TM2D3_HUMAN Blast Output
Archaea
1|Sequence|1|10|MAGGVLPLRG

>sp|KPTA_PYRAE|PROBABLE RNA 2'-phosphotransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 MAGGVLPLR 9
MA G+LP+R
Sbjct: 137 MAQGLLPMR 145


>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 1 MAGGVLPLRG 10
+ GG LP RG
Sbjct: 239 LGGGCLPFRG 248


>sp|BACS2_HALSA|SENSORY rhodopsin-2|Halobacterium salinarum (strain ATCC 700922

Query: 1 MAGGVLPLR 9
+AG VLP+R
Sbjct: 15 LAGTVLPIR 23


>sp|MTAD_THEON|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus onnurineus (strain NA1)

Query: 1 MAGGVLPLR 9
+A GV+PL+
Sbjct: 274 LASGVMPLQ 282


>sp|IDI2_METTP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 MAGGVLPL 8
MAG LPL
Sbjct: 284 MAGAALPL 291




2|Sequence|6|15|LPLRGLRALC

>sp|THIC2_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 LPLRGLRALC 10
L +RG++ LC
Sbjct: 272 LSVRGMKELC 281


>sp|THIC1_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LPLRGLRALC 10
L +RG++ LC
Sbjct: 272 LSVRGMKELC 281


>sp|THIC1_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LPLRGLRALC 10
L +RG++ LC
Sbjct: 272 LSVRGMKELC 281


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PLRGLRA 8
P+RGLR+
Sbjct: 609 PIRGLRS 615


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 PLRGLRAL 9
PL+GLR +
Sbjct: 180 PLKGLRVM 187


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 1 LPLRGLRAL 9
L +RG+RAL
Sbjct: 503 LEVRGIRAL 511




3|Sequence|11|20|LRALCRVLLF

>sp|Y1062_METJA|UNCHARACTERIZED protein MJ1062|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LRALCRVLLF 10
+R LC+ L+F
Sbjct: 93 IRELCKKLIF 102


>sp|THII_THEAC|TRNA sulfurtransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LRALCRVL 8
LRA CR++
Sbjct: 39 LRASCRIM 46




4|Sequence|16|25|RVLLFLSQFC

>sp|Y1466_METJA|UNCHARACTERIZED protein MJ1466|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RVLLFLSQF 9
+V LFLSQF
Sbjct: 43 KVSLFLSQF 51


>sp|Y017_METJA|UNCHARACTERIZED protein MJ0017|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RVLLFLSQF 9
+V LFLSQF
Sbjct: 43 KVSLFLSQF 51


>sp|Y13A_METJA|UNCHARACTERIZED protein MJ0139.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RVLLFLSQF 9
+V LFLSQF
Sbjct: 43 KVSLFLSQF 51




5|Sequence|21|30|LSQFCILSGG

>sp|QUEC_METMP|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LSQFCILSGG 10
+ C+LSGG
Sbjct: 1 MKAICVLSGG 10


>sp|QUEC_METM6|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 LSQFCILSGG 10
+ C+LSGG
Sbjct: 1 MKAICVLSGG 10


>sp|QUEC_METM5|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 LSQFCILSGG 10
+ C+LSGG
Sbjct: 1 MKAICVLSGG 10


>sp|QUEC_METM7|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 LSQFCILSGG 10
+ C+LSGG
Sbjct: 1 MRAICVLSGG 10


>sp|QUEC_META3|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LSQFCILSGG 10
+ C+LSGG
Sbjct: 1 MKAVCVLSGG 10


>sp|QUEC_PICTO|7-CYANO-7-DEAZAGUANINE synthase|Picrophilus torridus (strain ATCC 700027

Query: 5 CILSGG 10
C+LSGG
Sbjct: 6 CLLSGG 11


>sp|QUEC_METMJ|7-CYANO-7-DEAZAGUANINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 CILSGG 10
C+LSGG
Sbjct: 6 CLLSGG 11


>sp|QUEC_METHJ|7-CYANO-7-DEAZAGUANINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LSQFCILSGG 10
+ C+LSGG
Sbjct: 1 MKAVCLLSGG 10


>sp|QUEC_METPE|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LSQFCILSGG 10
+ C+LSGG
Sbjct: 1 MKAVCLLSGG 10


>sp|DCDB_METM7|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain C7 /

Query: 5 CILSGG 10
CI+SGG
Sbjct: 90 CIVSGG 95


>sp|QUEC_METLZ|7-CYANO-7-DEAZAGUANINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 CILSGG 10
C+LSGG
Sbjct: 6 CLLSGG 11


>sp|ARSS_METTH|ARCHAETIDYLSERINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LSQFCILSGG 10
LS+F +L+GG
Sbjct: 116 LSRFNVLTGG 125




6|Sequence|26|35|ILSGGEQSQA

>sp|WTPC_METJA|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Methanocaldococcus jannaschii

Query: 2 LSGGEQSQ 9
LSGGEQ +
Sbjct: 130 LSGGEQQR 137


>sp|Y1662_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 ILSGGEQSQ 9
ILSGGE+ +
Sbjct: 139 ILSGGEKQR 147


>sp|TRMY_METLZ|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocorpusculum

Query: 1 ILSGGEQS 8
IL GGEQ+
Sbjct: 55 ILKGGEQA 62


>sp|RAD50_METJA|DNA double-strand break repair Rad50|Methanocaldococcus jannaschii

Query: 2 LSGGEQ 7
LSGGEQ
Sbjct: 915 LSGGEQ 920


>sp|WTPC_PYRHO|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus horikoshii (strain ATCC

Query: 2 LSGGEQSQ 9
LSGGEQ +
Sbjct: 131 LSGGEQQR 138


>sp|WTPC_PYRFU|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus furiosus (strain ATCC

Query: 2 LSGGEQSQ 9
LSGGEQ +
Sbjct: 131 LSGGEQQR 138


>sp|Y2317_HALSA|PUTATIVE ABC transporter ATP-binding protein|Halobacterium salinarum (strain

Query: 2 LSGGEQSQ 9
LSGGEQ +
Sbjct: 134 LSGGEQER 141


>sp|SMC_METVO|CHROMOSOME partition protein Smc|Methanococcus voltae

Query: 1 ILSGGEQS 8
++SGGE+S
Sbjct: 1110 VMSGGEKS 1117


>sp|RAD50_METMP|DNA double-strand break repair Rad50|Methanococcus maripaludis (strain

Query: 2 LSGGEQ 7
LSGGEQ
Sbjct: 905 LSGGEQ 910


>sp|SMC_THEAC|CHROMOSOME partition protein Smc|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LSGGEQSQA 10
LSGGE+S A
Sbjct: 1044 LSGGEKSVA 1052




7|Sequence|31|40|EQSQALAQSI

***** No hits found ******


8|Sequence|36|45|LAQSIKDPGP

>sp|AOCD_METJA|ORNITHINE cyclodeaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LAQSIKDPGP 10
LA SI+D GP
Sbjct: 313 LAGSIRDDGP 322


>sp|AOCD_METKA|ORNITHINE cyclodeaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 LAQSIKDPGP 10
LA SI+D GP
Sbjct: 309 LAGSIRDDGP 318


>sp|AOCD_METMP|ORNITHINE cyclodeaminase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LAQSIKDPGP 10
LA SI+D GP
Sbjct: 313 LAGSIRDDGP 322


>sp|AOCD_ARCFU|ORNITHINE cyclodeaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LAQSIKDPGP 10
LA SI+D GP
Sbjct: 305 LAGSIRDDGP 314


>sp|CPGS_PYRHO|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus horikoshii (strain

Query: 1 LAQSIKDPG 9
+A +KDPG
Sbjct: 287 MADEVKDPG 295


>sp|AOCD_METTH|ORNITHINE cyclodeaminase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LAQSIKDPGP 10
LA SI+D GP
Sbjct: 308 LAGSIRDDGP 317


>sp|ARGB_METMA|ACETYLGLUTAMATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LAQSIKDPG 9
L ++IKDPG
Sbjct: 216 LLRNIKDPG 224


>sp|RPO1C_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Sulfurisphaera tokodaii (strain DSM

Query: 2 AQSIKDPG 9
AQSI +PG
Sbjct: 72 AQSIGEPG 79


>sp|RPO1C_METS5|DNA-DIRECTED RNA polymerase subunit Rpo1C|Metallosphaera sedula (strain ATCC

Query: 2 AQSIKDPG 9
AQSI +PG
Sbjct: 72 AQSIGEPG 79


>sp|RPO1C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanocaldococcus jannaschii

Query: 2 AQSIKDPG 9
AQSI +PG
Sbjct: 65 AQSIGEPG 72


>sp|RPO1C_HALMO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halococcus morrhuae (Micrococcus

Query: 2 AQSIKDPG 9
AQSI +PG
Sbjct: 66 AQSIGEPG 73


>sp|RPO1C_HALMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Haloarcula marismortui (strain ATCC

Query: 2 AQSIKDPG 9
AQSI +PG
Sbjct: 68 AQSIGEPG 75


>sp|RPO1C_METM6|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C6

Query: 2 AQSIKDPG 9
AQSI +PG
Sbjct: 65 AQSIGEPG 72


>sp|RPO1C_METM7|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C7

Query: 2 AQSIKDPG 9
AQSI +PG
Sbjct: 65 AQSIGEPG 72


>sp|RPO1C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halobacterium salinarum (strain ATCC

Query: 2 AQSIKDPG 9
AQSI +PG
Sbjct: 68 AQSIGEPG 75


>sp|RPO1C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halobacterium salinarum (strain ATCC

Query: 2 AQSIKDPG 9
AQSI +PG
Sbjct: 68 AQSIGEPG 75


>sp|RPO1C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus vannielii (strain ATCC

Query: 2 AQSIKDPG 9
AQSI +PG
Sbjct: 65 AQSIGEPG 72


>sp|RPO1C_METMP|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain

Query: 2 AQSIKDPG 9
AQSI +PG
Sbjct: 65 AQSIGEPG 72


>sp|MTXX_METAC|PUTATIVE methyltransferase mtx subunit X|Methanosarcina acetivorans

Query: 1 LAQSIKDPGP 10
+A I+DP P
Sbjct: 19 VAMGIRDPNP 28


>sp|RPO1C_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Aeropyrum pernix (strain ATCC 700893

Query: 2 AQSIKDPG 9
AQSI +PG
Sbjct: 68 AQSIGEPG 75


>sp|RPO1C_METM5|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C5

Query: 2 AQSIKDPG 9
AQSI +PG
Sbjct: 65 AQSIGEPG 72


>sp|RPO1C_METAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina acetivorans (strain

Query: 2 AQSIKDPG 9
AQSI +PG
Sbjct: 64 AQSIGEPG 71


>sp|RPO1C_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma acidophilum (strain ATCC

Query: 2 AQSIKDPG 9
AQSI +PG
Sbjct: 188 AQSIGEPG 195


>sp|RPO1C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Archaeoglobus fulgidus (strain ATCC

Query: 2 AQSIKDPG 9
AQSI +PG
Sbjct: 64 AQSIGEPG 71


>sp|RPO1C_METMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina mazei (strain ATCC

Query: 2 AQSIKDPG 9
AQSI +PG
Sbjct: 67 AQSIGEPG 74


>sp|RPO1C_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma volcanium (strain ATCC

Query: 2 AQSIKDPG 9
AQSI +PG
Sbjct: 188 AQSIGEPG 195


>sp|RPO1C_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrobaculum aerophilum (strain ATCC

Query: 2 AQSIKDPG 9
AQSI +PG
Sbjct: 62 AQSIGEPG 69




9|Sequence|41|50|KDPGPTRTFT

>sp|HIS4_METAC|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosarcina acetivorans

Query: 2 DPGPTR 7
+PGPTR
Sbjct: 184 NPGPTR 189


>sp|MALA_HALJT|ALPHA-AMYLASE MalA|Haloarcula japonica (strain ATCC 49778

Query: 1 KDPGPTRTFT 10
+DP PT T+T
Sbjct: 21 RDPDPTATYT 30


>sp|KHSE_PYRAE|HOMOSERINE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DPGPTRTFT 10
DPGP T T
Sbjct: 46 DPGPENTVT 54


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC

Query: 2 DPGPTRTFT 10
D GPTR T
Sbjct: 76 DAGPTRIVT 84


>sp|RPO1C_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma volcanium (strain ATCC

Query: 5 PTRTFT 10
PTRT+T
Sbjct: 379 PTRTYT 384


>sp|RPO1C_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma acidophilum (strain ATCC

Query: 5 PTRTFT 10
PTRT+T
Sbjct: 379 PTRTYT 384


>sp|Y2193_ARCFU|UNCHARACTERIZED protein AF_2193|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KDPGPTRTFT 10
K PGP + +T
Sbjct: 31 KKPGPNQKYT 40


