 FPRPE 266


>sp|PG031_VAR67|PROTEIN C4|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2   TAIFPRPE 9
           T I+P PE
Sbjct: 103 TLIYPTPE 110


>sp|PG031_VACCC|PROTEIN C4|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   TAIFPRPE 9
           T I+P PE
Sbjct: 103 TLIYPTPE 110


>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4  IFPRPEH 10
          ++P PEH
Sbjct: 64 VYPAPEH 70


>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4  IFPRPEH 10
          ++P PEH
Sbjct: 64 VYPAPEH 70


>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)

Query: 1   GTAIFPR 7
           GT I PR
Sbjct: 582 GTGIIPR 588


>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   GTAIFPR 7
           GT I PR
Sbjct: 582 GTGIIPR 588


>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain

Query: 2   TAIFPRPE 9
           + I+PRP+
Sbjct: 562 SVIYPRPQ 569




47|Sequence|231|240|PRPEHMETHE

>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P

Query: 3   PEHMETHE 10
           P H+ETHE
Sbjct: 101 PSHVETHE 108


>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas)

Query: 2  RPEHMET 8
          +PEH ET
Sbjct: 91 KPEHQET 97


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 4   EHMETH 9
           +HMETH
Sbjct: 852 KHMETH 857


>sp|VE8E2_HPV31|PROTEIN E8^E2C|Human papillomavirus 31

Query: 1  PR--PEHMETH 9
          PR  PEH  TH
Sbjct: 58 PRTEPEHRNTH 68


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 3   PEHMETHE 10
           PE++ET+E
Sbjct: 647 PENIETYE 654


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 3   PEHMETHE 10
           PE+ME +E
Sbjct: 647 PENMEAYE 654


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 3   PEHMETHE 10
           PE+ME +E
Sbjct: 647 PENMEAYE 654


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 3    PEHMETH 9
            PEH+ TH
Sbjct: 1077 PEHLATH 1083


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 3    PEHMETH 9
            PEH+ TH
Sbjct: 1077 PEHLATH 1083


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 3    PEHMETH 9
            PEH+ TH
Sbjct: 1077 PEHLATH 1083


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 3    PEHMETH 9
            PEH+ TH
Sbjct: 1077 PEHLATH 1083


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 3    PEHMETH 9
            PEH+ TH
Sbjct: 1077 PEHLATH 1083


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 3    PEHMETH 9
            PEH+ TH
Sbjct: 1077 PEHLATH 1083


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 3    PEHMETH 9
            PEH+ TH
Sbjct: 1077 PEHLATH 1083


>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus

Query: 2   RPEHM 6
           RP+HM
Sbjct: 166 RPQHM 170


>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate

Query: 2   RPEHM 6
           RP+HM
Sbjct: 166 RPQHM 170


>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   RPEHM 6
           RP+HM
Sbjct: 166 RPQHM 170


>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 2   RPEHM 6
           RP+HM
Sbjct: 166 RPQHM 170


>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)

Query: 2   RPEHM 6
           RP+HM
Sbjct: 166 RPQHM 170


>sp|VE2_HPV31|REGULATORY protein E2|Human papillomavirus 31

Query: 3   PEHMETH 9
           PEH  TH
Sbjct: 250 PEHRNTH 256


>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain

Query: 2   RPEHMETH 9
           RP++ E H
Sbjct: 125 RPQNQEQH 132


>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P

Query: 1   PRPEHMETHE 10
           PR ++   HE
Sbjct: 378 PRTQYQSDHE 387


>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)

Query: 1   PRPEHMETHE 10
           P   +ME+H+
Sbjct: 656 PSGRYMESHQ 665


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 1   PRPEHMETHE 10
           P  +H ETH+
Sbjct: 702 PGIDHPETHD 711




48|Sequence|236|245|METHEVPSST

>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   ETHEVP 7
           ETH++P
Sbjct: 686 ETHDIP 691


>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   ETHEVP 7
           ETH++P
Sbjct: 686 ETHDIP 691


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 1    METHEVP 7
            +ETH VP
Sbjct: 1477 IETHTVP 1483


>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 2    ETHEVP 7
            E HE+P
Sbjct: 1540 ELHEIP 1545




49|Sequence|241|250|VPSSTYVPKG

>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15

Query: 1   VPSSTYVPKG 10
           VP++  VP+G
Sbjct: 134 VPATDVVPQG 143


>sp|CEP1_HHV8P|CYTOPLASMIC envelopment protein 1|Human herpesvirus 8 type P

Query: 1  VPSSTYVPK 9
          VP ST+ PK
Sbjct: 13 VPMSTHAPK 21


>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)

Query: 1   VPSSTYVP 8
           +PSST+VP
Sbjct: 448 LPSSTHVP 455


>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   VPSSTYVP 8
           +PSST+VP
Sbjct: 448 LPSSTHVP 455


>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   VPSSTYVP 8
           +PSST+VP
Sbjct: 448 LPSSTHVP 455


>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   VPSSTYVP 8
           +PSST+VP
Sbjct: 448 LPSSTHVP 455


>sp|VIF_HV1AN|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1  VPSSTYVPKG 10
          V SS Y+P G
Sbjct: 51 VSSSVYIPVG 60


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 3   SSTYVP 8
           SSTYVP
Sbjct: 304 SSTYVP 309


>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /

Query: 4   STYVPK 9
           STY+PK
Sbjct: 367 STYLPK 372


>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)

Query: 4   STYVPK 9
           STY+PK
Sbjct: 367 STYLPK 372


>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4   STYVPK 9
           STY+PK
Sbjct: 367 STYLPK 372


>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 4   STYVPK 9
           STY+PK
Sbjct: 367 STYLPK 372


>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)

Query: 4   STYVPK 9
           STY+PK
Sbjct: 367 STYLPK 372


>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B

Query: 1   VPSSTYV 7
           VP +TY+
Sbjct: 296 VPDTTYI 302


>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A

Query: 1   VPSSTYV 7
           VP +TY+
Sbjct: 296 VPDTTYI 302


>sp|PG091_MONPV|PROTEIN OPG091|Monkeypox virus (MPXV)

Query: 5  TYVPKG 10
          TY P+G
Sbjct: 9  TYAPRG 14


>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)

Query: 5  TYVPK 9
          TY+PK
Sbjct: 42 TYIPK 46


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 3   SSTYVPK 9
           S+TYVP+
Sbjct: 399 SATYVPQ 405


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 3   SSTYVP 8
           SSTY+P
Sbjct: 304 SSTYIP 309


>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)

Query: 1    VPSSTYVPK 9
            VP+S Y P+
Sbjct: 2595 VPTSQYAPR 2603


>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P

Query: 3   SSTYVPKG 10
           +ST+VP G
Sbjct: 379 ASTHVPNG 386


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 2    PSSTYVPKG 10
            P+S  +PKG
Sbjct: 1806 PASVKLPKG 1814


>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P

Query: 2   PSSTYVP 8
           PS+ Y+P
Sbjct: 333 PSAAYMP 339


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 2    PSSTYVPKG 10
            P+S  +PKG
Sbjct: 1806 PASVKLPKG 1814


>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus

Query: 4   STYVPK 9
           STY+PK
Sbjct: 367 STYLPK 372


>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate

Query: 4   STYVPK 9
           STY+PK
Sbjct: 367 STYLPK 372


>sp|PG091_VARV|PROTEIN OPG091|Variola virus

Query: 5  TYVPKG 10
          TY P+G
Sbjct: 9  TYAPRG 14


>sp|PG091_VAR67|PROTEIN OPG091|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 5  TYVPKG 10
          TY P+G
Sbjct: 9  TYAPRG 14


>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)

Query: 4   STYVPK 9
           STY+PK
Sbjct: 367 STYLPK 372


>sp|PG091_VACCC|PROTEIN OPG091|Vaccinia virus (strain Copenhagen) (VACV)

Query: 5  TYVPKG 10
          TY P+G
Sbjct: 9  TYAPRG 14


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 1    VPSSTYV 7
            +P+STYV
Sbjct: 1883 LPNSTYV 1889


>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United

Query: 2   PSSTYVPKG 10
           P  TY PK 
Sbjct: 125 PIQTYQPKA 133


>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 3   SSTYVPK 9
           S+TY PK
Sbjct: 426 STTYTPK 432


>sp|VP2_POVK6|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 60)

Query: 2   PSSTYVPKG 10
           P+S Y P+G
Sbjct: 117 PTSGYNPQG 125


>sp|VP2_POVK3|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 380)

Query: 2   PSSTYVPKG 10
           P+S Y P+G
Sbjct: 117 PTSGYNPQG 125


>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)

Query: 3   SSTYVPK 9
           S+TY PK
Sbjct: 426 STTYTPK 432


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 3    SSTYVPKG 10
            SST++P G
Sbjct: 2316 SSTHLPTG 2323


>sp|VP2_POVKI|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 350)

Query: 2   PSSTYVPKG 10
           P+S Y P+G
Sbjct: 117 PTSGYNPQG 125


>sp|GL_VZVD|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   PSSTYVPKG 10
           PSST +P+ 
Sbjct: 136 PSSTNIPEN 144


>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)

Query: 1   VPSSTYVPKG 10
           +PS+  +P+G
Sbjct: 220 IPSTMQLPEG 229


>sp|GL_VZVO|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Oka vaccine)

Query: 2   PSSTYVPKG 10
           PSST +P+ 
Sbjct: 137 PSSTNIPEN 145


>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1

Query: 1   VPSSTYVPKG 10
           +PS T  P+G
Sbjct: 192 LPSQTTNPRG 201




50|Sequence|246|255|YVPKGMNSTE

>sp|MATRX_RABVI|MATRIX protein|Rabies virus (strain India) (RABV)

Query: 2   VPKGMN 7
           VP+GMN
Sbjct: 106 VPEGMN 111


>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5

Query: 3  PKGMNSTE 10
          P G+NST+
Sbjct: 18 PSGLNSTD 25


>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2

Query: 3  PKGMNSTE 10
          P G+NST+
Sbjct: 18 PSGLNSTD 25


>sp|MATRX_ABLVH|MATRIX protein|Australian bat lyssavirus (isolate Human/AUS/1998)

Query: 2   VPKGMN 7
           VP+GMN
Sbjct: 106 VPEGMN 111


>sp|MATRX_RABVE|MATRIX protein|Rabies virus (strain ERA) (RABV)

Query: 2   VPKGMN 7
           VP+GMN
Sbjct: 106 VPEGMN 111


>sp|MATRX_RABVP|MATRIX protein|Rabies virus (strain Pasteur vaccins

Query: 2   VPKGMN 7
           VP+GMN
Sbjct: 106 VPEGMN 111


>sp|MATRX_RABVA|MATRIX protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 2   VPKGMN 7
           VP+GMN
Sbjct: 106 VPEGMN 111


>sp|MATRX_RABVN|MATRIX protein|Rabies virus (strain Nishigahara RCEH)

Query: 2   VPKGMN 7
           VP+GMN
Sbjct: 106 VPEGMN 111


>sp|MATRX_RABVB|MATRIX protein|Rabies virus (strain silver-haired bat-associated)

Query: 2   VPKGMN 7
           VP+GMN
Sbjct: 106 VPEGMN 111


>sp|MATRX_RABVD|MATRIX protein|Rabies virus (strain China/DRV) (RABV)

Query: 2   VPKGMN 7
           VP+GMN
Sbjct: 106 VPEGMN 111


>sp|MATRX_RABVC|MATRIX protein|Rabies virus (strain CVS-11) (RABV)

Query: 2   VPKGMN 7
           VP+GMN
Sbjct: 106 VPEGMN 111


>sp|MATRX_RABVR|MATRIX protein|Rabies virus (strain China/MRV) (RABV)

Query: 2   VPKGMN 7
           VP+GMN
Sbjct: 106 VPEGMN 111


>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)

Query: 2   VPKGMN 7
           VP+GMN
Sbjct: 106 VPEGMN 111


>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 2   VPKGMNST 9
           V KG+NST
Sbjct: 384 VDKGLNST 391


>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 2   VPKGMNST 9
           V KG+NST
Sbjct: 384 VDKGLNST 391


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 3   PKGMNSTE 10
           P G+NS E
Sbjct: 609 PNGVNSQE 616


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 1    YVPKGMN 7
            ++P+G+N
Sbjct: 1124 HIPEGLN 1130




51|Sequence|251|260|MNSTESNSSA

>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 1   MNSTESNSS 9
           MNS E+N S
Sbjct: 268 MNSFENNES 276


>sp|SPIKE_ADE1P|FIBER protein|Human adenovirus B serotype 11

Query: 1   MNSTESN 7
           MNS+ESN
Sbjct: 148 MNSSESN 154




52|Sequence|256|265|SNSSASVRPK

>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   SNSSASVRP 9
           +NSSAS+ P
Sbjct: 305 NNSSASIPP 313




53|Sequence|261|270|SVRPKVLSSI

>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus

Query: 2   VRPKVLSSI 10
           +RPK+LS I
Sbjct: 853 IRPKILSMI 861


>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate

Query: 2   VRPKVLSSI 10
           +RPK+LS I
Sbjct: 853 IRPKILSMI 861


>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)

Query: 2   VRPKVLSSI 10
           +RPK+LS I
Sbjct: 852 IRPKILSMI 860


>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)

Query: 2   VRPKVLSSI 10
           +RPK+LS I
Sbjct: 852 IRPKILSMI 860


>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)

Query: 1   SVRPKVLSS 9
           S+ PK LSS
Sbjct: 766 SISPKCLSS 774


>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P

Query: 2   VRPKVLSS 9
           +RPKVL++
Sbjct: 485 MRPKVLTA 492


>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5

Query: 2   VRPKVLSS 9
           V P+VLSS
Sbjct: 561 VSPRVLSS 568


>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2

Query: 2   VRPKVLSS 9
           V P+VLSS
Sbjct: 561 VSPRVLSS 568


>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12

Query: 2   VRPKVLSS 9
           V P+VLSS
Sbjct: 487 VSPRVLSS 494




54|Sequence|266|275|VLSSIQEGTV

>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 1    VLSSIQEGT 9
            V+SS+ EGT
Sbjct: 1333 VISSVYEGT 1341


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 1    VLSSIQEGT 9
            V+SS+ EGT
Sbjct: 1333 VISSVYEGT 1341


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 2    LSSIQEGTV 10
            LSSI  GTV
Sbjct: 1320 LSSIYAGTV 1328


>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate

Query: 4  SIQEGTV 10
          S+QEGT+
Sbjct: 81 SVQEGTL 87


>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United

Query: 4  SIQEGTV 10
          S+QEGT+
Sbjct: 81 SVQEGTL 87




55|Sequence|271|280|QEGTVPDNTS

>sp|VE7_HPV41|PROTEIN E7|Human papillomavirus type 41

Query: 1  QEGTVPDNTS 10
          Q+G VP+N +
Sbjct: 15 QQGEVPENAA 24


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 1   QEGTVPD 7
           Q GT+PD
Sbjct: 460 QHGTMPD 466


>sp|VL2_HPV60|MINOR capsid protein L2|Human papillomavirus type 60

Query: 2   EGTVPDN 8
           EG +PDN
Sbjct: 419 EGLIPDN 425


>sp|TRX2_HHV8P|TRIPLEX capsid protein 2|Human herpesvirus 8 type P

Query: 2   EGTVPDNTS 10
           EG VPD  +
Sbjct: 242 EGVVPDEVT 250


>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)

Query: 1  QEGTVPDNT 9
          +EGT+P  T
Sbjct: 22 EEGTIPPTT 30


>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)

Query: 2   EGTVPD 7
           EGT PD
Sbjct: 539 EGTAPD 544


>sp|NS2A_CVHOC|NON-STRUCTURAL protein 2a|Human coronavirus OC43 (HCoV-OC43)

Query: 1   QEGTVPDN 8
           +EG +P+N
Sbjct: 220 EEGDLPEN 227


>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)

Query: 2   EGTVPD 7
           EGT PD
Sbjct: 536 EGTAPD 541


>sp|UL92_HHV7J|PROTEIN U63|Human herpesvirus 7 (strain JI)

Query: 2   EGTVPDN 8
           EGT+ DN
Sbjct: 177 EGTIYDN 183


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 2    EGTVPDNT 9
            EG +P NT
Sbjct: 1619 EGVLPINT 1626


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 2    EGTVPDNT 9
            EG +P NT
Sbjct: 1619 EGVLPINT 1626


>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)

Query: 5  VPDNTS 10
          VPDN+S
Sbjct: 32 VPDNSS 37


>sp|NEF_HV2SB|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 1   QEGTVPD 7
           +EG +PD
Sbjct: 149 EEGIIPD 155


>sp|NEF_HV2BE|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 1   QEGTVPD 7
           +EG +PD
Sbjct: 149 EEGIIPD 155


>sp|NEF_HV2G1|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 1   QEGTVPD 7
           +EG +PD
Sbjct: 148 EEGIIPD 154


>sp|NEF_HV2D1|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 1   QEGTVPD 7
           +EG +PD
Sbjct: 149 EEGIIPD 155




56|Sequence|276|285|PDNTSSARGK

>sp|DPOL_VARV|DNA polymerase|Variola virus

Query: 2   DNTSSARGK 10
           D+T+ A+GK
Sbjct: 373 DDTTDAKGK 381


>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2   DNTSSARGK 10
           D+T+ A+GK
Sbjct: 373 DDTTDAKGK 381


>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)

Query: 2   DNTSSARGK 10
           D+T+ A+GK
Sbjct: 373 DDTTDAKGK 381


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 2    DNTSSARG 9
            DN ++ARG
Sbjct: 1987 DNITTARG 1994


>sp|IR10_HCMVA|PROTEIN IRL10|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  PDNTSSARG 9
          P+NTSS  G
Sbjct: 47 PNNTSSNTG 55


>sp|GN_HHV2H|ENVELOPE glycoprotein N|Human herpesvirus 2 (strain HG52)

Query: 1  PDNTSSARG 9
          P N + ARG
Sbjct: 27 PPNAAGARG 35


>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973

Query: 1   PDNTSSARGK 10
           PD  S  RGK
Sbjct: 263 PDRASFLRGK 272


>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New

Query: 1   PDNTSSARGK 10
           PD  S  RGK
Sbjct: 263 PDRASFLRGK 272


>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao

Query: 1   PDNTSSARGK 10
           PD  S  RGK
Sbjct: 263 PDRASFLRGK 272


>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973

Query: 1   PDNTSSARGK 10
           PD  S  RGK
Sbjct: 263 PDRASFLRGK 272


>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972

Query: 1   PDNTSSARGK 10
           PD  S  RGK
Sbjct: 263 PDRASFLRGK 272


>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963

Query: 1   PDNTSSARGK 10
           PD  S  RGK
Sbjct: 263 PDRASFLRGK 272


>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956

Query: 1   PDNTSSARGK 10
           PD  S  RGK
Sbjct: 263 PDRASFLRGK 272


>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964

Query: 1   PDNTSSARGK 10
           PD  S  RGK
Sbjct: 263 PDRASFLRGK 272


>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964

Query: 1   PDNTSSARGK 10
           PD  S  RGK
Sbjct: 263 PDRASFLRGK 272


>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966

Query: 1   PDNTSSARGK 10
           PD  S  RGK
Sbjct: 263 PDRASFLRGK 272


>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   NTSSARGK 10
           NT+S RG+
Sbjct: 294 NTNSIRGQ 301


>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   NTSSARGK 10
           NT+S RG+
Sbjct: 294 NTNSIRGQ 301




57|Sequence|281|290|SARGKEDVNK

>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 1  SARGKEDVNK 10
          + RG+ED+NK
Sbjct: 57 TKRGEEDLNK 66


>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)

Query: 3  RGKEDVNK 10
          RG+ED+NK
Sbjct: 59 RGEEDLNK 66




58|Sequence|286|295|EDVNKTLPNL

>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H

Query: 1  EDVNKTLPNL 10
          ED+N  LPN+
Sbjct: 39 EDLNLQLPNV 48


>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H

Query: 1  EDVNKTLPNL 10
          ED+N  LPN+
Sbjct: 39 EDLNLQLPNV 48


>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H

Query: 1  EDVNKTLPNL 10
          ED+N  LPN+
Sbjct: 39 EDLNLQLPNV 48


>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2

Query: 1  EDVNKTLPNL 10
          ED+N  LPN+
Sbjct: 39 EDLNLQLPNV 48


>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2

Query: 1  EDVNKTLPNL 10
          ED+N  LPN+
Sbjct: 39 EDLNLQLPNV 48


>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1

Query: 1  EDVNKTLPNL 10
          ED+N  LPN+
Sbjct: 39 EDLNLQLPNV 48


>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1

Query: 1  EDVNKTLPNL 10
          ED+N  LPN+
Sbjct: 39 EDLNLQLPNV 48


>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E

Query: 1  EDVNKTLPNL 10
          ED+N  LPN+
Sbjct: 39 EDLNLQLPNV 48


>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E

Query: 1  EDVNKTLPNL 10
          ED+N  LPN+
Sbjct: 39 EDLNLQLPNV 48


>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E

Query: 1  EDVNKTLPNL 10
          ED+N  LPN+
Sbjct: 39 EDLNLQLPNV 48


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 1  EDVNKTLPNL 10
          ED+N  LPN+
Sbjct: 39 EDLNLQLPNV 48


>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)

Query: 2    DVNKTLPNL 10
            DVNKTL  L
Sbjct: 1035 DVNKTLQEL 1043


>sp|PHOSP_PIV5|PHOSPHOPROTEIN virus 5 (strain W3)

Query: 1   EDVNKTLPN 9
           EDV KTL N
Sbjct: 288 EDVRKTLSN 296


>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 1   EDVNKTLPN 9
           ED++ T+PN
Sbjct: 780 EDIHPTVPN 788


>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 1   EDVNKTLPN 9
           ED++ T+PN
Sbjct: 780 EDIHPTVPN 788


>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 1   EDVNKTLPN 9
           ED++ T+PN
Sbjct: 780 EDIHPTVPN 788


>sp|PG191_VACCC|PROTEIN OPG191|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  EDVNKTLPN 9
          +D+ +T+PN
Sbjct: 52 DDIVRTMPN 60


>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   EDVNKTLPNL 10
           ED  KT+P+L
Sbjct: 283 EDCEKTVPHL 292


>sp|PG067_VARV|PROTEIN OPG067|Variola virus

Query: 1   EDVNKTLPNL 10
           ED+  ++PN+
Sbjct: 103 EDITTSIPNI 112


>sp|PG067_VAR67|PROTEIN OPG067|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   EDVNKTLPNL 10
           ED+  ++PN+
Sbjct: 103 EDITTSIPNI 112


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 2   DVNKTLPNL 10
           DV+KT P L
Sbjct: 907 DVSKTYPTL 915


>sp|PG191_MONPV|PROTEIN OPG191|Monkeypox virus (MPXV)

Query: 1  EDVNKTLPN 9
          +D+ +T+PN
Sbjct: 52 DDIVRTMPN 60


>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)

Query: 2  DVNKTLPNL 10
          D NKT+P +
Sbjct: 27 DYNKTIPRI 35


>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)

Query: 2  DVNKTLPNL 10
          D NKT+P +
Sbjct: 27 DYNKTIPRI 35


>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)

Query: 2    DVNKTL 7
            DVNKTL
Sbjct: 1216 DVNKTL 1221


>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2

Query: 2  DVNKTLPNL 10
          D+N  LPN+
Sbjct: 40 DLNLQLPNV 48


>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3

Query: 1   EDVNKTLP 8
            +VNKT+P
Sbjct: 219 REVNKTIP 226


>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1

Query: 1   EDVNKTLP 8
            +VNKT+P
Sbjct: 219 REVNKTIP 226


>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G

Query: 1  EDVNKTLPNL 10
          ED++  LPN+
Sbjct: 39 EDLHLQLPNV 48


>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G

Query: 1  EDVNKTLPNL 10
          ED++  LPN+
Sbjct: 39 EDLHLQLPNV 48


>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1   EDVNKTLP 8
            +VNKT+P
Sbjct: 219 REVNKTIP 226


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 4    NKTLPNL 10
            N+TLP L
Sbjct: 5931 NQTLPRL 5937


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 4    NKTLPNL 10
            N+TLP L
Sbjct: 5981 NQTLPRL 5987


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1    EDVNKTLPNL 10
            ED N+TL  L
Sbjct: 1188 EDTNETLTEL 1197


>sp|PG067_MONPV|PROTEIN OPG067|Monkeypox virus (MPXV)

Query: 1  EDVNKTLPN 9
          ED+  ++PN
Sbjct: 72 EDIAPSIPN 80


>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)

Query: 2   DVNKTLP 8
           + NKTLP
Sbjct: 687 EANKTLP 693


>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 3   VNKTLPN 9
           V+KTLP+
Sbjct: 631 VDKTLPD 637


>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)

Query: 3   VNKTLPN 9
           V+KTLP+
Sbjct: 631 VDKTLPD 637


>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 3   VNKTLPN 9
           V+KTLP+
Sbjct: 631 VDKTLPD 637


>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)

Query: 3   VNKTLPN 9
           V+KTLP+
Sbjct: 631 VDKTLPD 637




59|Sequence|291|300|TLPNLQVVNH

>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)

Query: 4  NLQVVNH 10
          N+Q VNH
Sbjct: 59 NVQAVNH 65


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 4    NLQVVNH 10
            NLQ+ NH
Sbjct: 1055 NLQLTNH 1061


>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)

Query: 2   LPNLQVVN 9
           +PNL +VN
Sbjct: 566 VPNLTIVN 573


>sp|VE6_HPV43|PROTEIN E6|Human papillomavirus 43

Query: 1  TLPNLQV 7
          TLP LQ+
Sbjct: 23 TLPTLQI 29


>sp|VE6_HPV40|PROTEIN E6|Human papillomavirus 40

Query: 1  TLPNLQV 7
          TLP LQ+
Sbjct: 22 TLPTLQI 28


>sp|VE6_HPV07|PROTEIN E6|Human papillomavirus 7

Query: 1  TLPNLQV 7
          TLP LQ+
Sbjct: 22 TLPTLQI 28


>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69

Query: 4  NLQVVNH 10
          N+Q +NH
Sbjct: 50 NMQCINH 56


>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26

Query: 4  NLQVVNH 10
          N+Q +NH
Sbjct: 50 NMQCINH 56


>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)

Query: 1   TLPNLQVVN 9
           TLPNL+ ++
Sbjct: 190 TLPNLEFIS 198


>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)

Query: 4   NLQVVNH 10
           N QV NH
Sbjct: 543 NFQVTNH 549


>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)

Query: 1  TLPNLQVVNH 10
          +LP+  ++NH
Sbjct: 78 SLPSATMLNH 87


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 3    PNLQVVN 9
            P L+VVN
Sbjct: 1817 PGLEVVN 1823


>sp|VE2_HPV51|REGULATORY protein E2|Human papillomavirus 51

Query: 4  NLQVVNH 10
          NL+ +NH
Sbjct: 50 NLRTINH 56


>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 2   LPNLQV 7
           LPNL+V
Sbjct: 266 LPNLEV 271


>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)

Query: 2   LPNLQVVN 9
           LPN+Q V+
Sbjct: 334 LPNVQFVD 341


>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)

Query: 2   LPNLQVVN 9
           LPN+Q V+
Sbjct: 334 LPNVQFVD 341


>sp|U22_HHV6Z|PROTEIN U22|Human herpesvirus 6B (strain Z29)

Query: 2  LPNLQVVNH 10
          +P+L ++N+
Sbjct: 19 IPSLHIINN 27


>sp|US29_HCMVM|UNCHARACTERIZED protein US29|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   TLPNLQVVNH 10
           T PN  +VN+
Sbjct: 418 TAPNCGIVNN 427


>sp|US29_HCMVA|UNCHARACTERIZED protein HHRF4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   TLPNLQVVNH 10
           T PN  +VN+
Sbjct: 418 TAPNCGIVNN 427


>sp|TAT_HV192|PROTEIN Tat|Human immunodeficiency virus type 1

Query: 3  PNLQVVNH 10
          PNL+  NH
Sbjct: 6  PNLEPWNH 13


>sp|TAT_HV1ET|PROTEIN Tat|Human immunodeficiency virus type 1

Query: 3  PNLQVVNH 10
          PNL+  NH
Sbjct: 6  PNLEPWNH 13


>sp|TAT_HV1SE|PROTEIN Tat|Human immunodeficiency virus type 1

Query: 3  PNLQVVNH 10
          PNL+  NH
Sbjct: 6  PNLEPWNH 13




60|Sequence|296|305|QVVNHQQGPH

>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    VVNHQQGPH 10
            V NH +G H
Sbjct: 3044 VTNHMEGEH 3052


