SR1IP_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|SDKNCGPVAM

>sp|PIMT_METJA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 KNCGPVA 9
K+CGPVA
Sbjct: 197 KDCGPVA 203


>sp|UPP_THEON|URACIL phosphoribosyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 DKNCGPVA 9
D+N GP+A
Sbjct: 28 DENTGPIA 35


>sp|THII_PYRAE|TRNA sulfurtransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 NCGPVA 9
+CGPVA
Sbjct: 235 DCGPVA 240


>sp|Y049_METTM|UNCHARACTERIZED protein MTBMA_c00490|Methanothermobacter marburgensis (strain

Query: 1 SDKNCGPVAM 10
S +CGP A+
Sbjct: 20 SGYSCGPAAL 29


>sp|COFC_METB6|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanoregula boonei (strain DSM 21154

Query: 2 DKNCGPV 8
D NC PV
Sbjct: 44 DANCSPV 50


>sp|PYRH_METBF|URIDYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 SDKNCGPVAM 10
SD NC P A+
Sbjct: 147 SDPNCDPSAV 156


>sp|PYRH_METAC|URIDYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SDKNCGPVAM 10
SD NC P A+
Sbjct: 147 SDPNCDPSAV 156


>sp|PYRH_METMA|URIDYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SDKNCGPVAM 10
SD NC P A+
Sbjct: 147 SDPNCDPCAV 156


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 KNCGPVAM 10
++CGPV++
Sbjct: 433 ESCGPVSV 440




2|SequenceR|15|6|CGARVSDKNC

>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 GARVSDKN 9
G+R+SDKN
Sbjct: 238 GSRISDKN 245


>sp|PUS10_THEAM|TRNA pseudouridine synthase Pus10|Thermosphaera aggregans (strain DSM

Query: 1 CGARVSDK 8
CG R+SD+
Sbjct: 106 CGGRISDE 113


>sp|RTCA_METMA|RNA 3'-terminal phosphate cyclase|Methanosarcina mazei (strain ATCC

Query: 1 CGARVS 6
CGARVS
Sbjct: 59 CGARVS 64


>sp|Y611_ARCFU|UNCHARACTERIZED protein AF_0611|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 RVSDKNC 10
RVS KNC
Sbjct: 102 RVSTKNC 108


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 CGARVSDKNC 10
CG V +NC
Sbjct: 158 CGKEVDPENC 167


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 CGARVSDK 8
CGA + DK
Sbjct: 77 CGASIGDK 84


>sp|KAD6_PYRHO|PUTATIVE adenylate kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 CGARVSDK 8
CG RV+D+
Sbjct: 40 CGRRVNDE 47


>sp|SAT_AERPE|SULFATE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 CGARVSDKNC 10
CG V++K C
Sbjct: 328 CGGMVNEKVC 337


>sp|DHYS_SULTO|PROBABLE deoxyhypusine synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GARVSDKN 9
G R+SD+N
Sbjct: 167 GKRISDEN 174


>sp|SAT_STAMF|SULFATE adenylyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 1 CGARVSDKNC 10
CG V++K C
Sbjct: 326 CGGMVNEKIC 335


>sp|SAT_PYRAB|SULFATE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 CGARVSDKNC 10
CG V++K C
Sbjct: 323 CGGMVNEKIC 332


>sp|SAT_IGNH4|SULFATE adenylyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 CGARVSDKNC 10
CG V++K C
Sbjct: 326 CGGMVNEKIC 335


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 1 CGARVSDK 8
CG R DK
Sbjct: 648 CGVRADDK 655


>sp|GFCR_ARCFU|TRANSCRIPTIONAL regulator GfcR|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ARVSDKNC 10
ARVS K C
Sbjct: 132 ARVSGKKC 139


>sp|Y1270_PYRAB|UPF0148 protein PYRAB12700|Pyrococcus abyssi (strain GE5 /

Query: 2 GARVSDKNC 10
GA++ DK+C
Sbjct: 18 GAKMLDKHC 26


>sp|SAT_HYPBU|SULFATE adenylyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 CGARVSDKNC 10
CG V++K C
Sbjct: 326 CGQMVNEKIC 335