>sp|TRPA_NATPD|TRYPTOPHAN synthase alpha chain|Natronomonas pharaonis (strain ATCC 35678

Query: 1 KDPGPTRT 8
+ PGP RT
Sbjct: 270 RQPGPERT 277


>sp|G6PI_NATPD|PROBABLE glucose-6-phosphate isomerase|Natronomonas pharaonis (strain ATCC

Query: 2 DPGPTR 7
DP PTR
Sbjct: 104 DPAPTR 109


>sp|TMCA_AERPE|TRNA(MET) cytidine acetyltransferase TmcA|Aeropyrum pernix (strain ATCC

Query: 2 DPGPTR 7
DPGP R
Sbjct: 116 DPGPPR 121


>sp|FEN_METHJ|FLAP endonuclease 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DPGPTRTF 9
DP P R+F
Sbjct: 269 DPEPVRSF 276


>sp|URE1_HALMA|UREASE subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 2 DPGPTR 7
DPGP R
Sbjct: 201 DPGPLR 206




10|Sequence|46|55|TRTFTVVPRA

>sp|RF1_PICTO|PEPTIDE chain release factor subunit|Picrophilus torridus (strain ATCC

Query: 1 TRTFTVVPR 9
T+TFT PR
Sbjct: 335 TKTFTEKPR 343


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii (strain

Query: 1 TRTFTVVP 8
TRT VVP
Sbjct: 191 TRTINVVP 198




11|Sequence|51|60|VVPRAAESTE

>sp|DLD_ARCFU|D-LACTATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VVPRAAES 8
V PRAAE+
Sbjct: 29 VAPRAAEN 36




12|Sequence|56|65|AESTEIPPYV

>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 2 ESTEIPPY 9
E EIPPY
Sbjct: 300 EKLEIPPY 307


>sp|PFDB_CALMQ|PREFOLDIN subunit beta|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 STEIPPYV 10
+TEIPP V
Sbjct: 2 ATEIPPAV 9


>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 ESTEIPPYV 10
E E+PPYV
Sbjct: 331 EDVELPPYV 339


>sp|CMR3_PYRFU|CRISPR system Cmr subunit Cmr3|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ESTEIPPYV 10
E E+PPY+
Sbjct: 295 EEVEVPPYI 303


>sp|THIL_NITMS|THIAMINE-MONOPHOSPHATE kinase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 ESTEIPP 8
+ST+IPP
Sbjct: 43 QSTDIPP 49


>sp|SRP54_HALVD|SIGNAL recognition particle 54 kDa|Haloferax volcanii (strain ATCC 29605

Query: 1 AESTEIP 7
ESTEIP
Sbjct: 88 GESTEIP 94


>sp|NPD_HALMA|NAD-DEPENDENT protein deacetylase|Haloarcula marismortui (strain ATCC 43049

Query: 1 AESTEIPP 8
AES+++PP
Sbjct: 157 AESSDLPP 164


>sp|CCA_PYRIL|CCA-ADDING enzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 2 ESTEIPPYV 10
E E+PPY+
Sbjct: 333 EQIELPPYM 341


>sp|HIS1_METTH|ATP phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 3 STEIPPYV 10
STEI P++
Sbjct: 143 STEIAPFI 150


>sp|FPRA_METTH|COENZYME F420H(2) oxidase|Methanothermobacter thermautotrophicus (strain

Query: 4 TEIPPYV 10
TEIP Y+
Sbjct: 184 TEIPEYI 190


>sp|Y1428_METJA|TPR repeat-containing protein MJ1428|Methanocaldococcus jannaschii

Query: 1 AESTEIPPY 9
AE+T IP Y
Sbjct: 353 AETTGIPKY 361


>sp|TPIS_THEKO|TRIOSEPHOSPHATE isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AESTEIPPY 9
AES EIP +
Sbjct: 55 AESVEIPVF 63


>sp|TPIS_PYRWO|TRIOSEPHOSPHATE isomerase|Pyrococcus woesei

Query: 1 AESTEIPPY 9
AES EIP +
Sbjct: 55 AESVEIPVF 63


>sp|TPIS_PYRFU|TRIOSEPHOSPHATE isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AESTEIPPY 9
AES EIP +
Sbjct: 55 AESVEIPVF 63


>sp|Y1455_METJA|UNCHARACTERIZED protein MJ1455|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 TEIPPYV 10
TEIPP V
Sbjct: 26 TEIPPAV 32


>sp|PYCA_METJA|PYRUVATE carboxylase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 3 STEIPPY 9
EIPPY
Sbjct: 374 GAEIPPY 380




13|Sequence|61|70|IPPYVMKCPS

>sp|SYS_KORCO|SERINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 IPPYVMK 7
IPPY+M+
Sbjct: 216 IPPYMMR 222


>sp|ARADH_SACS2|D-ARABINOSE 1-dehydrogenase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 1 IPPYVMKCP 9
I PY++K P
Sbjct: 317 IKPYIIKVP 325


>sp|SYS_METMJ|SERINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 IPPYVM 6
IPPY+M
Sbjct: 196 IPPYMM 201


>sp|SYS_METLZ|SERINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 IPPYVM 6
IPPY+M
Sbjct: 196 IPPYMM 201


>sp|TRM1_METMJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoculleus marisnigri

Query: 4 YVMKCPS 10
YVM+CP+
Sbjct: 233 YVMQCPN 239


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 PPYVMKCP 9
PP KCP
Sbjct: 1615 PPLTGKCP 1622


>sp|CYAS_METBU|CYSTEATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 4 YVMKCP 9
Y++KCP
Sbjct: 4 YIVKCP 9


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 PPYVMKCP 9
PPY++ P
Sbjct: 34 PPYIIDTP 41


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PPYVMKCP 9
PPY++ P
Sbjct: 34 PPYIIDTP 41


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 IPPYVMKCP 9
+PP KCP
Sbjct: 1163 VPPLSGKCP 1171




14|Sequence|66|75|MKCPSNGLCS

>sp|CCA_AERPE|CCA-ADDING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 MKCPSNGLC 9
+ CPS G C
Sbjct: 431 VTCPSTGPC 439


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 KCPSNGLC 9
K P NG+C
Sbjct: 625 KAPYNGVC 632


>sp|TRUB_PYRAE|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum aerophilum (strain ATCC

Query: 1 MKCPSNGLCS 10
MKCPS + S
Sbjct: 1 MKCPSREVFS 10


>sp|Y2319_HALLT|UPF0179 protein Hlac_2319|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 KCPSNGLC 9
+CPS+G C
Sbjct: 101 ECPSHGYC 108


>sp|Y065_METJA|UNCHARACTERIZED protein MJ0065|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KCPSNGL 8
KC SNGL
Sbjct: 144 KCISNGL 150


>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 1 MKCPSNGLCS 10
+ CP G CS
Sbjct: 426 LACPGGGNCS 435


>sp|NADA_SACS2|QUINOLINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 MKCPSNGLC 9
+K P NG C
Sbjct: 167 IKVPPNGRC 175


>sp|MFNA_METMA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina mazei (strain

Query: 4 PSNGLC 9
PS GLC
Sbjct: 84 PSGGLC 89


>sp|ILVD_METS3|DIHYDROXY-ACID dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 CPSNGLCS 10
CP G CS
Sbjct: 185 CPGAGSCS 192


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 2 KCPSNGLC 9
+C SNG C
Sbjct: 13 QCDSNGNC 20


>sp|NADA_SULTO|QUINOLINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 MKCPSNGLC 9
+K P NG C
Sbjct: 162 VKVPPNGRC 170


>sp|QUEE_METHJ|7-CARBOXY-7-DEAZAGUANINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 MKCPSNG 7
+KCPS+G
Sbjct: 148 VKCPSSG 154


>sp|Y215_METJA|UNCHARACTERIZED protein MJ0215|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MKCPSNGLC 9
+KC S G C
Sbjct: 6 LKCESMGRC 14




15|Sequence|71|80|NGLCSRLPAD

>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NGLCSRLP 8
NGL +RLP
Sbjct: 420 NGLTARLP 427


>sp|UVRC_HALMA|UVRABC system protein C|Haloarcula marismortui (strain ATCC 43049

Query: 3 LCSRLPAD 10
LC+ PAD
Sbjct: 316 LCAEAPAD 323




16|Sequence|76|85|RLPADCIDCT

>sp|RPO3_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus shibatae (strain ATCC

Query: 1 RLPADCIDCT 10
R P +CIDCT
Sbjct: 77 RWPEECIDCT 86


>sp|RPO3_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus solfataricus (strain

Query: 1 RLPADCIDCT 10
R P +CI+CT
Sbjct: 77 RWPEECIECT 86


>sp|RPO3_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 RLPADCIDCT 10
R P +CI+CT
Sbjct: 77 RWPEECIECT 86


>sp|RPO3_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 RLPADCIDCT 10
R P +CI+CT
Sbjct: 77 RWPEECIECT 86


>sp|RPO3_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 RLPADCIDCT 10
R P +CI+CT
Sbjct: 77 RWPEECIECT 86


>sp|RPO3_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 RLPADCIDCT 10
R P +CI+CT
Sbjct: 77 RWPEECIECT 86


>sp|RPO3_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 RLPADCIDCT 10
R P +CI+CT
Sbjct: 77 RWPEECIECT 86


>sp|RPO3_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 RLPADCIDCT 10
R P +CI+CT
Sbjct: 77 RWPEECIECT 86


>sp|THIC_METPE|PHOSPHOMETHYLPYRIMIDINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 RLPADCIDCT 10
R+PAD CT
Sbjct: 398 RMPADTDGCT 407


>sp|THIC_METMJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RLPADCIDCT 10
R+PAD CT
Sbjct: 398 RMPADTDGCT 407


>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 RLPADCIDCT 10
R+PAD CT
Sbjct: 399 RMPADTDGCT 408


>sp|THIC_METLZ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 RLPADCIDCT 10
R+PAD CT
Sbjct: 399 RMPADSDACT 408


>sp|AROA_METKA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 RLPADCIDC 9
R P D +DC
Sbjct: 84 RAPEDVVDC 92


>sp|KPTA_THEKO|PROBABLE RNA 2'-phosphotransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 RLPADCI 7
R+P DCI
Sbjct: 170 RVPPDCI 176


>sp|AROA_KORCO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 LPADCIDC 9
+P D IDC
Sbjct: 78 IPDDVIDC 85


>sp|NPD2_ARCFU|NAD-DEPENDENT protein deacylase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 DCIDC 9
DC+DC
Sbjct: 125 DCLDC 129


>sp|ILVD_METST|DIHYDROXY-ACID dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LPADCIDCT 10
L DCI CT
Sbjct: 332 LNTDCITCT 340


>sp|RNH2_PYRAE|RIBONUCLEASE HII|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RLPADCI 7
R+P++CI
Sbjct: 177 RMPSECI 183


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 LPADCI 7
LPADC+
Sbjct: 346 LPADCL 351


>sp|AROA_HALWD|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RLPADCIDC 9
R P D I+C
Sbjct: 79 RTPTDIINC 87


>sp|TRM56_PICTO|TRNA (cytidine(56)-2'-O)-methyltransferase|Picrophilus torridus (strain

Query: 4 ADCIDC 9
ADCI C
Sbjct: 202 ADCIPC 207


>sp|AROA_HALLT|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 2 LPADCIDC 9
+P D IDC
Sbjct: 86 VPDDVIDC 93


>sp|NREB_ARCFU|DNA repair protein NreB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 DCIDC 9
DCI+C
Sbjct: 2 DCIEC 6




17|Sequence|81|90|CIDCTTNFSC

>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 1 CIDCTTNFSC 10
C++C F+C
Sbjct: 576 CMECVNTFAC 585


>sp|RPO3_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus shibatae (strain ATCC

Query: 1 CIDCTTN 7
CIDCT N
Sbjct: 82 CIDCTEN 88


>sp|TFE_METLZ|TRANSCRIPTION factor E|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 TTNFSC 10
TTNFSC
Sbjct: 173 TTNFSC 178


>sp|KAD_HALMA|ADENYLATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 CIDCTTNF 8
C DC TN+
Sbjct: 129 CDDCGTNY 136


>sp|GLMS_METMA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina mazei (strain ATCC

Query: 3 DCTTNFSC 10
+C NF+C
Sbjct: 466 ECAENFAC 473


>sp|ILVD_METST|DIHYDROXY-ACID dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 CIDCTTN 7
CI CT+N
Sbjct: 336 CITCTSN 342


>sp|RPO3_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 CIDCTTN 7
CI+CT N
Sbjct: 82 CIECTEN 88


>sp|RPO3_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 CIDCTTN 7
CI+CT N
Sbjct: 82 CIECTEN 88


>sp|RPO3_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 CIDCTTN 7
CI+CT N
Sbjct: 82 CIECTEN 88


>sp|RPO3_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 CIDCTTN 7
CI+CT N
Sbjct: 82 CIECTEN 88