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    VVNHQQGPH 10
            V NH +G H
Sbjct: 3044 VTNHMEGEH 3052


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 2    VVNHQQGPH 10
            V NH +G H
Sbjct: 3044 VTNHMEGEH 3052


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    VVNHQQGPH 10
            V NH +G H
Sbjct: 3044 VTNHMEGEH 3052


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    VVNHQQGPH 10
            V NH +G H
Sbjct: 3044 VTNHMEGEH 3052


>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4   NHQQGPH 10
           NH Q PH
Sbjct: 930 NHAQFPH 936


>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4   NHQQGPH 10
           NH Q PH
Sbjct: 930 NHAQFPH 936


>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus

Query: 3   VNHQQGP 9
           +NH  GP
Sbjct: 679 INHNSGP 685


>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate

Query: 3   VNHQQGP 9
           +NH  GP
Sbjct: 679 INHNSGP 685


>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)

Query: 3   VNHQQGP 9
           +NH  GP
Sbjct: 679 INHNSGP 685


>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)

Query: 3   VNHQQGP 9
           +NH  GP
Sbjct: 679 INHNSGP 685


>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /

Query: 3   VNHQQGP 9
           +NH  GP
Sbjct: 679 INHNSGP 685


>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)

Query: 3   VNHQQGP 9
           +NH  GP
Sbjct: 679 INHNSGP 685


>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)

Query: 3   VNHQQGP 9
           +NH  GP
Sbjct: 679 INHNSGP 685


>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   VNHQQGP 9
           +NH  GP
Sbjct: 679 INHNSGP 685


>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 3   VNHQQGP 9
           +NH  GP
Sbjct: 671 INHNSGP 677


>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus

Query: 1   QVVNHQQGPH 10
           +VV H + PH
Sbjct: 420 RVVKHWEHPH 429


>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1

Query: 1   QVVNHQQG 8
           +++NHQ G
Sbjct: 466 RIINHQHG 473


>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D

Query: 1   QVVNHQQG 8
           +++NHQ G
Sbjct: 455 RIINHQHG 462


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 1   QVVNHQQG 8
           +++NHQ G
Sbjct: 466 RIINHQHG 473


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    VVNHQQGPH 10
            + NH  G H
Sbjct: 3044 ITNHMAGEH 3052


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    VVNHQQGPH 10
            + NH  G H
Sbjct: 3041 ITNHMAGEH 3049


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 1   QVVNHQQG 8
           +++NHQ G
Sbjct: 465 RIINHQHG 472


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 1   QVVNHQQG 8
           +++NHQ G
Sbjct: 466 RIINHQHG 473


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 1   QVVNHQQG 8
           +++NHQ G
Sbjct: 455 RIINHQHG 462


>sp|VE7_HPV70|PROTEIN E7|Human papillomavirus type 70

Query: 2  VVNHQQ 7
          VVNHQQ
Sbjct: 45 VVNHQQ 50


>sp|IORF_CVHOC|PROTEIN I|Human coronavirus OC43 (HCoV-OC43)

Query: 4  NHQQG 8
          NHQ+G
Sbjct: 33 NHQEG 37


>sp|CAHH_VARV|CELL surface-binding protein OPG105|Variola virus

Query: 4   NHQQGPH 10
           NH+  PH
Sbjct: 207 NHEGKPH 213


>sp|CAHH_VAR67|CELL surface-binding protein OPG105|Variola virus (isolate

Query: 4   NHQQGPH 10
           NH+  PH
Sbjct: 207 NHEGKPH 213


>sp|CAHH_MONPZ|CELL surface-binding protein OPG105|Monkeypox virus (strain

Query: 4   NHQQGPH 10
           NH+  PH
Sbjct: 207 NHEGKPH 213


>sp|CAHH_MONPV|CELL surface-binding protein OPG105|Monkeypox virus (MPXV)

Query: 4   NHQQGPH 10
           NH+  PH
Sbjct: 207 NHEGKPH 213


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 1    QVVNHQQG 8
            Q+VN +QG
Sbjct: 1958 QLVNFEQG 1965


>sp|MB43_HHV2H|MEMBRANE protein UL43|Human herpesvirus 2 (strain HG52)

Query: 1   QVVNH 5
           QVVNH
Sbjct: 334 QVVNH 338


>sp|CAHH_VACCT|CELL surface-binding protein OPG105|Vaccinia virus (strain Tian Tan)

Query: 4   NHQQGPH 10
           NH+  PH
Sbjct: 207 NHEGKPH 213


>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66

Query: 2  VVNHQQGP 9
          V+NHQ  P
Sbjct: 53 VLNHQMVP 60


>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)

Query: 4    NHQQGPH 10
            +H Q PH
Sbjct: 3049 DHLQSPH 3055


>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E

Query: 1   QVVNHQQG 8
           +++NHQ G
Sbjct: 465 RIINHQYG 472


>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E

Query: 1   QVVNHQQG 8
           +++NHQ G
Sbjct: 465 RIINHQYG 472




61|Sequence|301|310|QQGPHHRHIL

>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 2   QGPHHRHIL 10
           QGP  RH L
Sbjct: 719 QGPQDRHAL 727


>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind

Query: 4   PHHRHIL 10
           P HRHI+
Sbjct: 467 PTHRHII 473


>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain

Query: 4   PHHRHI 9
           P HRHI
Sbjct: 459 PTHRHI 464


>sp|TRX2_HHV7M|TRIPLEX capsid protein 2|Human herpesvirus 7 (strain MUK)

Query: 4  PHHRHIL 10
          P HRH++
Sbjct: 31 PSHRHLI 37


>sp|TRX2_HHV7J|TRIPLEX capsid protein 2|Human herpesvirus 7 (strain JI)

Query: 4  PHHRHIL 10
          P HRH++
Sbjct: 31 PSHRHLI 37


>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain

Query: 4   PHHRHI 9
           P HRHI
Sbjct: 459 PTHRHI 464


>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn

Query: 4   PHHRHI 9
           P HRHI
Sbjct: 445 PTHRHI 450


>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)

Query: 4   PHHRHIL 10
           P HRHI+
Sbjct: 452 PTHRHIV 458


>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra

Query: 4   PHHRHIL 10
           P HRHI+
Sbjct: 453 PTHRHIV 459


>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate

Query: 4   PHHRHI 9
           P HRHI
Sbjct: 444 PTHRHI 449


>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate

Query: 4   PHHRHI 9
           P HRHI
Sbjct: 439 PTHRHI 444


>sp|HEMA_CVHN5|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N5)

Query: 4   PHHR 7
           PHHR
Sbjct: 101 PHHR 104


>sp|HEMA_CVHN2|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N2)

Query: 4   PHHR 7
           PHHR
Sbjct: 101 PHHR 104


>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate

Query: 4   PHHRHI 9
           P HRHI
Sbjct: 448 PTHRHI 453


>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain

Query: 5  HHRHIL 10
          H RHIL
Sbjct: 53 HKRHIL 58


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 1   QQGPHHRHI 9
           Q  P H HI
Sbjct: 407 QDHPFHEHI 415


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 4    PHHRHIL 10
            PH RH +
Sbjct: 1563 PHGRHTM 1569


>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1   QQGPH 5
           +QGPH
Sbjct: 275 EQGPH 279


>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV

Query: 1   QQGPHHRHIL 10
           +Q  H++H+L
Sbjct: 539 KQKMHNKHVL 548


>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)

Query: 4   PHHRHI 9
           P HRH+
Sbjct: 456 PTHRHL 461


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 5    HHRHI 9
            HH+H+
Sbjct: 3138 HHQHV 3142


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 5    HHRHI 9
            HH+H+
Sbjct: 3138 HHQHV 3142


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 5    HHRHI 9
            HH+H+
Sbjct: 3138 HHQHV 3142


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 5    HHRHI 9
            HH+H+
Sbjct: 3138 HHQHV 3142


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 5    HHRHI 9
            HH+H+
Sbjct: 3138 HHQHV 3142


>sp|U17_HHV6Z|PROTEIN U17|Human herpesvirus 6B (strain Z29)

Query: 4   PHHRHIL 10
           P+H H++
Sbjct: 230 PYHGHVI 236


>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4   PHHRH 8
           PHH H
Sbjct: 532 PHHPH 536


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 1    QQGPHHRHIL 10
            +QG  H H L
Sbjct: 2205 RQGKQHLHSL 2214


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 5    HHRHI 9
            HH H+
Sbjct: 3138 HHHHV 3142


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1    QQGPHHRHIL 10
            +QG  H H L
Sbjct: 2205 RQGKQHLHSL 2214


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1    QQGPHHRHIL 10
            +QG  H H L
Sbjct: 2205 RQGKQHLHSL 2214


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1    QQGPHHRHIL 10
            +QG  H H L
Sbjct: 2205 RQGKQHLHSL 2214




62|Sequence|306|315|HRHILKLLPS

>sp|TEG7_HCMVM|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain Merlin)

Query: 3  HILKLLP 9
          H+LKLLP
Sbjct: 67 HLLKLLP 73


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 1    HRHILKLL 8
             RH+LKL+
Sbjct: 1760 QRHVLKLM 1767


>sp|TEG7_HCMVA|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3  HILKLLP 9
          H+LKLLP
Sbjct: 67 HLLKLLP 73


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 1    HRHILKLL 8
             RH+LK+L
Sbjct: 1759 QRHVLKIL 1766


>sp|DUT_HHV7J|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 7 (strain JI)

Query: 4   ILKLLPS 10
           ILKLLP+
Sbjct: 351 ILKLLPN 357


>sp|UL24_HHV2H|PROTEIN UL24|Human herpesvirus 2 (strain HG52)

Query: 2   RHILKLLPS 10
           RH LKLL S
Sbjct: 137 RHSLKLLQS 145


>sp|UL24_HHV11|PROTEIN UL24|Human herpesvirus 1 (strain 17)

Query: 2   RHILKLLPS 10
           RH LKLL S
Sbjct: 126 RHSLKLLQS 134


>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   RHILKLLP 9
           R+I K+LP
Sbjct: 754 RYIYKVLP 761


Query: 2   RHILKLL 8
           RHI KL+
Sbjct: 888 RHICKLI 894


>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   RHILKLLP 9
           R+I K+LP
Sbjct: 753 RYIYKVLP 760


>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   RHILKLLP 9
           R+I K+LP
Sbjct: 752 RYIYKVLP 759


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   RHILKLLP 9
           R+I K+LP
Sbjct: 755 RYIYKVLP 762


>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   RHILKLLP 9
           R+I K+LP
Sbjct: 753 RYIYKVLP 760


Query: 2   RHILKLL 8
           RHI KL+
Sbjct: 887 RHICKLI 893


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   RHILKLLP 9
           R+I K+LP
Sbjct: 754 RYIYKVLP 761


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   RHILKLLP 9
           R+I K+LP
Sbjct: 754 RYIYKVLP 761


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   RHILKLLP 9
           R+I K+LP
Sbjct: 754 RYIYKVLP 761


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   RHILKLLP 9
           R+I K+LP
Sbjct: 755 RYIYKVLP 762


>sp|UL76_HCMVA|PROTEIN UL76|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  HRHILKLLPS 10
          +R +L++ PS
Sbjct: 35 YRRLLRVFPS 44


>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   RHILKLL 8
           RHI KL+
Sbjct: 886 RHICKLI 892


>sp|UL76_HCMVM|PROTEIN UL76|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  HRHILKLLPS 10
          +R +L++ PS
Sbjct: 35 YRRLLRVFPS 44


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 4   ILKLLPS 10
           ILKLLP 
Sbjct: 94  ILKLLPD 100




63|Sequence|311|320|KLLPSMEATG

>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 4   PSMEATG 10
           PSME TG
Sbjct: 643 PSMETTG 649


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 4   PSMEATG 10
           PSME TG
Sbjct: 643 PSMETTG 649


>sp|TRM2_HHV6U|TRIPARTITE terminase subunit 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 2  LLPSMEA 8
          +LPS+EA
Sbjct: 40 MLPSLEA 46


>sp|TRM2_HHV6Z|TRIPARTITE terminase subunit 2|Human herpesvirus 6B (strain Z29)

Query: 2  LLPSMEA 8
          +LPS+EA
Sbjct: 40 MLPSLEA 46


>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)

Query: 2   LLPSMEATG 10
            LPS+  TG
Sbjct: 202 FLPSLTCTG 210


>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   LLPSMEATG 10
            LPS+  TG
Sbjct: 202 FLPSLTCTG 210


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 3   LPSMEATG 10
           LP+ EA+G
Sbjct: 606 LPNTEASG 613


>sp|ORF3_MERS1|NON-STRUCTURAL protein ORF3|Middle East respiratory syndrome-related coronavirus

Query: 3  LPSMEATG 10
          +PS E+TG
Sbjct: 62 VPSAESTG 69


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 3   LPSMEATG 10
           LP+ EA+G
Sbjct: 606 LPNTEASG 613


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 4   PSMEAT 9
           PSM+AT
Sbjct: 962 PSMDAT 967




64|Sequence|316|325|MEATGGEKSS

>sp|NEF_HV1U4|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 2   EATGGEKSS 10
           EATGGE +S
Sbjct: 155 EATGGENNS 163


>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P

Query: 5   GGEKSS 10
           GGEKSS
Sbjct: 593 GGEKSS 598


>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 1    MEATGGEKS 9
            +E  GGE+S
Sbjct: 1713 LETLGGERS 1721


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1    MEATGGEKS 9
            +E  GG+KS
Sbjct: 1713 LETLGGDKS 1721


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1    MEATGGEKS 9
            +E  GG+KS
Sbjct: 1713 LETLGGDKS 1721


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1    MEATGGEKS 9
            +E  GG+KS
Sbjct: 1713 LETLGGDKS 1721


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1    MEATGGEKS 9
            +E  GG+KS
Sbjct: 1713 LETLGGDKS 1721


>sp|E4RF3_ADE02|EARLY 4 ORF3 protein|Human adenovirus C serotype 2

Query: 3   ATGGEK 8
           ATGGE+
Sbjct: 95  ATGGER 100


>sp|E411_ADE05|PROBABLE early E4 11 kDa|Human adenovirus C serotype 5

Query: 3   ATGGEK 8
           ATGGE+
Sbjct: 95  ATGGER 100


>sp|PHOSP_VSNJM|PHOSPHOPROTEIN stomatitis New Jersey virus

Query: 1   MEATGGEKS 9
           M+  GGEKS
Sbjct: 108 MKENGGEKS 116


>sp|PHOSP_VSNJO|PHOSPHOPROTEIN stomatitis New Jersey virus

Query: 1   MEATGGEKS 9
           M+  GGEKS
Sbjct: 108 MKENGGEKS 116


>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P

Query: 5  GGEKSS 10
          GGEK+S
Sbjct: 14 GGEKAS 19




65|Sequence|321|330|GEKSSTPIKG

>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain

Query: 1   GEKSSTPIKG 10
           G KSS  +KG
Sbjct: 642 GYKSSLDVKG 651


>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate

Query: 1   GEKSSTPIK 9
           G+K   PIK
Sbjct: 354 GDKEDQPIK 362


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1    GEKSSTPI 8
            GE SS P+
Sbjct: 2647 GESSSNPL 2654


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1    GEKSSTP 7
            GE S+TP
Sbjct: 2672 GESSATP 2678


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 1    GEKSSTP 7
            GE+ STP
Sbjct: 3410 GEEGSTP 3416




66|Sequence|326|335|TPIKGPKRGH

>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1    TPIKGPKRG 9
            TPI GPKRG
Sbjct: 2410 TPITGPKRG 2418


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 1    TPIKGPKRG 9
            TPI GPKRG
Sbjct: 2383 TPITGPKRG 2391


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 1    TPIKGPKRG 9
            TPI GPKRG
Sbjct: 2388 TPITGPKRG 2396


>sp|E321_ADE35|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 35

Query: 3  IKGPKRGH 10
          +KGP+ GH
Sbjct: 33 LKGPQGGH 40


>sp|E321_ADE1P|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 11

Query: 3  IKGPKRGH 10
          +KGP+ GH
Sbjct: 33 LKGPQGGH 40


>sp|E321_ADE1A|EARLY E3 20.2 kDa glycoprotein|Human adenovirus B serotype 11

Query: 3  IKGPKRGH 10
          +KGP+ GH
Sbjct: 33 LKGPQGGH 40


>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 1  TPIKGPKRG 9
          T  +GPKRG
Sbjct: 62 TYFQGPKRG 70


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 3    IKGPKRG 9
            IKGP+R 
Sbjct: 6607 IKGPQRA 6613


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 3    IKGPKRG 9
            IKGP+R 
Sbjct: 6627 IKGPQRA 6633


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 3    IKGPKRG 9
            IKGP+R 
Sbjct: 6657 IKGPQRA 6663


>sp|CFLA_MCV1|VIRAL CASP8 and FADD-like apoptosis|Molluscum contagiosum virus subtype 1

Query: 2   PIKGPKRGH 10
           P++  +RGH
Sbjct: 195 PVRTLRRGH 203


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    TPIKGPKRG 9
            TP KGP + 
Sbjct: 6581 TPSKGPAQA 6589


>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1  TPIKGPKRGH 10
          +P  GP R H
Sbjct: 13 SPTAGPLRSH 22


>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1  TPIKGPKRGH 10
          +P  GP R H
Sbjct: 13 SPTAGPLRSH 22


>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5   GPKRGH 10
           GP RGH
Sbjct: 461 GPSRGH 466


>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B

Query: 2   PIKGPKRGH 10
           PI GP+  H
Sbjct: 314 PILGPRGRH 322


>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A

Query: 2   PIKGPKRGH 10
           PI GP+  H
Sbjct: 314 PILGPRGRH 322


>sp|M2_I30A0|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 5  GPKRG 9
          GPKRG
Sbjct: 58 GPKRG 62


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 1    TPIKGPKR 8
            TPI  P+R
Sbjct: 1780 TPIAPPRR 1787


Query: 1    TPIKGPK 7
            T +KGPK
Sbjct: 2160 TKLKGPK 2166


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 1    TPIKGPKR 8
            TPI  P+R
Sbjct: 1780 TPIAPPRR 1787


Query: 1    TPIKGPK 7
            T +KGPK
Sbjct: 2160 TKLKGPK 2166


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 1    TPIKGPKR 8
            TPI  P+R
Sbjct: 1781 TPIAPPRR 1788


Query: 1    TPIKGPK 7
            T +KGPK
Sbjct: 2161 TKLKGPK 2167


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 2   PIKGPKR 8
           P++GP+R
Sbjct: 598 PLRGPER 604


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 2   PIKGPKR 8
           P++GP+R
Sbjct: 598 PLRGPER 604


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 2   PIKGPKR 8
           P++GP+R
Sbjct: 598 PLRGPER 604


>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)

Query: 4   KGPKRG 9
           +GPKRG
Sbjct: 387 RGPKRG 392


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 2   PIKGPKR 8
           P++GP+R
Sbjct: 598 PLRGPER 604


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 2   PIKGPKR 8
           P++GP+R
Sbjct: 598 PLRGPER 604


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 2   PIKGPKR 8
           P++GP+R
Sbjct: 598 PLRGPER 604


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 2   PIKGPKR 8
           P++GP+R
Sbjct: 598 PLRGPER 604


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 2   PIKGPKR 8
           P++GP+R
Sbjct: 598 PLRGPER 604


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 2   PIKGPKR 8
           P++GP+R
Sbjct: 598 PLRGPER 604


>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)

Query: 2   PIKGPKR 8
           P+K P R
Sbjct: 586 PVKAPSR 592


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 2   PIKGPKR 8
           P+K P R
Sbjct: 586 PVKAPSR 592


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 1    TPIKGPK 7
            T +KGPK
Sbjct: 2121 TKLKGPK 2127


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 1    TPIKGPK 7
            T +KGPK
Sbjct: 2121 TKLKGPK 2127


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 1    TPIKGPK 7
            T +KGPK
Sbjct: 2076 TKLKGPK 2082


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    TPIKGPK 7
            T +KGPK
Sbjct: 2149 TKLKGPK 2155


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1    TPIKGPK 7
            T +KGPK
Sbjct: 2121 TKLKGPK 2127


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 1    TPIKGPK 7
            T +KGPK
Sbjct: 2117 TKLKGPK 2123


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1    TPIKGPK 7
            T +KGPK
Sbjct: 2124 TKLKGPK 2130


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1    TPIKGPK 7
            T +KGPK
Sbjct: 2144 TKLKGPK 2150


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    TPIKGPK 7
            T +KGPK
Sbjct: 2135 TKLKGPK 2141


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    TPIKGPK 7
            T +KGPK
Sbjct: 2143 TKLKGPK 2149


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    TPIKGPK 7
            T +KGPK
Sbjct: 2143 TKLKGPK 2149




67|Sequence|331|340|PKRGHPRQNL

>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   PKRGHPRQNL 10
           P RGHP   L
Sbjct: 185 PSRGHPNHRL 194


>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P

Query: 1  PKRGHP 6
          P+RGHP
Sbjct: 43 PERGHP 48


>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996

Query: 3   RGHPRQN 9
           RG PR+N
Sbjct: 428 RGRPREN 434


>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)

Query: 1    PKRGHPR 7
            P+RGH +
Sbjct: 1130 PRRGHKK 1136


>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)

Query: 1   PKRGHPR 7
           P+RG PR
Sbjct: 363 PQRGAPR 369


>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 3    RGHPRQNL 10
            RG+P QNL
Sbjct: 1235 RGNPDQNL 1242


>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 3    RGHPRQNL 10
            RG+P QNL
Sbjct: 1235 RGNPDQNL 1242


>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 2  KRGHPRQNL 10
          KRG  R+NL
Sbjct: 5  KRGAKRENL 13


>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 2  KRGHPRQNL 10
          KRG  R+NL
Sbjct: 5  KRGAKRENL 13


>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 2  KRGHPRQNL 10
          KRG  R+NL
Sbjct: 5  KRGAKRENL 13


>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961

Query: 3   RGHPRQN 9
           RG P++N
Sbjct: 428 RGQPKEN 434


>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig

Query: 3   RGHPRQN 9
           RG P++N
Sbjct: 428 RGQPKEN 434


>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39

Query: 1   PKRGHPRQ 8
           P R  PRQ
Sbjct: 244 PSRKRPRQ 251


>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959

Query: 3   RGHPRQN 9
           RG P++N
Sbjct: 428 RGRPKEN 434


>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort

Query: 3   RGHPRQN 9
           RG P++N
Sbjct: 428 RGRPKEN 434


>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940

Query: 3   RGHPRQN 9
           RG P++N
Sbjct: 428 RGRPKEN 434


>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936

Query: 3   RGHPRQN 9
           RG P++N
Sbjct: 428 RGRPKEN 434


>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 1  PKRGHPRQNL 10
          P RG PR  +
Sbjct: 10 PTRGGPRNTV 19


>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United

Query: 2  KRGHPRQNL 10
          KRG  R+NL
Sbjct: 5  KRGVKRENL 13


>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain

Query: 2  KRGHPRQNL 10
          KRG  R+NL
Sbjct: 5  KRGVKRENL 13


>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57

Query: 1   PKRGH 5
           P+RGH
Sbjct: 292 PRRGH 296


>sp|VP1_POVBK|MAJOR capsid protein VP1|BK polyomavirus (BKPyV) (Human polyomavirus

Query: 1  PKRGHPRQNL 10
          P+ G P +NL
Sbjct: 54 PEMGDPDENL 63


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 1   PKRGHPR 7
           PK G PR
Sbjct: 727 PKSGFPR 733


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 1   PKRGH 5
           PK+GH
Sbjct: 638 PKQGH 642


>sp|US29_HCMVM|UNCHARACTERIZED protein US29|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   PKRGHPRQ 8
           PKR +PR+
Sbjct: 186 PKRTYPRR 193


>sp|US29_HCMVA|UNCHARACTERIZED protein HHRF4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   PKRGHPRQ 8
           PKR +PR+
Sbjct: 186 PKRTYPRR 193


>sp|RNB_HHV1M|RNA-BINDING protein|Human herpesvirus 1 (strain MP)

Query: 3  RGHPR 7
          RGHPR
Sbjct: 36 RGHPR 40




68|Sequence|336|345|PRQNLHKHFD

>sp|PG170_VAR67|PROTEIN OPG170|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   PRQNLHKHFD 10
           PR+ L K FD
Sbjct: 207 PRKILKKKFD 216


>sp|PG170_VACCC|PROTEIN OPG170|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   PRQNLHKHFD 10
           PR+ L K FD
Sbjct: 208 PRKILKKKFD 217


>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)

Query: 1   PRQNLH 6
           P+QN+H
Sbjct: 291 PKQNVH 296


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 3   QNLHKHF 9
           Q LH HF
Sbjct: 137 QELHNHF 143


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 3   QNLHKHF 9
           QN+H H+
Sbjct: 163 QNMHYHY 169


>sp|NEC2_HHV7J|NUCLEAR egress protein 2|Human herpesvirus 7 (strain JI)

Query: 2   RQNLHKH 8
           RQ+L KH
Sbjct: 172 RQDLEKH 178


>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   PRQNLHKH 8
           PR  LH H
Sbjct: 880 PRHPLHAH 887


>sp|US11_HCMVT|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain Towne)

Query: 5   LHKHF 9
           LH+HF
Sbjct: 203 LHRHF 207


>sp|US11_HCMVM|MEMBRANE glycoprotein US11|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5   LHKHF 9
           LH+HF
Sbjct: 203 LHRHF 207


>sp|US11_HCMVA|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain AD169)

Query: 5   LHKHF 9
           LH+HF
Sbjct: 203 LHRHF 207


>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12

Query: 1  PRQNLHKH 8
          PRQ  H+H
Sbjct: 8  PRQFHHQH 15


>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain

Query: 2   RQNLHKH 8
           R+N+HK+
Sbjct: 405 RKNIHKY 411


>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   RQNLHKHF 9
           RQ+LHK +
Sbjct: 397 RQHLHKDY 404


>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)

Query: 2   RQNLHKHF 9
           RQ+LHK +
Sbjct: 397 RQHLHKDY 404


>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)

Query: 3   QNLHKHF 9
           +NLH HF
Sbjct: 778 KNLHLHF 784


>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain

Query: 3   QNLHKHF 9
           +NLH HF
Sbjct: 778 KNLHLHF 784


>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)

Query: 3   QNLHKHF 9
           +NLH HF
Sbjct: 778 KNLHLHF 784


>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)

Query: 4   NLHKHF 9
           ++H+HF
Sbjct: 204 DIHRHF 209


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 6    HKHF 9
            HKHF
Sbjct: 3648 HKHF 3651


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 6    HKHF 9
            HKHF
Sbjct: 3668 HKHF 3671


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 6    HKHF 9
            HKHF
Sbjct: 3698 HKHF 3701


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 6    HKHF 9
            HKHF
Sbjct: 3648 HKHF 3651


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 6    HKHF 9
            HKHF
Sbjct: 3668 HKHF 3671


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 6    HKHF 9
            HKHF
Sbjct: 3698 HKHF 3701


>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)

Query: 4   NLHKHF 9
           ++H+HF
Sbjct: 204 DIHRHF 209


>sp|VE2_HPV24|REGULATORY protein E2|Human papillomavirus 24

Query: 3  QNLHKHFD 10
          +NL K FD
Sbjct: 2  ENLKKRFD 9




69|Sequence|341|350|HKHFDINEHL

>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1

Query: 1  HKHFDINEH 9
          HKH   +EH
Sbjct: 89 HKHLHAHEH 97


>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin

Query: 2   KHFDINEHL 10
           KH D+N+ L
Sbjct: 820 KHIDVNDCL 828


>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)

Query: 2   KHFDINEHL 10
           KH D+N+ L
Sbjct: 820 KHIDVNDCL 828


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 2    KHFDINE 8
            +HFD N+
Sbjct: 4559 RHFDCND 4565


>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain

Query: 2   KHFDINEHL 10
           +H+ ++EHL
Sbjct: 433 EHYGLSEHL 441


>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7

Query: 4   FDINEH 9
           FD NEH
Sbjct: 121 FDCNEH 126


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 2    KHFDINE 8
            KH+D N+
Sbjct: 2069 KHYDFNK 2075


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 3    HFDIN 7
            HFD+N
Sbjct: 1352 HFDMN 1356


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 3    HFDIN 7
            HFD+N
Sbjct: 1351 HFDMN 1355


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 3    HFDIN 7
            HFD+N
Sbjct: 1353 HFDMN 1357


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 3    HFDIN 7
            HFD+N
Sbjct: 1351 HFDMN 1355


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 3    HFDIN 7
            HFD+N
Sbjct: 1361 HFDMN 1365


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 3    HFDIN 7
            HFD+N
Sbjct: 1354 HFDMN 1358