>sp|Y795_PYRHO|UPF0148 protein PH0795|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GARVSDKNC 10
GA++ DK+C
Sbjct: 18 GAKMLDKHC 26


>sp|RPO10_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo10|Sulfolobus acidocaldarius (strain

Query: 1 CGARVSDK 8
CGA V+DK
Sbjct: 10 CGAVVADK 17




3|SequenceR|20|11|YGCKKCGARV

>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 YGCKKCGAR 9
Y CKKCG R
Sbjct: 19 YKCKKCGER 27


>sp|SYG_THEKO|GLYCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 CKKCGAR 9
CKKCGAR
Sbjct: 91 CKKCGAR 97


>sp|SYG_PYRFU|GLYCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CKKCGAR 9
CKKCGAR
Sbjct: 89 CKKCGAR 95


>sp|SYG_PYRAB|GLYCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 CKKCGAR 9
CKKCGAR
Sbjct: 91 CKKCGAR 97


>sp|SYG_THEGJ|GLYCINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 CKKCGAR 9
C+KCGAR
Sbjct: 91 CRKCGAR 97


>sp|SYG_THESM|GLYCINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 3 CKKCGAR 9
CKKCG+R
Sbjct: 91 CKKCGSR 97


>sp|YI48_METSM|INSERTION element ISM1 uncharacterized 48.3|Methanobrevibacter smithii

Query: 1 YGCKKCGAR 9
Y CKKCG +
Sbjct: 99 YQCKKCGKK 107


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YGCKKCGARV 10
Y CK CG RV
Sbjct: 420 YVCKDCGNRV 429


>sp|TRM1_SULAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfolobus acidocaldarius

Query: 1 YGCKKCGARV 10
Y C KCG R+
Sbjct: 244 YECPKCGYRI 253


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 3 CKKCGARV 10
C+KCG+R+
Sbjct: 1065 CRKCGSRL 1072


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 3 CKKCGARV 10
C+KCG+R+
Sbjct: 1065 CRKCGSRL 1072


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 3 CKKCGARV 10
C+KCG+R+
Sbjct: 1065 CRKCGSRL 1072


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 3 CKKCGARV 10
C+KCG+R+
Sbjct: 1065 CRKCGSRL 1072


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 3 CKKCGARV 10
C+KCG+R+
Sbjct: 1065 CRKCGSRL 1072


>sp|TIAS_METV3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanococcus voltae (strain

Query: 1 YGCKKCGARV 10
Y C KCG R+
Sbjct: 455 YKCNKCGKRL 464


>sp|SYG_PYRHO|GLYCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 CKKCGAR 9
CKKCG R
Sbjct: 91 CKKCGMR 97


>sp|TIAS_METAC|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina acetivorans

Query: 1 YGCKKCGAR 9
+ CKKCG R
Sbjct: 374 FRCKKCGTR 382


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 3 CKKCGARV 10
C KCG RV
Sbjct: 1080 CPKCGGRV 1087


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YGCKKCGARV 10
+ C+KCGA++
Sbjct: 423 WTCEKCGAKL 432


>sp|TFE_THEPD|TRANSCRIPTION factor E|Thermofilum pendens (strain DSM 2475

Query: 1 YGCKKCGAR 9
Y C KCG R
Sbjct: 113 YVCPKCGTR 121


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 3 CKKCGARV 10
C++CG RV
Sbjct: 1133 CRECGGRV 1140


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 3 CKKCGARV 10
C++CG RV
Sbjct: 2224 CRECGGRV 2231


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 3 CKKCGARV 10
C++CG RV
Sbjct: 1305 CRECGGRV 1312


Query: 1 YGCKKCGA 8
Y C+ CGA
Sbjct: 700 YECRDCGA 707


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 3 CKKCGARV 10
C++CG RV
Sbjct: 1330 CRECGGRV 1337


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus (strain

Query: 1 YGCKKCGAR 9
Y C KCG R
Sbjct: 389 YKCPKCGYR 397


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 1 YGCKKCGAR 9
Y C KCG R
Sbjct: 242 YECSKCGYR 250


>sp|TIAS_THEPD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermofilum pendens (strain DSM