>sp|RPO3_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 CIDCTTN 7
CI+CT N
Sbjct: 82 CIECTEN 88


>sp|RPO3_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 CIDCTTN 7
CI+CT N
Sbjct: 82 CIECTEN 88


>sp|RPO3_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus solfataricus (strain

Query: 1 CIDCTTN 7
CI+CT N
Sbjct: 82 CIECTEN 88


>sp|RS3A_METHJ|SMALL ribosomal subunit protein eS1|Methanospirillum hungatei JF-1

Query: 2 IDCTTNF 8
IDC NF
Sbjct: 104 IDCVVNF 110


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 CIDCTTNF 8
C+ C T F
Sbjct: 1286 CVKCNTKF 1293


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 CIDCTTNF 8
C+ C T F
Sbjct: 1308 CVKCNTKF 1315


>sp|COBQ_METB6|PROBABLE cobyric acid synthase|Methanoregula boonei (strain DSM 21154

Query: 2 IDCTTNFS 9
+DC+T F+
Sbjct: 353 LDCSTRFA 360


>sp|ASSY_METKA|ARGININOSUCCINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 IDCTTNFSC 10
+DC F C
Sbjct: 61 VDCVDEFVC 69


>sp|LYSJ_PYRAE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 IDCTTN 7
IDC TN
Sbjct: 32 IDCNTN 37


>sp|Y1599_METJA|UNCHARACTERIZED protein MJ1599|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CIDCTT 6
C+DC T
Sbjct: 24 CVDCLT 29


>sp|TIAS_SACI2|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Saccharolobus islandicus

Query: 4 CTTNFS 9
CTT+FS
Sbjct: 17 CTTHFS 22


>sp|G3P_METKA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 CIDCTTNFSC 10
C+ C T C
Sbjct: 145 CVSCNTTALC 154


>sp|HDRC_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 4 CTTNFSC 10
CTT +SC
Sbjct: 79 CTTCYSC 85


>sp|HDRC_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 4 CTTNFSC 10
CTT +SC
Sbjct: 79 CTTCYSC 85




18|Sequence|86|95|TNFSCTYGKP

>sp|PUR2_METKA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 FSCTYGKP 10
F+C YG P
Sbjct: 296 FNCRYGDP 303


>sp|ACDG_METTH|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanothermobacter

Query: 1 TNFSCTY 7
TNFS TY
Sbjct: 353 TNFSLTY 359


>sp|Y1418_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 NFSCTYG 8
NFS TYG
Sbjct: 6 NFSYTYG 12


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 5 CTYGK 9
CTYGK
Sbjct: 79 CTYGK 83


>sp|MAP2_METJA|METHIONINE aminopeptidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 SCTYGKP 10
SC YG P
Sbjct: 259 SCIYGYP 265


>sp|FAU1_SACI7|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 SCTYG 8
SCTYG
Sbjct: 97 SCTYG 101


>sp|FAU1_SACI6|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.4 /

Query: 4 SCTYG 8
SCTYG
Sbjct: 97 SCTYG 101


>sp|FAU1_SACI4|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.14.25 /

Query: 4 SCTYG 8
SCTYG
Sbjct: 97 SCTYG 101


>sp|FAU1_SACI3|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.27)

Query: 4 SCTYG 8
SCTYG
Sbjct: 97 SCTYG 101


>sp|FAU1_SACI2|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 SCTYG 8
SCTYG
Sbjct: 97 SCTYG 101


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 1 TNFSCTYGKP 10
T ++C +G+P
Sbjct: 559 TPWTCPHGRP 568


>sp|MTRE_METFE|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanothermus fervidus

Query: 2 NFSCTYGKP 10
NF+ YG P
Sbjct: 228 NFTVKYGSP 236


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 FSCTYG 8
++CTYG
Sbjct: 266 YNCTYG 271


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 FSCTYG 8
++CTYG
Sbjct: 266 YNCTYG 271


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FSCTYG 8
++CTYG
Sbjct: 266 YNCTYG 271


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 FSCTYG 8
++CTYG
Sbjct: 266 YNCTYG 271


>sp|TFE_METLZ|TRANSCRIPTION factor E|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 TNFSC 5
TNFSC
Sbjct: 174 TNFSC 178


>sp|YLG3_ACIAM|UNCHARACTERIZED protein in lig 3'region|Acidianus ambivalens (Desulfurolobus

Query: 6 TYGKP 10
TYGKP
Sbjct: 66 TYGKP 70


>sp|PURP_METS3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanobrevibacter smithii (strain ATCC

Query: 6 TYGKP 10
TYGKP
Sbjct: 334 TYGKP 338


>sp|MCH_META3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 6 TYGKP 10
TYGKP
Sbjct: 305 TYGKP 309


>sp|HACA_METMA|PROBABLE methanogen homoaconitase large subunit|Methanosarcina mazei (strain

Query: 4 SCTYG 8
SCTYG
Sbjct: 101 SCTYG 105


>sp|HACA_METAC|PROBABLE methanogen homoaconitase large subunit|Methanosarcina acetivorans

Query: 4 SCTYG 8
SCTYG
Sbjct: 134 SCTYG 138


>sp|HIS2_PYRFU|HISTIDINE biosynthesis bifunctional protein HisIE|Pyrococcus furiosus (strain

Query: 2 NFSCTYGK 9
N+SC Y K
Sbjct: 100 NYSCFYRK 107




19|Sequence|91|100|TYGKPVTFDC

>sp|ECFA2_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 2 YGKPVTFD 9
YGKPV++D
Sbjct: 65 YGKPVSYD 72


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 YGKPVTFD 9
YGKP+T D
Sbjct: 768 YGKPITND 775


>sp|PURT_SACS2|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Saccharolobus

Query: 2 YGKPVTFD 9
+GKPVT++
Sbjct: 359 FGKPVTYE 366


>sp|PURT_SULAC|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Sulfolobus

Query: 2 YGKPVTFD 9
+GKPVT++
Sbjct: 360 FGKPVTYN 367


>sp|RISB_SULTO|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YGKPVTF 8
YGKPVT
Sbjct: 98 YGKPVTL 104


>sp|RISB_SULAC|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YGKPVTF 8
YGKPVT
Sbjct: 101 YGKPVTL 107


>sp|RISB_ARCFU|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YGKPVTF 8
YGKPVT
Sbjct: 96 YGKPVTL 102


>sp|RISB_AERPE|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 YGKPVTF 8
YGKPVT
Sbjct: 100 YGKPVTL 106


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 TYGKPVTFDC 10
T G P +DC
Sbjct: 256 TMGTPTAYDC 265


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 TYGKPVTFDC 10
T G P +DC
Sbjct: 255 TTGTPTAYDC 264


>sp|Y1599_METJA|UNCHARACTERIZED protein MJ1599|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GKPVTFDC 10
GKP+ DC
Sbjct: 20 GKPICVDC 27


>sp|PSA_METKA|PROTEASOME subunit alpha|Methanopyrus kandleri (strain AV19 /

Query: 1 TYGKPVTFD 9
TYG+P+ D
Sbjct: 104 TYGEPIDVD 112


>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YGKPVTF 8
YGKP+ F
Sbjct: 620 YGKPIYF 626


>sp|THIM_PYRFU|HYDROXYETHYLTHIAZOLE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YGKPVTFD 9
YGKP+ D
Sbjct: 85 YGKPLVLD 92


>sp|PURP_METS3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanobrevibacter smithii (strain ATCC

Query: 1 TYGKPVT 7
TYGKP++
Sbjct: 334 TYGKPMS 340


>sp|RL6_PYRHO|LARGE ribosomal subunit protein uL6|Pyrococcus horikoshii (strain ATCC

Query: 3 GKPVTF 8
GKP+TF
Sbjct: 179 GKPITF 184


>sp|RL6_PYRFU|LARGE ribosomal subunit protein uL6|Pyrococcus furiosus (strain ATCC

Query: 3 GKPVTF 8
GKP+TF
Sbjct: 179 GKPITF 184


>sp|RL6_PYRAB|LARGE ribosomal subunit protein uL6|Pyrococcus abyssi (strain GE5 /

Query: 3 GKPVTF 8
GKP+TF
Sbjct: 179 GKPITF 184


>sp|KORB_METTH|2-OXOGLUTARATE synthase subunit KorB|Methanothermobacter thermautotrophicus

Query: 1 TYGKPVTF 8
T+G+P++F
Sbjct: 72 THGRPISF 79


>sp|RPIA_METVS|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus vannielii (strain ATCC 35089

Query: 2 YGKPVTFD 9
YG P +FD
Sbjct: 63 YGVPTSFD 70


>sp|RPIA_METMP|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus maripaludis (strain DSM 14266

Query: 2 YGKPVTFD 9
YG P +FD
Sbjct: 63 YGVPTSFD 70


>sp|RPIA_METM7|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus maripaludis (strain C7 /

Query: 2 YGKPVTFD 9
YG P +FD
Sbjct: 63 YGVPTSFD 70


>sp|RPIA_METM6|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus maripaludis (strain C6 /

Query: 2 YGKPVTFD 9
YG P +FD
Sbjct: 63 YGVPTSFD 70


>sp|RPIA_METM5|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus maripaludis (strain C5 /

Query: 2 YGKPVTFD 9
YG P +FD
Sbjct: 63 YGVPTSFD 70


>sp|MFNA_METLZ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanocorpusculum labreanum

Query: 2 YGKPVTFDC 10
YGK T DC
Sbjct: 138 YGKNYTVDC 146


>sp|PSB2_THESM|PROTEASOME subunit beta 2|Thermococcus sibiricus (strain DSM 12597

Query: 1 TYGKPVT 7
T+GKP+T
Sbjct: 75 TWGKPMT 81


>sp|MDH_CALMQ|MALATE dehydrogenase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 YGKPVT 7
YGKP+T
Sbjct: 187 YGKPLT 192


>sp|Y028_PYRCJ|MEMO1 family protein Pcal_0028|Pyrobaculum calidifontis (strain DSM

Query: 2 YGKPVTF 8
YG P TF
Sbjct: 73 YGAPTTF 79


>sp|SURE_METB6|5'-NUCLEOTIDASE SurE|Methanoregula boonei (strain DSM 21154

Query: 5 PVTFDC 10
P+T DC
Sbjct: 240 PITLDC 245


>sp|DLDH_HALVD|DIHYDROLIPOYL dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 3 GKPVTFD 9
G+PV FD
Sbjct: 343 GEPVAFD 349


>sp|SURE_METMJ|5'-NUCLEOTIDASE SurE|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 PVTFDC 10
P+T DC
Sbjct: 240 PITLDC 245


>sp|IXTPA_METKA|DITP/XTP pyrophosphatase|Methanopyrus kandleri (strain AV19 /

Query: 3 GKPVTF 8
G+PVTF
Sbjct: 118 GRPVTF 123


>sp|KORB_METTM|2-OXOGLUTARATE synthase subunit KorB|Methanothermobacter marburgensis (strain

Query: 1 TYGKPVTF 8
T+G+P+ F
Sbjct: 72 THGRPIAF 79


>sp|AROD_METTH|3-DEHYDROQUINATE dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 YGKPVTF 8
+G P+TF
Sbjct: 187 FGSPITF 193


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YGKPVTFD 9
YGK V FD
Sbjct: 812 YGKYVKFD 819


>sp|SURE_METHJ|5'-NUCLEOTIDASE SurE|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 PVTFDC 10
P+T DC
Sbjct: 258 PITLDC 263


>sp|PSA_THESM|PROTEASOME subunit alpha|Thermococcus sibiricus (strain DSM 12597

Query: 1 TYGKPV 6
TYG+PV
Sbjct: 104 TYGEPV 109


>sp|PSA_THEON|PROTEASOME subunit alpha|Thermococcus onnurineus (strain NA1)

Query: 1 TYGKPV 6
TYG+PV
Sbjct: 104 TYGEPV 109


>sp|PSA_THEKO|PROTEASOME subunit alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 TYGKPV 6
TYG+PV
Sbjct: 104 TYGEPV 109


>sp|PSA_THEK1|PROTEASOME subunit alpha|Thermococcus sp. (strain JCM 11816

Query: 1 TYGKPV 6
TYG+PV
Sbjct: 104 TYGEPV 109


>sp|PSA_THEGJ|PROTEASOME subunit alpha|Thermococcus gammatolerans (strain DSM 15229

Query: 1 TYGKPV 6
TYG+PV
Sbjct: 104 TYGEPV 109


>sp|Y1612_HALMA|UNCHARACTERIZED protein rrnAC1612|Haloarcula marismortui (strain ATCC 43049

Query: 2 YGKPVT 7
YG+PVT
Sbjct: 193 YGEPVT 198


>sp|VHCA_METVO|F420-NON-REDUCING hydrogenase vhc subunit A|Methanococcus voltae

Query: 1 TYGKP 5
TYGKP
Sbjct: 317 TYGKP 321


>sp|ILVC_METJA|KETOL-ACID reductoisomerase (NADP(+))|Methanocaldococcus jannaschii (strain