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 3    HFDIN 7
            HFD+N
Sbjct: 1342 HFDMN 1346


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 3    HFDIN 7
            HFD+N
Sbjct: 1342 HFDMN 1346


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 3    HFDIN 7
            HFD+N
Sbjct: 1343 HFDMN 1347


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 3    HFDIN 7
            HFD+N
Sbjct: 1341 HFDMN 1345


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 3    HFDIN 7
            HFD+N
Sbjct: 1341 HFDMN 1345


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 3    HFDIN 7
            HFD+N
Sbjct: 1343 HFDMN 1347


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 3    HFDIN 7
            HFD+N
Sbjct: 1343 HFDMN 1347


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 3    HFDIN 7
            HFD+N
Sbjct: 1345 HFDMN 1349


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 3    HFDIN 7
            HFD+N
Sbjct: 1340 HFDMN 1344


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 3    HFDIN 7
            HFD+N
Sbjct: 1359 HFDMN 1363


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 3    HFDIN 7
            HFD+N
Sbjct: 1349 HFDMN 1353


>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1  HKHFDINEH 9
          + HF +NE 
Sbjct: 7  NSHFTLNEQ 15


>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   KHFDINEHL 10
           K FD  EH 
Sbjct: 583 KSFDFREHF 591


>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   KHFDINEHL 10
           K FD  EH 
Sbjct: 583 KSFDFREHF 591




70|Sequence|346|355|INEHLPWMIV

>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)

Query: 1   INEHLPWM 8
           +NEHLP M
Sbjct: 237 VNEHLPTM 244


>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)

Query: 2  NEHLPWMI 9
          N+HLP+ I
Sbjct: 30 NQHLPFRI 37


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 1    INEHLPWMIV 10
            +  H+ WM++
Sbjct: 1167 LGRHITWMVI 1176


>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)

Query: 1   INEHLPWMIV 10
           INE LP+ I+
Sbjct: 120 INELLPYKIL 129


>sp|US11_HCMVA|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain AD169)

Query: 1   INEHLPWM 8
           ++ H PWM
Sbjct: 203 LHRHFPWM 210


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 2    NEHLPWMIV 10
            NE+L W +V
Sbjct: 4105 NENLTWPLV 4113


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2    NEHLPWMIV 10
            NE+L W +V
Sbjct: 4105 NENLTWPLV 4113


>sp|VE2_HPV5B|REGULATORY protein E2|Human papillomavirus type 5b

Query: 4  HLPWMIV 10
          H PW +V
Sbjct: 89 HEPWTLV 95


>sp|VE2_HPV05|REGULATORY protein E2|Human papillomavirus 5

Query: 4  HLPWMIV 10
          H PW +V
Sbjct: 89 HEPWTLV 95


>sp|US11_HCMVM|MEMBRANE glycoprotein US11|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   INEHLPWM 8
           ++ H PWM
Sbjct: 203 LHRHFPWM 210


>sp|US11_HCMVT|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain Towne)

Query: 1   INEHLPWM 8
           ++ H PWM
Sbjct: 203 LHRHFPWM 210


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 3    EHLPWM 8
            +HL WM
Sbjct: 2124 QHLMWM 2129


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 3    EHLPWM 8
            +HL WM
Sbjct: 2115 QHLMWM 2120


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 3    EHLPWM 8
            +HL WM
Sbjct: 2116 QHLMWM 2121


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 4    HLPWMIV 10
            HL W+++
Sbjct: 3111 HLQWLVM 3117


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 4    HLPWMIV 10
            HL W+++
Sbjct: 3111 HLQWLVM 3117


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 3   EHLPWMIV 10
           EH  WM V
Sbjct: 434 EHQDWMRV 441


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 2    NEHLPWMI 9
            + HLP+++
Sbjct: 1716 SRHLPYLV 1723


>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human

Query: 2  NEHLPWMIV 10
          +EHL W ++
Sbjct: 30 DEHLLWSLL 38


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 4    HLPWMIV 10
            HL W+++
Sbjct: 3149 HLQWIVM 3155


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 4    HLPWMIV 10
            HL W+++
Sbjct: 3169 HLQWIVM 3175


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 4    HLPWMIV 10
            HL W+++
Sbjct: 3199 HLQWIVM 3205


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 4    HLPWMIV 10
            HL W+++
Sbjct: 3149 HLQWIVM 3155


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 4    HLPWMIV 10
            HL W+++
Sbjct: 3169 HLQWIVM 3175


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 4    HLPWMIV 10
            HL W+++
Sbjct: 3199 HLQWIVM 3205




71|Sequence|351|360|PWMIVLFLLL

>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)

Query: 2   WMIVLFLLL 10
           W+I+LFLLL
Sbjct: 722 WVILLFLLL 730


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2   WMIVLFLLL 10
           W+I+LFLLL
Sbjct: 722 WVILLFLLL 730


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 2   WMIVLFLLL 10
           W+++LFLLL
Sbjct: 722 WVVLLFLLL 730


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2   WMIVLFLLL 10
           W+++LFLLL
Sbjct: 722 WVVLLFLLL 730


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2   WMIVLFLLL 10
           W+++LFLLL
Sbjct: 722 WVVLLFLLL 730


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2   WMIVLFLLL 10
           W+++LFLLL
Sbjct: 722 WVVLLFLLL 730


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 2   WMIVLFLLL 10
           W+++LFLLL
Sbjct: 722 WVVLLFLLL 730


>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)

Query: 2   WMIVLFLLL 10
           W+++LFLLL
Sbjct: 722 WVVLLFLLL 730


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 2   WMIVLFLLL 10
           W+IVL +L 
Sbjct: 822 WLIVLLVLF 830


>sp|UL09_HCMVM|MEMBRANE glycoprotein UL9|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  PWMIVLF 7
          PW+ +LF
Sbjct: 9  PWITILF 15


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2   WMIVLFLLL 10
           ++++LFLLL
Sbjct: 718 YIVILFLLL 726


>sp|VSSGP_EBOZM|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Mayinga-76)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 22 WVIILF 27


>sp|VSSGP_EBOZ5|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Kikwit-95)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 22 WVIILF 27


>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 22 WVIILF 27


>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 22 WVIILF 27


>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 22 WVIILF 27


>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 22 WVIILF 27


>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 22 WVIILF 27


>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 22 WVIILF 27


>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 22 WVIILF 27


>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 23 WVIILF 28


>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 23 WVIILF 28


>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 23 WVIILF 28


>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 22 WVIILF 27


>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 22 WVIILF 27


>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 22 WVIILF 27


>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 22 WVIILF 27


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 2   WMIVL 6
           WMIVL
Sbjct: 969 WMIVL 973


>sp|VSGP_EBOG4|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 22 WVIILF 27


>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 22 WVIILF 27


>sp|VSGP_EBOZM|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 22 WVIILF 27


>sp|VSGP_EBOZ5|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 22 WVIILF 27


>sp|VSGP_EBOEC|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 22 WVIILF 27


>sp|VSGP_TAFVC|PRE-SMALL/SECRETED glycoprotein|Tai Forest ebolavirus (strain Cote

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 22 WVIILF 27


>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV

Query: 4   IVLFLLL 10
           IV+FLLL
Sbjct: 417 IVMFLLL 423


>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 23 WVIILF 28


>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 23 WVIILF 28


>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 23 WVIILF 28


>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 23 WVIILF 28


>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 2  WMIVLF 7
          W+I+LF
Sbjct: 23 WVIILF 28


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2   WMIVLFLLL 10
           ++++LFLLL
Sbjct: 718 YIVLLFLLL 726


>sp|DYR_HHV8P|PUTATIVE Dihydrofolate reductase|Human herpesvirus 8 type P

Query: 1   PWMIVLFL 8
           PW + LFL
Sbjct: 128 PWPVRLFL 135


>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65

Query: 2   WMIVLF 7
           W+IV+F
Sbjct: 188 WVIVIF 193


>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4

Query: 2   WMIVLF 7
           W+IV+F
Sbjct: 189 WVIVIF 194


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2   WMIVLFLLL 10
           ++++LFLLL
Sbjct: 718 YVVLLFLLL 726


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2   WMIVLFLLL 10
           ++++LFLLL
Sbjct: 718 YVVLLFLLL 726


>sp|UL139_HCMVM|MEMBRANE glycoprotein UL139|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2  WMIVLFLL 9
          W++VLF L
Sbjct: 3  WILVLFAL 10


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2   WMIVLFLLL 10
           ++++LFLLL
Sbjct: 718 YVVLLFLLL 726


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2   WMIVLFLLL 10
           ++++LFLLL
Sbjct: 718 YVVLLFLLL 726


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2   WMIVLFLLL 10
           ++++LFLLL
Sbjct: 718 YVVLLFLLL 726


>sp|GN_HHV2H|ENVELOPE glycoprotein N|Human herpesvirus 2 (strain HG52)

Query: 2  WMIVLFLLL 10
          W+++LF+ L
Sbjct: 11 WVVLLFVAL 19


>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)

Query: 2  WMIVLFL 8
          W I LFL
Sbjct: 11 WSIYLFL 17


>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)

Query: 2   WMIVLFLLL 10
           ++++LFLLL
Sbjct: 718 YVVLLFLLL 726


>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2  WMIVLFLL 9
          W + LF+L
Sbjct: 5  WCLTLFVL 12


>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2  WMIVLFLL 9
          W + LF+L
Sbjct: 5  WCLTLFVL 12




72|Sequence|356|365|LFLLLVLVVI

>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2   FLLLVLVV 9
           FLLLVL +
Sbjct: 800 FLLLVLAL 807


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2   FLLLVLVV 9
           FLLLVL +
Sbjct: 800 FLLLVLAL 807




73|Sequence|361|370|VLVVIVVCSI

>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1    VLVVIVVCSI 10
            ++VVI +C+I
Sbjct: 1160 LVVVITLCAI 1169


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1    VLVVIVVCSI 10
            ++VVI +C+I
Sbjct: 1160 LVVVITLCAI 1169


>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)

Query: 1   VLVVIVVCSI 10
           V  VIV+C +
Sbjct: 684 VYTVIVLCGV 693


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 2   LVVIVVCSI 10
           LV+I VC +
Sbjct: 290 LVIIPVCQL 298


>sp|PG097_VARV|PROTEIN OPG097|Variola virus

Query: 1   VLVVIVVC 8
           +LVV+ +C
Sbjct: 204 ILVVLSIC 211


>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   VLVVIVVC 8
           +LVV+ +C
Sbjct: 204 ILVVLSIC 211


>sp|PG097_VACCC|PROTEIN OPG097|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   VLVVIVVC 8
           +LVV+ +C
Sbjct: 205 ILVVLSIC 212


>sp|PG097_MONPV|PROTEIN OPG097|Monkeypox virus (MPXV)

Query: 1   VLVVIVVC 8
           +LVV+ +C
Sbjct: 199 ILVVLSIC 206




74|Sequence|366|375|VVCSIRKSSR

>sp|PG053_VARV|EFC-ASSOCIATED protein OPG053|Variola virus

Query: 2   VCSIRKS 8
           +CSIR++
Sbjct: 193 ICSIRRN 199


>sp|PG053_VAR67|EFC-ASSOCIATED protein OPG053|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2   VCSIRKS 8
           +CSIR++
Sbjct: 193 ICSIRRN 199


>sp|PG053_VACCP|EFC-ASSOCIATED protein OPG053|Vaccinia virus (strain L-IVP) (VACV)

Query: 2   VCSIRKS 8
           +CSIR++
Sbjct: 193 ICSIRRN 199


>sp|PG053_VACCC|EFC-ASSOCIATED protein OPG053|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   VCSIRKS 8
           +CSIR++
Sbjct: 193 ICSIRRN 199


>sp|PG053_MONPV|EFC-ASSOCIATED protein OPG053|Monkeypox virus (MPXV)

Query: 2   VCSIRKS 8
           +CSIR++
Sbjct: 193 ICSIRRN 199


>sp|MB43_VZVO|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2   VCSIRKSSR 10
           VC  R+SSR
Sbjct: 245 VCDHRESSR 253


>sp|MB43_VZVD|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   VCSIRKSSR 10
           VC  R+SSR
Sbjct: 245 VCDHRESSR 253




75|Sequence|371|380|RKSSRTLKKG

>sp|MB43_VZVO|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1   RKSSRTLKK 9
           R+SSRTLK+
Sbjct: 249 RESSRTLKR 257


>sp|MB43_VZVD|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   RKSSRTLKK 9
           R+SSRTLK+
Sbjct: 249 RESSRTLKR 257


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1    RKSSRTLKKG 10
            R S RTLK G
Sbjct: 3064 RHSFRTLKSG 3073


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1    RKSSRTLKKG 10
            R S RTLK G
Sbjct: 3064 RHSFRTLKSG 3073


>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22

Query: 1   RKSSRTLKK 9
           RK+S+T+K+
Sbjct: 497 RKTSKTVKR 505


>sp|NEC2_HHV6U|NUCLEAR egress protein 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   RKSSRTLKKG 10
           R+SS  L+KG
Sbjct: 189 RRSSHVLEKG 198


>sp|NEC2_HHV6Z|NUCLEAR egress protein 2|Human herpesvirus 6B (strain Z29)

Query: 1   RKSSRTLKKG 10
           R+SS  L+KG
Sbjct: 189 RRSSHVLEKG 198


>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)

Query: 5   RTLKKG 10
           RTL+KG
Sbjct: 405 RTLRKG 410


>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)

Query: 5   RTLKKG 10
           RTL+KG
Sbjct: 389 RTLRKG 394




76|Sequence|376|385|TLKKGPRQDP

>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   LKKGPRQDP 10
           +K+GPR+ P
Sbjct: 652 IKRGPRRTP 660


>sp|GM_VZVO|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Oka vaccine)

Query: 1  TLKKGPRQD 9
          T KKGPR +
Sbjct: 3  TQKKGPRSE 11


>sp|GM_VZVD|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1  TLKKGPRQD 9
          T KKGPR +
Sbjct: 3  TQKKGPRSE 11


>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7

Query: 5   GPRQDP 10
           GP++DP
Sbjct: 459 GPKKDP 464


>sp|ORF2_VZVO|MEMBRANE protein 2|Varicella-zoster virus (strain Oka vaccine)

Query: 2   LKKGPRQDP 10
           LK  PRQ P
Sbjct: 214 LKGSPRQQP 222


>sp|ORF2_VZVD|MEMBRANE protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   LKKGPRQDP 10
           LK  PRQ P
Sbjct: 214 LKGSPRQQP 222


>sp|PHOSP_PI4HB|PHOSPHOPROTEIN parainfluenza 4b virus (strain

Query: 1   TLKKGPRQDP 10
           +L KGP Q P
Sbjct: 296 SLNKGPEQVP 305


>sp|VP1_POVJC|MAJOR capsid protein VP1|JC polyomavirus (JCPyV) (JCV)

Query: 1  TLKKGPRQDP 10
          T +KG R+DP
Sbjct: 4  TKRKGERKDP 13


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2    LKKGPRQ 8
            LKKGP +
Sbjct: 5183 LKKGPHE 5189


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 2    LKKGPRQD 9
            LK+G RQD
Sbjct: 2066 LKRGFRQD 2073


>sp|VP22_HHV11|TEGUMENT protein VP22|Human herpesvirus 1 (strain 17)

Query: 1  TLKKGPRQDP 10
          ++K GPR+ P
Sbjct: 6  SVKSGPREVP 15


>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain

Query: 2   LKKGPR 7
           L KGPR
Sbjct: 303 LSKGPR 308




77|Sequence|381|390|PRQDPSAIVE

>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus

Query: 3   QDPSAIVE 10
           Q+P A+VE
Sbjct: 427 QNPKAVVE 434


>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate

Query: 3   QDPSAIVE 10
           Q+P A+VE
Sbjct: 427 QNPKAVVE 434


>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)

Query: 3   QDPSAIVE 10
           Q+P A+VE
Sbjct: 427 QNPKAVVE 434


>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 1   PRQDPSAIV 9
           P QDP++I+
Sbjct: 441 PNQDPTSIL 449


>sp|RP35_VAR67|DNA-DIRECTED RNA polymerase 35 kDa|Variola virus (isolate

Query: 1  PRQDPSAIVE 10
          PR++ S +VE
Sbjct: 4  PREENSIVVE 13


>sp|RP35_VACCT|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Tian Tan)

Query: 1  PRQDPSAIVE 10
          PR++ S +VE
Sbjct: 4  PREENSIVVE 13


>sp|RP35_VACCC|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  PRQDPSAIVE 10
          PR++ S +VE
Sbjct: 4  PREENSIVVE 13


>sp|RP35_VACCA|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1  PRQDPSAIVE 10
          PR++ S +VE
Sbjct: 4  PREENSIVVE 13


>sp|RP35_MONPV|DNA-DIRECTED RNA polymerase 35 kDa|Monkeypox virus (MPXV)

Query: 1  PRQDPSAIVE 10
          PR++ S +VE
Sbjct: 4  PREENSIVVE 13


>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   QDPSAIVE 10
           Q+P A++E
Sbjct: 427 QNPKAVIE 434


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 3   QDPSAIVE 10
           Q+P A++E
Sbjct: 427 QNPKAVIE 434


>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 1   PRQDPSAIV 9
           P QDP++I+
Sbjct: 441 PNQDPASIL 449


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 3    QDPSAIVE 10
            +DP A+VE
Sbjct: 1988 KDPVALVE 1995


>sp|VU84_HHV6Z|PROTEIN U84|Human herpesvirus 6B (strain Z29)

Query: 2   RQDPSAI 8
           RQDP+A+
Sbjct: 147 RQDPNAV 153


>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   PRQDPSA 7
           PRQ+P+A
Sbjct: 318 PRQNPAA 324


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 1   PRQDPSAIV 9
           PR+ P AI+
Sbjct: 470 PRKTPVAII 478


>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1   PRQDPSAIV 9
           P QDP++I+
Sbjct: 441 PNQDPTSIL 449


>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1   PRQDPSAIV 9
           P QDP++I+
Sbjct: 441 PNQDPASIL 449




78|Sequence|386|395|SAIVEKAGLK

>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 1   SAIVEKAGLK 10
           S+I+E  GLK
Sbjct: 959 SSIIENHGLK 968


>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)

Query: 2   AIVEKAG 8
           A+VE+AG
Sbjct: 814 ALVERAG 820


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 2   AIVEKAG 8
           A+VE+AG
Sbjct: 823 ALVERAG 829


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 2   AIVEKAG 8
           A+VE+AG
Sbjct: 823 ALVERAG 829




79|Sequence|391|400|KAGLKKSMTP

>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   KAGLKKSMTP 10
           +AG  +S+TP
Sbjct: 104 RAGALRSLTP 113


>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)

Query: 4   LKKSMTP 10
           LKK++TP
Sbjct: 601 LKKTITP 607


>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean

Query: 4   LKKSMTP 10
           LKK++TP
Sbjct: 601 LKKTVTP 607


>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee

Query: 4   LKKSMTP 10
           LKK++TP
Sbjct: 601 LKKTVTP 607


>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo

Query: 4   LKKSMTP 10
           LKK++TP
Sbjct: 601 LKKTVTP 607


>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)

Query: 4   LKKSMTP 10
           LKK++TP
Sbjct: 599 LKKTVTP 605


>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)

Query: 4   LKKSMTP 10
           LKK++TP
Sbjct: 599 LKKTVTP 605


>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean

Query: 4   LKKSMTP 10
           LKK++TP
Sbjct: 599 LKKTVTP 605


>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo

Query: 4   LKKSMTP 10
           LKK++TP
Sbjct: 599 LKKTVTP 605


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1    KAGLKKS 7
            ++GLKKS
Sbjct: 1146 RSGLKKS 1152




80|Sequence|396|405|KSMTPTQNRE

>sp|PG067_MONPV|PROTEIN OPG067|Monkeypox virus (MPXV)

Query: 1  KSMTPTQNR 9
          K+MT  QNR
Sbjct: 26 KTMTKFQNR 34


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 5   PTQNR 9
           PTQNR
Sbjct: 935 PTQNR 939


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 1    KSMTPTQNRE 10
            + +TP  NRE
Sbjct: 1745 RYLTPAVNRE 1754


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 5   PTQNR 9
           PTQNR
Sbjct: 935 PTQNR 939


>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)

Query: 2   SMTPTQNR 9
           S+TP Q+R
Sbjct: 477 SLTPGQDR 484


>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3  MTPTQNRE 10
          +TP +NR+
Sbjct: 60 LTPIRNRQ 67


>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3  MTPTQNRE 10
          +TP +NR+
Sbjct: 60 LTPIRNRQ 67


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 4   TPTQNRE 10
           TPT NR+
Sbjct: 506 TPTWNRK 512


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 4   TPTQNRE 10
           TPT NR+
Sbjct: 506 TPTWNRK 512


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 4   TPTQNRE 10
           TPT NR+
Sbjct: 506 TPTWNRK 512


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 4   TPTQNRE 10
           TPT NR+
Sbjct: 506 TPTWNRK 512




81|Sequence|401|410|TQNREKWIYY

>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 6    KWIYY 10
            KW YY
Sbjct: 1392 KWFYY 1396


>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin

Query: 1   TQNREKWI 8
           T NR +WI
Sbjct: 938 TSNRLEWI 945


>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)

Query: 1   TQNREKWI 8
           T NR +WI
Sbjct: 938 TSNRLEWI 945


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 4   REKWIYY 10
           ++ WIYY
Sbjct: 656 QKSWIYY 662


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 4   REKWIYY 10
           ++ WIYY
Sbjct: 656 QKSWIYY 662


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 4   REKWIYY 10
           ++ WIYY
Sbjct: 656 QKSWIYY 662


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 4   REKWIYY 10
           ++ WIYY
Sbjct: 656 QKSWIYY 662


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 4   REKWIYY 10
           ++ WIYY
Sbjct: 657 QKSWIYY 663


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 4   REKWIYY 10
           ++ WIYY
Sbjct: 656 QKSWIYY 662


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 4   REKWIYY 10
           ++ WIYY
Sbjct: 656 QKSWIYY 662


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 4   REKWIYY 10
           ++ WIYY
Sbjct: 656 QKSWIYY 662


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 4   REKWIYY 10
           ++ WIYY
Sbjct: 656 QKAWIYY 662


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 4   REKWIYY 10
           ++ WIYY
Sbjct: 656 QKAWIYY 662


>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 1   TQNREKWI 8
           T NR +W+
Sbjct: 442 TSNRPRWV 449


>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 6    KWIYY 10
            KW YY
Sbjct: 1371 KWYYY 1375


>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 6    KWIYY 10
            KW YY
Sbjct: 1371 KWYYY 1375


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired

Query: 4   REKWIYY 10
           +  WIYY
Sbjct: 657 QRSWIYY 663


>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41

Query: 6   KWIYY 10
           KW+YY
Sbjct: 138 KWVYY 142


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate

Query: 4   REKWIYY 10
           ++ W+YY
Sbjct: 656 QKSWVYY 662


>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 4   REKWIYY 10
           ++ WI+Y
Sbjct: 730 KKNWIWY 736


>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean

Query: 2   QNREKWIYY 10
           +NR   IYY
Sbjct: 119 RNRRSVIYY 127


>sp|VME1_CVH22|MEMBRANE protein|Human coronavirus 229E (HCoV-229E)

Query: 1   TQNREKWIYY 10
           +QN   W++Y
Sbjct: 188 SQNSTGWVFY 197


>sp|VE2_HPV53|REGULATORY protein E2|Human papillomavirus type 53

Query: 6   KWIYY 10
           KW+YY
Sbjct: 135 KWVYY 139


>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)

Query: 2   QNREKWIYY 10
           +NR+K +Y+
Sbjct: 552 RNRKKKVYW 560


>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   QNREKWIYY 10
           +NR+K +Y+
Sbjct: 552 RNRKKKVYW 560




82|Sequence|406|415|KWIYYCNGHG

>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    WIYYCNG 8
            W YYC G
Sbjct: 2578 WSYYCGG 2584


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    WIYYCNG 8
            W YYC G
Sbjct: 2578 WSYYCGG 2584


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    WIYYCNG 8
            W YYC G
Sbjct: 2575 WSYYCGG 2581


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 2    WIYYCNG 8
            W YYC G
Sbjct: 2578 WSYYCGG 2584


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    WIYYCNG 8
            W YYC G
Sbjct: 2578 WSYYCGG 2584


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    WIYYCNG 8
            W YYC G
Sbjct: 2578 WSYYCGG 2584


>sp|VE2_HPV53|REGULATORY protein E2|Human papillomavirus type 53

Query: 1   KWIYYCNGHG 10
           KW+YYC   G
Sbjct: 135 KWVYYCGEDG 144


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    WIYYCNG 8
            W YYC G
Sbjct: 2578 WSYYCGG 2584


>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30

Query: 1   KWIYYCNGHG 10
           +W+YYC  +G
Sbjct: 135 QWVYYCGDNG 144


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2    WIYYCNG 8
            W YYC G
Sbjct: 2580 WSYYCAG 2586


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2    WIYYCNG 8
            W YYC G
Sbjct: 2579 WSYYCAG 2585


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2    WIYYCNG 8
            W YYC G
Sbjct: 2580 WSYYCAG 2586


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2    WIYYCNG 8
            W YYC G
Sbjct: 2577 WSYYCAG 2583


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2    WIYYCNG 8
            W YYC G
Sbjct: 2577 WSYYCAG 2583


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2    WIYYCNG 8
            W YYC G
Sbjct: 2577 WSYYCAG 2583


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2    WIYYCNG 8
            W YYC G
Sbjct: 2577 WSYYCAG 2583


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2    WIYYCNG 8
            W YYC G
Sbjct: 2577 WSYYCAG 2583


>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United

Query: 1   KWIYYCN 7
           +W+++CN
Sbjct: 474 QWLHHCN 480


>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41

Query: 1   KWIYY 5
           KW+YY
Sbjct: 138 KWVYY 142


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 3   IYYCN 7
           +YYCN
Sbjct: 924 VYYCN 928


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 3   IYYCN 7
           +YYCN
Sbjct: 924 VYYCN 928


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 3   IYYCN 7
           +YYCN
Sbjct: 924 VYYCN 928


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3    IYYCNGH 9
            + YC+GH
Sbjct: 2465 LLYCDGH 2471


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 3    IYYCNGH 9
            + YC+GH
Sbjct: 2438 LLYCDGH 2444


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 3    IYYCNGH 9
            + YC+GH
Sbjct: 2443 LLYCDGH 2449


>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain

Query: 2   WIYYCN 7
           WI+ CN
Sbjct: 239 WIHLCN 244


>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain

Query: 2   WIYYCN 7
           WI+ CN
Sbjct: 239 WIHLCN 244


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 2    WIYYC 6
            W YYC
Sbjct: 2611 WSYYC 2615


>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain

Query: 2   WIYYCN 7
           WI+ CN
Sbjct: 235 WIHVCN 240


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 2    WIYYC 6
            W YYC
Sbjct: 2606 WSYYC 2610


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 2    WIYYC 6
            W YYC
Sbjct: 2607 WSYYC 2611


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 2    WIYYC 6
            W YYC
Sbjct: 2611 WSYYC 2615


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1    KWIYYC 6
            +WI++C
Sbjct: 2990 RWIWFC 2995


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 2    WIYYC 6
            W YYC
Sbjct: 2608 WSYYC 2612


>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65

Query: 1   KWIYYC 6
           +WIY C
Sbjct: 374 EWIYKC 379


>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)

Query: 3   IYYCNGH 9
           I YCNG 
Sbjct: 438 IVYCNGQ 444


>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4

Query: 1   KWIYYC 6
           +WIY C
Sbjct: 375 EWIYKC 380


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 2   WIYYCN 7
           WIYY +
Sbjct: 659 WIYYSD 664


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 2   WIYYCN 7
           WIYY +
Sbjct: 659 WIYYSD 664


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 2   WIYYCN 7
           WIYY +
Sbjct: 659 WIYYSD 664


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 2   WIYYCN 7
           WIYY +
Sbjct: 659 WIYYSD 664


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 2   WIYYCN 7
           WIYY +
Sbjct: 659 WIYYSD 664


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 2   WIYYCN 7
           WIYY +
Sbjct: 659 WIYYSD 664


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 2   WIYYCN 7
           WIYY +
Sbjct: 659 WIYYSD 664


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 2   WIYYCN 7
           WIYY +
Sbjct: 659 WIYYSD 664


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired

Query: 2   WIYYCN 7
           WIYY +
Sbjct: 660 WIYYSD 665


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 2   WIYYCN 7
           WIYY +
Sbjct: 659 WIYYSD 664


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 2   WIYYCN 7
           WIYY +
Sbjct: 660 WIYYSD 665