Query: 1 YGCKKCGAR 9
Y C KCG R
Sbjct: 382 YKCPKCGYR 390


Query: 3 CKKCGARV 10
C KCG+R+
Sbjct: 366 CPKCGSRM 373


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YGCKKCGARV 10
Y C+ CG R+
Sbjct: 420 YVCRNCGYRI 429


>sp|SAT_STAMF|SULFATE adenylyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 3 CKKCGARV 10
CKKCG V
Sbjct: 323 CKKCGGMV 330


>sp|SAT_PYRAB|SULFATE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 CKKCGARV 10
CKKCG V
Sbjct: 320 CKKCGGMV 327


>sp|SAT_IGNH4|SULFATE adenylyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 CKKCGARV 10
CKKCG V
Sbjct: 323 CKKCGGMV 330


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii

Query: 3 CKKCGARV 10
CK CG R+
Sbjct: 62 CKTCGGRI 69


>sp|TIAS_THEGJ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus gammatolerans

Query: 3 CKKCGARV 10
CK+CG R+
Sbjct: 372 CKRCGYRM 379


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGCKKCGA 8
Y C KCGA
Sbjct: 207 YYCPKCGA 214


>sp|RF1_ARCFU|PEPTIDE chain release factor subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 YGCKKCGARV 10
Y C KCG V
Sbjct: 322 YRCPKCGKEV 331


>sp|SAT_AERPE|SULFATE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YGCKKCGARV 10
Y C++CG V
Sbjct: 323 YYCRRCGGMV 332


>sp|Y683_METJA|UNCHARACTERIZED protein MJ0683|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGCKKCGAR 9
Y CK C AR
Sbjct: 36 YACKYCYAR 44


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 CKKCGA 8
CKKCG+
Sbjct: 21 CKKCGS 26


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 3 CKKCGAR 9
C KCG+R
Sbjct: 738 CPKCGSR 744


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 3 CKKCGAR 9
C KCG+R
Sbjct: 635 CPKCGSR 641


>sp|TIAS_THESM|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus sibiricus (strain

Query: 3 CKKCGARV 10
CKKCG ++
Sbjct: 373 CKKCGYKM 380


>sp|CPGS_THESM|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus sibiricus (strain

Query: 2 GCKKCGA 8
GC++CG
Sbjct: 204 GCRRCGG 210


>sp|CPGS_THEON|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus onnurineus (strain

Query: 2 GCKKCGA 8
GC++CG
Sbjct: 204 GCRRCGG 210


>sp|CPGS_THEKO|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus kodakarensis (strain

Query: 2 GCKKCGA 8
GC++CG
Sbjct: 204 GCRRCGG 210


>sp|CPGS_THEGJ|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus gammatolerans

Query: 2 GCKKCGA 8
GC++CG
Sbjct: 205 GCRRCGG 211


>sp|CPGS_PYRHO|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus horikoshii (strain

Query: 2 GCKKCGA 8
GC++CG
Sbjct: 207 GCRRCGG 213


>sp|CPGS_PYRFU|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus furiosus (strain ATCC

Query: 2 GCKKCGA 8
GC++CG
Sbjct: 203 GCRRCGG 209


>sp|CPGS_PYRAB|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus abyssi (strain GE5 /

Query: 2 GCKKCGA 8
GC++CG
Sbjct: 203 GCRRCGG 209


>sp|CPGS_METTH|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermobacter

Query: 2 GCKKCGA 8
GC++CG
Sbjct: 224 GCRRCGG 230


>sp|CPGS_METS3|CYCLIC 2,3-diphosphoglycerate synthetase|Methanobrevibacter smithii

Query: 2 GCKKCGA 8
GC++CG
Sbjct: 221 GCRRCGG 227


>sp|CPGS_METFV|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermus fervidus (strain

Query: 2 GCKKCGA 8
GC++CG
Sbjct: 222 GCRRCGG 228


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 3 CKKCGAR 9
C KCGA+
Sbjct: 1037 CTKCGAK 1043


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YGCKKCG 7
+ CKKCG
Sbjct: 467 WKCKKCG 473