Query: 2 YGKPVTFD 9
Y K VTFD
Sbjct: 6 YDKDVTFD 13


>sp|KORB_METJA|2-OXOGLUTARATE synthase subunit KorB|Methanocaldococcus jannaschii (strain ATCC

Query: 1 TYGKPVTF 8
T+G+P+ F
Sbjct: 68 THGRPIAF 75


>sp|MCH_METM7|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C7 /

Query: 1 TYGKP 5
TYGKP
Sbjct: 264 TYGKP 268


>sp|MCH_METMP|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 TYGKP 5
TYGKP
Sbjct: 264 TYGKP 268


>sp|MCH_METM5|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 1 TYGKP 5
TYGKP
Sbjct: 264 TYGKP 268


>sp|MCH_METVS|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 1 TYGKP 5
TYGKP
Sbjct: 264 TYGKP 268




20|Sequence|96|105|VTFDCAVKPS

>sp|Y457_METJA|UNCHARACTERIZED metallohydrolase MJ0457|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VTFDCAVKPS 10
V FDC + P+
Sbjct: 277 VVFDCRILPT 286




21|Sequence|101|110|AVKPSVTCVD

>sp|SRP54_METBU|SIGNAL recognition particle 54 kDa|Methanococcoides burtonii (strain DSM

Query: 1 AVKPSVTCVD 10
+KP+V C D
Sbjct: 125 GLKPAVICAD 134


>sp|SRP54_METAR|SIGNAL recognition particle 54 kDa|Methanocella arvoryzae (strain DSM

Query: 1 AVKPSVTCVD 10
+KP+V C D
Sbjct: 125 GLKPAVICAD 134


>sp|G3P_PYRWO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus woesei

Query: 1 AVKPSVT 7
A+KPSVT
Sbjct: 181 AIKPSVT 187


>sp|G3P_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AVKPSVT 7
A+KPSVT
Sbjct: 181 AIKPSVT 187


>sp|G3P_THEON|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 1 AVKPSVT 7
A+KPSVT
Sbjct: 181 AIKPSVT 187


>sp|HMGCS_THESM|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus sibiricus (strain DSM 12597

Query: 1 AVKPSVTCV 9
AVKPS T +
Sbjct: 88 AVKPSATVI 96


>sp|TIAS_SACI2|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Saccharolobus islandicus

Query: 1 AVKPSVT 7
A+KPS+T
Sbjct: 324 AIKPSIT 330


>sp|HMGCS_PYRFU|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AVKPSVTCV 9
AVKPS T +
Sbjct: 88 AVKPSATII 96


>sp|HMGCS_PYRAB|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 AVKPSVTCV 9
AVKPS T +
Sbjct: 88 AVKPSATII 96


>sp|HMGCS_METS3|HYDROXYMETHYLGLUTARYL-COA synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 AVKPSVTCV 9
AVKPS T V
Sbjct: 85 AVKPSATIV 93


>sp|HYPA_METM7|HYDROGENASE maturation factor HypA|Methanococcus maripaludis (strain C7 /

Query: 2 VKPSVTCVD 10
VKP + C+D
Sbjct: 72 VKPKIFCMD 80


>sp|END4_CENSY|PROBABLE endonuclease 4|Cenarchaeum symbiosum (strain A)

Query: 2 VKPSVTCV 9
++PS TCV
Sbjct: 60 IEPSGTCV 67


>sp|Y1428_METJA|TPR repeat-containing protein MJ1428|Methanocaldococcus jannaschii

Query: 3 KPSVTC 8
KP++TC
Sbjct: 482 KPNITC 487


>sp|HYPA_METM5|HYDROGENASE maturation factor HypA|Methanococcus maripaludis (strain C5 /

Query: 2 VKPSVTCVD 10
VKP + C+D
Sbjct: 72 VKPKIFCMD 80


>sp|HYPA_METM6|HYDROGENASE maturation factor HypA|Methanococcus maripaludis (strain C6 /

Query: 2 VKPSVTCVD 10
VKP + C+D
Sbjct: 72 VKPKIFCMD 80


>sp|HYPA_METVS|HYDROGENASE maturation factor HypA|Methanococcus vannielii (strain ATCC 35089

Query: 2 VKPSVTCVD 10
+KP ++C++
Sbjct: 72 IKPKISCLN 80


>sp|HMGCS_AERPE|HYDROXYMETHYLGLUTARYL-COA synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 AVKPSVTCV 9
AVKPS T +
Sbjct: 97 AVKPSATII 105


>sp|Y3887_METAC|UPF0284 protein MA_3887|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VKPSVTCVD 10
V P V C+D
Sbjct: 99 VTPEVPCID 107




22|Sequence|106|115|VTCVDQDFKS

>sp|TRPE_SACS2|ANTHRANILATE synthase component 1|Saccharolobus solfataricus (strain ATCC

Query: 3 CVDQDFK 9
C+++DFK
Sbjct: 18 CIERDFK 24


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 TCVDQDFKS 10
TCV DF++
Sbjct: 298 TCVGDDFEA 306


>sp|NK_METJA|NUCLEOSIDE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VTCVDQDFKS 10
++CV DFK+
Sbjct: 62 LSCVGYDFKN 71




23|Sequence|111|120|QDFKSQKNFI

>sp|AMPD_ARCFU|ANHYDROMEVALONATE phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KSQKNFI 10
K+QKNFI
Sbjct: 4 KTQKNFI 10


>sp|Y1223_PYRHO|UNCHARACTERIZED ZPR1-like protein PH1223|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QDFKSQKN 8
+DFK Q+N
Sbjct: 144 RDFKEQEN 151


>sp|Y1497_METJA|UNCHARACTERIZED metallohydrolase MJ1497|Methanocaldococcus jannaschii (strain ATCC

Query: 2 DFKSQKNF 9
DF SQKN+
Sbjct: 245 DFLSQKNY 252


>sp|RL3_SULTO|LARGE ribosomal subunit protein uL3|Sulfurisphaera tokodaii (strain DSM

Query: 2 DFKSQKNFI 10
D KSQ N++
Sbjct: 179 DIKSQLNYV 187




24|Sequence|116|125|QKNFIINMTC

>sp|FDHD_SULAC|SULFUR carrier protein FdhD|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KNFIINMTC 10
+NF+IN +C
Sbjct: 92 RNFVINSSC 100


>sp|EF2_METTH|ELONGATION factor 2|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 QKNFIINMT 9
+KN INMT
Sbjct: 540 EKNLFINMT 548


>sp|RL11_HALWD|LARGE ribosomal subunit protein uL11|Haloquadratum walsbyi (strain DSM

Query: 1 QKNFIINMT 9
Q+NF+ NM+
Sbjct: 89 QENFVANMS 97


>sp|FTHS_METLZ|FORMATE--TETRAHYDROFOLATE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 KNFIIN 7
KNF+IN
Sbjct: 508 KNFVIN 513




25|Sequence|121|130|INMTCRFCWQ

>sp|ARADH_SACS2|D-ARABINOSE 1-dehydrogenase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 2 NMTCRFC 8
++TCR+C
Sbjct: 99 DLTCRYC 105


>sp|NIFB_METJA|FEMO cofactor biosynthesis protein NifB|Methanocaldococcus jannaschii

Query: 2 NMTCRFC 8
N+ C+FC
Sbjct: 39 NIACKFC 45


>sp|NIFB_METIM|FEMO cofactor biosynthesis protein NifB|Methanocaldococcus infernus

Query: 2 NMTCRFC 8
N+ C+FC
Sbjct: 37 NIACKFC 43


>sp|TYW1_PYRHO|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus horikoshii (strain

Query: 5 CRFCWQ 10
C FCW+
Sbjct: 85 CIFCWR 90


>sp|TYW1_PYRAB|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus abyssi (strain GE5 /

Query: 5 CRFCWQ 10
C FCW+
Sbjct: 85 CIFCWR 90


>sp|ASSY_METKA|ARGININOSUCCINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 5 CRFCWQ 10
C +CW+
Sbjct: 69 CEYCWR 74


>sp|LIPA_SULAC|LIPOYL synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 CRFCW 9
CRFC+
Sbjct: 59 CRFCY 63


>sp|LIPA_SACS2|LIPOYL synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 CRFCW 9
CRFC+
Sbjct: 61 CRFCY 65


>sp|LIPA_AERPE|LIPOYL synthase|Aeropyrum pernix (strain ATCC 700893

Query: 5 CRFCW 9
CRFC+
Sbjct: 62 CRFCY 66


>sp|TYW1_METJA|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Methanocaldococcus jannaschii

Query: 5 CRFCWQ 10
C FCW+
Sbjct: 66 CIFCWR 71


>sp|MOAA_SULAC|PROBABLE GTP 3',8-cyclase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 NMTCRFC 8
N TC FC
Sbjct: 21 NFTCFFC 27


>sp|TFE_METTP|TRANSCRIPTION factor E|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 NMTCRFC 8
N TC FC
Sbjct: 132 NFTCPFC 138


>sp|TTUA_PYRHO|TRNA-5-METHYLURIDINE(54) 2-sulfurtransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 MTCRFC 8
M C+FC
Sbjct: 1 MKCKFC 6


>sp|COFH_METVS|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus vannielii (strain ATCC

Query: 4 TCRFC 8
TC+FC
Sbjct: 62 TCKFC 66


>sp|COFH_METM5|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C5

Query: 4 TCRFC 8
TC+FC
Sbjct: 62 TCKFC 66


>sp|COFH_METAR|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocella arvoryzae (strain DSM

Query: 4 TCRFC 8
TC+FC
Sbjct: 63 TCKFC 67


>sp|COFH1_METMP|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanococcus maripaludis (strain

Query: 4 TCRFC 8
TC+FC
Sbjct: 62 TCKFC 66


>sp|Y114_METTH|UNCHARACTERIZED protein MTH_114|Methanothermobacter thermautotrophicus (strain

Query: 5 CRFCW 9
C +CW
Sbjct: 17 CSYCW 21


>sp|TTUA_METJA|TRNA-5-METHYLURIDINE(54) 2-sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 MTCRFC 8
M C+FC
Sbjct: 5 MKCKFC 10


>sp|THII_METJA|PROBABLE tRNA sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NMTCRFC 8
N TC FC
Sbjct: 269 NYTCIFC 275


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 1 INMTCRFCWQ 10
I + C FC Q
Sbjct: 690 ITLECGFCHQ 699




26|Sequence|126|135|RFCWQLPETD

>sp|RADA_HALWD|DNA repair and recombination protein|Haloquadratum walsbyi (strain

Query: 1 RFCWQLPETD 10
+ W++PE D
Sbjct: 81 KLSWKIPEVD 90


>sp|GATD_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanothermobacter thermautotrophicus

Query: 1 RFCWQLPETD 10
+ CW L +TD
Sbjct: 398 KMCWVLGQTD 407


>sp|PDXS_SACS2|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus solfataricus

Query: 3 CWQLPE 8
CW+ PE
Sbjct: 299 CWEYPE 304


>sp|PDXS_SACI7|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 3 CWQLPE 8
CW+ PE
Sbjct: 299 CWEYPE 304


>sp|PDXS_SACI6|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 3 CWQLPE 8
CW+ PE
Sbjct: 299 CWEYPE 304


>sp|PDXS_SACI4|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 3 CWQLPE 8
CW+ PE
Sbjct: 299 CWEYPE 304


>sp|PDXS_SACI3|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 3 CWQLPE 8
CW+ PE
Sbjct: 299 CWEYPE 304


>sp|PDXS_SACI2|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 3 CWQLPE 8
CW+ PE
Sbjct: 299 CWEYPE 304


>sp|PDXS_SACI1|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 3 CWQLPE 8
CW+ PE
Sbjct: 299 CWEYPE 304


>sp|PURQ_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanothrix thermoacetophila (strain DSM

Query: 2 FCWQLP 7
F WQLP
Sbjct: 229 FAWQLP 234


>sp|RADA_HALSA|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 1 RFCWQLPETD 10
+ W +PE D
Sbjct: 81 KLTWNIPEVD 90


>sp|RADA_HALS3|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 1 RFCWQLPETD 10
+ W +PE D
Sbjct: 81 KLTWNIPEVD 90


>sp|TFE_NANEQ|TRANSCRIPTION factor E|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 WQLPETD 10
WQL ETD
Sbjct: 76 WQLLETD 82


>sp|SYE_META3|GLUTAMATE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FCWQLPE 8
F W++PE
Sbjct: 313 FGWEMPE 319


>sp|SYE_METJA|GLUTAMATE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FCWQLPE 8
F W++PE
Sbjct: 305 FGWEMPE 311


>sp|SYE_METMP|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 FCWQLPE 8
F W++PE
Sbjct: 307 FGWEIPE 313