>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 1    KWIYY 5
            KW YY
Sbjct: 1392 KWFYY 1396


>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)

Query: 3   IYYCNGH 9
           I YCNG 
Sbjct: 436 IVYCNGQ 442


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1   KWIYYCNGHG 10
           KWI+   G+G
Sbjct: 144 KWIHDSAGYG 153


>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus

Query: 3   IYYCN 7
           I+YCN
Sbjct: 320 IFYCN 324


>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)

Query: 3   IYYCN 7
           I+YCN
Sbjct: 320 IFYCN 324


>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   IYYCN 7
           I+YCN
Sbjct: 320 IFYCN 324


>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)

Query: 3   IYYCN 7
           I+YCN
Sbjct: 320 IFYCN 324


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1   KWIYYCNGHG 10
           KWI+   G+G
Sbjct: 144 KWIHDSAGYG 153


>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P

Query: 3   IYYCNGHG 10
           ++YC G G
Sbjct: 141 VFYCIGSG 148


Query: 3   IYYCNGH 9
           IY+ +GH
Sbjct: 282 IYWSSGH 288


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1   KWIYYCNGHG 10
           KWI+   G+G
Sbjct: 144 KWIHDSAGYG 153


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   KWIYYCNGHG 10
           KWI+   G+G
Sbjct: 144 KWIHDSAGYG 153


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1   KWIYYCNGHG 10
           KWI+   G+G
Sbjct: 144 KWIHDSAGYG 153


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 4    YYCNG 8
            YYC+G
Sbjct: 1893 YYCDG 1897


Query: 5    YCNG 8
            YCNG
Sbjct: 2265 YCNG 2268


>sp|VE2_HPV70|REGULATORY protein E2|Human papillomavirus type 70

Query: 1   KWIYYCNGH 9
           KW  +CNG+
Sbjct: 189 KWEVHCNGN 197


>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)

Query: 4  YYCN 7
          YYCN
Sbjct: 66 YYCN 69


>sp|PG082_VARV|TELOMERE-BINDING protein OPG082|Variola virus

Query: 4  YYCN 7
          YYCN
Sbjct: 41 YYCN 44


>sp|PG082_VAR67|TELOMERE-BINDING protein OPG082|Variola virus (isolate Human/India/Ind3/1967)

Query: 4  YYCN 7
          YYCN
Sbjct: 41 YYCN 44


>sp|PG082_VACCC|TELOMERE-BINDING protein OPG082|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4  YYCN 7
          YYCN
Sbjct: 41 YYCN 44


>sp|PG082_MONPV|TELOMERE-BINDING protein OPG082|Monkeypox virus (MPXV)

Query: 4  YYCN 7
          YYCN
Sbjct: 41 YYCN 44


>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)

Query: 4    YYCN 7
            YYCN
Sbjct: 1214 YYCN 1217


>sp|PG055_VACCP|PROTEIN OPG055|Vaccinia virus (strain L-IVP) (VACV)

Query: 1   KWIYYCNGHG 10
           ++++YCN + 
Sbjct: 259 EFLHYCNSYA 268


>sp|PG055_VACCC|PROTEIN OPG055|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   KWIYYCNGHG 10
           ++++YCN + 
Sbjct: 263 EFLHYCNSYA 272


>sp|PG055_MONPV|PROTEIN OPG055|Monkeypox virus (MPXV)

Query: 1   KWIYYCNGHG 10
           ++++YCN + 
Sbjct: 263 EFLHYCNSYA 272


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 4    YYCN 7
            YYCN
Sbjct: 1358 YYCN 1361


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 4    YYCNG 8
            YYC+G
Sbjct: 1893 YYCDG 1897


Query: 5    YCNG 8
            YCNG
Sbjct: 2265 YCNG 2268


>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)

Query: 1   KWIYYCNGHG 10
           K +  CN HG
Sbjct: 354 KMVNKCNKHG 363


>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 1    KWIYY 5
            KW YY
Sbjct: 1371 KWYYY 1375


>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 1    KWIYY 5
            KW YY
Sbjct: 1371 KWYYY 1375


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 4    YYCNGH 9
            Y CN H
Sbjct: 2007 YLCNSH 2012


>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P

Query: 2   WIYYCNGH 9
           W+Y   GH
Sbjct: 104 WLYIVGGH 111


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 4    YYCNGH 9
            Y CN H
Sbjct: 2002 YLCNSH 2007


>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)

Query: 2   WIYYCN 7
           W++ CN
Sbjct: 235 WLHVCN 240


>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2   WIYYC 6
           +IYYC
Sbjct: 191 FIYYC 195


>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2   WIYYC 6
           +IYYC
Sbjct: 191 FIYYC 195


>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2   WIYYC 6
           +IYYC
Sbjct: 191 FIYYC 195


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 4    YYCNGH 9
            Y CN H
Sbjct: 1999 YLCNSH 2004


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 4    YYCNGH 9
            Y CN H
Sbjct: 1990 YLCNSH 1995


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 4    YYCNGH 9
            Y CN H
Sbjct: 1993 YLCNSH 1998


>sp|D3_VARV|CORE protein D3|Variola virus

Query: 4   YYCN 7
           YYCN
Sbjct: 147 YYCN 150


>sp|D3_VAR67|CORE protein D3|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 4   YYCN 7
           YYCN
Sbjct: 147 YYCN 150


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 4    YYCNGH 9
            Y CN H
Sbjct: 2009 YLCNSH 2014


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate

Query: 2   WIYYCN 7
           W+YY +
Sbjct: 659 WVYYSD 664


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 4    YYCNGH 9
            Y CN H
Sbjct: 1991 YLCNSH 1996


>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)

Query: 3   IYYCNGH 9
           I YCNG 
Sbjct: 430 IVYCNGQ 436


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 4    YYCNGH 9
            Y CN H
Sbjct: 2001 YLCNSH 2006


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 4    YYCNGH 9
            Y CN H
Sbjct: 1999 YLCNSH 2004


>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo

Query: 3   IYYCNGH 9
           I YCNG 
Sbjct: 430 IVYCNGQ 436


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 4    YYCNGH 9
            Y CN H
Sbjct: 1990 YLCNSH 1995


>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)

Query: 3   IYYCNGH 9
           I YCNG 
Sbjct: 430 IVYCNGQ 436


>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean

Query: 3   IYYCNGH 9
           I YCNG 
Sbjct: 430 IVYCNGQ 436


>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38

Query: 2   WIYYC 6
           WI++C
Sbjct: 380 WIHHC 384


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 4    YYCNGH 9
            Y CN H
Sbjct: 1991 YLCNSH 1996


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 4    YYCNGH 9
            Y CN H
Sbjct: 1991 YLCNSH 1996


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 4    YYCNGH 9
            Y CN H
Sbjct: 1988 YLCNSH 1993


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 4    YYCNGH 9
            Y CN H
Sbjct: 2000 YLCNSH 2005


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 4    YYCNGH 9
            Y CN H
Sbjct: 1989 YLCNSH 1994


>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin

Query: 3   IYYCNGH 9
           + YCNG 
Sbjct: 436 VVYCNGQ 442


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 4    YYCNGH 9
            Y CN H
Sbjct: 1997 YLCNSH 2002


>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)

Query: 3   IYYCNGH 9
           + YCNG 
Sbjct: 435 VVYCNGQ 441


>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka

Query: 5  YCNG 8
          YCNG
Sbjct: 75 YCNG 78


>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain

Query: 5  YCNG 8
          YCNG
Sbjct: 75 YCNG 78


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 4    YYCNGH 9
            Y CN H
Sbjct: 1989 YLCNSH 1994


>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)

Query: 1   KWIYYCNGH 9
           +W+ +CN  
Sbjct: 462 QWLTWCNAQ 470


>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2   WIYYC 6
           W+ YC
Sbjct: 311 WLLYC 315


>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   WIYYC 6
           W+ YC
Sbjct: 311 WLLYC 315


>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   WIYYC 6
           W+ YC
Sbjct: 311 WLLYC 315


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 2   WIYYCNGH 9
           W+   NGH
Sbjct: 487 WMRKTNGH 494


>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)

Query: 1   KWIYYCNGH 9
           +W+ +CN  
Sbjct: 462 QWLTWCNAQ 470


>sp|DPOL_VARV|DNA polymerase|Variola virus

Query: 2   WIYYCNG 8
           W Y  NG
Sbjct: 112 WFYISNG 118


>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2   WIYYCNG 8
           W Y  NG
Sbjct: 112 WFYISNG 118


>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   WIYYCNG 8
           W Y  NG
Sbjct: 112 WFYISNG 118


>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)

Query: 2   WIYYCNG 8
           W Y  NG
Sbjct: 112 WFYISNG 118


>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)

Query: 2   WIYYCNG 8
           W Y  NG
Sbjct: 112 WFYISNG 118


>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 1  KWIYYCNG 8
          +W+ +C+ 
Sbjct: 34 RWVTFCSA 41


>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 1  KWIYYCNG 8
          +W+ +C+ 
Sbjct: 34 RWVTFCSA 41


>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 1  KWIYYCNG 8
          +W+ +C+ 
Sbjct: 34 RWVTFCSA 41


>sp|GAG_XMRV6|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 1  KWIYYCNG 8
          +W+ +C+ 
Sbjct: 34 RWVTFCSA 41


>sp|GAG_XMRV4|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 1  KWIYYCNG 8
          +W+ +C+ 
Sbjct: 34 RWVTFCSA 41


>sp|GAG_XMRV3|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 1  KWIYYCNG 8
          +W+ +C+ 
Sbjct: 34 RWVTFCSA 41


>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)

Query: 3   IYYCNGH 9
           + YCNG 
Sbjct: 432 VIYCNGQ 438


>sp|PG055_VARV|PROTEIN OPG055|Variola virus

Query: 1   KWIYYCN 7
           ++++YCN
Sbjct: 263 EFLHYCN 269


>sp|PG055_VAR67|PROTEIN OPG055|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   KWIYYCN 7
           ++++YCN
Sbjct: 263 EFLHYCN 269


>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22

Query: 2   WIYYC 6
           WI++C
Sbjct: 384 WIHHC 388


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 6    CNGH 9
            CNGH
Sbjct: 5133 CNGH 5136


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 6    CNGH 9
            CNGH
Sbjct: 5163 CNGH 5166


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 6    CNGH 9
            CNGH
Sbjct: 5113 CNGH 5116


>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo

Query: 3   IYYCNGH 9
           + YCNG 
Sbjct: 432 VVYCNGQ 438


>sp|VE2_HPV63|REGULATORY protein E2|Human papillomavirus type 63

Query: 3   IYYCNG 8
           IYY NG
Sbjct: 137 IYYQNG 142


>sp|HEMA_MONPV|PROTEIN OPG185|Monkeypox virus (MPXV)

Query: 4   YYCNGH 9
           Y CN H
Sbjct: 298 YICNKH 303


>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean

Query: 3   IYYCNGH 9
           + YCNG 
Sbjct: 432 VVYCNGQ 438


>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee

Query: 3   IYYCNGH 9
           + YCNG 
Sbjct: 432 VVYCNGQ 438


>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1

Query: 1  KWIYYCNG 8
          KW++ C G
Sbjct: 90 KWLWQCLG 97


>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWERYC 541


>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain

Query: 2   WIYYCN 7
           W + CN
Sbjct: 237 WFHLCN 242


>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)

Query: 2   WIYYCN 7
           W + CN
Sbjct: 237 WFHLCN 242


>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain

Query: 2   WIYYCN 7
           W + CN
Sbjct: 237 WFHLCN 242


>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain

Query: 2   WIYYCN 7
           W + CN
Sbjct: 237 WFHLCN 242


>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)

Query: 2   WIYYCN 7
           W + CN
Sbjct: 237 WFHLCN 242


>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 529 KWEKYC 534


>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 532 KWEKYC 537


>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 529 KWEKYC 534


>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 513 KWEKYC 518


>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I01A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1  KWIYYC 6
          KW  YC
Sbjct: 59 KWEKYC 64


>sp|PA_I01A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1  KWIYYC 6
          KW  YC
Sbjct: 59 KWEKYC 64


>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31

Query: 1   KWIYYC 6
           KW  YC
Sbjct: 536 KWEKYC 541


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1    KWIYYC 6
            +W ++C
Sbjct: 2990 RWFWFC 2995


>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)

Query: 6   CNGHG 10
           CN HG
Sbjct: 250 CNNHG 254


>sp|U22_HHV6U|GLYCOPROTEIN U22|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   KWIYYC 6
           +++YYC
Sbjct: 171 RFVYYC 176


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1    KWIYYC 6
            +W ++C
Sbjct: 2990 RWFFWC 2995


>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)

Query: 4   YYCNGH 9
           Y CNG+
Sbjct: 611 YVCNGN 616


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    KWIYYC 6
            +W ++C
Sbjct: 2990 RWFWFC 2995


>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)

Query: 6   CNGHG 10
           CN HG
Sbjct: 250 CNNHG 254


>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)

Query: 1   KWIYYCN 7
           KWI  CN
Sbjct: 225 KWILDCN 231


>sp|VB18_VARV|ANKYRIN repeat protein B18|Variola virus

Query: 6   CNGHG 10
           CN HG
Sbjct: 250 CNNHG 254


>sp|VB18_VAR67|ANKYRIN repeat protein B18|Variola virus (isolate Human/India/Ind3/1967)

Query: 6   CNGHG 10
           CN HG
Sbjct: 250 CNNHG 254


>sp|E434_ADE09|EARLY E4 34 kDa protein|Human adenovirus D serotype 9

Query: 1   KWIYYCN 7
           +WI +C+
Sbjct: 109 RWILHCH 115


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 3   IYYCNG 8
           +Y+C G
Sbjct: 172 VYHCEG 177


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 3   IYYCNG 8
           +Y+C G
Sbjct: 172 VYHCEG 177


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 3   IYYCNG 8
           +Y+C G
Sbjct: 172 VYHCEG 177


>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23

Query: 2   WIYYC 6
           W+++C
Sbjct: 383 WVHHC 387


>sp|U22_HHV6Z|PROTEIN U22|Human herpesvirus 6B (strain Z29)

Query: 1   KWIYYC 6
           +++YYC
Sbjct: 171 RFVYYC 176




83|Sequence|411|420|CNGHGIDILK

>sp|VB18_VARV|ANKYRIN repeat protein B18|Variola virus

Query: 1   CNGHGI 6
           CN HG+
Sbjct: 250 CNNHGL 255


>sp|VB18_VAR67|ANKYRIN repeat protein B18|Variola virus (isolate Human/India/Ind3/1967)

Query: 1   CNGHGI 6
           CN HG+
Sbjct: 250 CNNHGL 255


>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   CNGHGI 6
           CN HG+
Sbjct: 250 CNNHGL 255


>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)

Query: 1   CNGHGI 6
           CN HG+
Sbjct: 250 CNNHGL 255


>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1   CNGHG 5
           C GHG
Sbjct: 123 CTGHG 127


>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1   CNGHG 5
           C GHG
Sbjct: 123 CTGHG 127


>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)

Query: 1   CNGHG 5
           C GHG
Sbjct: 123 CTGHG 127


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 2    NGHGIDIL 9
            NG G+DI+
Sbjct: 1431 NGVGVDIV 1438


>sp|TRX1_HHV6Z|TRIPLEX capsid protein 1|Human herpesvirus 6B (strain Z29)

Query: 2   NGHGIDILK 10
           N HG+ +LK
Sbjct: 169 NIHGLTVLK 177


>sp|TRX1_HHV6H|TRIPLEX capsid protein 1|Human herpesvirus 6B (HHV-6 variant

Query: 2   NGHGIDILK 10
           N HG+ +LK
Sbjct: 169 NIHGLTVLK 177


>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63

Query: 5   GIDILK 10
           G+DILK
Sbjct: 162 GVDILK 167


>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3  GHGIDILK 10
           HG+DI++
Sbjct: 34 AHGLDIVE 41


>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3  GHGIDILK 10
           HG+DI++
Sbjct: 34 AHGLDIVE 41


>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)

Query: 1   CNGHG 5
           CN HG
Sbjct: 359 CNKHG 363


>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 4   HGIDI 8
           HGID+
Sbjct: 431 HGIDV 435


>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   CNGHGIDI 8
           CN H I +
Sbjct: 247 CNTHSITV 254


>sp|PG061_VACCC|PROTEIN OPG061|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   NGHGIDI 8
           NG GI+I
Sbjct: 177 NGRGINI 183


>sp|PG061_VACCP|PROTEIN OPG061|Vaccinia virus (strain L-IVP) (VACV)

Query: 2   NGHGIDI 8
           NG GI+I
Sbjct: 177 NGRGINI 183


>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus

Query: 2   NGHGIDIL 9
           +GHGI+ L
Sbjct: 489 SGHGINNL 496


>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)

Query: 2   NGHGIDIL 9
           +GHGI+ L
Sbjct: 489 SGHGINNL 496


>sp|PG061_VARV|PROTEIN OPG061|Variola virus

Query: 2   NGHGIDI 8
           NG GI+I
Sbjct: 177 NGRGINI 183


>sp|PG061_VAR67|PROTEIN OPG061|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2   NGHGIDI 8
           NG GI+I
Sbjct: 177 NGRGINI 183


>sp|PG061_MONPV|PROTEIN OPG061|Monkeypox virus (MPXV)

Query: 2   NGHGIDI 8
           NG GI+I
Sbjct: 177 NGRGINI 183


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    CNGHGIDI 8
            CN  G D+
Sbjct: 5374 CNAPGCDV 5381


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    CNGHGIDI 8
            CN  G D+
Sbjct: 5351 CNAPGCDV 5358


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1    CNGHGIDI 8
            CN  G D+
Sbjct: 5347 CNAPGCDV 5354


>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)

Query: 1   CNGHGID 7
           C G G+D
Sbjct: 546 CAGFGVD 552




84|Sequence|416|425|IDILKLVAAQ

>sp|NCAP_CVH22|NUCLEOPROTEIN coronavirus 229E (HCoV-229E)

Query: 2   DILKLVAA 9
           DI+K VAA
Sbjct: 181 DIMKAVAA 188




85|Sequence|421|430|LVAAQVGSQW

>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b

Query: 3   AAQVGSQ 9
            AQ+GSQ
Sbjct: 356 GAQIGSQ 362


>sp|VL2_HPV47|MINOR capsid protein L2|Human papillomavirus 47

Query: 3   AAQVGSQ 9
            AQ+GSQ
Sbjct: 356 GAQIGSQ 362


>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36

Query: 3   AAQVGSQ 9
            AQ+GSQ
Sbjct: 356 GAQIGSQ 362


>sp|VL2_HPV25|MINOR capsid protein L2|Human papillomavirus 25

Query: 3   AAQVGSQ 9
            AQ+GSQ
Sbjct: 354 GAQIGSQ 360


>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20

Query: 3   AAQVGSQ 9
            AQ+GSQ
Sbjct: 355 GAQIGSQ 361


>sp|VL2_HPV19|MINOR capsid protein L2|Human papillomavirus 19

Query: 3   AAQVGSQ 9
            AQ+GSQ
Sbjct: 354 GAQIGSQ 360


>sp|VL2_HPV14|MINOR capsid protein L2|Human papillomavirus 14

Query: 3   AAQVGSQ 9
            AQ+GSQ
Sbjct: 355 GAQIGSQ 361


>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12

Query: 3   AAQVGSQ 9
            AQ+GSQ
Sbjct: 356 GAQIGSQ 362


>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8

Query: 3   AAQVGSQ 9
            AQ+GSQ
Sbjct: 356 GAQIGSQ 362


>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5

Query: 3   AAQVGSQ 9
            AQ+GSQ
Sbjct: 356 GAQIGSQ 362


>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)

Query: 1   LVAAQVGSQW 10
           +   Q+G +W
Sbjct: 317 MAEVQIGDRW 326




86|Sequence|426|435|VGSQWKDIYQ

>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48

Query: 1   VGSQWKDIYQ 10
           +G +WK+I Q
Sbjct: 380 IGEEWKEIVQ 389


>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)

Query: 2  GSQWKDIY 9
          GS+W +IY
Sbjct: 86 GSEWVEIY 93


>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 2  GSQWKDIY 9
          GS+W +IY
Sbjct: 86 GSEWVEIY 93


>sp|VE6_HPV26|PROTEIN E6|Human papillomavirus type 26

Query: 4  QWKDIY 9
          QW D+Y
Sbjct: 38 QWADVY 43


>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate

Query: 2  GSQWKDIYQ 10
          G Q KD+Y+
Sbjct: 73 GEQIKDVYK 81


>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)

Query: 2  GSQWKDIYQ 10
          G Q KD+Y+
Sbjct: 73 GEQIKDVYK 81


>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2

Query: 1  VGSQWKDIYQ 10
          +GS W+D  Q
Sbjct: 83 LGSTWRDQAQ 92


>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3

Query: 1  VGSQWKDIYQ 10
          +GS W+D  Q
Sbjct: 83 LGSAWRDQSQ 92


>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3

Query: 1  VGSQWKDIYQ 10
          +GS W+D  Q
Sbjct: 83 LGSAWRDQSQ 92


>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4

Query: 1  VGSQWKDIYQ 10
          +GS W+D  Q
Sbjct: 81 LGSAWRDQSQ 90


>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 1  VGSQWKDIYQ 10
          +GS W+D  Q
Sbjct: 83 LGSAWRDQAQ 92


>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 1  VGSQWKDIYQ 10
          +GS W+D  Q
Sbjct: 83 LGSAWRDQAQ 92


>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 1  VGSQWKDIYQ 10
          +GS W+D  Q
Sbjct: 83 LGSAWRDQAQ 92


>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 1  VGSQWKDIYQ 10
          +GS W+D  Q
Sbjct: 83 LGSAWRDQAQ 92


>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 1  VGSQWKDIYQ 10
          +GS W+D  Q
Sbjct: 83 LGSAWRDQAQ 92


>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann

Query: 2   GSQWKDIYQ 10
           G  W+ IY 
Sbjct: 239 GENWRQIYH 247


>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann

Query: 2   GSQWKDIYQ 10
           G  W+ IY 
Sbjct: 239 GENWRQIYH 247


>sp|PG061_VARV|PROTEIN OPG061|Variola virus

Query: 3  SQWKDIYQ 10
          + WKD+ Q
Sbjct: 53 ATWKDVIQ 60


>sp|PG061_VAR67|PROTEIN OPG061|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3  SQWKDIYQ 10
          + WKD+ Q
Sbjct: 53 ATWKDVIQ 60


>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)

Query: 2   GSQWKDIYQ 10
           G  W+ IY 
Sbjct: 239 GENWRQIYH 247


>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)

Query: 2   GSQWKDIYQ 10
           G  W+ IY 
Sbjct: 239 GENWRQIYH 247


>sp|ORF27_HHV8P|PROTEIN ORF27|Human herpesvirus 8 type P

Query: 5   WKDIY 9
           W+DIY
Sbjct: 259 WEDIY 263


>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73

Query: 2   GSQWKDI 8
           G  WKDI
Sbjct: 437 GGNWKDI 443


>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain

Query: 5   WKDIYQ 10
           W D+YQ
Sbjct: 313 WLDLYQ 318


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 5   WKDIYQ 10
           WK+ YQ
Sbjct: 971 WKNTYQ 976


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 5   WKDIYQ 10
           WK+ YQ
Sbjct: 973 WKNTYQ 978


>sp|MCES_VARV|MRNA-CAPPING enzyme regulatory subunit|Variola virus

Query: 3   SQWKDI 8
           S WKD+
Sbjct: 220 SSWKDV 225


>sp|MCES_VAR67|MRNA-CAPPING enzyme regulatory subunit OPG124|Variola virus (isolate

Query: 3   SQWKDI 8
           S WKD+
Sbjct: 220 SSWKDV 225


>sp|MCES_VACCC|MRNA-CAPPING enzyme regulatory subunit OPG124|Vaccinia virus (strain Copenhagen)

Query: 3   SQWKDI 8
           S WKD+
Sbjct: 220 SSWKDV 225


>sp|MCES_VACCA|MRNA-CAPPING enzyme regulatory subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 3   SQWKDI 8
           S WKD+
Sbjct: 220 SSWKDV 225


>sp|MCES_MONPV|MRNA-CAPPING enzyme regulatory subunit OPG124|Monkeypox virus (MPXV)

Query: 3   SQWKDI 8
           S WKD+
Sbjct: 220 SSWKDV 225


>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)

Query: 2  GSQWKDIY 9
          G +W +IY
Sbjct: 85 GREWVEIY 92


>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)

Query: 2  GSQWKDIY 9
          G +W +IY
Sbjct: 85 GREWVEIY 92


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 1    VGSQWKDIY 9
            V + W DI+
Sbjct: 2200 VSATWSDIF 2208


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1    VGSQWKDIYQ 10
            + S WKD+ +
Sbjct: 2539 INSVWKDLLE 2548


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    VGSQWKDIYQ 10
            + S WKD+ +
Sbjct: 2539 INSVWKDLLE 2548


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1    VGSQWKDIYQ 10
            + S WKD+ +
Sbjct: 2539 INSVWKDLLE 2548


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 2  GSQWKDIY 9
          G +W +IY
Sbjct: 85 GREWVEIY 92


>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4

Query: 2   GSQWKDIYQ 10
           GSQ + +YQ
Sbjct: 525 GSQLQPLYQ 533


>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)

Query: 2  GSQWKDIY 9
          G +W +IY
Sbjct: 85 GREWVEIY 92


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 1    VGSQWKD 7
            +G QWK+
Sbjct: 2537 LGEQWKE 2543


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 4   QWKDIYQ 10
           +WKDI +
Sbjct: 842 KWKDILK 848


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 1    VGSQWKD 7
            +G QWK+
Sbjct: 2535 LGEQWKE 2541


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 1    VGSQWKD 7
            +G QWK+
Sbjct: 2537 LGEQWKE 2543


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1    VGSQWKD 7
            +G QWK+
Sbjct: 2535 LGEQWKE 2541


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1    VGSQWKD 7
            +G QWK+
Sbjct: 2535 LGEQWKE 2541


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 1    VGSQWKD 7
            +G QWK+
Sbjct: 2535 LGEQWKE 2541


>sp|VE2_HPV49|REGULATORY protein E2|Human papillomavirus type 49

Query: 1   VGSQWKDIY 9
           V + WK+IY
Sbjct: 130 VYTAWKEIY 138


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 4   QWKDI 8
           +WKDI
Sbjct: 933 KWKDI 937


>sp|YVAG_VACCC|UNCHARACTERIZED 9.3 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 5  WKDIYQ 10
          WK+IYQ
Sbjct: 12 WKEIYQ 17


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 1    VGSQWKDI 8
            + S WKD+
Sbjct: 2536 ISSVWKDL 2543


>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1

Query: 4  QWKDIY 9
          QW+ IY
Sbjct: 15 QWESIY 20


>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)

Query: 5   WKDIY 9
           W DIY
Sbjct: 254 WPDIY 258


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 5   WKDIYQ 10
           WK  YQ
Sbjct: 973 WKSTYQ 978


>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)

Query: 5   WKDIY 9
           W DIY
Sbjct: 254 WPDIY 258


>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)

Query: 5   WKDIY 9
           W DIY
Sbjct: 254 WPDIY 258


>sp|VE6_HPV69|PROTEIN E6|Human papillomavirus 69

Query: 4  QWKDIY 9
          +W D+Y
Sbjct: 38 EWADVY 43


>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)

Query: 5   WKDIY 9
           W DIY
Sbjct: 254 WPDIY 258


>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)

Query: 5   WKDIY 9
           W DIY
Sbjct: 254 WPDIY 258


>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate Human/India/Ind3/1967)

Query: 5   WKDIY 9
           W DIY
Sbjct: 254 WPDIY 258


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1    VGSQWKDIYQ 10
            + S WKD+ +
Sbjct: 2561 IKSVWKDLLE 2570


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1    VGSQWKDIYQ 10
            + S WKD+ +
Sbjct: 2561 IKSVWKDLLE 2570


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 1    VGSQWKDIYQ 10
            + S WKD+ +
Sbjct: 2561 IKSVWKDLLE 2570


>sp|VE2_HPV52|REGULATORY protein E2|Human papillomavirus 52

Query: 3   SQWKDIY 9
           + WK+IY
Sbjct: 132 TNWKEIY 138


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    VGSQWKDIYQ 10
            + S WKD+ +
Sbjct: 2538 IHSVWKDLLE 2547


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 2   GSQWKD 7
           GSQW +
Sbjct: 521 GSQWNN 526


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    VGSQWKDIYQ 10
            + S WKD+ +
Sbjct: 2538 IRSVWKDLLE 2547


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    VGSQWKDIYQ 10
            + S WKD+ +
Sbjct: 2538 IRSVWKDLLE 2547