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YGCKKCG 7
+ CKKCG
Sbjct: 467 WKCKKCG 473


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YGCKKCG 7
+ CKKCG
Sbjct: 467 WKCKKCG 473


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain DSM

Query: 3 CKKCGARV 10
C KCG R+
Sbjct: 1044 CPKCGGRL 1051


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 1 YGCKKCG 7
YGC CG
Sbjct: 664 YGCPDCG 670


Query: 3 CKKCGAR 9
C KCG R
Sbjct: 1052 CVKCGER 1058


>sp|SAT_THEON|SULFATE adenylyltransferase|Thermococcus onnurineus (strain NA1)

Query: 3 CKKCGARV 10
C+KCG V
Sbjct: 320 CRKCGGMV 327


>sp|TFE_METLZ|TRANSCRIPTION factor E|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 YGCKKCG 7
Y CK CG
Sbjct: 157 YQCKNCG 163


>sp|TIAS_ACIS3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Acidilobus saccharovorans

Query: 1 YGCKKCGAR 9
Y C +CG R
Sbjct: 374 YRCPRCGLR 382


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YGCKKCG 7
+ CKKCG
Sbjct: 406 WHCKKCG 412


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 3 CKKCG 7
CKKCG
Sbjct: 90 CKKCG 94


Query: 3 CKKCG 7
C+KCG
Sbjct: 74 CEKCG 78


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CKKCG 7
CKKCG
Sbjct: 408 CKKCG 412


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 CKKCG 7
CKKCG
Sbjct: 408 CKKCG 412


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CKKCG 7
CKKCG
Sbjct: 20 CKKCG 24


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 CKKCG 7
CKKCG
Sbjct: 37 CKKCG 41


>sp|ACDG_METJA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanocaldococcus

Query: 3 CKKCG 7
CKKCG
Sbjct: 19 CKKCG 23


>sp|RL37A_DESA1|LARGE ribosomal subunit protein eL43|Desulfurococcus amylolyticus

Query: 1 YGCKKCGAR 9
+ CKKCGA+
Sbjct: 55 WACKKCGAK 63


>sp|RPO3_METKA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanopyrus kandleri (strain AV19 /

Query: 2 GCKKCGAR 9
GC+KC R
Sbjct: 93 GCEKCQVR 100


>sp|TIAS_IGNAA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignisphaera aggregans (strain

Query: 1 YGCKKCGARV 10
Y C KCG V
Sbjct: 393 YKCDKCGYSV 402


>sp|Y1489_METJA|MCM-LIKE protein MJ1489|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGCKKCGARV 10
Y C KCG V
Sbjct: 149 YICPKCGREV 158


>sp|RL37A_META3|LARGE ribosomal subunit protein eL43|Methanococcus aeolicus (strain

Query: 1 YGCKKCGARV 10
+ CKKCGA++
Sbjct: 57 WECKKCGAKM 66


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YGCKKCG 7
Y C KCG
Sbjct: 128 YRCSKCG 134


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YGCKKCG 7
Y C KCG
Sbjct: 128 YRCSKCG 134


>sp|IF2B_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 3 CKKCGAR 9
CK CGA+
Sbjct: 124 CKACGAQ 130


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 3 CKKCGAR 9
CK CG R
Sbjct: 62 CKTCGQR 68


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 3 CKKCGAR 9
CK CG R
Sbjct: 62 CKTCGQR 68


>sp|RF1_HALMA|PEPTIDE chain release factor subunit|Haloarcula marismortui (strain ATCC

Query: 3 CKKCGARV 10
C +CGA V
Sbjct: 356 CSRCGATV 363


>sp|IF2G_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 1 YGCKKCGA 8
Y C +CG+
Sbjct: 72 YSCNQCGS 79


>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 3 CKKCGAR 9
CKKCG +
Sbjct: 333 CKKCGYK 339


>sp|TIAS_METMA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina mazei (strain

Query: 1 YGCKKCG 7
+ CKKCG
Sbjct: 374 FRCKKCG 380


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 CKKCGARV 10
C KCG ++
Sbjct: 1621 CPKCGGKI 1628