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 FCWQLPE 8
F W++PE
Sbjct: 307 FGWEIPE 313


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 FCWQLPE 8
F W++PE
Sbjct: 307 FGWEIPE 313


>sp|SYE_METM5|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 FCWQLPE 8
F W++PE
Sbjct: 307 FGWEIPE 313


>sp|LRS14_SACS2|HTH-TYPE transcriptional regulator lrs14|Saccharolobus solfataricus

Query: 2 FCWQLPETD 10
FC+ + +TD
Sbjct: 24 FCYDISDTD 32


>sp|FRHG_METTH|COENZYME F420 hydrogenase subunit gamma|Methanothermobacter

Query: 4 WQLPETD 10
W++PE D
Sbjct: 52 WEMPEMD 58


>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC 700922

Query: 4 WQLPETD 10
W L ETD
Sbjct: 541 WDLEETD 547


>sp|CRUF_HALJT|BISANHYDROBACTERIORUBERIN hydratase|Haloarcula japonica (strain ATCC 49778

Query: 4 WQLPET 9
W LPET
Sbjct: 12 WTLPET 17




27|Sequence|131|140|LPETDYECTN

>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 2 PETDYECT 9
PETD+EC+
Sbjct: 251 PETDHECS 258


>sp|ADEC_METB6|ADENINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 2 PETDYECT 9
P++D+ECT
Sbjct: 215 PDSDHECT 222


>sp|ADEC_METS3|ADENINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 TDYECTN 10
TD+EC+N
Sbjct: 199 TDHECSN 205


>sp|ADEC_METTP|ADENINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LPETDYECT 9
L E D+ECT
Sbjct: 213 LIEDDHECT 221


>sp|PURA_PICTO|ADENYLOSUCCINATE synthetase|Picrophilus torridus (strain ATCC 700027

Query: 4 TDYECTN 10
TDY C+N
Sbjct: 19 TDYLCSN 25


>sp|HPRL2_HALVD|HGPRTASE-LIKE protein 2|Haloferax volcanii (strain ATCC 29605

Query: 1 LPETDYECTN 10
L +TDYE T+
Sbjct: 158 LDDTDYEATS 167


>sp|TIAS_METLZ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocorpusculum labreanum

Query: 1 LPETDYEC 8
LP+ YEC
Sbjct: 156 LPDKTYEC 163


>sp|ADEC_METMJ|ADENINE deaminase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 ETDYECT 9
++D+ECT
Sbjct: 176 QSDHECT 182


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 PETDYECTN 10
PE DY+ N
Sbjct: 817 PEIDYKAIN 825


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PETDYECTN 10
PE +YE +N
Sbjct: 561 PEDEYEFSN 569


>sp|IDI2_HALSA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LPETDYECTN 10
LPE DY+ +
Sbjct: 42 LPELDYDAID 51


>sp|Y231_METJA|UNCHARACTERIZED protein MJ0231|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ETDYEC 8
ET YEC
Sbjct: 168 ETSYEC 173


>sp|TIAS_METJA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocaldococcus jannaschii

Query: 4 TDYECTN 10
TD+EC N
Sbjct: 87 TDFECEN 93


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 TDYECTN 10
TDY C N
Sbjct: 287 TDYYCRN 293


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PETDYECTN 10
PET Y TN
Sbjct: 217 PETIYGATN 225


>sp|SYS_METMA|SERINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LPETDYE 7
+PET YE
Sbjct: 287 MPETSYE 293


>sp|ARFB_META3|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus aeolicus (strain ATCC

Query: 1 LPETDYE 7
LP T+YE
Sbjct: 81 LPSTEYE 87




28|Sequence|136|145|YECTNSTSCM

>sp|Y2210_ARCFU|UNCHARACTERIZED protein AF_2210|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ECTNSTSC 9
+CTNST+C
Sbjct: 31 DCTNSTNC 38


>sp|GLMM_METJA|PHOSPHOGLUCOSAMINE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ECTNSTSCM 10
+C N+++C+
Sbjct: 165 DCANASACL 173




29|Sequence|141|150|STSCMTVSCP

>sp|OTC_METST|ORNITHINE carbamoyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 MTVSCP 10
MTV+CP
Sbjct: 172 MTVACP 177


>sp|Y890_METJA|UPF0148 protein MJ0890|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 STSCMTVSCP 10
ST C CP
Sbjct: 38 STHCSKCGCP 47


>sp|QUEE_METHJ|7-CARBOXY-7-DEAZAGUANINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 CMTVSCP 10
CM V CP
Sbjct: 145 CMDVKCP 151


>sp|CARA_METM7|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C7

Query: 2 TSCMTVSC 9
TSC+ + C
Sbjct: 171 TSCVLIDC 178


>sp|RS17_METMJ|SMALL ribosomal subunit protein uS17|Methanoculleus marisnigri (strain

Query: 1 STSCMTVSCP 10
T C V+CP
Sbjct: 13 ETECEDVNCP 22




30|Sequence|146|155|TVSCPRQRYP

>sp|FRHG_METVO|COENZYME F420 hydrogenase subunit gamma|Methanococcus voltae

Query: 1 TVSCPRQRYP 10
+ CPR R+P
Sbjct: 227 SAQCPRVRFP 236


>sp|FRHG_METJA|COENZYME F420 hydrogenase subunit gamma|Methanocaldococcus jannaschii

Query: 1 TVSCPRQRYP 10
+V CPR R+P
Sbjct: 214 SVQCPRIRFP 223


>sp|GUAAA_METB6|GMP synthase [glutamine-hydrolyzing] subunit A|Methanoregula boonei

Query: 2 VSCPRQR 8
V+CPR+R
Sbjct: 149 VACPRKR 155


>sp|Y226_ARCFU|PUTATIVE NADH dehydrogenase/NAD(P)H nitroreductase AF_0226|Archaeoglobus

Query: 5 PRQRYP 10
PR RYP
Sbjct: 157 PRNRYP 162


>sp|DNLJ_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 2 VSCPRQR 8
+SCP QR
Sbjct: 445 LSCPAQR 451


>sp|FRHG_METTH|COENZYME F420 hydrogenase subunit gamma|Methanothermobacter

Query: 2 VSCPRQRYP 10
V CPR +P
Sbjct: 218 VQCPRSWWP 226




31|Sequence|151|160|RQRYPANCTV

>sp|AROA_METST|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 2 QRYPANCTV 10
QRYP C V
Sbjct: 64 QRYPDKCIV 72


>sp|SYR_META3|ARGININE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 RYPANCTV 10
RY ANC +
Sbjct: 529 RYYANCPI 536


>sp|DCDB_METM5|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain C5 /

Query: 1 RQRYPANCTV 10
+++Y NC V
Sbjct: 83 KEKYNVNCVV 92




32|Sequence|156|165|ANCTVRDHVH

>sp|GATB_METHJ|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanospirillum hungatei JF-1 (strain

Query: 2 NCTVRD 7
NCT+RD
Sbjct: 69 NCTIRD 74


>sp|UPP_HALSA|URACIL phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 3 CTVRDHV 9
CTV DHV
Sbjct: 155 CTVLDHV 161


>sp|UPP_HALS3|URACIL phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 3 CTVRDHV 9
CTV DHV
Sbjct: 155 CTVLDHV 161


>sp|DTDA_METB6|D-AMINOACYL-TRNA deacylase|Methanoregula boonei (strain DSM 21154

Query: 1 ANCTVRDHV 9
A CT+R H+
Sbjct: 13 AGCTIRRHI 21


>sp|NEP_NATMA|HALOLYSIN-LIKE extracellular serine protease Nep|Natrialba magadii

Query: 1 ANCTVRDHVH 10
+N +RDH+H
Sbjct: 372 SNDELRDHLH 381


>sp|GGR_METB6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoregula boonei (strain DSM 21154

Query: 3 CTVRDHV 9
CTV DH+
Sbjct: 269 CTVADHL 275


>sp|SYC_THEVO|CYSTEINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 TVRDHVH 10
TV+DH H
Sbjct: 30 TVQDHFH 36


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 TVRDHVH 10
TV+DH H
Sbjct: 30 TVQDHFH 36


>sp|APGM_THEVO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 CTVRDH 8
C+V+DH
Sbjct: 346 CSVKDH 351


>sp|APGM_METMJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanoculleus marisnigri (strain ATCC

Query: 3 CTVRDH 8
C+V+DH
Sbjct: 350 CSVKDH 355


>sp|HELS_NATPD|ATP-DEPENDENT DNA helicase Hel308|Natronomonas pharaonis (strain ATCC 35678

Query: 2 NCTVRDHVH 10
+C V D VH
Sbjct: 140 DCVVADEVH 148


>sp|GATE_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma acidophilum (strain ATCC

Query: 2 NCTVRDHV 9
NC + DH+
Sbjct: 99 NCDIVDHI 106


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 2 NCTVRDHVH 10
+C V D VH
Sbjct: 149 SCVVADEVH 157


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 2 NCTVRDHVH 10
+C V D VH
Sbjct: 149 SCVVADEVH 157


>sp|CAS1_HYPBU|CRISPR-ASSOCIATED endonuclease Cas1|Hyperthermus butylicus (strain DSM 5456

Query: 4 TVRDHVH 10
T+RDH++
Sbjct: 301 TLRDHIY 307


>sp|HELS_HALMA|ATP-DEPENDENT DNA helicase Hel308|Haloarcula marismortui (strain ATCC 43049

Query: 3 CTVRDHVH 10
C V D VH
Sbjct: 141 CVVTDEVH 148


>sp|UPP_HALWD|URACIL phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 CTVRDHVH 10
C V DHV+
Sbjct: 155 CAVLDHVN 162




33|Sequence|161|170|RDHVHCLGNR

>sp|CBIA_METM7|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C7 /

Query: 3 HVHCLGN 9
H HC+GN
Sbjct: 431 HQHCIGN 437


>sp|CBIA_METM5|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C5 /

Query: 3 HVHCLGN 9
H HC+GN
Sbjct: 431 HQHCIGN 437


>sp|GLCD1_HALTV|GLUCOSE 1-dehydrogenase 1|Haloterrigena turkmenica (strain ATCC 51198

Query: 2 DHVHCLGNR 10
D V+CLG R
Sbjct: 200 DRVYCLGRR 208


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 4 VHCLGNR 10
+HC+G+R
Sbjct: 392 IHCVGSR 398


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 4 VHCLGNR 10
+HC+G+R
Sbjct: 393 IHCVGSR 399


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 4 VHCLGNR 10
+HC+G+R
Sbjct: 389 IHCVGSR 395


>sp|CS3HE_THETK|CRISPR-ASSOCIATED helicase Cas3|Thermoproteus tenax (strain ATCC 35583

Query: 3 HVHCLGNR 10
H+ CLG R
Sbjct: 223 HIPCLGGR 230


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 2 DHVHCL 7
DHV+CL
Sbjct: 1123 DHVYCL 1128


>sp|DTDA_METMA|D-AMINOACYL-TRNA deacylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 VHCLGN 9
VHC GN
Sbjct: 106 VHCTGN 111


>sp|DTDA_METBF|D-AMINOACYL-TRNA deacylase|Methanosarcina barkeri (strain Fusaro /

Query: 4 VHCLGN 9
VHC GN
Sbjct: 117 VHCTGN 122


>sp|DTDA_METAC|D-AMINOACYL-TRNA deacylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 VHCLGN 9
VHC GN
Sbjct: 106 VHCTGN 111


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 3 HVHCLGN 9
+VHCL N
Sbjct: 97 YVHCLEN 103


>sp|GSA_HALWD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DHVHCLGNR 10
DHV+ LG R
Sbjct: 320 DHVNRLGER 328


>sp|PUS10_METTM|TRNA pseudouridine synthase Pus10|Methanothermobacter marburgensis

Query: 5 HCLGNR 10
HCLG R
Sbjct: 21 HCLGRR 26


>sp|TRM1_HALWD|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloquadratum walsbyi

Query: 5 HCLGNR 10
HC GNR
Sbjct: 269 HCEGNR 274


>sp|GLCDH_HALMT|GLUCOSE 1-dehydrogenase|Haloferax mediterranei (strain ATCC 33500

Query: 2 DHVHCLGNR 10
++++CLG R
Sbjct: 200 ENLYCLGRR 208


>sp|HELS_PYRHO|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DHVHCLGNR 10
D +H +G+R
Sbjct: 145 DEIHLIGSR 153


>sp|HELS_PYRFU|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DHVHCLGNR 10
D +H +G+R
Sbjct: 145 DEIHLIGSR 153


>sp|HELS_PYRAB|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus abyssi (strain GE5 /

Query: 2 DHVHCLGNR 10
D +H +G+R
Sbjct: 145 DEIHLIGSR 153


>sp|RL2_METST|LARGE ribosomal subunit protein uL2|Methanosphaera stadtmanae (strain