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    VGSQWKDIYQ 10
            + S WKD+ +
Sbjct: 2538 IRSVWKDLLE 2547


>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)

Query: 2   GSQWKDIY 9
           GS+W++ +
Sbjct: 249 GSEWQEYW 256


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    VGSQWKDIYQ 10
            + S WKD+ +
Sbjct: 2538 IRSVWKDLLE 2547




87|Sequence|431|440|KDIYQFLCNA

>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2

Query: 1   KDIYQFLCNA 10
           +D+ Q+LC++
Sbjct: 192 QDLLQYLCSS 201


>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 1   KDIYQFLCNA 10
           +D+ Q+LC++
Sbjct: 186 QDLLQYLCSS 195


>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 1   KDIYQFLCNA 10
           +D+ Q+LC++
Sbjct: 186 QDLLQYLCSS 195


>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 1   KDIYQFLCNA 10
           +D+ Q+LC++
Sbjct: 186 QDLLQYLCSS 195


>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 1   KDIYQFLCNA 10
           +D+ Q+LC++
Sbjct: 192 QDLLQYLCSS 201


>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1   KDIYQFLCNA 10
           +D+ Q+LC++
Sbjct: 186 QDLLQYLCSS 195


>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1   KDIYQFLCNA 10
           +D+ Q+LC++
Sbjct: 186 QDLLQYLCSS 195


>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1   KDIYQFLCNA 10
           +D+ Q+LC++
Sbjct: 186 QDLLQYLCSS 195


>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2

Query: 1   KDIYQFLCNA 10
           +D+ Q+LC++
Sbjct: 192 QDLLQYLCSS 201


>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1

Query: 1   KDIYQFLCNA 10
           +D+ Q+LC++
Sbjct: 186 QDLLQYLCSS 195


>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1

Query: 1   KDIYQFLCNA 10
           +D+ Q+LC++
Sbjct: 186 QDLLQYLCSS 195


>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1

Query: 1   KDIYQFLCNA 10
           +D+ Q+LC++
Sbjct: 186 QDLLQYLCSS 195


>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1

Query: 1   KDIYQFLCNA 10
           +D+ Q+LC++
Sbjct: 186 QDLLQYLCSS 195


>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 2   DIYQFLCNA 10
           D+Y+ LC+A
Sbjct: 978 DVYKELCDA 986


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 2   DIYQFLCNA 10
           D+Y+ LC+A
Sbjct: 977 DVYKELCDA 985


>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3

Query: 2   DIYQFLCNA 10
           D+ Q+LC++
Sbjct: 180 DLLQYLCSS 188


>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3

Query: 2   DIYQFLCNA 10
           D+ Q+LC++
Sbjct: 180 DLLQYLCSS 188


>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 2   DIYQFLCNA 10
           D+ Q+LC++
Sbjct: 180 DLLQYLCSS 188


>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 2   DIYQFLCNA 10
           D+ Q+LC++
Sbjct: 180 DLLQYLCSS 188


>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3

Query: 2   DIYQFLCNA 10
           D+ Q+LC++
Sbjct: 180 DLLQYLCSS 188


>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3

Query: 2   DIYQFLCNA 10
           D+ Q+LC++
Sbjct: 180 DLLQYLCSS 188


>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40

Query: 1   KDIYQF 6
           KDI+QF
Sbjct: 372 KDIFQF 377


>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40

Query: 1   KDIYQFLCN 9
           +D Y+FL N
Sbjct: 414 EDTYRFLTN 422


>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7

Query: 1   KDIYQFLCN 9
           +D Y+FL N
Sbjct: 414 EDTYRFLTN 422


>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43

Query: 1   KDIYQFLCN 9
           +D Y+FL N
Sbjct: 442 EDTYRFLSN 450


>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1    KDIYQF 6
            K+IYQF
Sbjct: 1002 KEIYQF 1007


>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1    KDIYQF 6
            K+IYQF
Sbjct: 1002 KEIYQF 1007


>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)

Query: 1  KDIYQFLCNA 10
          +++ QFLC A
Sbjct: 69 EEMQQFLCGA 78


>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United

Query: 4   YQFLC 8
           Y+FLC
Sbjct: 266 YEFLC 270


>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)

Query: 2   DIYQFLC 8
           D+Y+F C
Sbjct: 322 DVYKFSC 328


>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2  DIYQFLCN 9
          DI+++LC+
Sbjct: 73 DIFEYLCS 80


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1    KDIYQFLCN 9
            +DI++++C+
Sbjct: 1982 RDIWEWVCS 1990


>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)

Query: 2  DIYQFLCN 9
          DI+++LC+
Sbjct: 73 DIFEYLCS 80


>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4   YQFLC 8
           +QFLC
Sbjct: 436 FQFLC 440


>sp|AP3A_SARS|ORF3A protein|Severe acute respiratory syndrome coronavirus

Query: 4  YQFLCN 9
          +QF+CN
Sbjct: 77 FQFICN 82


>sp|VE2_HPV50|REGULATORY protein E2|Human papillomavirus type 50

Query: 1   KDIYQFLC 8
           K++Y ++C
Sbjct: 132 KNVYPYIC 139


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 4   YQFLCN 9
           Y F+CN
Sbjct: 317 YGFICN 322


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 4   YQFLCN 9
           Y F+CN
Sbjct: 317 YGFICN 322


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 4   YQFLCN 9
           Y F+CN
Sbjct: 317 YGFICN 322


>sp|RIR2_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 8 type P

Query: 1  KDIYQFL 7
          KD Y+FL
Sbjct: 50 KDFYRFL 56


>sp|PG073_MONPV|CORE protein OPG073|Monkeypox virus (MPXV)

Query: 1  KDIYQFLCN 9
          KDI+ F C+
Sbjct: 56 KDIFYFKCD 64


>sp|PG073_VARV|CORE protein OPG073|Variola virus

Query: 1  KDIYQFLCN 9
          KDI+ F C+
Sbjct: 56 KDIFYFKCD 64


>sp|PG073_VAR67|CORE protein OPG073|Variola virus (isolate Human/India/Ind3/1967)

Query: 1  KDIYQFLCN 9
          KDI+ F C+
Sbjct: 56 KDIFYFKCD 64


>sp|PG073_VACCC|CORE protein OPG073|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  KDIYQFLCN 9
          KDI+ F C+
Sbjct: 56 KDIFYFKCD 64


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    KDIYQFLC 8
            KD++ ++C
Sbjct: 1978 KDVWDWIC 1985


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    KDIYQFLC 8
            KD++ ++C
Sbjct: 1978 KDVWDWIC 1985


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1    KDIYQFLC 8
            KD++ ++C
Sbjct: 1978 KDVWDWIC 1985


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1    KDIYQFLC 8
            KD++ ++C
Sbjct: 1978 KDVWDWIC 1985


>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5

Query: 3   IYQFLC 8
           +Y FLC
Sbjct: 420 VYLFLC 425


>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2

Query: 3   IYQFLC 8
           +Y FLC
Sbjct: 420 VYLFLC 425


>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)

Query: 3   IYQFLC 8
           IY++LC
Sbjct: 239 IYRYLC 244


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 1    KDIYQFLC 8
            KD++ ++C
Sbjct: 1976 KDVWDWVC 1983




88|Sequence|436|445|FLCNASEREV

>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   CNASERE 9
           CN SER+
Sbjct: 324 CNISERD 330


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 3    CNASEREV 10
            CN  +RE+
Sbjct: 1184 CNRDKREI 1191


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 3    CNASEREV 10
            CN  +RE+
Sbjct: 1184 CNRDKREI 1191


>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)

Query: 1  FLCNASERE 9
          FLC+  +RE
Sbjct: 90 FLCDIFDRE 98


>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann

Query: 1  FLCNASERE 9
          FLC+  +RE
Sbjct: 90 FLCDIFDRE 98


>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 1  FLCNASERE 9
          FLC+  +RE
Sbjct: 90 FLCDIFDRE 98


>sp|NSP1A_ROTGI|NON-STRUCTURAL protein 1, peptide 1|Rotavirus B (isolate RVB/Rat/United

Query: 1  FLCNASERE 9
          +LCN  +RE
Sbjct: 64 YLCNKFKRE 72


>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   CNASERE 9
           CN SE++
Sbjct: 331 CNISEKQ 337


>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   LCNASERE 9
           +CN  E+E
Sbjct: 617 ICNEMEKE 624


>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2  LCNASE 7
          +CNA+E
Sbjct: 26 ICNAAE 31


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1    FLCNAS 6
            ++CNAS
Sbjct: 5018 YVCNAS 5023




89|Sequence|441|450|SEREVAAFSN

>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   EREVAAFSN 10
           E+E++ +SN
Sbjct: 608 EKEISNYSN 616


>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 3    REVAAFS 9
            REV AFS
Sbjct: 1080 REVRAFS 1086




90|Sequence|446|455|AAFSNGYTAD

>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)

Query: 1   AAFSNGYT 8
           A  SNGYT
Sbjct: 249 AVMSNGYT 256


>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)

Query: 1   AAFSNGYTA 9
           AAF  G+TA
Sbjct: 560 AAFDGGFTA 568


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 2    AFSNGYTA 9
            A +NGYT+
Sbjct: 3173 AMANGYTS 3180


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 2    AFSNGYTA 9
            A +NGYT+
Sbjct: 3173 AMANGYTS 3180


>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)

Query: 1   AAFSNGYTA 9
           AAF  G+TA
Sbjct: 560 AAFDGGFTA 568


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 1    AAFSNGYT 8
            AAF +G+T
Sbjct: 1039 AAFGSGFT 1046


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 1    AAFSNGYT 8
            AAF +G+T
Sbjct: 1041 AAFGSGFT 1048


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 1    AAFSNGYT 8
            AAF +G+T
Sbjct: 1041 AAFGSGFT 1048


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 1    AAFSNGYT 8
            AAF +G+T
Sbjct: 1038 AAFGSGFT 1045


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 1    AAFSNGYT 8
            AAF +G+T
Sbjct: 1046 AAFGSGFT 1053


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    AFSNGYTAD 10
            A   GYT D
Sbjct: 1439 ALMTGYTGD 1447


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2    AFSNGYTAD 10
            A   GYT D
Sbjct: 1439 ALMTGYTGD 1447


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2    AFSNGYTAD 10
            A   GYT D
Sbjct: 1443 ALMTGYTGD 1451


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 2    AFSNGYTAD 10
            A   GYT D
Sbjct: 1444 ALMTGYTGD 1452


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2    AFSNGYTAD 10
            A   GYT D
Sbjct: 1444 ALMTGYTGD 1452


>sp|VL2_HPV39|MINOR capsid protein L2|Human papillomavirus 39

Query: 3   FSNGYTA 9
           FS+GY A
Sbjct: 463 FSDGYVA 469


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2    AFSNGYTAD 10
            A   GYT D
Sbjct: 1439 ALMTGYTGD 1447


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 2    AFSNGYTAD 10
            A   GYT D
Sbjct: 1443 ALMTGYTGD 1451


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    AFSNGYTAD 10
            A   GYT D
Sbjct: 1439 ALMTGYTGD 1447


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2    AFSNGYTAD 10
            A   GYT D
Sbjct: 1443 ALMTGYTGD 1451




91|Sequence|451|460|GYTADHERAY

>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)

Query: 1   GYTADHERAY 10
           GY  DH   Y
Sbjct: 668 GYETDHSAPY 677


>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   GYTADHERAY 10
           GY  DH   Y
Sbjct: 534 GYETDHSAPY 543


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2   YTADHE 7
           YT DHE
Sbjct: 843 YTEDHE 848


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2   YTADHE 7
           YT DHE
Sbjct: 843 YTEDHE 848


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2   YTADHE 7
           YT DHE
Sbjct: 843 YTEDHE 848


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 1   GYTADHERA 9
           GY  D +RA
Sbjct: 443 GYETDEDRA 451


>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)

Query: 3  TADHERAY 10
          TAD  RAY
Sbjct: 19 TADRNRAY 26


>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1

Query: 4   ADHERAY 10
           A+H+R Y
Sbjct: 562 AEHQRVY 568


>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1   GYTADHE 7
           GY AD E
Sbjct: 379 GYAADQE 385


>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)

Query: 2   YTADHERAY 10
           + +D+ER Y
Sbjct: 122 WVSDNERCY 130


>sp|RIR2_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 8 type P

Query: 2  YTADHE 7
          YT+DH+
Sbjct: 9  YTSDHD 14


>sp|HEMA_I82A2|HEMAGGLUTININ A virus (strain A/Camel/Mongolia/1982

Query: 1  GYTADHE 7
          GY AD+E
Sbjct: 90 GYFADYE 96


>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977

Query: 1   GYTADHE 7
           GY AD+E
Sbjct: 110 GYFADYE 116


>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979

Query: 1   GYTADHE 7
           GY AD+E
Sbjct: 110 GYFADYE 116


>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978

Query: 1   GYTADHE 7
           GY AD+E
Sbjct: 110 GYFADYE 116


>sp|HEMA_I83A1|HEMAGGLUTININ A virus (strain A/Chile/1/1983

Query: 1   GYTADHE 7
           GY AD+E
Sbjct: 110 GYFADYE 116


>sp|HEMA_I80AA|HEMAGGLUTININ A virus (strain A/India/6263/1980

Query: 1   GYTADHE 7
           GY AD+E
Sbjct: 110 GYFADYE 116


>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954

Query: 1   GYTADHE 7
           GY AD+E
Sbjct: 110 GYFADYE 116


>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007

Query: 1   GYTADHE 7
           GY AD+E
Sbjct: 110 GYFADYE 116


>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996

Query: 1   GYTADHE 7
           GY AD+E
Sbjct: 110 GYFADYE 116


>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New

Query: 1   GYTADHE 7
           GY AD+E
Sbjct: 110 GYFADYE 116


>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 4   ADHERAY 10
           ADH  AY
Sbjct: 929 ADHAEAY 935


>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 4   ADHERAY 10
           ADH  AY
Sbjct: 929 ADHAEAY 935


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 2    YTADHERAY 10
            +T D ++AY
Sbjct: 4256 FTVDPQKAY 4264


>sp|HEMA_I86A0|HEMAGGLUTININ A virus (strain A/Taiwan/1/1986

Query: 1   GYTADHE 7
           GY AD+E
Sbjct: 110 GYFADYE 116


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 4   ADHERAY 10
           ADH  AY
Sbjct: 928 ADHAEAY 934


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 4   ADHERAY 10
           ADH  AY
Sbjct: 928 ADHAEAY 934


>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996

Query: 1   GYTADHE 7
           GY AD+E
Sbjct: 110 GYFADYE 116


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2    YTADHERAY 10
            +T D ++AY
Sbjct: 4256 FTVDPQKAY 4264




92|Sequence|456|465|HERAYAALQH

>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 3   RAYAALQH 10
           RA+ AL+H
Sbjct: 624 RAWLALEH 631


>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4   AYAALQH 10
           AY  LQH
Sbjct: 293 AYCPLQH 299


>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4   AYAALQH 10
           AY  LQH
Sbjct: 293 AYCPLQH 299


>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4   AYAALQH 10
           AY  LQH
Sbjct: 293 AYCPLQH 299


>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2  ERAYAALQH 10
          ER +  LQH
Sbjct: 86 ERLFELLQH 94


>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   ERAYAALQH 10
           + AY A++H
Sbjct: 834 QEAYRAIRH 842




93|Sequence|461|470|AALQHWTIRG

>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 5   HWTIR 9
           HWTIR
Sbjct: 461 HWTIR 465


>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 5   HWTIR 9
           HWTIR
Sbjct: 461 HWTIR 465


>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann

Query: 5   HWTIR 9
           HWTIR
Sbjct: 461 HWTIR 465


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 5    HWTIRG 10
            +WTIRG
Sbjct: 3097 NWTIRG 3102


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 5    HWTIRG 10
            +WTIRG
Sbjct: 3097 NWTIRG 3102


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 4   QHWTIR 9
           QHWT++
Sbjct: 297 QHWTVQ 302


>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)

Query: 3   LQHWT 7
           L+HWT
Sbjct: 292 LKHWT 296


>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   LQHWT 7
           L+HWT
Sbjct: 292 LKHWT 296


>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)

Query: 3   LQHWT 7
           L+HWT
Sbjct: 292 LKHWT 296


>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate

Query: 6   WTIRG 10
           WTI+G
Sbjct: 142 WTIKG 146


>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41

Query: 4   QHWTI 8
           QHW +
Sbjct: 202 QHWVV 206


>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25

Query: 1  AALQHWTI 8
          A ++HW I
Sbjct: 28 AQIEHWQI 35


>sp|CAP8_ADE05|PRE-HEXON-LINKING protein VIII|Human adenovirus C serotype 5

Query: 2   ALQHWTIRG 10
            + H TIRG
Sbjct: 122 GITHLTIRG 130


>sp|US11_HCMVM|MEMBRANE glycoprotein US11|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 6  WTIRG 10
          WT+RG
Sbjct: 68 WTLRG 72


>sp|US11_HCMVT|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain Towne)

Query: 6  WTIRG 10
          WT+RG
Sbjct: 68 WTLRG 72


>sp|US11_HCMVA|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain AD169)

Query: 6  WTIRG 10
          WT+RG
Sbjct: 68 WTLRG 72


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 4    QHWTIRG 10
            +H T+RG
Sbjct: 1150 EHHTVRG 1156


>sp|VE2_HPV53|REGULATORY protein E2|Human papillomavirus type 53

Query: 3  LQHWTIR 9
          ++ WT+R
Sbjct: 89 MEEWTLR 95




94|Sequence|466|475|WTIRGPEASL

>sp|PB2_I01A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 201 WEINGPESVL 210


>sp|PB2_I01A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 201 WEINGPESVL 210


>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 529 WEINGPESVL 538


>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 536 WEINGPESVL 545


>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 531 WEINGPESVL 540


>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 530 WEINGPESVL 539


>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESVL 546


>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig

Query: 1   WTIRGPEASL 10
           W + GPE+ L
Sbjct: 537 WEVNGPESVL 546


>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977

Query: 1   WTIRGPEASL 10
           W + GPE+ L
Sbjct: 537 WEVNGPESVL 546


>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 1   WTIRGPEASL 10
           W + GPE+ L
Sbjct: 537 WEVNGPESVL 546


>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 1   WTIRGPEASL 10
           W + GPE+ L
Sbjct: 537 WEVNGPESVL 546


>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961

Query: 1   WTIRGPEASL 10
           W + GPE+ L
Sbjct: 537 WEVNGPESVL 546


>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956

Query: 1   WTIRGPEASL 10
           W I GPE+ L
Sbjct: 537 WEINGPESIL 546


>sp|U18_HHV6Z|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (strain Z29)

Query: 1   WTIRGPEAS 9
           WT  GP+A+
Sbjct: 160 WTSDGPDAN 168


>sp|U18_HHV6H|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (HHV-6 variant

Query: 1   WTIRGPEAS 9
           WT  GP+A+
Sbjct: 160 WTSDGPDAN 168


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 1    WTIRGPEAS 9
            W +R P+AS
Sbjct: 2684 WKLRNPDAS 2692


Query: 2    TIRGPEASL 10
            T+RGP A+ 
Sbjct: 1993 TLRGPVATF 2001


Query: 1    WTIRGPE 7
            WT +GPE
Sbjct: 2055 WTWQGPE 2061


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 1    WTIRGPEAS 9
            W +R P+AS
Sbjct: 2684 WKLRNPDAS 2692


Query: 1    WTIRGPEAS 9
            WT +GPE +
Sbjct: 2055 WTWQGPEGN 2063


Query: 2    TIRGPEASL 10
            T+RGP A+ 
Sbjct: 1993 TLRGPVATF 2001


>sp|MATRX_MEASH|MATRIX protein|Measles virus (strain Halle) (MeV)

Query: 1  WTIRGPEASL 10
          W I+GP A +
Sbjct: 12 WDIKGPIAPI 21


>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 3   IRGPEASL 10
           IRGP AS+
Sbjct: 274 IRGPRASV 281


>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   IRGPEASL 10
           IRGP AS+
Sbjct: 274 IRGPRASV 281


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 1    WTIRGPEAS 9
            WT  GPEA+
Sbjct: 2053 WTWEGPEAN 2061


Query: 2    TIRGPEASL 10
            T+RGP A+ 
Sbjct: 1991 TLRGPVATF 1999


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 1    WTIRGPEAS 9
            WT  GPEA+
Sbjct: 2053 WTWEGPEAN 2061


Query: 2    TIRGPEASL 10
            T+RGP A+ 
Sbjct: 1991 TLRGPVATF 1999


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 1    WTIRGPEAS 9
            WT  GPEA+
Sbjct: 2053 WTWEGPEAN 2061


Query: 1    WTIRGPEAS 9
            W IR P A+
Sbjct: 2682 WKIRNPAAA 2690


Query: 2    TIRGPEASL 10
            T+RGP A+ 
Sbjct: 1991 TLRGPVATF 1999


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 1    WTIRGPEAS 9
            WT  GPEA+
Sbjct: 2053 WTWEGPEAN 2061


Query: 1    WTIRGPEAS 9
            W IR P A+
Sbjct: 2682 WKIRNPAAA 2690


Query: 2    TIRGPEASL 10
            T+RGP A+ 
Sbjct: 1991 TLRGPVATF 1999


>sp|VE4_HPV28|PROTEIN E4|Human papillomavirus 28

Query: 1  WTIRGP 6
          WT++GP
Sbjct: 71 WTLQGP 76


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 2    TIRGPEASL 10
            T+RGP A+ 
Sbjct: 1992 TVRGPVATF 2000


>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)

Query: 4   RGPEASL 10
           R PEASL
Sbjct: 534 RDPEASL 540


>sp|VE4_HPV29|PROTEIN E4|Human papillomavirus 29

Query: 1  WTIRGP 6
          WT+ GP
Sbjct: 84 WTVTGP 89


>sp|NCAP_SARS|NUCLEOPROTEIN acute respiratory syndrome coronavirus

Query: 5   GPEASL 10
           GPEASL
Sbjct: 117 GPEASL 122


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 2    TIRGPEASL 10
            T+RGP A+ 
Sbjct: 1991 TLRGPVATF 1999


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 2    TIRGPEASL 10
            T+RGP A+ 
Sbjct: 1991 TLRGPVATF 1999


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 1   WTIRGPEASL 10
           W IR P  +L
Sbjct: 245 WVIRNPGYAL 254


>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)

Query: 1   WTIRGPEASL 10
           WT R P+ + 
Sbjct: 198 WTCRDPDTAF 207




95|Sequence|471|480|PEASLAQLIS

>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 1  PEASLAQLIS 10
          P   LAQLIS
Sbjct: 37 PAGQLAQLIS 46


>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 1    PEASLAQLIS 10
            PE  LAQ+++
Sbjct: 1456 PEPHLAQIVA 1465


>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind

Query: 3   ASLAQLI 9
           ASLAQ+I
Sbjct: 197 ASLAQII 203


>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1

Query: 2   EASLAQLI 9
           EASL Q+I
Sbjct: 466 EASLKQII 473


>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2   EASLAQLIS 10
           EA++A LIS
Sbjct: 772 EATMASLIS 780


>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2   EASLAQLIS 10
           EA++A LIS
Sbjct: 772 EATMASLIS 780


>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2   EASLAQLIS 10
           EA++A LIS
Sbjct: 772 EATMASLIS 780




96|Sequence|476|485|AQLISALRQH

>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 2   QLISALRQH 10
           +L SAL+QH
Sbjct: 527 ELASALKQH 535


>sp|VFLIP_HHV8P|VIRAL FLICE protein|Human herpesvirus 8 type P

Query: 1  AQLISALR 8
          AQLI ALR
Sbjct: 36 AQLIGALR 43


>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)

Query: 1  AQLISALRQ 9
          AQLISA+ +
Sbjct: 42 AQLISAVNK 50


>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)

Query: 1  AQLISALRQ 9
          AQLISA+ +
Sbjct: 42 AQLISAVNK 50


>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)

Query: 1  AQLISALRQ 9
          AQLISA+ +
Sbjct: 42 AQLISAVNK 50


>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   QLISALRQH 10
           QL++ LR H
Sbjct: 773 QLLNELRTH 781


>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African

Query: 1  AQLISALRQ 9
          AQLISA+ +
Sbjct: 42 AQLISAVNK 50




97|Sequence|481|490|ALRQHRRNDV

>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 3   RQHRRNDV 10
           RQH  NDV
Sbjct: 133 RQHLINDV 140


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1    ALRQHRRND 9
            ALR   RND
Sbjct: 4499 ALRHFDRND 4507


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1    ALRQHRRND 9
            ALR   RND
Sbjct: 4537 ALRHFDRND 4545


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1    ALRQHRRND 9
            ALR   RND
Sbjct: 4587 ALRHFDRND 4595


>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002

Query: 3   RQHRRND 9
           R H RND
Sbjct: 501 RSHLRND 507


>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 3   RQHRRND 9
           R H RND
Sbjct: 504 RSHLRND 510


>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3   RQHRRND 9
           R H RND
Sbjct: 501 RSHLRND 507


>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3   RQHRRND 9
           R H RND
Sbjct: 485 RSHLRND 491


>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|PA_I01A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3  RQHRRND 9
          R H RND
Sbjct: 31 RSHLRND 37


>sp|PA_I01A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3  RQHRRND 9
          R H RND
Sbjct: 31 RSHLRND 37


>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 3   RQHRRND 9
           R H RND
Sbjct: 508 RSHLRND 514


>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   ALRQHRRN 8
           A+R  RRN
Sbjct: 144 AIRDRRRN 151


>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   ALRQHRRN 8
           A+R  RRN
Sbjct: 144 AIRDRRRN 151


>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47

Query: 4   QHRRNDV 10
           QH R+DV
Sbjct: 212 QHSRSDV 218


>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo

Query: 1   ALRQHRRN 8
           ALRQH ++
Sbjct: 283 ALRQHSKD 290


>sp|IR09_HCMVA|UNCHARACTERIZED protein IRL9|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  ALRQHRRN 8
           LR+HR+N
Sbjct: 22 GLRRHRKN 29


>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)

Query: 1   ALRQHR 6
           ALR+HR
Sbjct: 136 ALRRHR 141


>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   ALRQHRRN 8
           A+R  RRN
Sbjct: 143 AIRDRRRN 150




98|Sequence|486|495|RRNDVVEKIR

>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1   RRNDVVEK 8
           RR+DV+E+
Sbjct: 223 RRHDVLER 230


>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   RRNDVVEK 8
           RR+DV+E+
Sbjct: 223 RRHDVLER 230


>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   RRNDVVEK 8
           RR+DV+E+
Sbjct: 223 RRHDVLER 230


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 3    NDVVEKIR 10
            ND+VE +R
Sbjct: 1541 NDIVEALR 1548


>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain

Query: 2   RNDVVEKIR 10
           RN  +EKI+
Sbjct: 346 RNSTMEKIK 354


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 3    NDVVEKIR 10
            ND + KIR
Sbjct: 2147 NDFITKIR 2154


>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate

Query: 3   NDVVEKIR 10
           NDV EK++
Sbjct: 154 NDVAEKLK 161


>sp|VP7_ROTJ1|OUTER capsid glycoprotein VP7|Rotavirus X (strain

Query: 3   NDVVEKIR 10
           NDV+E  R
Sbjct: 211 NDVIESSR 218


>sp|VP7_ROTB2|OUTER capsid glycoprotein VP7|Rotavirus X (isolate

Query: 3   NDVVEKIR 10
           NDV+E  R
Sbjct: 211 NDVIESSR 218


>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)

Query: 3    NDVVEKI 9
            +DV+EKI
Sbjct: 1041 SDVIEKI 1047


>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain

Query: 3    NDVVEKI 9
            +DV+EKI
Sbjct: 1041 SDVIEKI 1047


>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United

Query: 2   RNDVVEK 8
           RND+V K
Sbjct: 930 RNDIVAK 936




99|Sequence|491|500|VEKIRGLMED

>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1

Query: 5   RGLMED 10
           RGLMED
Sbjct: 622 RGLMED 627


>sp|VIE3_HCMVT|30 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)

Query: 2   EKIRGLMED 10
           EK+R +M+D
Sbjct: 166 EKVRNIMKD 174


>sp|VIE2_HCMVT|VIRAL transcription factor IE2|Human cytomegalovirus (strain Towne)

Query: 2   EKIRGLMED 10
           EK+R +M+D
Sbjct: 335 EKVRNIMKD 343


>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)

Query: 2   EKIRGLMED 10
           EK+R +M+D
Sbjct: 336 EKVRNIMKD 344


>sp|VIE2_HCMVA|VIRAL transcription factor IE2|Human cytomegalovirus (strain AD169)