Query: 1 YGCKKCGA 8
+ C KCGA
Sbjct: 738 WHCPKCGA 745


>sp|PORB_METTM|PYRUVATE synthase subunit PorB|Methanothermobacter marburgensis (strain

Query: 2 GCKKCGARV 10
GC CGA V
Sbjct: 15 GCAGCGATV 23


>sp|PORB_METTH|PYRUVATE synthase subunit PorB|Methanothermobacter thermautotrophicus

Query: 2 GCKKCGARV 10
GC CGA V
Sbjct: 15 GCAGCGATV 23


>sp|TIAS_THEVO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermoplasma volcanium (strain

Query: 1 YGCKKCGAR 9
+ C KCG R
Sbjct: 382 FRCPKCGRR 390


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 CKKCGA 8
CK CGA
Sbjct: 21 CKSCGA 26


>sp|SAT_HYPBU|SULFATE adenylyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 3 CKKCGARV 10
C+KCG V
Sbjct: 323 CRKCGQMV 330


>sp|KU_ARCFU|NON-HOMOLOGOUS end joining protein Ku|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CKKCGARV 10
C+KCG V
Sbjct: 48 CEKCGKEV 55


>sp|KAD_PYRHO|ADENYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 CKKCGA 8
C KCGA
Sbjct: 128 CSKCGA 133


>sp|GUAAA_METM5|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 3 CKKCG 7
CKKCG
Sbjct: 180 CKKCG 184


>sp|IF2B_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 CKKCGAR 9
CK CGA+
Sbjct: 124 CKACGAQ 130


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter thermautotrophicus

Query: 1 YGCKKCGARV 10
Y C CG R+
Sbjct: 327 YECASCGHRM 336


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YGCKKCGA 8
+ C KCGA
Sbjct: 727 WTCPKCGA 734


Query: 1 YGCKKCGARV 10
Y C KC ++
Sbjct: 746 YSCPKCNVKL 755


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter

Query: 3 CKKCGAR 9
C+ CGA+
Sbjct: 60 CRSCGAK 66


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YGCKKCGARV 10
+GC CG +
Sbjct: 8 FGCPNCGGPI 17


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGCKKCGAR 9
Y C KCG +
Sbjct: 435 YVCDKCGNK 443


>sp|KAD_PYRAB|ADENYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 CKKCGA 8
C KCGA
Sbjct: 128 CSKCGA 133


>sp|GLPA1_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A1|Haloferax volcanii

Query: 2 GCKKCG 7
GC++CG
Sbjct: 106 GCRECG 111


>sp|NPD2_ARCFU|NAD-DEPENDENT protein deacylase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CKKCGA 8
C+KCG+
Sbjct: 150 CRKCGS 155


>sp|GUAAA_METM7|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 3 CKKCG 7
CKKCG
Sbjct: 180 CKKCG 184


>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 3 CKKCGARV 10
CK+CG ++
Sbjct: 372 CKRCGYKM 379


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 CKKCGAR 9
CK CG R
Sbjct: 174 CKVCGTR 180


>sp|TFE_AERPE|TRANSCRIPTION factor E|Aeropyrum pernix (strain ATCC 700893

Query: 1 YGCKKCGAR 9
Y C +CG++
Sbjct: 128 YTCPRCGSK 136


>sp|GUAAA_METM6|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 3 CKKCG 7
CKKCG
Sbjct: 180 CKKCG 184


>sp|GUAAA_METMP|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 3 CKKCG 7
CKKCG
Sbjct: 180 CKKCG 184


>sp|HYPA_METKA|HYDROGENASE maturation factor HypA|Methanopyrus kandleri (strain AV19 /

Query: 3 CKKCGAR 9
C KCG+R
Sbjct: 109 CPKCGSR 115


>sp|Y394_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 3 CKKCGARV 10
CKK G R+
Sbjct: 423 CKKSGVRI 430


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CKKCGARV 10
C KCGA++
Sbjct: 680 CPKCGAKL 687


>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YGCKKCGA 8
Y C CGA
Sbjct: 197 YKCPHCGA 204


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 3 CKKCGAR 9
C KCGA+
Sbjct: 1060 CIKCGAK 1066