Query: 2 DHVHCLGNR 10
DH H GNR
Sbjct: 202 DHPHGGGNR 210


>sp|RL2_METS3|LARGE ribosomal subunit protein uL2|Methanobrevibacter smithii (strain

Query: 2 DHVHCLGNR 10
DH H GNR
Sbjct: 202 DHPHGGGNR 210




34|Sequence|166|175|CLGNRTFPKM

>sp|Y2356_ARCFU|UPF0310 protein AF_2356|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LGNRTFP 8
+GN TFP
Sbjct: 83 MGNETFP 89


>sp|CAS5_THETK|CRISPR-ASSOCIATED protein Cas5|Thermoproteus tenax (strain ATCC 35583

Query: 1 CLGNRTFPK 9
CLG FP+
Sbjct: 214 CLGEAVFPE 222


>sp|IXTPA_ARCFU|DITP/XTP pyrophosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GNRTFPKM 10
GN+TF +M
Sbjct: 147 GNKTFAEM 154


>sp|Y2171_ARCFU|UNCHARACTERIZED protein AF_2171|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LGNRTFPKM 10
+GNRT+ K+
Sbjct: 84 IGNRTYIKI 92




35|Sequence|171|180|TFPKMLYCNW

>sp|PCKG_THEAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PKMLYCNW 10
PK+ Y NW
Sbjct: 479 PKIFYVNW 486


>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PKMLYCNW 10
PK+ Y NW
Sbjct: 479 PKIFYVNW 486


>sp|GLMM_METMA|PROBABLE phosphoglucosamine mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FPKMLYC 8
FPK+ YC
Sbjct: 316 FPKISYC 322


>sp|GLMM_METBU|PROBABLE phosphoglucosamine mutase|Methanococcoides burtonii (strain DSM

Query: 2 FPKMLYC 8
FPK+ YC
Sbjct: 315 FPKISYC 321


>sp|GLMM_METBF|PROBABLE phosphoglucosamine mutase|Methanosarcina barkeri (strain Fusaro /

Query: 2 FPKMLYC 8
FPK+ YC
Sbjct: 316 FPKISYC 322


>sp|GLMM_METAC|PROBABLE phosphoglucosamine mutase|Methanosarcina acetivorans (strain ATCC

Query: 2 FPKMLYC 8
FPK+ YC
Sbjct: 316 FPKISYC 322


>sp|Y1016_ARCFU|UNCHARACTERIZED protein AF_1016|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FPKMLYCNW 10
F M+YC W
Sbjct: 142 FCLMVYCAW 150


>sp|Y785_METJA|UNCHARACTERIZED protein MJ0785|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PKMLYCNW 10
PK LYC +
Sbjct: 96 PKCLYCGF 103


>sp|GLMM_METAR|PROBABLE phosphoglucosamine mutase|Methanocella arvoryzae (strain DSM 22066

Query: 2 FPKMLYC 8
FP++ YC
Sbjct: 312 FPRISYC 318


>sp|Y2221_ARCFU|UNCHARACTERIZED protein AF_2221|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TFPKMLYCN 9
TFPK CN
Sbjct: 176 TFPKGDQCN 184


>sp|DHYS_METJA|PROBABLE deoxyhypusine synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 FPKMLYC 8
FP ++YC
Sbjct: 321 FPLLVYC 327


>sp|SYT_META3|THREONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 TFPKMLYCN 9
T+P +L+C+
Sbjct: 469 TYPVILHCS 477


>sp|ARTD_METJA|PROBABLE archaeosortase D|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TFPKMLYCNW 10
FP L+ NW
Sbjct: 130 IFPIALFLNW 139




36|Sequence|176|185|LYCNWTGGYK

>sp|RNP4_SULTO|RIBONUCLEASE P protein component 4|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LYCNWTGGYK 10
LYC WT YK
Sbjct: 87 LYCGWTRRYK 96


>sp|Y358_METJA|UNCHARACTERIZED protein MJ0358|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LYCNWTGGYK 10
+YC + GYK
Sbjct: 88 MYCKFRKGYK 97


>sp|Y795_METJA|UNCHARACTERIZED protein MJ0795|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YCNWTGG 8
YCN+T G
Sbjct: 112 YCNYTKG 118


>sp|PYRI_METMJ|ASPARTATE carbamoyltransferase regulatory chain|Methanoculleus marisnigri

Query: 1 LYCNW 5
LYC+W
Sbjct: 140 LYCDW 144


>sp|SURE_CALMQ|5'-NUCLEOTIDASE SurE|Caldivirga maquilingensis (strain ATCC 700844

Query: 5 WTGGY 9
W+GGY
Sbjct: 183 WSGGY 187


>sp|THII_SACS2|PROBABLE tRNA sulfurtransferase|Saccharolobus solfataricus (strain ATCC

Query: 5 WTGGYK 10
W+GG+K
Sbjct: 221 WSGGHK 226


>sp|THII_SACI7|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 5 WTGGYK 10
W+GG+K
Sbjct: 223 WSGGHK 228


>sp|THII_SACI6|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 5 WTGGYK 10
W+GG+K
Sbjct: 223 WSGGHK 228


>sp|THII_SACI4|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 5 WTGGYK 10
W+GG+K
Sbjct: 223 WSGGHK 228


>sp|THII_SACI3|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain M.16.27)

Query: 5 WTGGYK 10
W+GG+K
Sbjct: 223 WSGGHK 228


>sp|THII_SACI2|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 WTGGYK 10
W+GG+K
Sbjct: 223 WSGGHK 228


>sp|THII_SACI1|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 5 WTGGYK 10
W+GG+K
Sbjct: 223 WSGGHK 228


>sp|NREA_ARCFU|DNA repair protein NreA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YCNWTGGY 9
Y N +GGY
Sbjct: 295 YSNLSGGY 302


>sp|PURQ_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanothrix thermoacetophila (strain DSM

Query: 2 YCNWT 6
YC WT
Sbjct: 126 YCAWT 130


>sp|AROD_METJA|3-DEHYDROQUINATE dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NWTGGY 9
+W GGY
Sbjct: 58 DWEGGY 63


>sp|RNP4_SACI7|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 LYCNWTGGY 9
L CNW Y
Sbjct: 84 LICNWQRRY 92


>sp|RNP4_SACI6|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LYCNWTGGY 9
L CNW Y
Sbjct: 84 LICNWQRRY 92


>sp|RNP4_SACI4|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LYCNWTGGY 9
L CNW Y
Sbjct: 84 LICNWQRRY 92


>sp|RNP4_SACI3|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain M.16.27)

Query: 1 LYCNWTGGY 9
L CNW Y
Sbjct: 84 LICNWQRRY 92


>sp|RNP4_SACI2|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LYCNWTGGY 9
L CNW Y
Sbjct: 84 LICNWQRRY 92


>sp|RNP4_SACI1|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 LYCNWTGGY 9
L CNW Y
Sbjct: 84 LICNWQRRY 92


>sp|RNP4_SACS2|RIBONUCLEASE P protein component 4|Saccharolobus solfataricus (strain ATCC

Query: 1 LYCNWTGGY 9
L CNW Y
Sbjct: 84 LICNWQRRY 92


>sp|FSX1_HALS0|FUSEXIN 1|Haloferax sp. (strain Q22)

Query: 5 WTGGYK 10
WTG YK
Sbjct: 156 WTGQYK 161




37|Sequence|181|190|TGGYKWSTAL

>sp|HCGF_METTH|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanothermobacter

Query: 2 GGYKWS 7
GGY WS
Sbjct: 28 GGYSWS 33


>sp|SECD_METKA|PROTEIN-EXPORT membrane protein SecD|Methanopyrus kandleri (strain AV19 /

Query: 2 GGYKWS 7
GGY+WS
Sbjct: 136 GGYQWS 141


>sp|TRPB_THEON|TRYPTOPHAN synthase beta chain|Thermococcus onnurineus (strain NA1)

Query: 1 TGGYKWSTAL 10
TG +W TAL
Sbjct: 133 TGAGQWGTAL 142


>sp|TRPB2_PYRFU|TRYPTOPHAN synthase beta chain 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TGGYKWSTAL 10
TG +W TAL
Sbjct: 133 TGAGQWGTAL 142


>sp|TRPB2_METTH|TRYPTOPHAN synthase beta chain 2|Methanothermobacter thermautotrophicus

Query: 1 TGGYKWSTAL 10
TG +W TAL
Sbjct: 133 TGAGQWGTAL 142


>sp|TRPB_PYRHO|TRYPTOPHAN synthase beta chain|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TGGYKWSTAL 10
TG +W TAL
Sbjct: 144 TGAGQWGTAL 153


>sp|SYFA_THEAC|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 GYKWSTA 9
GY+WS A
Sbjct: 315 GYRWSDA 321


>sp|SYR_METAR|ARGININE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 4 YKWSTAL 10
+KW TAL
Sbjct: 435 FKWETAL 441


>sp|GGR_METTP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GGYKWS 7
GGY WS
Sbjct: 204 GGYVWS 209


>sp|SYFA_THEVO|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GYKWST 8
GY+WS+
Sbjct: 309 GYRWSS 314


>sp|IDI2_METTP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 TGGYKWS 7
TGG WS
Sbjct: 213 TGGTSWS 219


>sp|GGR_HALVD|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Haloferax volcanii (strain ATCC 29605

Query: 2 GGYKW 6
GGY W
Sbjct: 204 GGYSW 208


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 YKWSTAL 10
+ WSTAL
Sbjct: 372 FSWSTAL 378


>sp|TRPB1_SULTO|TRYPTOPHAN synthase beta chain 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TGGYKWSTAL 10
TG +W TA+
Sbjct: 130 TGAGQWGTAV 139


>sp|TRPB1_SACS2|TRYPTOPHAN synthase beta chain 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TGGYKWSTAL 10
TG +W TA+
Sbjct: 131 TGAGQWGTAV 140


>sp|COBS_METBF|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GGYKWS 7
GG+KW+
Sbjct: 273 GGFKWT 278




38|Sequence|186|195|WSTALALSIT

>sp|RU1PA_HALXS|RIBULOSE-1-PHOSPHATE aldolase|Halopiger xanaduensis (strain DSM 18323

Query: 1 WSTALALS 8
W+TALA++
Sbjct: 104 WATALAVA 111




39|Sequence|191|200|ALSITLGGFG

>sp|MCRZ_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 5 TLGGFG 10
TLGGFG
Sbjct: 245 TLGGFG 250


>sp|MTAP_CENSY|S-METHYL-5'-THIOADENOSINE phosphorylase|Cenarchaeum symbiosum (strain A)

Query: 3 SITLGGFG 10
+ITLGG G
Sbjct: 20 TITLGGIG 27


>sp|Y1433_ARCFU|UPF0215 protein AF_1433|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 ITLGGF 9
ITLGGF
Sbjct: 70 ITLGGF 75


>sp|Y1210_METJA|UNCHARACTERIZED protein MJ1210|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 TLGGFG 10
TLGGFG
Sbjct: 122 TLGGFG 127


>sp|MCRZ_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 5 TLGGFG 10
T+GGFG
Sbjct: 245 TMGGFG 250


>sp|RL3_METBF|LARGE ribosomal subunit protein uL3|Methanosarcina barkeri (strain Fusaro

Query: 5 TLGGFG 10
TLGGFG
Sbjct: 237 TLGGFG 242


>sp|MCRZ_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 5 TLGGFG 10
T+GGFG
Sbjct: 245 TIGGFG 250


>sp|BASB_HALS3|CHEMOTACTIC signal transduction system substrate-binding|Halobacterium

Query: 3 SITLGGFG 10
SIT+G FG
Sbjct: 346 SITVGDFG 353


>sp|Y1595_METJA|UPF0104 membrane protein MJ1595|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ALSITLGGFG 10
LSIT GFG
Sbjct: 271 VLSITPSGFG 280




40|Sequence|196|205|LGGFGADRFY

>sp|MCRZ_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 LGGFGADRF 9
LGGFG D F
Sbjct: 246 LGGFGMDVF 254


>sp|SYDND_METVS|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GFGADRF 9
G GADRF
Sbjct: 407 GLGADRF 413


>sp|SYDND_METMP|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GFGADRF 9
G GADRF
Sbjct: 407 GLGADRF 413


>sp|SYDND_METM7|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C7 /

Query: 3 GFGADRF 9
G GADRF
Sbjct: 407 GLGADRF 413


>sp|SYDND_METM6|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C6 /

Query: 3 GFGADRF 9
G GADRF
Sbjct: 407 GLGADRF 413


>sp|SYDND_METM5|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C5 /

Query: 3 GFGADRF 9
G GADRF
Sbjct: 407 GLGADRF 413


>sp|SYDND_METJA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GFGADRF 9
G GADRF
Sbjct: 407 GLGADRF 413


>sp|IF2P_SULTO|PROBABLE translation initiation factor IF-2|Sulfurisphaera tokodaii (strain