Query: 2   EKIRGLMED 10
           EK+R +M+D
Sbjct: 336 EKVRNIMKD 344


>sp|IE247_HCMVT|45 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)

Query: 2   EKIRGLMED 10
           EK+R +M+D
Sbjct: 166 EKVRNIMKD 174


>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2

Query: 5   RGLMED 10
           RG+MED
Sbjct: 624 RGVMED 629


>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40

Query: 4   IRGLME 9
           +RGLME
Sbjct: 265 LRGLME 270


>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P

Query: 4   IRGLMED 10
           +RG MED
Sbjct: 759 LRGRMED 765


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 3    KIRGLME 9
            KI+GLM+
Sbjct: 1735 KIQGLMQ 1741




100|Sequence|496|505|GLMEDTTQLE

>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 5   DTTQLE 10
           DTTQL+
Sbjct: 853 DTTQLQ 858


>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese

Query: 4   EDTTQLE 10
           E+TTQL+
Sbjct: 677 EETTQLQ 683




101|Sequence|501|510|TTQLETDKLA

>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain

Query: 1   TTQLETDKLA 10
           +TQLETD  A
Sbjct: 260 STQLETDDYA 269


>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain

Query: 1   TTQLETDKLA 10
           +TQLETD  A
Sbjct: 260 STQLETDDYA 269


>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain

Query: 1   TTQLETDKLA 10
           +TQLETD  A
Sbjct: 260 STQLETDDYA 269


>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)

Query: 1   TTQLETDKLA 10
           +TQLETD  A
Sbjct: 260 STQLETDDYA 269


>sp|U21_HHV7R|U21 glycoprotein|Human herpesvirus 7 (strain RK)

Query: 2  TQLETD 7
          TQ+ETD
Sbjct: 73 TQIETD 78


>sp|U21_HHV7J|U21 glycoprotein|Human herpesvirus 7 (strain JI)

Query: 2  TQLETD 7
          TQ+ETD
Sbjct: 73 TQIETD 78




102|Sequence|506|515|TDKLALPMSP

>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)

Query: 2   DKLALPM 8
           DK+ALP+
Sbjct: 352 DKIALPL 358


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 1    TDKLALPM 8
            TD +ALP+
Sbjct: 1289 TDNIALPI 1296


>sp|CORE5_ADE12|CORE-CAPSID bridging protein|Human adenovirus A serotype 12

Query: 2   DKLALPM 8
           DK+A+P+
Sbjct: 130 DKIAIPL 136




103|Sequence|511|520|LPMSPSPLSP

>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 1   LPMSPSPLSP 10
           +P+SP+P SP
Sbjct: 614 MPISPAPWSP 623


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 1   LPMSPSPLSP 10
           +P+SP+P SP
Sbjct: 614 MPISPAPWSP 623


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 1   LPMSPSPLSP 10
           +P+SP+P SP
Sbjct: 614 MPISPAPWSP 623


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 1   LPMSPSPLSP 10
           +P+SP+P SP
Sbjct: 614 MPISPAPWSP 623


>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)

Query: 1   LPMSPSPLSP 10
           +P+SP+P SP
Sbjct: 614 MPISPAPWSP 623


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 1   LPMSPSPLSP 10
           +P+SP+P SP
Sbjct: 612 MPISPAPWSP 621


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 1   LPMSPSPLSP 10
           LP +PS L+P
Sbjct: 738 LPDTPSTLTP 747


>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)

Query: 1   LPMSPSPLS 9
           +P+S SP+S
Sbjct: 348 VPLSVSPIS 356


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 5    PSPLSP 10
            P+P+SP
Sbjct: 1950 PTPISP 1955


>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)

Query: 1   LPMSPSP 7
           LPM+P P
Sbjct: 399 LPMTPEP 405


>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1

Query: 1   LPMSPSPLSP 10
            PM P+ LSP
Sbjct: 312 FPMVPNKLSP 321


>sp|UL128_HCMVA|UNCHARACTERIZED protein UL128|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3  MSPSPLSP 10
          MSP  L+P
Sbjct: 1  MSPKDLTP 8


>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2   PMSPSPLSP 10
           P +P+P+SP
Sbjct: 698 PRAPTPMSP 706


>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2   PMSPSPLSP 10
           P +P+P+SP
Sbjct: 698 PRAPTPMSP 706


>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 5   PSPLSP 10
           P+PL+P
Sbjct: 572 PTPLAP 577


>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 5   PSPLSP 10
           P+PL+P
Sbjct: 572 PTPLAP 577


>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 5   PSPLSP 10
           P+PL+P
Sbjct: 572 PTPLAP 577




104|Sequence|516|525|SPLSPSPIPS

>sp|UL11P_HCMVA|PROTEIN UL11|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   SPLSPSP 7
           +PL PSP
Sbjct: 217 TPLQPSP 223


>sp|POXIN_VACCC|POXIN virus (strain Copenhagen) (VACV)

Query: 1   SPLSPSPI 8
           S LSP PI
Sbjct: 149 STLSPGPI 156


>sp|POXIN_VACCA|POXIN virus (strain Ankara) (VACV)

Query: 1   SPLSPSPI 8
           S LSP PI
Sbjct: 149 STLSPGPI 156


>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   LSPSPIP 9
           L+P+PIP
Sbjct: 368 LTPAPIP 374


Query: 4   SPSPIPS 10
           SP P+P+
Sbjct: 215 SPGPMPA 221


>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   LSPSPIP 9
           L+P+PIP
Sbjct: 368 LTPAPIP 374


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   LSPSPIP 9
           L+P+PIP
Sbjct: 373 LTPAPIP 379


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1   SPLSPS 6
           SPLSPS
Sbjct: 461 SPLSPS 466


>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)

Query: 2   PLSPSPI 8
           PLS SPI
Sbjct: 349 PLSVSPI 355


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   LSPSPIP 9
           + PSPIP
Sbjct: 373 MGPSPIP 379


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   LSPSPIP 9
           L+P PIP
Sbjct: 374 LTPPPIP 380


>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   SPLSPSP 7
           +PL PSP
Sbjct: 214 TPLQPSP 220


>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2

Query: 3  LSPSPIPS 10
          LSP+PIP 
Sbjct: 7  LSPTPIPK 14


>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5

Query: 2  PLSPSPIPS 10
          P +PSP PS
Sbjct: 66 PRTPSPRPS 74


>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2

Query: 3  LSPSPIPS 10
          LSP+PIP 
Sbjct: 7  LSPTPIPK 14


>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 3  LSPSPIPS 10
          LSP+PIP 
Sbjct: 7  LSPTPIPK 14


>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   SPLSPSPI 8
           SP++P P+
Sbjct: 589 SPIAPVPV 596


>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2

Query: 2  PLSPSPIPS 10
          P +PSP PS
Sbjct: 66 PRTPSPRPS 74


>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus

Query: 1   SPLSPSPIP 9
           +P  PSP+P
Sbjct: 197 TPDDPSPVP 205


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2    PLSPSPIPS 10
            P +PSP P+
Sbjct: 2069 PCTPSPAPN 2077


>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42

Query: 3   LSPSPIPS 10
           +SP+PI S
Sbjct: 195 VSPAPISS 202


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    PLSPSPIPS 10
            P +PSP P+
Sbjct: 2069 PCTPSPAPN 2077


>sp|NEC2_HHV11|NUCLEAR egress protein 2|Human herpesvirus 1 (strain 17)

Query: 2  PLSPSPIPS 10
          P SPS +PS
Sbjct: 40 PYSPSSLPS 48


>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   SPLSPSPI 8
           SP++P P+
Sbjct: 591 SPIAPVPV 598


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    PLSPSPIPS 10
            P +PSP P+
Sbjct: 2069 PCTPSPAPN 2077


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2    PLSPSPIPS 10
            P +PSP P+
Sbjct: 2069 PCTPSPAPN 2077


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    PLSPSPIPS 10
            P +PSP P+
Sbjct: 2069 PCTPSPAPN 2077


>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3   LSPSPIP 9
           + PSPIP
Sbjct: 373 MGPSPIP 379


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    PLSPSPIPS 10
            P +PSP P+
Sbjct: 2069 PCTPSPAPN 2077


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    PLSPSPIPS 10
            P +PSP P+
Sbjct: 2069 PCTPSPAPN 2077


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    PLSPSPIPS 10
            P +PSP P+
Sbjct: 2069 PCAPSPAPN 2077


>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3   LSPSPIP 9
           L+P+PIP
Sbjct: 373 LTPAPIP 379


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    PLSPSPIPS 10
            P +PSP P+
Sbjct: 2069 PCTPSPAPN 2077




105|Sequence|521|530|SPIPSPNAKL

>sp|TOP1_VAR67|DNA topoisomerase 1|Variola virus (isolate Human/India/Ind3/1967)

Query: 1   SPIPSP 6
           SP+PSP
Sbjct: 243 SPLPSP 248


>sp|TOP1_VACCC|DNA topoisomerase 1B|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   SPIPSP 6
           SP+PSP
Sbjct: 243 SPLPSP 248


>sp|TOP1_VACCA|DNA topoisomerase 1B|Vaccinia virus (strain Ankara) (VACV)

Query: 1   SPIPSP 6
           SP+PSP
Sbjct: 243 SPLPSP 248


>sp|TOP1_MONPV|DNA topoisomerase I|Monkeypox virus (MPXV)

Query: 1   SPIPSP 6
           SP+PSP
Sbjct: 243 SPLPSP 248


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 2    PIPSPNAKL 10
            PIP+PN K 
Sbjct: 2072 PIPAPNYKF 2080


Query: 2    PIPSPNAK 9
            P+PSP  K
Sbjct: 2320 PVPSPRRK 2327


>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5

Query: 1   SPIPSPNAKL 10
           +P PSPN +L
Sbjct: 404 TPAPSPNCRL 413


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 2    PIPSPNAK 9
            PIP+PN K
Sbjct: 2076 PIPAPNYK 2083


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1    SPIPSPNAKL 10
            +P+P+PN K 
Sbjct: 2071 TPLPAPNYKF 2080


>sp|SPIKE_ADE15|FIBER protein|Human adenovirus D serotype 15

Query: 1   SPIPSPNAKL 10
           +P PSPN K+
Sbjct: 185 TPDPSPNCKI 194


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 2    PIPSPNAK 9
            P+P+PN K
Sbjct: 2077 PVPAPNYK 2084


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 1    SPIPSPNA 8
            +PIP+P A
Sbjct: 1758 TPIPTPRA 1765


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 2    PIPSPNAK 9
            PIP PN K
Sbjct: 2074 PIPEPNYK 2081


>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a

Query: 1   SPIPSPNA 8
           SP+P+P A
Sbjct: 223 SPVPAPVA 230


>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P

Query: 1   SPIPSPN 7
           SP+P P+
Sbjct: 168 SPVPGPD 174


>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985

Query: 1   SPIPSPNAK 9
           S +PSP A+
Sbjct: 221 SFVPSPGAR 229


>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985

Query: 1   SPIPSPNAK 9
           S +PSP A+
Sbjct: 221 SFVPSPGAR 229


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    SPIPSPN 7
            +P+P+PN
Sbjct: 2071 TPLPAPN 2077


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1    SPIPSPN 7
            +P+P+PN
Sbjct: 2071 TPLPAPN 2077


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 2    PIPSPNAKL 10
            PIP+P   L
Sbjct: 1756 PIPAPRTSL 1764


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1    SPIPSPN 7
            +P PSPN
Sbjct: 2077 TPCPSPN 2083


>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)

Query: 1   SPIPSPN 7
           S IP+PN
Sbjct: 696 SHIPAPN 702


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 2    PIPSPN 7
            PIP PN
Sbjct: 2073 PIPEPN 2078


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 2    PIPSPNA 8
            P+P+P A
Sbjct: 1704 PVPAPRA 1710


>sp|SPIKE_ADE02|FIBER protein|Human adenovirus C serotype 2

Query: 1   SPIPSPNAKL 10
           +P PSPN ++
Sbjct: 404 TPDPSPNCRI 413


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2    PIPSPNAK 9
            P+P P A+
Sbjct: 1838 PVPKPRAR 1845


>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4

Query: 1   SPIPSPNAKL 10
           +P PSPN ++
Sbjct: 252 TPDPSPNCQI 261


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 1    SPIPSPNAKL 10
            SP+ +PN  L
Sbjct: 1775 SPLRAPNYNL 1784


>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)

Query: 2   PIPSPNA 8
           PIP+P A
Sbjct: 428 PIPAPRA 434


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2    PIPSPNAKL 10
            PIP+P  ++
Sbjct: 1824 PIPAPRTRV 1832


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2    PIPSPNAKL 10
            P P+PN K 
Sbjct: 2073 PAPAPNYKF 2081


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 1    SPIPSPNAK 9
            +PIP+P  +
Sbjct: 1779 APIPAPRKR 1787


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 1    SPIPSPNAK 9
            +PIP+P  +
Sbjct: 1779 APIPAPRKR 1787


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 1    SPIPSPNAK 9
            +PIP P  K
Sbjct: 1743 NPIPPPRPK 1751


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 2    PIPSPN 7
            P+P PN
Sbjct: 2070 PVPEPN 2075


>sp|PKG3_ADE02|PACKAGING protein 3|Human adenovirus C serotype 2

Query: 1  SPIPSPNA 8
          +P PSP A
Sbjct: 26 APSPSPTA 33


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2    PIPSPNAKL 10
            P P+PN K 
Sbjct: 2073 PAPAPNYKF 2081


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2    PIPSPNAKL 10
            P P+PN K+
Sbjct: 2076 PKPAPNFKI 2084


>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   SPIPSP 6
           SPIP P
Sbjct: 159 SPIPDP 164


>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)

Query: 3   IPSPNAKL 10
           +P PN+K+
Sbjct: 307 VPDPNSKV 314




106|Sequence|526|535|PNAKLENSAL

>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)

Query: 1   PNAKLENS 8
           PNA+ EN+
Sbjct: 556 PNARDENN 563


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 1    PNAKLENSAL 10
            PN KL+N  +
Sbjct: 997  PNNKLKNCVI 1006


>sp|ICP22_VZVO|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1   PNAKLENSAL 10
           PN  L  SAL
Sbjct: 143 PNVPLHRSAL 152


>sp|ICP22_VZVD|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Dumas)

Query: 1   PNAKLENSAL 10
           PN  L  SAL
Sbjct: 143 PNVPLHRSAL 152




107|Sequence|531|540|ENSALLTVEP

>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    ENSALLTVEP 10
            EN  LL V P
Sbjct: 1868 ENGLLLGVHP 1877


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    ENSALLTVEP 10
            EN  LL V P
Sbjct: 1868 ENGLLLGVHP 1877


>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 1   ENSALLTVE 9
           ENS L T+E
Sbjct: 104 ENSCLETIE 112


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    ENSALLTVEP 10
            EN  LL V P
Sbjct: 1868 ENGLLLGVHP 1877


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    ENSALLTVEP 10
            EN  LL V P
Sbjct: 1868 ENGLLLGVHP 1877


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    ENSALLTVEP 10
            EN  LL V P
Sbjct: 1868 ENGLLLGVHP 1877


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    ENSALLTVEP 10
            EN  LL V P
Sbjct: 1702 ENGLLLGVHP 1711


>sp|RP35_VACCT|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Tian Tan)

Query: 1  ENSALLTVEP 10
          ENS ++ +EP
Sbjct: 7  ENSIVVELEP 16


>sp|RP35_VACCC|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  ENSALLTVEP 10
          ENS ++ +EP
Sbjct: 7  ENSIVVELEP 16


>sp|RP35_MONPV|DNA-DIRECTED RNA polymerase 35 kDa|Monkeypox virus (MPXV)

Query: 1  ENSALLTVEP 10
          ENS ++ +EP
Sbjct: 7  ENSIVVELEP 16


>sp|RP35_VAR67|DNA-DIRECTED RNA polymerase 35 kDa|Variola virus (isolate

Query: 1  ENSALLTVEP 10
          ENS ++ +EP
Sbjct: 7  ENSIVVELEP 16


>sp|RP35_VACCA|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1  ENSALLTVEP 10
          ENS ++ +EP
Sbjct: 7  ENSIVVELEP 16


>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4   ALLTVEP 10
           ALL VEP
Sbjct: 104 ALLLVEP 110


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    ENSALLTVEP 10
            ENS   T++P
Sbjct: 1870 ENSYTTTIKP 1879


>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4   ALLTVEP 10
           ALL VEP
Sbjct: 104 ALLLVEP 110




108|Sequence|536|545|LTVEPSPQDK

>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P

Query: 4   EPSPQ 8
           EPSPQ
Sbjct: 444 EPSPQ 448


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2    TVEPSPQD 9
            ++EPSP++
Sbjct: 1772 SIEPSPEE 1779


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 2    TVEPSPQD 9
            ++EPSP++
Sbjct: 1772 SIEPSPEE 1779


>sp|VP30_EBOZM|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 1  LTVEPSPQD 9
          LTV P+P+D
Sbjct: 62 LTVPPAPKD 70


>sp|VP30_EBOZ5|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 1  LTVEPSPQD 9
          LTV P+P+D
Sbjct: 62 LTVPPAPKD 70


>sp|VP30_EBOSU|TRANSCRIPTIONAL activator VP30|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1  LTVEPSPQD 9
          LTV P+P+D
Sbjct: 62 LTVPPAPKD 70


>sp|UL07_HCMVM|CEACAM1-LIKE protein UL7|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   LTVEPSP 7
           LTV+P P
Sbjct: 133 LTVKPKP 139


>sp|UL07_HCMVA|CEACAM1-LIKE protein UL7|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   LTVEPSP 7
           LTV+P P
Sbjct: 133 LTVKPKP 139


>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 4  EPSPQD 9
          +PSPQ+
Sbjct: 74 DPSPQE 79


>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 4  EPSPQD 9
          +PSPQ+
Sbjct: 77 DPSPQE 82


>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 4  EPSPQD 9
          +PSPQ+
Sbjct: 77 DPSPQE 82


>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1

Query: 4  EPSPQD 9
          +PSPQ+
Sbjct: 77 DPSPQE 82


>sp|UL08_HCMVA|MEMBRANE protein UL8|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   LTVEPSP 7
           LTV+P P
Sbjct: 133 LTVKPKP 139




109|Sequence|541|550|SPQDKNKGFF

>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)

Query: 2   PQDKNKGF 9
           PQDK KGF
Sbjct: 497 PQDKTKGF 504


>sp|PG079_VARV|PROTEIN OPG079|Variola virus

Query: 1  SPQDKNKGFF 10
          S QD++ G+F
Sbjct: 89 SKQDRSDGYF 98


>sp|PG079_VAR67|PROTEIN OPG079|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1  SPQDKNKGFF 10
          S QD++ G+F
Sbjct: 89 SKQDRSDGYF 98


>sp|PG079_MONPV|PROTEIN OPG079|Monkeypox virus (MPXV)

Query: 1  SPQDKNKGFF 10
          S QD++ G+F
Sbjct: 89 SKQDRSDGYF 98


>sp|PG079_VACCC|PROTEIN OPG079|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  SPQDKNKGFF 10
          S QD++ G+F
Sbjct: 89 SKQDRSDGYF 98


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 1    SPQDKNKGF 9
            +P DK+ GF
Sbjct: 2088 TPADKSSGF 2096


>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)

Query: 2   PQDKNKGFF 10
           P D  KGF 
Sbjct: 417 PHDAGKGFL 425


>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)

Query: 2   PQDKNKGFF 10
           P D  KGF 
Sbjct: 417 PHDAGKGFL 425


>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)

Query: 2   PQDKNKGFF 10
           P D  KGF 
Sbjct: 417 PHDAGKGFL 425


>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 1   SPQDKNK 7
           +P+DKNK
Sbjct: 329 TPRDKNK 335


>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 1   SPQDKNK 7
           +P+DKNK
Sbjct: 329 TPRDKNK 335


>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 2   PQDKNKG 8
           P D+N+G
Sbjct: 714 PNDRNQG 720


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 2   PQDKNK 7
           PQD+N+
Sbjct: 166 PQDRNR 171


>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3

Query: 1   SPQDKNK 7
           +P+DKNK
Sbjct: 329 TPRDKNK 335


>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3

Query: 1   SPQDKNK 7
           +P+DKNK
Sbjct: 329 TPRDKNK 335


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2  PQDKNK 7
          PQ KNK
Sbjct: 7  PQKKNK 12


>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3

Query: 1   SPQDKNK 7
           +P+DKNK
Sbjct: 329 TPRDKNK 335


>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3

Query: 1   SPQDKNK 7
           +P+DKNK
Sbjct: 329 TPRDKNK 335


>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 2   PQDKNKG 8
           PQD  KG
Sbjct: 245 PQDMGKG 251


>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 2   PQDKNKG 8
           PQD  KG
Sbjct: 245 PQDMGKG 251


>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)

Query: 1   SPQDKNKG 8
           SP+ +NKG
Sbjct: 294 SPRSQNKG 301


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 5   KNKGFF 10
           KN+GF+
Sbjct: 828 KNRGFY 833


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 4    DKNKG 8
            DKNKG
Sbjct: 1605 DKNKG 1609


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 4    DKNKG 8
            DKNKG
Sbjct: 1605 DKNKG 1609


>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka vaccine)

Query: 4   DKNKGFF 10
           DKN  FF
Sbjct: 285 DKNTNFF 291


>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)

Query: 4   DKNKGFF 10
           DKN  FF
Sbjct: 285 DKNTNFF 291


>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)

Query: 2   PQDKNKG 8
           P+D N G
Sbjct: 199 PEDSNSG 205


>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   PQDKNK 7
           PQ KNK
Sbjct: 270 PQKKNK 275




110|Sequence|546|555|NKGFFVDESE

>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)

Query: 2   KGFFVDE 8
           +GF VDE
Sbjct: 191 RGFLVDE 197


>sp|A40_VACCC|PROTEIN A40|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   KGFFVDESE 10
           +G++V ESE
Sbjct: 110 RGYWVGESE 118


>sp|PG189_VACCC|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   NKGFFVDESE 10
           N GF++D  +
Sbjct: 158 NHGFYIDAED 167


>sp|PG189_VARV|ANKYRIN repeat protein OPG189|Variola virus

Query: 1   NKGFFVD 7
           N GF++D
Sbjct: 158 NHGFYID 164


>sp|PG189_VAR67|ANKYRIN repeat protein OPG189|Variola virus (isolate Human/India/Ind3/1967)

Query: 1   NKGFFVD 7
           N GF++D
Sbjct: 158 NHGFYID 164


>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)

Query: 2   KGFFVDE 8
           +G FVDE
Sbjct: 285 EGMFVDE 291


>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus

Query: 1   NKGFFVDESE 10
           NK   +DE E
Sbjct: 152 NKAVVIDEKE 161


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 2    KGFFVDESE 10
            KG F D+S+
Sbjct: 1031 KGLFHDDSK 1039


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 2    KGFFVDESE 10
            KG F D+S+
Sbjct: 1031 KGLFHDDSK 1039


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 2    KGFFVDESE 10
            KG F D+S+
Sbjct: 1031 KGLFHDDSK 1039


>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4

Query: 1   NKGFFVDESE 10
           + G F DE+E
Sbjct: 114 DSGIFEDEAE 123


>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65

Query: 1   NKGFFVDESE 10
           + G F DE+E
Sbjct: 113 DSGIFEDEAE 122


>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)

Query: 2   KGFFVDE 8
           +G F+DE
Sbjct: 284 EGMFIDE 290


>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)

Query: 2   KGFFVDE 8
           +G F+DE
Sbjct: 284 EGMFIDE 290


>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 2   KGFFVDE 8
           +G F+DE
Sbjct: 284 EGMFIDE 290




111|Sequence|551|560|VDESEPLLRC

>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 2    DESEPLLR 9
            D+SEP+L+
Sbjct: 1259 DDSEPVLK 1266


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 2    DESEPLLR 9
            D+SEP+L+
Sbjct: 1241 DDSEPVLK 1248


>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1   VDESEPLLRC 10
           VD S P  RC
Sbjct: 624 VDTSPPYCRC 633


>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   VDESEPLLRC 10
           VD S P  RC
Sbjct: 624 VDTSPPYCRC 633


>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   VDESEPLLRC 10
           VD S P  RC
Sbjct: 624 VDTSPPYCRC 633


>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)

Query: 2   DESEPL 7
           D+SEPL
Sbjct: 177 DKSEPL 182


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 1    VDESEPLL 8
            V ESEP+L
Sbjct: 1852 VTESEPVL 1859


>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /

Query: 5   EPLLRC 10
           EPLL C
Sbjct: 541 EPLLAC 546


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 1    VDESEPLL 8
            V ESEP+L
Sbjct: 1854 VTESEPVL 1861


>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)

Query: 2   DESEPLLRC 10
           DE  P LRC
Sbjct: 131 DEIAPPLRC 139


>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)

Query: 2   DESEPLLRC 10
           DE  P LRC
Sbjct: 121 DEIAPHLRC 129


>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United

Query: 1  VDESEPLLRC 10
          +DE   L+RC
Sbjct: 69 IDELFTLIRC 78


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 1   VDESEPL 7
           VDE+ PL
Sbjct: 524 VDENNPL 530


>sp|MB43_HHV11|MEMBRANE protein UL43|Human herpesvirus 1 (strain 17)

Query: 1  VDESEPLLRC 10
          VD+  P L C
Sbjct: 19 VDDGRPHLAC 28


>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United

Query: 1   VDESEPLLRC 10
           VDE + LL C
Sbjct: 413 VDELKGLLDC 422


>sp|PHOSP_RABVD|PHOSPHOPROTEIN virus (strain China/DRV) (RABV)

Query: 2   DESEPLLRC 10
           DES+  LRC
Sbjct: 253 DESKLPLRC 261




112|Sequence|556|565|PLLRCDSTSS

>sp|US02_HCMVT|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1   PLLRCDSTSS 10
           P LR D TSS
Sbjct: 135 PELRVDYTSS 144


>sp|US02_HCMVM|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain Merlin)

Query: 1   PLLRCDSTSS 10
           P LR D TSS
Sbjct: 135 PELRVDYTSS 144


>sp|US02_HCMVA|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   PLLRCDSTSS 10
           P LR D TSS
Sbjct: 135 PELRVDYTSS 144


>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)

Query: 2   LLRCDSTS 9
           +++CDSTS
Sbjct: 401 IIKCDSTS 408


>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   LLRCDSTS 9
           +++CDSTS
Sbjct: 401 IIKCDSTS 408


>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1   PLLRCD 6
           P+LRCD
Sbjct: 202 PVLRCD 207


>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus

Query: 1   PLLRCDS 7
           PL+ CDS
Sbjct: 757 PLVVCDS 763


>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate

Query: 1   PLLRCDS 7
           PL+ CDS
Sbjct: 757 PLVVCDS 763


>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   PLLRCDS 7
           PL+ CDS
Sbjct: 757 PLVVCDS 763


>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 1   PLLRCDS 7
           PL+ CDS
Sbjct: 757 PLVVCDS 763


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1    PLLRCDSTS 9
            PLL CD  S
Sbjct: 2464 PLLYCDGHS 2472


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 1    PLLRCDSTS 9
            PLL CD  S
Sbjct: 2437 PLLYCDGHS 2445


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 1    PLLRCDSTS 9
            PLL CD  S
Sbjct: 2442 PLLYCDGHS 2450


>sp|V_PIV5|NON-STRUCTURAL protein V|Parainfluenza virus 5 (strain W3)

Query: 1   PLLRCDSTSS 10
           PLL  DST S
Sbjct: 101 PLLGLDSTPS 110


>sp|PHOSP_PIV5|PHOSPHOPROTEIN virus 5 (strain W3)

Query: 1   PLLRCDSTSS 10
           PLL  DST S
Sbjct: 101 PLLGLDSTPS 110


>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29

Query: 5   CDSTS 9
           CDSTS
Sbjct: 291 CDSTS 295




113|Sequence|561|570|DSTSSGSSAL

 ***** No hits found ******


114|Sequence|566|575|GSSALSRNGS

>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 1   GSSALSR 7
           GSS LSR
Sbjct: 439 GSSGLSR 445


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 1   GSSALSR 7
           GSS LSR
Sbjct: 450 GSSGLSR 456


>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H

Query: 1   GSSALSR 7
           GSS LSR
Sbjct: 450 GSSGLSR 456


>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H

Query: 1   GSSALSR 7
           GSS LSR
Sbjct: 450 GSSGLSR 456


>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G

Query: 1   GSSALSR 7
           GSS LSR
Sbjct: 449 GSSGLSR 455


>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G

Query: 1   GSSALSR 7
           GSS LSR
Sbjct: 449 GSSGLSR 455




115|Sequence|571|580|SRNGSFITKE

>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1    SRNGSFITKE 10
            +RNG FI+ E
Sbjct: 6590 ARNGVFISTE 6599