Query: 2 GCKKCGARV 10
C KCG V
Sbjct: 1075 ACPKCGGNV 1083


>sp|RPO2C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanococcus vannielii (strain ATCC

Query: 1 YGCKKCG 7
Y C KCG
Sbjct: 545 YVCAKCG 551


>sp|TFE_HALMA|TRANSCRIPTION factor E|Haloarcula marismortui (strain ATCC 43049

Query: 1 YGCKKCGAR 9
Y C+ CG R
Sbjct: 117 YLCEHCGIR 125


>sp|Y675_METJA|UNCHARACTERIZED protein MJ0675|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGCKKCG 7
Y C KCG
Sbjct: 350 YKCLKCG 356


>sp|TF2B6_HALSA|TRANSCRIPTION initiation factor IIB 6|Halobacterium salinarum (strain ATCC

Query: 2 GCKKCGARV 10
GC +CG V
Sbjct: 24 GCPECGGLV 32


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 YGCKKCGAR 9
+ C++CG R
Sbjct: 463 WQCEQCGER 471


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 YGCKKCGA 8
+ C+KCG+
Sbjct: 517 WKCEKCGS 524


>sp|IF2B_PICTO|TRANSLATION initiation factor 2 subunit|Picrophilus torridus (strain ATCC

Query: 3 CKKCGAR 9
CK CGA+
Sbjct: 124 CKACGAQ 130


>sp|KAD_PYRFU|ADENYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CKKCGA 8
C KCGA
Sbjct: 128 CPKCGA 133


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 CKKCGA 8
C+KCG+
Sbjct: 1013 CQKCGS 1018


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 3 CKKCGARV 10
C KCGA +
Sbjct: 683 CPKCGANL 690


Query: 3 CKKCGARV 10
C KCG V
Sbjct: 1076 CNKCGGPV 1083


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 CKKCGAR 9
CK CG R
Sbjct: 176 CKVCGTR 182


>sp|RS26_SACS2|SMALL ribosomal subunit protein eS26|Saccharolobus solfataricus (strain

Query: 2 GCKKCGARV 10
C +CGARV
Sbjct: 22 SCDQCGARV 30


>sp|MTRD_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 2 GCKKCGARV 10
GC C A+V
Sbjct: 98 GCPPCSAKV 106


>sp|IF2G_META3|TRANSLATION initiation factor 2 subunit|Methanococcus aeolicus (strain ATCC

Query: 3 CKKCGA 8
C KCGA
Sbjct: 58 CPKCGA 63


>sp|TRM1_METBF|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina barkeri

Query: 3 CKKCGAR 9
C KCG R
Sbjct: 251 CPKCGFR 257


>sp|RL40_IGNH4|LARGE ribosomal subunit protein eL40|Ignicoccus hospitalis (strain

Query: 1 YGCKKCGA 8
Y C+KCGA
Sbjct: 20 YVCRKCGA 27


>sp|TIAS_METLZ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocorpusculum labreanum

Query: 1 YGCKKCGARV 10
Y C++C +V
Sbjct: 370 YKCRECSGKV 379


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 CKKCG 7
CK+CG
Sbjct: 409 CKRCG 413


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 3 CKKCG 7
C+KCG
Sbjct: 100 CRKCG 104


>sp|HYPA_IGNH4|HYDROGENASE maturation factor HypA|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 CKKCG 7
CK+CG
Sbjct: 75 CKRCG 79


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 GCKKCGARV 10
C KCG V
Sbjct: 1074 ACPKCGGNV 1082


>sp|TFE_METS5|TRANSCRIPTION factor E|Metallosphaera sedula (strain ATCC 51363

Query: 1 YGCKKCGARV 10
+ C KCG ++
Sbjct: 135 FKCPKCGVQL 144


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GCKKCGARV 10
C KCG V
Sbjct: 1081 ACPKCGGNV 1089


>sp|RL37A_SULTO|LARGE ribosomal subunit protein eL43|Sulfurisphaera tokodaii (strain

Query: 3 CKKCGAR 9
CKKCGA+
Sbjct: 55 CKKCGAK 61


>sp|TFE_SACS2|TRANSCRIPTION factor E|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YGCKKCGARV 10
+ C KCG+++
Sbjct: 134 FKCLKCGSQL 143