Query: 3 GFGADRF 9
GF ADRF
Sbjct: 183 GFNADRF 189


>sp|ARGC_METVS|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LGGFGADRF 9
+GGF DRF
Sbjct: 291 IGGFEIDRF 299


>sp|GATE_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma volcanium (strain ATCC

Query: 2 GGFGADRFY 10
GGF RFY
Sbjct: 265 GGFDRSRFY 273


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 LGGFGADRF 9
L GFG D F
Sbjct: 864 LNGFGVDEF 872


>sp|MCRZ_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 LGGFGADRF 9
+GGFG D F
Sbjct: 246 MGGFGMDVF 254


>sp|IMDH_METJA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GFGADRFY 10
G GADR++
Sbjct: 400 GAGADRYF 407


>sp|GMS_METOI|GMGT synthase|Methanothermococcus okinawensis (strain DSM 14208

Query: 1 LGGFGADRFY 10
+GG G RFY
Sbjct: 367 IGGCGCGRFY 376


>sp|IF2P_METB6|PROBABLE translation initiation factor IF-2|Methanoregula boonei (strain DSM

Query: 3 GFGADRF 9
GF ADR+
Sbjct: 176 GFSADRY 182


>sp|WTPA_PYRFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LGGFGADRFY 10
LG F ++FY
Sbjct: 256 LGDFSKEKFY 265


>sp|Y1259_THEVO|UPF0292 protein TV1259|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GGFGADRFY 10
G F DRFY
Sbjct: 67 GSFLKDRFY 75


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 1 LGGFGADRFY 10
+GG GAD Y
Sbjct: 555 IGGLGADYEY 564


>sp|CAS1B_METHJ|PUTATIVE CRISPR-associated endonuclease Cas1 2|Methanospirillum hungatei

Query: 1 LGGFGA 6
+GGFGA
Sbjct: 1 MGGFGA 6


>sp|RL3_METBF|LARGE ribosomal subunit protein uL3|Methanosarcina barkeri (strain Fusaro

Query: 1 LGGFGADR 8
LGGFG R
Sbjct: 238 LGGFGLRR 245


>sp|MCRZ_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 1 LGGFGADRF 9
+GGFG + F
Sbjct: 246 IGGFGMEVF 254


>sp|LEUC_PYRCJ|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum calidifontis (strain DSM

Query: 1 LGGFGADRF 9
LG FGA+ F
Sbjct: 179 LGAFGAEGF 187


>sp|HIS8_METST|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LGGFGADRFY 10
+GG GAD +
Sbjct: 89 IGGDGADELF 98


>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GGFGAD 7
GGFGA+
Sbjct: 305 GGFGAE 310


>sp|UREND_METTH|DNA uridine endonuclease|Methanothermobacter thermautotrophicus

Query: 3 GFGADRF 9
GFG +RF
Sbjct: 85 GFGVERF 91




41|Sequence|201|210|ADRFYLGQWR

>sp|UDP_THEKO|URIDINE phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DRFYLGQWR 10
D FYLGQ R
Sbjct: 170 DSFYLGQGR 178


>sp|TMCA_AERPE|TRNA(MET) cytidine acetyltransferase TmcA|Aeropyrum pernix (strain ATCC

Query: 3 RFYLGQWR 10
RF+ G+WR
Sbjct: 201 RFFRGRWR 208


>sp|TRM56_STAMF|TRNA (cytidine(56)-2'-O)-methyltransferase|Staphylothermus marinus

Query: 2 DRFYLGQ 8
DRFY+G+
Sbjct: 144 DRFYMGK 150


>sp|PYRE_PYRIL|OROTATE phosphoribosyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 5 YLGQWR 10
YL QWR
Sbjct: 187 YLAQWR 192


>sp|TRM56_AERPE|TRNA (cytidine(56)-2'-O)-methyltransferase|Aeropyrum pernix (strain ATCC

Query: 2 DRFYLGQWR 10
DR + G+WR
Sbjct: 151 DRLFRGEWR 159


>sp|Y1582_ARCFU|UNCHARACTERIZED protein AF_1582|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 YLGQW 9
Y+GQW
Sbjct: 62 YMGQW 66


>sp|PYRE_PYRAE|OROTATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 YLGQWR 10
YL QWR
Sbjct: 187 YLSQWR 192


>sp|Y2179_THEKO|UNCHARACTERIZED protein TK2179|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ADRFYLGQW 9
AD F +G W
Sbjct: 222 ADGFIVGTW 230


>sp|PRIS_SULTO|DNA primase small subunit PriS|Sulfurisphaera tokodaii (strain DSM

Query: 2 DRFYLGQW 9
D+F G+W
Sbjct: 255 DKFEYGEW 262


>sp|PYRE_PYRAR|OROTATE phosphoribosyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 YLGQWR 10
YL QWR
Sbjct: 186 YLSQWR 191




42|Sequence|206|215|LGQWREGLGK

>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 WREGLGK 10
WREGL K
Sbjct: 757 WREGLTK 763


>sp|SYS_METST|SERINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 WREGL 8
WREGL
Sbjct: 38 WREGL 42


>sp|Y1016_METJA|UNCHARACTERIZED protein MJ1016|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGQWREG 7
+G WREG
Sbjct: 218 IGFWREG 224


>sp|GATB_HALMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloarcula marismortui (strain ATCC

Query: 5 REGLGK 10
REGLGK
Sbjct: 438 REGLGK 443


>sp|TYW3_ARCFU|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 LGQWREGL 8
LG+W EG+
Sbjct: 67 LGKWHEGV 74


>sp|Y643_PYRHO|UNCHARACTERIZED protein PH0643|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 WREGLGK 10
W EG+GK
Sbjct: 211 WIEGIGK 217


>sp|GGR_METTP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 QWREGLGK 10
+WRE +GK
Sbjct: 324 RWRESIGK 331


>sp|PYRG_PYRFU|CTP synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 REGLGK 10
REGLGK
Sbjct: 252 REGLGK 257


>sp|PYRG_PYRHO|CTP synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 REGLGK 10
REGLGK
Sbjct: 252 REGLGK 257


>sp|PYRG_PYRAB|CTP synthase|Pyrococcus abyssi (strain GE5 /

Query: 5 REGLGK 10
REGLGK
Sbjct: 252 REGLGK 257


>sp|G6PI_METMP|PROBABLE glucose-6-phosphate isomerase|Methanococcus maripaludis (strain DSM

Query: 4 WREGLGK 10
W E LGK
Sbjct: 278 WAESLGK 284


>sp|G6PI_HALWD|PROBABLE glucose-6-phosphate isomerase|Haloquadratum walsbyi (strain DSM

Query: 4 WREGLGK 10
W E LGK
Sbjct: 269 WAESLGK 275


>sp|G6PI_HALSA|PROBABLE glucose-6-phosphate isomerase|Halobacterium salinarum (strain ATCC

Query: 4 WREGLGK 10
W E LGK
Sbjct: 270 WAESLGK 276


>sp|SAMP2_PYRFU|SMALL archaeal modifier protein 2|Pyrococcus furiosus (strain ATCC

Query: 3 QWREGL 8
+WREG+
Sbjct: 18 EWREGM 23


>sp|PDXT_METAR|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanocella arvoryzae (strain

Query: 4 WREGLGK 10
WREG+ +
Sbjct: 59 WREGIAQ 65


>sp|G6PI_HALMA|PROBABLE glucose-6-phosphate isomerase|Haloarcula marismortui (strain ATCC

Query: 4 WREGLGK 10
W E LGK
Sbjct: 270 WAESLGK 276




43|Sequence|211|220|EGLGKLFSFG

>sp|DLYKI_THEX4|D-LYXOSE ketol-isomerase|Thermofilum sp. (strain ex4484_79)

Query: 2 GLGKLFSFG 10
GLG L++FG
Sbjct: 39 GLGVLYTFG 47


>sp|Y286_METJA|UNCHARACTERIZED protein MJ0286|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGLGKLFSF 9
EG+ +LFSF
Sbjct: 68 EGINRLFSF 76


>sp|RL12_HALMA|LARGE ribosomal subunit protein P1|Haloarcula marismortui (strain ATCC

Query: 1 EGLGKLF 7
EGLG+LF
Sbjct: 108 EGLGELF 114


>sp|Y995_META3|UPF0288 protein Maeo_0995|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EGLGKLFSF 9
EG+GK+F +
Sbjct: 263 EGIGKVFVY 271


>sp|CAPPA_METS5|PHOSPHOENOLPYRUVATE carboxylase|Metallosphaera sedula (strain ATCC 51363

Query: 1 EGLGKLFSFG 10
EGL L S+G
Sbjct: 432 EGLSTLVSYG 441


>sp|PYRG_METMP|CTP synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EGLGKLFS 8
EGLGKL +
Sbjct: 252 EGLGKLVT 259


>sp|Y3543_METJA|UNCHARACTERIZED protein MJECL43|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGLGKL 6
EGLGKL
Sbjct: 209 EGLGKL 214


>sp|RRP4_KORCO|EXOSOME complex component Rrp4|Korarchaeum cryptofilum (strain OPF8)

Query: 1 EGLGKL 6
EGLGKL
Sbjct: 137 EGLGKL 142


>sp|PYRG_METJA|CTP synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGLGKLFS 8
EGLGKL +
Sbjct: 255 EGLGKLVT 262


>sp|NQOR_METMA|NAD(P)H dehydrogenase (quinone)|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EGLGKLFS 8
+GLGKL+S
Sbjct: 101 DGLGKLWS 108




44|Sequence|216|225|LFSFGGLGIW

>sp|SRP54_THEKO|SIGNAL recognition particle 54 kDa|Thermococcus kodakarensis (strain ATCC

Query: 2 FSFGGLGI 9
F+FGGLGI
Sbjct: 441 FNFGGLGI 448


>sp|SRP54_THEGJ|SIGNAL recognition particle 54 kDa|Thermococcus gammatolerans (strain DSM

Query: 2 FSFGGLGI 9
F+FGGLGI
Sbjct: 441 FNFGGLGI 448


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 FGGLGIW 10
FG +GIW
Sbjct: 223 FGAIGIW 229


>sp|AGMT_PYRHO|AGMATINASE horikoshii (strain ATCC 700860

Query: 5 GGLGIW 10
GGLG W
Sbjct: 229 GGLGFW 234


>sp|Y182_ARCFU|UNCHARACTERIZED protein AF_0182|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FSFGGLGIW 10
F F G G+W
Sbjct: 51 FDFSGGGMW 59


>sp|SRP54_METTP|SIGNAL recognition particle 54 kDa|Methanothrix thermoacetophila (strain

Query: 1 LFSFGGLGI 9
+ FGG+GI
Sbjct: 344 MLPFGGIGI 352


>sp|HEM3_PICTO|PROBABLE porphobilinogen deaminase|Picrophilus torridus (strain ATCC

Query: 1 LFSFGGLGIW 10
L+S GG G++
Sbjct: 48 LYSIGGTGVF 57


>sp|COBD_METTP|PROBABLE cobalamin biosynthesis protein CobD|Methanothrix thermoacetophila

Query: 1 LFSFGGLGI 9
LFS GLG+
Sbjct: 171 LFSCAGLGV 179


>sp|SYR_KORCO|ARGININE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LFSFGGLGI 9
L+ F GLG+
Sbjct: 387 LYKFDGLGV 395


>sp|GPMI_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LFSFGGL 7
LFS+GG+
Sbjct: 118 LFSYGGV 124


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LFSFGGLG 8
+ S+GGLG
Sbjct: 13 IVSYGGLG 20




45|Sequence|221|230|GLGIWTLIDV

>sp|DPHB_ARCFU|DIPHTHINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GLGIWTLIDV 10
GLG+W + D+
Sbjct: 6 GLGLWDVKDI 15


>sp|EF2_NANEQ|ELONGATION factor 2|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GLGIWTLID 9
G G+W L+D
Sbjct: 704 GRGVWYLVD 712


>sp|AGMT_PYRHO|AGMATINASE horikoshii (strain ATCC 700860

Query: 1 GLGIWTLID 9
GLG W +I+
Sbjct: 230 GLGFWEVIE 238


>sp|STOPP_PYRHO|MEMBRANE-BOUND protease PH1510|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LGIWTLI 8
LGIW LI
Sbjct: 246 LGIWALI 252


>sp|ACEB_HALVD|MALATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 2 LGIWTL 7
LGIW+L
Sbjct: 254 LGIWSL 259


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 2 LGIWTLI 8
LG+WT +
Sbjct: 269 LGVWTFV 275


>sp|RFRNP_IGNH4|RNA-FREE ribonuclease P|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LGIWTLI 8
LG+W L+
Sbjct: 74 LGVWILV 80


>sp|APGM_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GLGIWTLIDV 10
GLGI+ +DV
Sbjct: 247 GLGIYAGLDV 256