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1    SRNGSFITKE 10
            +RNG FI+ E
Sbjct: 6640 ARNGVFISTE 6649


>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 3   NGSFITKE 10
           NG+FIT E
Sbjct: 258 NGTFITNE 265


>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 3   NGSFITKE 10
           NG+FIT E
Sbjct: 258 NGTFITNE 265


>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 3   NGSFITKE 10
           NG+FIT E
Sbjct: 258 NGTFITNE 265


>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 3   NGSFITKE 10
           NG+FIT E
Sbjct: 258 NGTFITNE 265


>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 3   NGSFITKE 10
           NG+FIT E
Sbjct: 258 NGTFITNE 265


>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 3   NGSFITKE 10
           NG+FIT E
Sbjct: 258 NGTFITNE 265


>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United

Query: 3   NGSFITKE 10
           NG+FIT E
Sbjct: 258 NGTFITNE 265


>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 3   NGSFITKE 10
           NG+FIT E
Sbjct: 258 NGTFITNE 265


>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 3   NGSFITKE 10
           NG+FIT E
Sbjct: 258 NGTFITNE 265


>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate

Query: 3   NGSFITKE 10
           NG+FIT E
Sbjct: 258 NGTFITNE 265


>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 3   NGSFITKE 10
           NG+FIT E
Sbjct: 258 NGTFITNE 265


>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United

Query: 3   NGSFITKE 10
           NG+FIT E
Sbjct: 258 NGTFITNE 265


>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 3   NGSFITKE 10
           NG+FIT E
Sbjct: 258 NGTFITNE 265


>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 3   NGSFITKE 10
           NG+FIT E
Sbjct: 258 NGTFITNE 265


>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b

Query: 1   SRNGSFITKE 10
           +RNGS+ T++
Sbjct: 455 TRNGSYYTQD 464


>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5

Query: 1   SRNGSFITKE 10
           +RNGS+ T++
Sbjct: 455 TRNGSYYTQD 464


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1    SRNGSFIT 8
            +RNG FI+
Sbjct: 6610 ARNGVFIS 6617


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2   RNGSFI 7
           +NGSFI
Sbjct: 907 KNGSFI 912


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 2   RNGSFI 7
           +NGSFI
Sbjct: 907 KNGSFI 912


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2   RNGSFI 7
           +NGSFI
Sbjct: 907 KNGSFI 912


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 2   RNGSFI 7
           +NGSFI
Sbjct: 907 KNGSFI 912


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 2   RNGSFI 7
           +NGSFI
Sbjct: 907 KNGSFI 912


Query: 4    GSFITK 9
            GS+ITK
Sbjct: 2815 GSYITK 2820


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 2   RNGSFI 7
           +NGSFI
Sbjct: 907 KNGSFI 912


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 2   RNGSFI 7
           +NGSFI
Sbjct: 907 KNGSFI 912


>sp|PG189_VARV|ANKYRIN repeat protein OPG189|Variola virus

Query: 1   SRNGSFI 7
           ++NGSFI
Sbjct: 94  NKNGSFI 100


>sp|PG189_VAR67|ANKYRIN repeat protein OPG189|Variola virus (isolate Human/India/Ind3/1967)

Query: 1   SRNGSFI 7
           ++NGSFI
Sbjct: 94  NKNGSFI 100


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 2   RNGSFI 7
           +NGSFI
Sbjct: 907 KNGSFI 912


Query: 4    GSFITK 9
            GS+ITK
Sbjct: 2815 GSYITK 2820


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 2   RNGSFI 7
           +NGSFI
Sbjct: 907 KNGSFI 912


>sp|PG189_VACCC|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   SRNGSFI 7
           ++NGSFI
Sbjct: 94  NKNGSFI 100


>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)

Query: 2   RNGSFI 7
           +NGSFI
Sbjct: 907 KNGSFI 912


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 1    SRNGSFITKE 10
            SR GSF+  E
Sbjct: 1578 SREGSFLRFE 1587


>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 2   RNGSFITK 9
           RNG F  K
Sbjct: 411 RNGDFTNK 418


>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996

Query: 3   NGSFITKE 10
           NG+FI  E
Sbjct: 260 NGNFIAPE 267


>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959

Query: 3   NGSFITKE 10
           NG+FI  E
Sbjct: 260 NGNFIAPE 267


>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)

Query: 2   RNGSFITK 9
           RN +F+T+
Sbjct: 512 RNANFLTR 519


>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005

Query: 3   NGSFITKE 10
           NG+FI  E
Sbjct: 260 NGNFIAPE 267


>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong

Query: 3   NGSFITKE 10
           NG+FI  E
Sbjct: 260 NGNFIAPE 267


>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 3   NGSFITKE 10
           NG+FI  E
Sbjct: 260 NGNFIAPE 267


>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 3   NGSFITKE 10
           NG+FI  E
Sbjct: 249 NGNFIAPE 256


>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong

Query: 3   NGSFITKE 10
           NG+FI  E
Sbjct: 260 NGNFIAPE 267


>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003

Query: 3   NGSFITKE 10
           NG+FI  E
Sbjct: 260 NGNFIAPE 267


>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 3   NGSFITKE 10
           NG+FI  E
Sbjct: 252 NGNFIAPE 259


>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky

Query: 3   NGSFITKE 10
           NG+FI  E
Sbjct: 260 NGNFIAPE 267


>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 3   NGSFITKE 10
           NG+FI  E
Sbjct: 260 NGNFIAPE 267


>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea

Query: 3   NGSFITKE 10
           NG+FI  E
Sbjct: 258 NGNFIAPE 265


>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong

Query: 3   NGSFITKE 10
           NG+FI  E
Sbjct: 260 NGNFIAPE 267


>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 3   NGSFITKE 10
           NG+FI  E
Sbjct: 260 NGNFIAPE 267


>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002

Query: 3   NGSFITKE 10
           NG+FI  E
Sbjct: 256 NGNFIAPE 263


>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 3   NGSFITKE 10
           NG+FI  E
Sbjct: 249 NGNFIAPE 256


>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 3   NGSFITKE 10
           NG+FI  E
Sbjct: 249 NGNFIAPE 256




116|Sequence|576|585|FITKEKKDTV

>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)

Query: 2   ITKEKKDTV 10
           I KEK+DTV
Sbjct: 356 IPKEKEDTV 364


>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)

Query: 1   FITKEKKDTV 10
           F+  EK+DT+
Sbjct: 134 FVAGEKRDTL 143


>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)

Query: 2   ITKEKKDTV 10
           +TK K DT+
Sbjct: 272 LTKTKNDTI 280


>sp|PB2S1_I34A1|PB2-S1 A virus (strain A/Puerto

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 179 ITKEKKE 185


>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 178 ITKEKKE 184


>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2   ITKEKKDTV 10
           ITKEKK+ +
Sbjct: 185 ITKEKKEKL 193


>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)

Query: 2  ITKEKKDTV 10
          +TK+K+D V
Sbjct: 48 LTKDKEDKV 56


>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2S1_I18A0|PB2-S1 A virus (strain A/Brevig

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 184 ITKEKKE 190


>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2S1_I96A0|PB2-S1 A virus (strain A/Goose/Guangdong/1/1996

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2   ITKEKKD 8
           ITKEKK+
Sbjct: 185 ITKEKKE 191


>sp|PHOSP_PI3H4|PHOSPHOPROTEIN parainfluenza 3 virus (strain

Query: 2   ITKEKKDT 9
           I KE+KDT
Sbjct: 349 IGKERKDT 356


>sp|FUS_HMPVC|FUSION glycoprotein F0|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 1   FITKEKKDTV 10
           +IT +  DTV
Sbjct: 409 YITNQDADTV 418




117|Sequence|581|590|KKDTVLRQVR

>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 1   KKDTVLRQVR 10
           K DT+++Q+R
Sbjct: 425 KADTLVQQMR 434


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 1   KKDTVLRQVR 10
           K DT+++Q+R
Sbjct: 425 KADTLVQQMR 434


>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   KKDTVLR 7
           KKD V+R
Sbjct: 584 KKDVVIR 590


>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus

Query: 1   KKDTVLR 7
           KKD V+R
Sbjct: 584 KKDVVIR 590


>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   KKDTVLR 7
           KKD V+R
Sbjct: 584 KKDVVIR 590


>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)

Query: 1   KKDTVLR 7
           KKD V+R
Sbjct: 584 KKDVVIR 590


>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)

Query: 1   KKDTVLR 7
           KKD V+R
Sbjct: 584 KKDVVIR 590


>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)

Query: 1   KKDTVLR 7
           KKD V+R
Sbjct: 584 KKDVVIR 590




118|Sequence|586|595|LRQVRLDPCD

>sp|TRX2_HHV8P|TRIPLEX capsid protein 2|Human herpesvirus 8 type P

Query: 1  LRQVRLDPCD 10
          LR  R+DP D
Sbjct: 82 LRLTRMDPSD 91


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 5    RLDPCD 10
            RL+PC+
Sbjct: 4060 RLEPCN 4065


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 5    RLDPCD 10
            RL+PC+
Sbjct: 4085 RLEPCN 4090


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 3    QVRLDPC 9
            +VR +PC
Sbjct: 1052 EVRREPC 1058


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 3    QVRLDPC 9
            +VR +PC
Sbjct: 1052 EVRREPC 1058




119|Sequence|591|600|LDPCDLQPIF

>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus

Query: 1    LDPCDLQPIF 10
            LD  DL+P F
Sbjct: 1153 LDKVDLKPSF 1162


>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate Human/India/Ind3/1967)

Query: 1    LDPCDLQPIF 10
            LD  DL+P F
Sbjct: 1153 LDKVDLKPSF 1162


>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1    LDPCDLQPIF 10
            LD  DL+P F
Sbjct: 1153 LDKVDLKPSF 1162


>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1    LDPCDLQPIF 10
            LD  DL+P F
Sbjct: 1145 LDKVDLKPSF 1154


>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16) (MPXV)

Query: 1    LDPCDLQPIF 10
            LD  DL+P F
Sbjct: 1153 LDKVDLKPSF 1162


>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)

Query: 1    LDPCDLQPIF 10
            LD  DL+P F
Sbjct: 1153 LDKVDLKPSF 1162


>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /

Query: 1    LDPCDLQPIF 10
            LD  DL+P F
Sbjct: 1153 LDKVDLKPSF 1162


>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)

Query: 1    LDPCDLQPIF 10
            LD  DL+P F
Sbjct: 1153 LDKVDLKPSF 1162


>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)

Query: 1    LDPCDLQPIF 10
            LD  DL+P F
Sbjct: 1153 LDKVDLKPSF 1162


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4    CDLQP 8
            CDLQP
Sbjct: 2666 CDLQP 2670


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4    CDLQP 8
            CDLQP
Sbjct: 2666 CDLQP 2670


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 4   CDLQPIF 10
           CD QP++
Sbjct: 195 CDKQPMY 201


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1    LDPCDLQPI 9
            ++P DL PI
Sbjct: 2874 IEPLDLPPI 2882


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    LDPCDLQPI 9
            ++P DL PI
Sbjct: 2874 IEPLDLPPI 2882


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1    LDPCDLQPI 9
            ++P DL PI
Sbjct: 2874 IEPLDLPPI 2882


>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean

Query: 1   LDPCDLQP 8
           ++PC L P
Sbjct: 241 IEPCKLLP 248


>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7

Query: 2   DPCDLQPI 9
           DP DL+ I
Sbjct: 276 DPVDLETI 283


>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P

Query: 1  LDPCDLQ 7
          +DPC +Q
Sbjct: 36 VDPCSIQ 42


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1    LDPCDL 6
            L+PC+L
Sbjct: 6479 LEPCNL 6484


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 3   PCDLQ 7
           PCDL+
Sbjct: 132 PCDLK 136


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 1   LDPCD 5
           L+PCD
Sbjct: 233 LEPCD 237


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 4    CDLQP 8
            CDL+P
Sbjct: 2660 CDLEP 2664


>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain

Query: 1    LDPCD 5
            L+PCD
Sbjct: 1713 LNPCD 1717


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 3   PCDLQ 7
           PCDL+
Sbjct: 132 PCDLK 136


>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)

Query: 4   CDLQPIF 10
           CD++P F
Sbjct: 699 CDVEPAF 705


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 4    CDLQP 8
            CDL+P
Sbjct: 2675 CDLEP 2679


>sp|PG170_VAR67|PROTEIN OPG170|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   LDPCDLQPI 9
           LDP  ++PI
Sbjct: 101 LDPWTMEPI 109


>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)

Query: 4   CDLQPIF 10
           CD++P F
Sbjct: 699 CDVEPAF 705


>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41

Query: 5   DLQPIF 10
           DL+P+F
Sbjct: 161 DLEPLF 166


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1    LDPCDL 6
            L+PC+L
Sbjct: 6450 LEPCNL 6455


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 3   PCDLQPI 9
           PC+ +P+
Sbjct: 568 PCNTRPV 574


>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)

Query: 3   PCDLQPIF 10
           PC +QP+ 
Sbjct: 249 PCYMQPLL 256


>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3   PCDLQPIF 10
           PC L P+F
Sbjct: 338 PCLLAPMF 345


>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   LDPCDLQP 8
           LDP +++P
Sbjct: 276 LDPPEIEP 283


>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)

Query: 1   LDPCDLQP 8
           LDP +++P
Sbjct: 276 LDPPEIEP 283


>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1

Query: 1   LDPCDLQPIF 10
           L P D +P+ 
Sbjct: 133 LSPADAKPVL 142


>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)

Query: 4   CDLQPIF 10
           C+L P F
Sbjct: 324 CELSPFF 330


>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)

Query: 5  DLQPIF 10
          DLQP F
Sbjct: 61 DLQPAF 66


>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)

Query: 1   LDPCDLQ 7
           L PCD +
Sbjct: 98  LSPCDAE 104


>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)

Query: 4  CDLQPI 9
          CDL P+
Sbjct: 37 CDLDPM 42


>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)

Query: 2   DPCDLQ 7
           D CDLQ
Sbjct: 419 DVCDLQ 424




120|Sequence|596|605|LQPIFDDMLH

>sp|A47_VACCC|PROTEIN A47|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   LQPIFDDML 9
           L PIF D+L
Sbjct: 199 LTPIFSDLL 207


>sp|A47_VACCA|PROTEIN A47|Vaccinia virus (strain Ankara) (VACV)

Query: 1   LQPIFDDML 9
           L PIF D+L
Sbjct: 185 LTPIFSDLL 193


>sp|A47_VARV|PROTEIN A47|Variola virus

Query: 1   LQPIFDDML 9
           L PIF D+L
Sbjct: 199 LTPIFSDLL 207


>sp|A47_VAR67|PROTEIN A47|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   LQPIFDDML 9
           L PIF D+L
Sbjct: 199 LTPIFSDLL 207


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 1    LQPIFDDM 8
            L+PI DD+
Sbjct: 1686 LKPILDDL 1693


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 1    LQPIFDDM 8
            L+PI DD+
Sbjct: 1686 LKPILDDL 1693


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 1    LQPIFDDM 8
            L+PI DD+
Sbjct: 1686 LKPILDDL 1693


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 1    LQPIFDDM 8
            L+PI DD+
Sbjct: 1686 LKPILDDL 1693


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 1    LQPIFDDM 8
            L+PI DD+
Sbjct: 1686 LKPILDDL 1693


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 1    LQPIFDDM 8
            L+PI DD+
Sbjct: 1686 LKPILDDL 1693


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 1    LQPIFDDM 8
            L+PI DD+
Sbjct: 1686 LKPILDDL 1693


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 1    LQPIFDDM 8
            L+PI DD+
Sbjct: 1686 LKPILDDL 1693


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)

Query: 1    LQPIFDDM 8
            L+PI DD+
Sbjct: 1687 LKPILDDL 1694


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 1    LQPIFDDM 8
            L+PI DD+
Sbjct: 1686 LKPILDDL 1693


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 2   QPIFDD 7
           +PIFDD
Sbjct: 950 RPIFDD 955


>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)

Query: 2   QPIFDD 7
           +PIFDD
Sbjct: 951 RPIFDD 956


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 2   QPIFDD 7
           +PIFDD
Sbjct: 971 RPIFDD 976


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)

Query: 1    LQPIFDDM 8
            L+PI DD+
Sbjct: 1686 LKPILDDL 1693


>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 2   QPIFDD 7
           +PIFDD
Sbjct: 952 RPIFDD 957


>sp|ORF11_HHV8P|PROTEIN ORF11|Human herpesvirus 8 type P

Query: 2  QPIFDDMLH 10
          +P++D ++H
Sbjct: 25 EPVWDSVIH 33


>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 5  FDDMLH 10
          +DD+LH
Sbjct: 74 YDDVLH 79


>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 5  FDDMLH 10
          +DD+LH
Sbjct: 74 YDDVLH 79


>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 5  FDDMLH 10
          +DD+LH
Sbjct: 74 YDDVLH 79


>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35

Query: 1   LQPIFD 6
           LQP++D
Sbjct: 496 LQPLYD 501


>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)

Query: 2   QPIFDDM 8
           +P+FD++
Sbjct: 295 EPVFDEI 301




121|Sequence|601|610|DDMLHFLNPE

>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P

Query: 2   DMLHFL 7
           DMLHFL
Sbjct: 491 DMLHFL 496


>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV

Query: 4   LHFLNPE 10
           LH LNPE
Sbjct: 180 LHLLNPE 186


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 2    DMLHFLNPE 10
            DM HF  PE
Sbjct: 1890 DMRHFATPE 1898


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   MLHFLNPE 10
           +LH+LNP+
Sbjct: 953 LLHWLNPK 960


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   MLHFLNPE 10
           +LH+LNP+
Sbjct: 953 LLHWLNPK 960


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   MLHFLNPE 10
           +LH+LNP+
Sbjct: 953 LLHWLNPK 960


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   MLHFLNPE 10
           +LH+LNP+
Sbjct: 953 LLHWLNPK 960


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   MLHFLNPE 10
           +LH+LNP+
Sbjct: 947 LLHWLNPK 954


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   MLHFLNPE 10
           +LH+LNP+
Sbjct: 953 LLHWLNPK 960


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   MLHFLNPE 10
           +LH+LNP+
Sbjct: 953 LLHWLNPK 960


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   MLHFLNPE 10
           +LH+LNP+
Sbjct: 953 LLHWLNPK 960


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   MLHFLNPE 10
           +LH+LNP+
Sbjct: 953 LLHWLNPK 960


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   MLHFLNPE 10
           +LH+LNP+
Sbjct: 953 LLHWLNPK 960


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 1    DDMLHFLNPE 10
            D ++H  NPE
Sbjct: 1083 DRVIHICNPE 1092


>sp|GI_CHV1|ENVELOPE glycoprotein I|Cercopithecine herpesvirus 1 (CeHV-1) (Simian

Query: 4  LHFLNPE 10
          LHFL P+
Sbjct: 56 LHFLGPQ 62


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 1   DDMLHFLNP 9
           DD++++ NP
Sbjct: 347 DDLINYYNP 355


>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)

Query: 1   DDMLHFLNP 9
           +D+L  LNP
Sbjct: 686 EDVLELLNP 694


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1   DDMLHFLNP 9
           DD++++ NP
Sbjct: 347 DDIINYYNP 355


>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)

Query: 3   MLHFLNP 9
           + HF+NP
Sbjct: 623 LAHFINP 629


>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)

Query: 1    DDMLHFLNPE 10
            D ++H  NPE
Sbjct: 992  DRVIHLCNPE 1001


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 2    DMLHFLNP 9
            D  HFL+P
Sbjct: 1773 DEAHFLDP 1780


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 2    DMLHFLNP 9
            D  HFL+P
Sbjct: 1773 DEAHFLDP 1780


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 2    DMLHFLNP 9
            D  HFL+P
Sbjct: 1773 DEAHFLDP 1780


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2    DMLHFLNP 9
            D  HFL+P
Sbjct: 1773 DEAHFLDP 1780


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 2    DMLHFLNP 9
            D  HFL+P
Sbjct: 1773 DEAHFLDP 1780


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 2    DMLHFLNP 9
            D  HFL+P
Sbjct: 1773 DEAHFLDP 1780


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2    DMLHFLNP 9
            D  HFL+P
Sbjct: 1773 DEAHFLDP 1780


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 2    DMLHFLNP 9
            D  HFL+P
Sbjct: 1773 DEAHFLDP 1780


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 2    DMLHFLNP 9
            D  HFL+P
Sbjct: 1773 DEAHFLDP 1780


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 2    DMLHFLNP 9
            D  HFL+P
Sbjct: 1777 DEAHFLDP 1784


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 2    DMLHFLNP 9
            D  HFL+P
Sbjct: 1757 DEAHFLDP 1764


>sp|UL88_HHV7J|PROTEIN U59|Human herpesvirus 7 (strain JI)

Query: 2   DMLHFLN 8
           DM+ FLN
Sbjct: 336 DMIKFLN 342


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 2    DMLHFLN 8
            + LHFLN
Sbjct: 3210 NALHFLN 3216


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 4    LHFLN 8
            LHFLN
Sbjct: 3211 LHFLN 3215


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 4    LHFLN 8
            LHFLN
Sbjct: 3208 LHFLN 3212


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 4    LHFLN 8
            LHFLN
Sbjct: 3203 LHFLN 3207


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 4    LHFLN 8
            LHFLN
Sbjct: 3207 LHFLN 3211


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 4    LHFLN 8
            LHFLN
Sbjct: 3203 LHFLN 3207


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 4    LHFLN 8
            LHFLN
Sbjct: 3212 LHFLN 3216


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 4    LHFLN 8
            LHFLN
Sbjct: 3211 LHFLN 3215


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 4    LHFLN 8
            LHFLN
Sbjct: 3210 LHFLN 3214


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 4    LHFLN 8
            LHFLN
Sbjct: 3210 LHFLN 3214


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 4    LHFLN 8
            LHFLN
Sbjct: 3210 LHFLN 3214


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 4    LHFLN 8
            LHFLN
Sbjct: 3210 LHFLN 3214


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 4    LHFLN 8
            LHFLN
Sbjct: 3201 LHFLN 3205


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 2    DMLHFLNP 9
            D LH L P
Sbjct: 1244 DSLHLLRP 1251


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 2    DMLHFLNP 9
            D LH L P
Sbjct: 1244 DSLHLLRP 1251


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 1    DDMLHFLNP 9
            +D+L  +NP
Sbjct: 1930 NDLLRLINP 1938


>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)

Query: 1   DDMLHFLNP 9
           DD+L  L P
Sbjct: 670 DDVLDLLTP 678


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 1    DDMLHFLNP 9
            +D+L  +NP
Sbjct: 1930 NDLLRLINP 1938


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 1    DDMLHFLNP 9
            +D+L  +NP
Sbjct: 1930 NDLLKLINP 1938


>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)

Query: 2   DMLHFL 7
           DML+FL
Sbjct: 563 DMLYFL 568


>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain

Query: 1   DDMLHFL 7
           DD +HF 
Sbjct: 427 DDFIHFF 433




122|Sequence|606|615|FLNPEELRVI

>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1   FLNPEEL 7
           FLNPE+L
Sbjct: 917 FLNPEKL 923


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 1   FLNPEEL 7
           FLNPE+L
Sbjct: 917 FLNPEKL 923


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1   FLNPEEL 7
           FLNPE+L
Sbjct: 917 FLNPEKL 923


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1   FLNPEEL 7
           FLNPE+L
Sbjct: 917 FLNPEKL 923


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1   FLNPEEL 7
           FLNPE+L
Sbjct: 917 FLNPEKL 923


>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988

Query: 1   FLNPEELR 8
           F+N EELR
Sbjct: 112 FINYEELR 119


>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New

Query: 1   FLNPEELR 8
           F+N EELR
Sbjct: 112 FINYEELR 119


>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967

Query: 1   FLNPEELR 8
           F+N EELR
Sbjct: 112 FINYEELR 119


>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961

Query: 1   FLNPEELR 8
           F+N EELR
Sbjct: 112 FINYEELR 119


>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935

Query: 1   FLNPEELR 8
           F+N EELR
Sbjct: 112 FINYEELR 119


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1  FLNPEE 6
          FLNP+E
Sbjct: 24 FLNPDE 29


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1  FLNPEE 6
          FLNP+E
Sbjct: 24 FLNPDE 29


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1  FLNPEE 6
          FLNP+E
Sbjct: 24 FLNPDE 29


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1  FLNPEE 6
          FLNP+E
Sbjct: 24 FLNPDE 29


>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31

Query: 1   FLNPEELRVI 10
           F NPE  R++
Sbjct: 91  FYNPETQRLV 100


>sp|NEC2_HCMVM|NUCLEAR egress protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2  LNPEELRV 9
          L P ELRV
Sbjct: 21 LGPSELRV 28


>sp|NEC2_HCMVA|NUCLEAR egress protein 2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2  LNPEELRV 9
          L P ELRV
Sbjct: 21 LGPSELRV 28


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1  FLNPEE 6
          FLNP+E
Sbjct: 24 FLNPDE 29


>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52

Query: 1   FLNPEELRVI 10
           F NPE  R++
Sbjct: 119 FYNPETQRLV 128


>sp|GL_HHV6Z|ENVELOPE glycoprotein L|Human herpesvirus 6B (strain Z29)

Query: 3   NPEELRVI 10
           NPE+LR +
Sbjct: 97  NPEQLRTL 104


>sp|GL_HHV6U|ENVELOPE glycoprotein L|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   NPEELRVI 10
           NPE+LR +
Sbjct: 97  NPEQLRTL 104


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 1   FLNPEE 6
           FLNPE+
Sbjct: 914 FLNPEK 919


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1   FLNPEE 6
           FLNPE+
Sbjct: 914 FLNPEK 919


>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2   LNPEELR 8
           L PEELR
Sbjct: 116 LRPEELR 122


>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)

Query: 3   NPEELRVI 10
           +PE++RV+
Sbjct: 951 DPEDVRVV 958


>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)

Query: 3   NPEELRVI 10
           +PE++RV+
Sbjct: 924 DPEDVRVV 931


>sp|E434_ADE09|EARLY E4 34 kDa protein|Human adenovirus D serotype 9

Query: 2  LNPEELRVI 10
          L PEE++++
Sbjct: 75 LTPEEIKIL 83


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 1   FLNPEE 6
           FLNPE+
Sbjct: 914 FLNPEK 919


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 1   FLNPEE 6
           FLNPE+
Sbjct: 914 FLNPEK 919


>sp|UNG_HHV11|URACIL-DNA glycosylase|Human herpesvirus 1 (strain 17)

Query: 1   FLNPEELRVI 10
           +  P+E+RV+
Sbjct: 164 YCTPDEVRVV 173


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1   FLNPEE 6
           FLNPE+
Sbjct: 915 FLNPEK 920


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 1   FLNPEE 6
           FLNPE+
Sbjct: 915 FLNPEK 920


>sp|UL84_HCMVM|PROTEIN UL84|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   LNPEELR 8
           L PEELR
Sbjct: 116 LRPEELR 122


>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66

Query: 1  FLNPEELRVI 10
          F NP++ R++
Sbjct: 89 FYNPDQERLV 98


>sp|UL84_HCMVA|PROTEIN UL84|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   LNPEELR 8
           L PEELR
Sbjct: 116 LRPEELR 122


>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945

Query: 1   FLNPEELR 8
           F N EELR
Sbjct: 112 FTNYEELR 119


>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4  PEELRVI 10
          PE++RV+
Sbjct: 80 PEQVRVV 86


>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4  PEELRVI 10
          PE++RV+
Sbjct: 80 PEQVRVV 86


>sp|ORF4B_MERS1|NON-STRUCTURAL protein ORF4b|Middle East respiratory syndrome-related

Query: 1  FLNPEELRVI 10
           L PE+L VI
Sbjct: 41 LLRPEDLSVI 50


>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United

Query: 1   FLNPEELRVI 10
           F+NP+  RV+
Sbjct: 476 FVNPDTGRVL 485


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 5    EELRVI 10
            EELRVI
Sbjct: 1272 EELRVI 1277


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 5    EELRVI 10
            EELRVI
Sbjct: 1272 EELRVI 1277


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 5    EELRVI 10
            EELRVI
Sbjct: 1272 EELRVI 1277


>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P

Query: 4   PEELRVI 10
           P++LRV+
Sbjct: 650 PDDLRVV 656


>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)

Query: 3   NPEELRVI 10
           NP++LR +
Sbjct: 115 NPDQLRAL 122


>sp|GL_HCMV3|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 2387) (HHV-5)

Query: 3   NPEELRVI 10
           NP++LR +
Sbjct: 115 NPDQLRAL 122


>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)