>sp|TFE_SACI7|TRANSCRIPTION factor E|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 YGCKKCGARV 10
+ C KCG+++
Sbjct: 134 FKCLKCGSQL 143


>sp|TFE_SACI6|TRANSCRIPTION factor E|Saccharolobus islandicus (strain M.16.4 /

Query: 1 YGCKKCGARV 10
+ C KCG+++
Sbjct: 134 FKCLKCGSQL 143


>sp|TFE_SACI4|TRANSCRIPTION factor E|Saccharolobus islandicus (strain M.14.25 /

Query: 1 YGCKKCGARV 10
+ C KCG+++
Sbjct: 134 FKCLKCGSQL 143


>sp|TFE_SACI3|TRANSCRIPTION factor E|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 YGCKKCGARV 10
+ C KCG+++
Sbjct: 134 FKCLKCGSQL 143


>sp|TFE_SACI2|TRANSCRIPTION factor E|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 YGCKKCGARV 10
+ C KCG+++
Sbjct: 134 FKCLKCGSQL 143


>sp|TFE_SACI1|TRANSCRIPTION factor E|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 YGCKKCGARV 10
+ C KCG+++
Sbjct: 134 FKCLKCGSQL 143


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 YGCKKCG 7
Y C+ CG
Sbjct: 16 YECRSCG 22


>sp|RL37A_PYRAB|LARGE ribosomal subunit protein eL43|Pyrococcus abyssi (strain GE5 /

Query: 1 YGCKKCGA 8
+ CKKCGA
Sbjct: 54 WQCKKCGA 61


>sp|PORB_METJA|PYRUVATE synthase subunit PorB|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GCKKCGARV 10
GC CGA +
Sbjct: 18 GCAGCGAAI 26


>sp|KAD_THESM|ADENYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 3 CKKCGA 8
C++CGA
Sbjct: 128 CRQCGA 133


>sp|RL37A_METMP|LARGE ribosomal subunit protein eL43|Methanococcus maripaludis (strain

Query: 3 CKKCGARV 10
C+KCGA++
Sbjct: 59 CEKCGAKI 66


>sp|PUS10_METTP|TRNA pseudouridine synthase Pus10|Methanothrix thermoacetophila (strain

Query: 2 GCKKCG 7
GC++CG
Sbjct: 228 GCERCG 233


>sp|KAD_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 3 CKKCGA 8
C KCGA
Sbjct: 128 CPKCGA 133


>sp|TFS_METJA|TRANSCRIPTION factor S|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGCKKCG 7
Y CKKCG
Sbjct: 95 YKCKKCG 101


>sp|RL37A_METM5|LARGE ribosomal subunit protein eL43|Methanococcus maripaludis (strain

Query: 3 CKKCGARV 10
C+KCGA++
Sbjct: 59 CEKCGAKI 66


>sp|Y579_METJA|UNCHARACTERIZED protein MJ0579|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GCKKCG 7
GCK CG
Sbjct: 102 GCKACG 107


>sp|TFE_SULTO|TRANSCRIPTION factor E|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YGCKKCGA 8
+ C KCG+
Sbjct: 135 FKCPKCGS 142


>sp|NPD2_PYRAE|NAD-DEPENDENT protein deacylase 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 CKKCGA 8
C+KCG
Sbjct: 142 CRKCGG 147


>sp|TFS_METTL|TRANSCRIPTION factor S|Methanothermococcus thermolithotrophicus

Query: 1 YGCKKCG 7
Y CKKCG
Sbjct: 92 YKCKKCG 98


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 CKKCGA 8
C+ CGA
Sbjct: 470 CRSCGA 475


>sp|GCST_PYRHO|PROBABLE aminomethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YGCKKCG 7
YG K CG
Sbjct: 238 YGIKPCG 244


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 CKKCGARV 10
C KCG +
Sbjct: 1179 CPKCGGNI 1186


>sp|Y021_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 2 GCKKC 6
GCK+C
Sbjct: 20 GCKQC 24


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 CKKCG 7
C+KCG
Sbjct: 15 CQKCG 19