>sp|NFI_ARCFU|ENDONUCLEASE V|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GIWTLID 9
G+W L+D
Sbjct: 146 GLWRLLD 152




46|Sequence|226|235|TLIDVLLIGV

>sp|RL18E_ARCFU|LARGE ribosomal subunit protein eL18|Archaeoglobus fulgidus (strain

Query: 1 TLIDVLL 7
TLIDVLL
Sbjct: 10 TLIDVLL 16


>sp|COPB_ARCFU|COPPER-EXPORTING P-type ATPase B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TLIDVLLIG 9
TLID++L+G
Sbjct: 159 TLIDIMLLG 167


>sp|PANB_NATPD|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Natronomonas pharaonis (strain ATCC

Query: 3 IDVLLIG 9
+DVLL+G
Sbjct: 34 VDVLLVG 40


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 TLIDVLLIGV 10
T +D+LL+G+
Sbjct: 269 TSLDILLMGL 278


>sp|PANB_NITMS|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 IDVLLIG 9
IDVLL+G
Sbjct: 37 IDVLLVG 43




47|Sequence|231|240|LLIGVGYVGP

>sp|Y1054_METJA|UNCHARACTERIZED protein MJ1054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LIGVGYVG 9
+IG GYVG
Sbjct: 5 VIGTGYVG 12


>sp|WECC_METVS|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LIGVGYVG 9
+IG+GY+G
Sbjct: 14 VIGLGYIG 21


>sp|WECC_METMP|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LIGVGYVG 9
+IG+GY+G
Sbjct: 14 VIGLGYIG 21


>sp|WECC_METM7|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 2 LIGVGYVG 9
+IG+GY+G
Sbjct: 14 VIGLGYIG 21


>sp|WECC_METM5|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 2 LIGVGYVG 9
+IG+GY+G
Sbjct: 14 VIGLGYIG 21


>sp|WECC_METJA|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LIGVGYVG 9
+IG+GY+G
Sbjct: 15 VIGLGYIG 22


>sp|DLDH2_HALMA|DIHYDROLIPOYL dehydrogenase 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 LLIGVGYVG 9
L++G GY+G
Sbjct: 183 LVVGAGYIG 191


>sp|AGLM_HALVD|UDP-GLUCOSE 6-dehydrogenase AglM|Haloferax volcanii (strain ATCC 29605

Query: 2 LIGVGYVG 9
+IG GYVG
Sbjct: 5 IIGSGYVG 12


>sp|TRKA1_METMZ|TRK system potassium uptake protein|Methanosarcina mazei

Query: 1 LLIGVGYVG 9
LLIG G VG
Sbjct: 234 LLIGCGIVG 242


>sp|TRKA1_METMA|TRK system potassium uptake protein|Methanosarcina mazei (strain ATCC

Query: 1 LLIGVGYVG 9
LLIG G VG
Sbjct: 234 LLIGCGIVG 242


>sp|WECC_META3|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LIGVGYVG 9
++G+GY+G
Sbjct: 16 VVGLGYIG 23


>sp|AK_METJA|PROBABLE aspartokinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLIGVGYVG 9
+LIGV Y+G
Sbjct: 107 VLIGVAYLG 115


>sp|TRKA2_METMA|TRK system potassium uptake protein|Methanosarcina mazei (strain ATCC

Query: 1 LLIGVGYVG 9
LLIG G VG
Sbjct: 234 LLIGCGIVG 242


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 3 IGVGYVGP 10
+G+ Y GP
Sbjct: 142 VGISYAGP 149


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 IGVGYVGP 10
+G+ Y GP
Sbjct: 137 VGISYAGP 144


>sp|DLDH3_HALMA|DIHYDROLIPOYL dehydrogenase 3|Haloarcula marismortui (strain ATCC 43049

Query: 1 LLIGVGYVG 9
+++G GY+G
Sbjct: 183 VIVGAGYIG 191


>sp|TRM1_SACI7|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 LLIGVGYVGP 10
++IG Y+GP
Sbjct: 271 IIIGPLYIGP 280


>sp|TRM1_SACI6|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 LLIGVGYVGP 10
++IG Y+GP
Sbjct: 271 IIIGPLYIGP 280


>sp|TRM1_SACI4|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 LLIGVGYVGP 10
++IG Y+GP
Sbjct: 271 IIIGPLYIGP 280


>sp|TRM1_SACI3|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 LLIGVGYVGP 10
++IG Y+GP
Sbjct: 271 IIIGPLYIGP 280


>sp|TRM1_SACI2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 LLIGVGYVGP 10
++IG Y+GP
Sbjct: 271 IIIGPLYIGP 280


>sp|TRM1_SACI1|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 LLIGVGYVGP 10
++IG Y+GP
Sbjct: 271 IIIGPLYIGP 280


>sp|HEM1_METVS|GLUTAMYL-TRNA reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LLIGVGYVG 9
LLIG G +G
Sbjct: 160 LLIGAGEIG 168


>sp|HEM1_METMP|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LLIGVGYVG 9
LLIG G +G
Sbjct: 161 LLIGAGEIG 169


>sp|HEM1_METM7|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C7 /

Query: 1 LLIGVGYVG 9
LLIG G +G
Sbjct: 161 LLIGAGEIG 169


>sp|HEM1_NATPD|GLUTAMYL-TRNA reductase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 GVGYVGP 10
GVG VGP
Sbjct: 126 GVGGVGP 132


>sp|Y678_METJA|UNCHARACTERIZED protein MJ0678|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLIGVGYV 8
LLIG GYV
Sbjct: 247 LLIGAGYV 254


>sp|GLMS_PYRHO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus horikoshii (strain ATCC

Query: 5 VGYVGP 10
+GY+GP
Sbjct: 5 IGYIGP 10


>sp|DADD_METBF|5'-DEOXYADENOSINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LLIGVGYVGP 10
LL +G++GP
Sbjct: 233 LLEDIGFLGP 242


>sp|HTPX_PYRFU|PROTEASE HtpX homolog|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LLIGVGYV 8
LL+G+GY+
Sbjct: 19 LLVGIGYL 26


>sp|GLMS_PYRAB|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus abyssi (strain GE5 /

Query: 5 VGYVGP 10
+GY+GP
Sbjct: 5 IGYIGP 10


>sp|HTPX_PYRAB|PROTEASE HtpX homolog|Pyrococcus abyssi (strain GE5 /

Query: 1 LLIGVGYV 8
LL+G+GY+
Sbjct: 19 LLVGIGYL 26


>sp|RS4E_CALMQ|SMALL ribosomal subunit protein eS4|Caldivirga maquilingensis (strain

Query: 1 LLIGVGYV 8
L+IG GYV
Sbjct: 58 LIIGKGYV 65


>sp|IMDH_HALSA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 4 GVGYVG 9
G+GYVG
Sbjct: 451 GMGYVG 456


>sp|HTPX_THEGJ|PROTEASE HtpX homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LLIGVGYV 8
LL+G+GY+
Sbjct: 19 LLMGIGYL 26


>sp|PUR2_METBU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 GVGYVGP 10
G+G VGP
Sbjct: 89 GIGAVGP 95


>sp|WECC_PYRHO|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LIGVGYVG 9
++G+GY+G
Sbjct: 5 VLGLGYIG 12




48|Sequence|236|247|GYVGPADGSLYI

>sp|CAS1B_METHJ|PUTATIVE CRISPR-associated endonuclease Cas1 2|Methanospirillum hungatei

Query: 1 GYVGPADGSLY 11
GY+ P D SL+
Sbjct: 68 GYISPYDYSLF 78


>sp|ATGT_PYRAE|TRNA-GUANINE(15) transglycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 VGPADGSLYI 12
VGP G LY+
Sbjct: 157 VGPIQGGLYL 166


>sp|MRE11_HALSA|DNA double-strand break repair protein|Halobacterium salinarum (strain

Query: 3 VGPADGSLYI 12
+GP DG+ +I
Sbjct: 246 LGPTDGTAFI 255


>sp|RPIA_METMA|RIBOSE-5-PHOSPHATE isomerase A|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YVGPADGSLYI 12
Y+G DGS+ I
Sbjct: 219 YIGKKDGSVKI 229


>sp|Y1348_ARCFU|UNCHARACTERIZED protein AF_1348|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GYVGPADGSLYI 12
G+V DG LY+
Sbjct: 63 GFVVEKDGKLYL 74


>sp|CAS5_ARCFU|CRISPR-ASSOCIATED protein Cas5|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YVGPADGSLYI 12
Y+G +D LY+
Sbjct: 134 YLGSSDSMLYV 144


>sp|APE1_SULTO|PROBABLE aminopeptidase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YVGPADGSLYI 12
YV P DG+ I
Sbjct: 88 YVAPYDGNYLI 98


>sp|AATD_AERPE|A-TYPE ATP synthase subunit D|Aeropyrum pernix (strain ATCC 700893

Query: 1 GYVGPADGSLYI 12
+ PA+GSL +
Sbjct: 82 AFTAPAEGSLEV 93


>sp|ATGT_PICTO|TRNA-GUANINE(15) transglycosylase|Picrophilus torridus (strain ATCC 700027

Query: 4 GPADGSLY 11
GP GS+Y
Sbjct: 156 GPVQGSIY 163


>sp|PYRC_PYRFU|DIHYDROOROTASE furiosus (strain ATCC 43587

Query: 1 GYVGPADGSL 10
GY+G DG +
Sbjct: 18 GYIGIEDGKI 27


>sp|PDXS_THEVO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermoplasma volcanium (strain

Query: 1 GYVGPADGSLYI 12
G PADG+L +
Sbjct: 257 GVATPADGALMM 268


>sp|PDXS_THEAC|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermoplasma acidophilum (strain

Query: 1 GYVGPADGSLYI 12
G PADG+L +
Sbjct: 257 GVATPADGALMM 268


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 PADGSLY 11
PADGS++
Sbjct: 697 PADGSVH 703


>sp|Y057_METKA|UPF0215 protein MK0057|Methanopyrus kandleri (strain AV19 /

Query: 1 GYVGPAD 7
GY GP D
Sbjct: 18 GYYGPED 24


>sp|RS5_HALSA|SMALL ribosomal subunit protein uS5|Halobacterium salinarum (strain

Query: 1 GYVGPADG 8
GYVG A+G
Sbjct: 81 GYVGYAEG 88


>sp|ASD_ARCFU|PUTATIVE archaetidylserine decarboxylase proenzyme|Archaeoglobus fulgidus

Query: 1 GYVGPADGSL 10
G V PADG +
Sbjct: 52 GVVSPADGRI 61


>sp|TGT_ARCFU|PUTATIVE queuine tRNA-ribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 2 YVGPADG 8
YV PA+G
Sbjct: 308 YVSPAEG 314


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 YVGPADGSLYI 12
++G D S+Y+
Sbjct: 242 FIGAEDKSIYV 252


>sp|GLMS_PYRHO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus horikoshii (strain ATCC

Query: 1 GYVGPADGS 9
GY+GP S
Sbjct: 6 GYIGPRKAS 14


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GPADGSLYI 12
GP GS+Y+
Sbjct: 359 GPLSGSIYL 367


>sp|GSA_NATPD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GYVGPADGSLYI 12
G+V ADG+ YI
Sbjct: 42 GHVIDADGNRYI 53


>sp|CHED1_METMA|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina mazei (strain

Query: 5 PADGSLYI 12
PADGS+ +
Sbjct: 203 PADGSMIV 210


>sp|RPO7_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo7|Saccharolobus solfataricus (strain ATCC

Query: 3 VGPADGSLYI 12
+GP DG ++I
Sbjct: 101 LGPMDGLVHI 110


>sp|RRP42_THEVO|EXOSOME complex component Rrp42|Thermoplasma volcanium (strain ATCC 51530

Query: 2 YVGPADGSLYI 12
YV A+GS Y+
Sbjct: 44 YVPRANGSAYV 54


>sp|RPO7_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo7|Saccharolobus shibatae (strain ATCC

Query: 3 VGPADGSLYI 12
+GP DG ++I
Sbjct: 101 LGPMDGLVHI 110


>sp|GLMS_PYRAB|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus abyssi (strain GE5 /

Query: 1 GYVGPADGS 9
GY+GP S
Sbjct: 6 GYIGPRKAS 14


>sp|RL24E_PICTO|LARGE ribosomal subunit protein eL24|Picrophilus torridus (strain ATCC

Query: 3 VGPADGSLYI 12
+ PA G LY+
Sbjct: 13 IEPASGFLYV 22


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 6 ADGSLYI 12
ADG+LY+
Sbjct: 414 ADGTLYL 420


>sp|CISY_THEAC|CITRATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YVGPAD 7
YVGPA+
Sbjct: 370 YVGPAE 375


>sp|RPO7_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo7|Sulfolobus acidocaldarius (strain ATCC

Query: 3 VGPADGSLYI 12
+GP DG ++I
Sbjct: 101 MGPVDGLVHI 110






THE END