Query: 3   NPEELRVI 10
           NP++LR +
Sbjct: 115 NPDQLRAL 122


>sp|GL_HCMV6|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5040) (HHV-5)

Query: 3   NPEELRVI 10
           NP++LR +
Sbjct: 115 NPDQLRAL 122


>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)

Query: 3   NPEELRVI 10
           NP++LR +
Sbjct: 115 NPDQLRAL 122


>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)

Query: 3   NPEELRVI 10
           NP++LR +
Sbjct: 115 NPDQLRAL 122


>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   NPEELRVI 10
           NP++LR +
Sbjct: 115 NPDQLRAL 122


>sp|GL_HCMVA|ENVELOPE glycoprotein L|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   NPEELRVI 10
           NP++LR +
Sbjct: 115 NPDQLRAL 122


>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)

Query: 3   NPEELRVI 10
           NP++LR +
Sbjct: 115 NPDQLRAL 122


>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)

Query: 3   NPEELRVI 10
           NP++LR +
Sbjct: 115 NPDQLRAL 122


>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)

Query: 3   NPEELRVI 10
           NP++LR +
Sbjct: 115 NPDQLRAL 122




123|Sequence|611|620|ELRVIEEIPQ

>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)

Query: 1   ELRVIEEIPQ 10
           ELR  EE+P+
Sbjct: 107 ELRCNEEMPK 116


>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 1    ELRVIEEIPQ 10
            E  +IEE+P+
Sbjct: 1508 EADIIEELPE 1517


>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 3  RVIEEIPQ 10
          R+IE IP+
Sbjct: 62 RIIETIPE 69


>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 3  RVIEEIPQ 10
          R+IE IP+
Sbjct: 62 RIIETIPE 69


>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 3  RVIEEIPQ 10
          R+IE IP+
Sbjct: 62 RIIETIPE 69


>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1

Query: 4   VIEEIP 9
           +IEE+P
Sbjct: 391 IIEEVP 396




124|Sequence|616|625|EEIPQAEDKL

>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 3    IPQAEDKL 10
            IPQA DKL
Sbjct: 1164 IPQARDKL 1171


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 3    IPQAEDKL 10
            IPQA DKL
Sbjct: 1164 IPQARDKL 1171


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 3    IPQAEDKL 10
            IPQA DKL
Sbjct: 1162 IPQARDKL 1169


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 3    IPQAEDKL 10
            IPQA DKL
Sbjct: 1162 IPQARDKL 1169


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 3    IPQAEDKL 10
            IPQA DKL
Sbjct: 1161 IPQARDKL 1168


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 3    IPQAEDKL 10
            IPQA DKL
Sbjct: 1161 IPQARDKL 1168


>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)

Query: 1   EEIPQAEDKL 10
           EE+PQ  D++
Sbjct: 932 EELPQIHDRI 941


>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)

Query: 1   EEIPQAEDKL 10
           EE+PQ  D++
Sbjct: 932 EELPQIHDRI 941


>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)

Query: 1   EEIPQAEDKL 10
           EE+PQ  D++
Sbjct: 932 EELPQIHDRI 941


>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 1   EEIPQAEDKL 10
           EE+PQ  D++
Sbjct: 929 EELPQIHDRI 938


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 3    IPQAEDKL 10
            IP+A+DK+
Sbjct: 1162 IPEAKDKV 1169


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 3    IPQAEDKL 10
            IP+A+DK+
Sbjct: 1169 IPEAKDKV 1176


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 1    EEIPQAEDK 9
            EE+PQ  D+
Sbjct: 1671 EEVPQVFDE 1679


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 3    IPQAEDKL 10
            +PQA++KL
Sbjct: 1137 LPQAKEKL 1144


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 3    IPQAEDKL 10
            +PQA +KL
Sbjct: 1136 LPQAREKL 1143


>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain Copenhagen)

Query: 1   EEIPQAEDKL 10
           E++P  +DK+
Sbjct: 223 EDVPNFKDKM 232


>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)

Query: 1   EEIPQAEDKL 10
           E++P  +DK+
Sbjct: 223 EDVPNFKDKI 232




125|Sequence|621|630|AEDKLDRLFE

>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 2    EDKLDRLFE 10
            +DKL+ LF+
Sbjct: 1435 QDKLEALFQ 1443


>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)

Query: 1   AEDKLDRLFE 10
           A+D++  LFE
Sbjct: 141 AQDRIIELFE 150


>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)

Query: 1   AEDKLDRLFE 10
           A+D++  LFE
Sbjct: 141 AQDRIIELFE 150


>sp|PG137_VARV|PROTEIN OPG137|Variola virus

Query: 1   AEDKLDRLFE 10
           +ED++DR+++
Sbjct: 220 SEDEIDRIYK 229


>sp|PG137_VAR67|PROTEIN OPG137|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   AEDKLDRLFE 10
           +ED++DR+++
Sbjct: 220 SEDEIDRIYK 229


>sp|VP6_ROTYO|INTERMEDIATE capsid protein VP6|Rotavirus A (strain

Query: 2   EDKLDRLF 9
           ED L R+F
Sbjct: 379 EDNLQRVF 386


>sp|VP6_ROTWI|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United

Query: 2   EDKLDRLF 9
           ED L R+F
Sbjct: 379 EDNLQRVF 386


>sp|VP6_ROTHW|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United

Query: 2   EDKLDRLF 9
           ED L R+F
Sbjct: 379 EDNLQRVF 386


>sp|VP6_ROTHU|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate

Query: 2   EDKLDRLF 9
           ED L R+F
Sbjct: 379 EDNLQRVF 386


>sp|VP6_ROTHT|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United

Query: 2   EDKLDRLF 9
           ED L R+F
Sbjct: 379 EDNLQRVF 386


>sp|VP6_ROTHP|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United

Query: 2   EDKLDRLF 9
           ED L R+F
Sbjct: 379 EDNLQRVF 386


>sp|VP6_ROTHL|INTERMEDIATE capsid protein VP6|Rotavirus A (strain

Query: 2   EDKLDRLF 9
           ED L R+F
Sbjct: 379 EDNLQRVF 386


>sp|VP6_ROTHK|INTERMEDIATE capsid protein VP6|Rotavirus A (strain

Query: 2   EDKLDRLF 9
           ED L R+F
Sbjct: 379 EDNLQRVF 386


>sp|VP6_ROTHD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United

Query: 2   EDKLDRLF 9
           ED L R+F
Sbjct: 379 EDNLQRVF 386


>sp|VP6_ROTH7|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United

Query: 2   EDKLDRLF 9
           ED L R+F
Sbjct: 379 EDNLQRVF 386


>sp|VP6_ROTH6|INTERMEDIATE capsid protein VP6|Rotavirus A (strain

Query: 2   EDKLDRLF 9
           ED L R+F
Sbjct: 379 EDNLQRVF 386


>sp|VP6_ROTH3|INTERMEDIATE capsid protein VP6|Rotavirus A (strain

Query: 2   EDKLDRLF 9
           ED L R+F
Sbjct: 379 EDNLQRVF 386


>sp|VP6_ROTH1|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate

Query: 2   EDKLDRLF 9
           ED L R+F
Sbjct: 379 EDNLQRVF 386


>sp|VP6_ROTAD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United

Query: 2   EDKLDRLF 9
           ED L R+F
Sbjct: 379 EDNLQRVF 386


>sp|VP6_ROT41|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate

Query: 2   EDKLDRLF 9
           ED L R+F
Sbjct: 379 EDNLQRVF 386


>sp|PG137_VACCC|PROTEIN OPG137|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   AEDKLDRLFE 10
           +ED++DR+++
Sbjct: 219 SEDEIDRIYK 228


>sp|PG137_VACCA|PROTEIN OPG137|Vaccinia virus (strain Ankara) (VACV)

Query: 1   AEDKLDRLFE 10
           +ED++DR+++
Sbjct: 219 SEDEIDRIYK 228


>sp|PG137_MONPV|PROTEIN OPG137|Monkeypox virus (MPXV)

Query: 1   AEDKLDRLFE 10
           +ED++DR+++
Sbjct: 219 SEDEIDRIYK 228


>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   EDKLDRL 8
           ED LD+L
Sbjct: 249 EDSLDKL 255


>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   EDKLDRL 8
           ED LD+L
Sbjct: 249 EDSLDKL 255


>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47

Query: 2  EDKLDRLFE 10
          ED L +LFE
Sbjct: 27 EDDLGQLFE 35


>sp|VPU_HV1A2|PROTEIN Vpu|Human immunodeficiency virus type 1

Query: 4  KLDRLFE 10
          K+DRLF+
Sbjct: 38 KIDRLFD 44




126|Sequence|626|635|DRLFEIIGVK

>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)

Query: 2  RLFEIIGVK 10
          R+F ++GVK
Sbjct: 23 RVFPLVGVK 31


>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 2  RLFEIIGVK 10
          R+F ++GVK
Sbjct: 23 RVFPLVGVK 31


>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 2  RLFEIIGVK 10
          R+F ++GVK
Sbjct: 23 RVFPLVGVK 31


>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 2  RLFEIIGVK 10
          R+F ++GVK
Sbjct: 23 RVFPLVGVK 31


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 2  RLFEIIGVK 10
          R+F ++GVK
Sbjct: 23 RVFPLVGVK 31


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 2  RLFEIIGVK 10
          R+F ++GVK
Sbjct: 23 RVFPLVGVK 31


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 2  RLFEIIGVK 10
          R+F ++GVK
Sbjct: 23 RVFPLVGVK 31


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 2  RLFEIIGVK 10
          R+F ++GVK
Sbjct: 23 RVFPLVGVK 31


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 2  RLFEIIGVK 10
          R+F ++GVK
Sbjct: 23 RVFPLVGVK 31


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 2  RLFEIIGVK 10
          R+F ++GVK
Sbjct: 23 RVFPLVGVK 31


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 1   DRLFEIIGVK 10
           D+LF I+G K
Sbjct: 274 DKLFPIMGEK 283


>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV

Query: 1   DRLFEIIGVK 10
           DR F  IG++
Sbjct: 594 DRFFSHIGIR 603


>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate

Query: 1   DRLFEIIGVK 10
           DR F  IG++
Sbjct: 594 DRFFSHIGIR 603


>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)

Query: 1   DRLFEIIG 8
           DRL E++G
Sbjct: 318 DRLQEVVG 325


>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)

Query: 2   RLFEIIGV 9
           RL+ I+GV
Sbjct: 427 RLYRILGV 434


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 2   RLFEIIGV 9
           RL+ I+GV
Sbjct: 422 RLYRILGV 429


>sp|ORF1_VZVO|STRUCTURAL protein 1|Varicella-zoster virus (strain Oka vaccine)

Query: 1  DRLFEIIGV 9
          DRL  ++GV
Sbjct: 73 DRLCNVLGV 81


>sp|ORF1_VZVD|STRUCTURAL protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1  DRLFEIIGV 9
          DRL  ++GV
Sbjct: 73 DRLCNVLGV 81


>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)

Query: 2   RLFEIIGV 9
           RL+ I+G+
Sbjct: 429 RLYRILGI 436




127|Sequence|631|640|IIGVKSQEAS

>sp|VE7_HPV37|PROTEIN E7|Human papillomavirus 37

Query: 2  IGVKSQE 8
          IG++SQE
Sbjct: 67 IGIRSQE 73


>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b

Query: 1   IIGVKSQEAS 10
           I+G KS EAS
Sbjct: 301 ILGHKSAEAS 310


>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47

Query: 1   IIGVKSQEAS 10
           I+G KS EAS
Sbjct: 300 ILGHKSAEAS 309


>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5

Query: 1   IIGVKSQEAS 10
           I+G KS EAS
Sbjct: 301 ILGHKSAEAS 310


>sp|PG130_MONPV|39KDA core protein OPG130|Monkeypox virus (MPXV)

Query: 2  IGVKSQEA 9
          IG+KSQE+
Sbjct: 39 IGLKSQES 46


>sp|PG130_VACCC|39KDA core protein OPG130|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2  IGVKSQEA 9
          IG+KSQE+
Sbjct: 39 IGLKSQES 46


>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7

Query: 3   GVKSQEA 9
           G+K+QEA
Sbjct: 347 GIKAQEA 353


>sp|PG130_VARV|39KDA core protein OPG130|Variola virus

Query: 2  IGVKSQEA 9
          IG+KSQE+
Sbjct: 39 IGLKSQES 46


>sp|PG130_VAR67|39KDA core protein OPG130|Variola virus (isolate Human/India/Ind3/1967)

Query: 2  IGVKSQEA 9
          IG+KSQE+
Sbjct: 39 IGLKSQES 46


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 4    VKSQEAS 10
            VKSQ+AS
Sbjct: 1967 VKSQDAS 1973


>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20

Query: 1   IIGVKSQEAS 10
           I+G +S EAS
Sbjct: 300 IVGHQSTEAS 309


>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21

Query: 1   IIGVKSQEAS 10
           I+G +S EAS
Sbjct: 298 IVGHQSTEAS 307


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 4    VKSQEAS 10
            +KSQ+AS
Sbjct: 1968 IKSQDAS 1974




128|Sequence|636|645|SQEASQTLLD

>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 2   QEASQTLLD 10
           +EA++ LLD
Sbjct: 337 EEANKVLLD 345


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 2   QEASQTLLD 10
           +EA++ LLD
Sbjct: 337 EEANKVLLD 345


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 2   QEASQTLLD 10
           +EA++ LLD
Sbjct: 337 EEANKVLLD 345


>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3

Query: 1   SQEASQTL 8
           +QEASQ L
Sbjct: 116 AQEASQCL 123


>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 1   SQEASQTL 8
           +QEASQ L
Sbjct: 116 AQEASQCL 123


>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3

Query: 1   SQEASQTL 8
           +QEASQ L
Sbjct: 116 AQEASQCL 123




129|Sequence|641|655|QTLLDSVYSHLPDLL

>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   QTLLDSVYSHLPDLL 15
           QT++D + +  PDL+
Sbjct: 489 QTVIDEIVARTPDLI 503


>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 3   LLDSVYSHLPDLL 15
           LL S ++HL D+L
Sbjct: 259 LLQSAWTHLYDVL 271


>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 3   LLDSVYSHLPDLL 15
           LL S ++HL D+L
Sbjct: 259 LLQSAWTHLYDVL 271


>sp|PG089_VARV|PUTATIVE nuclease OPG089|Variola virus

Query: 4   LDSVYSHLP 12
           LD VYS++P
Sbjct: 302 LDDVYSYIP 310


>sp|PG089_VAR67|PUTATIVE nuclease OPG089|Variola virus (isolate Human/India/Ind3/1967)

Query: 4   LDSVYSHLP 12
           LD VYS++P
Sbjct: 302 LDDVYSYIP 310


>sp|PG089_MONPV|PUTATIVE nuclease OPG089|Monkeypox virus (MPXV)

Query: 4   LDSVYSHLP 12
           LD VYS++P
Sbjct: 302 LDDVYSYIP 310


>sp|UL88_HHV7J|PROTEIN U59|Human herpesvirus 7 (strain JI)

Query: 2   TLLDSVYSH---LPDLL 15
           TLL+S+YS+   LP+++
Sbjct: 258 TLLNSIYSYKTLLPEIV 274


>sp|VE2_HPV10|REGULATORY protein E2|Human papillomavirus type 10

Query: 1  QTLLDSVYSHLP 12
          Q L +S Y+H P
Sbjct: 80 QQLQESAYAHEP 91


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 2    TLLDSVYSHLP 12
            T LD+V+ H P
Sbjct: 1314 TALDTVFRHNP 1324


Query: 4   LDSVYSHLPD 13
           + S Y+H PD
Sbjct: 192 IASEYTHRPD 201


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 2    TLLDSVYSHLP 12
            T LD+V+ H P
Sbjct: 1314 TALDTVFRHNP 1324


Query: 4   LDSVYSHLPD 13
           + S Y+H PD
Sbjct: 192 IASEYTHRPD 201


>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 820 SVPSHLPD 827


>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 820 SVPSHLPD 827


>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 820 SVPSHLPD 827


>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 820 SVPSHLPD 827


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 820 SVPSHLPD 827


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 823 SVPSHLPD 830


>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 820 SVPSHLPD 827


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 810 SVPSHLPD 817


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 810 SVPSHLPD 817


>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 810 SVPSHLPD 817


>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 810 SVPSHLPD 817


>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 823 SVPSHLPD 830


>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a

Query: 1  QTLLDSVYS 9
          QTL+ S YS
Sbjct: 80 QTLMQSAYS 88


>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57

Query: 1  QTLLDSVYS 9
          QTL+ S YS
Sbjct: 80 QTLMQSAYS 88


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 6   SVYSHLPD 13
           SV SHLPD
Sbjct: 810 SVPSHLPD 817


>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27

Query: 1  QTLLDSVYS 9
          QTL+ S YS
Sbjct: 80 QTLMQSAYS 88


>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United

Query: 1   QTLLDSVYSHLPDL 14
           +T+LD   + +PDL
Sbjct: 664 ETVLDFAKTDIPDL 677


>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   QTLLDSVYSHLPDLL 15
           ++L    Y HL DLL
Sbjct: 748 RSLCSFSYRHLRDLL 762


>sp|VP2_POVWU|MINOR capsid protein VP2|WU polyomavirus (WUPyV)

Query: 3   LLDSVYSHLPDL 14
           + + + SHLP+L
Sbjct: 165 VFNFIASHLPEL 176


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 4    LDSVYSHLPD 13
            L  VY+ LPD
Sbjct: 2050 LRGVYAALPD 2059


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 4    LDSVYSHLPD 13
            L  VY+ LPD
Sbjct: 2050 LRGVYAALPD 2059


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 4    LDSVYSHLPD 13
            L  VY+ LPD
Sbjct: 2050 LRGVYAALPD 2059


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 4    LDSVYSHLPD 13
            L  VY+ LPD
Sbjct: 2050 LRGVYAALPD 2059


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 4    LDSVYSHLPD 13
            L  VY+ LPD
Sbjct: 2050 LRGVYAALPD 2059


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 4    LDSVYSHLPD 13
            L  VY+ LPD
Sbjct: 2050 LRGVYAALPD 2059


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 4    LDSVYSHLPD 13
            L  VY+ LPD
Sbjct: 2050 LRGVYAALPD 2059


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 4    LDSVYSHLPD 13
            L  VY+ LPD
Sbjct: 2050 LRGVYAALPD 2059


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 4    LDSVYSHLPD 13
            L  VY+ LPD
Sbjct: 2050 LRGVYAALPD 2059


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 4   LDSVYSHLP 12
           LDS   HLP
Sbjct: 480 LDSSKDHLP 488


>sp|ALT2B_ENMGO|PROTEIN 2B*|Mengo encephalomyocarditis virus

Query: 4   LDSVYSHLPD 13
           LDS   H PD
Sbjct: 112 LDSSRDHKPD 121


>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12

Query: 5   DSVYSHLPDLL 15
           + VY  LPD++
Sbjct: 361 EQVYWSLPDMM 371


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 1   QTLLDSVYSH 10
           Q  LDSV+ H
Sbjct: 418 QPGLDSVFKH 427


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 1   QTLLDSVYSH 10
           Q  LDSV+ H
Sbjct: 419 QPGLDSVFKH 428


>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 9   SHLPD 13
           SHLPD
Sbjct: 469 SHLPD 473


>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 9   SHLPD 13
           SHLPD
Sbjct: 469 SHLPD 473


>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 9   SHLPD 13
           SHLPD
Sbjct: 469 SHLPD 473


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 4    LDSVYSHLPD 13
            LDSV  +LP+
Sbjct: 2026 LDSVIQYLPE 2035


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 4    LDSVYSHLPD 13
            LDSV  +LP+
Sbjct: 2026 LDSVIQYLPE 2035


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 4    LDSVYSHLPD 13
            LDSV  +LP+
Sbjct: 2026 LDSVIQYLPE 2035


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 4    LDSVYSHLPD 13
            LDSV  +LP+
Sbjct: 2026 LDSVIQYLPE 2035


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 4    LDSVYSHLPD 13
            LDSV  +LP+
Sbjct: 2026 LDSVIQYLPE 2035


>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5

Query: 5   DSVYSHLPDLL 15
           + VY  LPD++
Sbjct: 435 EQVYWSLPDMM 445


>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2

Query: 5   DSVYSHLPDLL 15
           + VY  LPD++
Sbjct: 435 EQVYWSLPDMM 445


>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42

Query: 5   DSVYSHL 11
           DS+Y+H+
Sbjct: 252 DSLYTHI 258


>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 5   DSVYSHLPDLL 15
           + +Y H+ D+L
Sbjct: 366 EKIYEHIEDVL 376


>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   QTLLDSVYSHLPD 13
           QT++ S   HL D
Sbjct: 207 QTMVSSKTGHLTD 219


>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)

Query: 1   QTLLDSVYSHLPD 13
           QT++ S   HL D
Sbjct: 207 QTMVSSKTGHLTD 219


>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)

Query: 1   QTLLDSVYSHLPD 13
           QT++ S   HL D
Sbjct: 207 QTMVSSKTGHLTD 219


>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   TLLDSVYSHLPD 13
           TL+  ++ H PD
Sbjct: 557 TLIRVLFYHTPD 568


>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   TLLDSVYSHLPD 13
           TL+  ++ H PD
Sbjct: 557 TLIRVLFYHTPD 568


>sp|BZLF1_EBVB9|LYTIC switch protein BZLF1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4   LDSVYSHLPDLL 15
           +DS+    PD+L
Sbjct: 227 VDSIIPRTPDVL 238


>sp|TRX1_EBVB9|TRIPLEX capsid protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4   LDSVYSHLPD 13
           +DS YS++ D
Sbjct: 350 IDSFYSNVSD 359


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 3    LLDSVYSHLPDLL 15
            ++DS YS+L  +L
Sbjct: 4611 IVDSYYSYLMPVL 4623


>sp|BZLF1_EBVA8|LYTIC switch protein BZLF1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4   LDSVYSHLPDLL 15
           +DS+    PD+L
Sbjct: 227 VDSIIPRTPDVL 238


>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 10  HLPDL 14
           HLPDL
Sbjct: 226 HLPDL 230


>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 10  HLPDL 14
           HLPDL
Sbjct: 226 HLPDL 230


>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 10  HLPDL 14
           HLPDL
Sbjct: 226 HLPDL 230


>sp|BZLF1_EBVG|LYTIC switch protein BZLF1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4   LDSVYSHLPDLL 15
           +DS+    PD+L
Sbjct: 227 VDSIIPRTPDVL 238


>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)

Query: 5   DSVYSHLPDL 14
           D+VY H  DL
Sbjct: 439 DAVYLHRIDL 448


>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)

Query: 5   DSVYSHLPDL 14
           D+VY H  DL
Sbjct: 439 DAVYLHRIDL 448


>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)

Query: 5   DSVYSHLPDL 14
           D+VY H  DL
Sbjct: 439 DAVYLHRIDL 448


>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)

Query: 5   DSVYSHLPDL 14
           D+VY H  DL
Sbjct: 439 DAVYLHRIDL 448


>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)

Query: 5   DSVYSHLPDL 14
           D+VY H  DL
Sbjct: 439 DAVYLHRIDL 448


>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)

Query: 5   DSVYSHLPDL 14
           D+VY H  DL
Sbjct: 439 DAVYLHRIDL 448


>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)

Query: 5   DSVYSHLPDL 14
           D+VY H  DL
Sbjct: 439 DAVYLHRIDL 448




130|Sequence|646|655|SVYSHLPDLL

>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 820 SVPSHLPD 827


>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 820 SVPSHLPD 827


>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 820 SVPSHLPD 827


>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 810 SVPSHLPD 817


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 810 SVPSHLPD 817


>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 820 SVPSHLPD 827


>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 820 SVPSHLPD 827


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 820 SVPSHLPD 827


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 823 SVPSHLPD 830


>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 810 SVPSHLPD 817


>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 821 SVPSHLPD 828


>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 810 SVPSHLPD 817


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 810 SVPSHLPD 817


>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3

Query: 1   SVYSHLPD 8
           SV SHLPD
Sbjct: 823 SVPSHLPD 830


>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   YSHLPDLL 10
           Y HL DLL
Sbjct: 755 YRHLRDLL 762


>sp|VP2_POVWU|MINOR capsid protein VP2|WU polyomavirus (WUPyV)

Query: 2   VYSHLPDL 9
           + SHLP+L
Sbjct: 169 IASHLPEL 176


>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4   SHLPD 8
           SHLPD
Sbjct: 469 SHLPD 473


>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4   SHLPD 8
           SHLPD
Sbjct: 469 SHLPD 473


>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4   SHLPD 8
           SHLPD
Sbjct: 469 SHLPD 473


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 2    VYSHLPD 8
            VY+ LPD
Sbjct: 2053 VYAALPD 2059


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 2    VYSHLPD 8
            VY+ LPD
Sbjct: 2053 VYAALPD 2059


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 2    VYSHLPD 8
            VY+ LPD
Sbjct: 2053 VYAALPD 2059


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 2    VYSHLPD 8
            VY+ LPD
Sbjct: 2053 VYAALPD 2059


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 2    VYSHLPD 8
            VY+ LPD
Sbjct: 2053 VYAALPD 2059


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 2    VYSHLPD 8
            VY+ LPD
Sbjct: 2053 VYAALPD 2059


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 2    VYSHLPD 8
            VY+ LPD
Sbjct: 2053 VYAALPD 2059


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 2    VYSHLPD 8
            VY+ LPD
Sbjct: 2053 VYAALPD 2059


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 2    VYSHLPD 8
            VY+ LPD
Sbjct: 2053 VYAALPD 2059


>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 5   HLPDL 9
           HLPDL
Sbjct: 226 HLPDL 230


>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 5   HLPDL 9
           HLPDL
Sbjct: 226 HLPDL 230


>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 5   HLPDL 9
           HLPDL
Sbjct: 226 HLPDL 230


>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12

Query: 2   VYSHLPDLL 10
           VY  LPD++
Sbjct: 363 VYWSLPDMM 371


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 1   SVYSHLPD 8
           S Y+H PD
Sbjct: 194 SEYTHRPD 201


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 1   SVYSHLPD 8
           S Y+H PD
Sbjct: 194 SEYTHRPD 201


>sp|YVAB_VACCC|UNCHARACTERIZED 10.7 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 5  HLPDLL 10
          HLP+LL
Sbjct: 20 HLPNLL 25


>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 2   VYSHLPDLL 10
           +Y H+ D+L
Sbjct: 368 IYEHIEDVL 376


>sp|NCAP_INBSI|NUCLEOPROTEIN B virus (strain B/Singapore/222/1979)

Query: 1   SVYSHLPDL 9
           S+Y+ +P L
Sbjct: 337 SIYAKIPQL 345


>sp|NCAP_INBP9|NUCLEOPROTEIN B virus (strain B/Panama/45/1990)

Query: 1   SVYSHLPDL 9
           S+Y+ +P L
Sbjct: 337 SIYAKIPQL 345


>sp|NCAP_INBLE|NUCLEOPROTEIN B virus (strain B/Lee/1940)

Query: 1   SVYSHLPDL 9
           S+Y+ +P L
Sbjct: 337 SIYAKIPQL 345


>sp|NCAP_INBAA|NUCLEOPROTEIN B virus (strain B/Ann

Query: 1   SVYSHLPDL 9
           S+Y+ +P L
Sbjct: 337 SIYAKIPQL 345


>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58

Query: 1   SVYSHL 6
           S+Y+HL
Sbjct: 252 SIYTHL 257


>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 1   SVYSHLPDLL 10
           S ++HL D+L
Sbjct: 262 SAWTHLYDVL 271


>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52

Query: 1   SVYSHL 6
           S+Y+HL
Sbjct: 255 SIYAHL 260


>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 1   SVYSHLPDLL 10
           S ++HL D+L
Sbjct: 262 SAWTHLYDVL 271


>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   YSHLPDLL 10
           Y HL DL+
Sbjct: 763 YRHLRDLV 770


>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5

Query: 2   VYSHLPDLL 10
           VY  LPD++
Sbjct: 437 VYWSLPDMM 445


>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2

Query: 2   VYSHLPDLL 10
           VY  LPD++
Sbjct: 437 VYWSLPDMM 445


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 4  SHLPDL 9
          +H+PDL
Sbjct: 72 THIPDL 77


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 4  SHLPDL 9
          +H+PDL
Sbjct: 72 THIPDL 77


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 2    VYSHLPDL 9
            +Y H PDL
Sbjct: 1133 LYLHNPDL 1140


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 1   SVYSHLPDLL 10
           S+YS  P L+
Sbjct: 635 SLYSGFPSLI 644


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 1   SVYSHLPDLL 10
           S+YS  P L+
Sbjct: 635 SLYSGFPSLI 644