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CKKCG 7
C+KCG
Sbjct: 21 CQKCG 25


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 CKKCG 7
C+KCG
Sbjct: 21 CQKCG 25


>sp|FAEHP_METJA|BIFUNCTIONAL enzyme Fae/Hps|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CKKCG 7
C+KCG
Sbjct: 260 CQKCG 264


>sp|TRM1_METAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina acetivorans

Query: 3 CKKCGAR 9
C KCG R
Sbjct: 251 CPKCGFR 257


>sp|RTCA_METMA|RNA 3'-terminal phosphate cyclase|Methanosarcina mazei (strain ATCC

Query: 4 KKCGARV 10
K CGARV
Sbjct: 57 KICGARV 63


>sp|TIAS_HALWD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Haloquadratum walsbyi (strain

Query: 1 YGCKKCG 7
Y C+ CG
Sbjct: 409 YRCRDCG 415


>sp|RF1_PYRHO|PEPTIDE chain release factor subunit|Pyrococcus horikoshii (strain ATCC

Query: 3 CKKCGAR 9
C KCG++
Sbjct: 359 CPKCGSQ 365


>sp|RF1_PYRFU|PEPTIDE chain release factor subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CKKCGAR 9
C KCG++
Sbjct: 359 CPKCGSQ 365


>sp|RF1_PYRAB|PEPTIDE chain release factor subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 CKKCGAR 9
C KCG++
Sbjct: 356 CPKCGSQ 362


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 YG--CKKCG 7
YG C+KCG
Sbjct: 152 YGDQCEKCG 160


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 CKKCGA 8
C+KCG
Sbjct: 506 CEKCGG 511


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 CKKCGA 8
CK CG+
Sbjct: 21 CKSCGS 26


>sp|RF1_THEKO|PEPTIDE chain release factor subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 CKKCGAR 9
C KCG++
Sbjct: 356 CPKCGSQ 362


>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain

Query: 3 CKKCGA 8
CK CG+
Sbjct: 74 CKSCGS 79


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CKKCGARV 10
C+KCG +
Sbjct: 476 CEKCGKYI 483


>sp|RF1_THEON|PEPTIDE chain release factor subunit|Thermococcus onnurineus (strain NA1)

Query: 3 CKKCGAR 9
C KCG++
Sbjct: 356 CPKCGSQ 362


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 CKKCG 7
CK+CG
Sbjct: 438 CKECG 442


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 CKKCG 7
C+KCG
Sbjct: 155 CEKCG 159


>sp|SYK_THEVO|LYSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 CKKCG 7
C+KCG
Sbjct: 165 CEKCG 169


>sp|SYK_THEAC|LYSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 CKKCG 7
C+KCG
Sbjct: 168 CEKCG 172


>sp|SYK_METTH|LYSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 CKKCG 7
C+KCG
Sbjct: 191 CEKCG 195


>sp|SYK_METMP|LYSINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 CKKCG 7
C+KCG
Sbjct: 171 CEKCG 175


>sp|SYK_METMI|LYSINE--TRNA ligase|Methanococcus maripaludis (Methanococcus deltae)

Query: 3 CKKCG 7
C+KCG
Sbjct: 171 CEKCG 175


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CKKCG 7
C+KCG
Sbjct: 463 CEKCG 467


>sp|PUS10_METV3|TRNA pseudouridine synthase Pus10|Methanococcus voltae (strain ATCC

Query: 2 GCKKC 6
GC+KC
Sbjct: 293 GCEKC 297


>sp|FAU1_THEPD|PROBABLE ribonuclease FAU-1|Thermofilum pendens (strain DSM 2475

Query: 2 GCKKC 6
GC+KC
Sbjct: 288 GCEKC 292


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 YGCKKCGARV 10
Y C KC ++
Sbjct: 745 YTCPKCNVKL 754


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 YGCKKCGARV 10
Y C KC ++
Sbjct: 748 YTCPKCNVKL 757


>sp|Y441_NANEQ|PROTEIN NEQ441|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 YGCKKCG 7
YGC K G
Sbjct: 150 YGCLKAG 156


>sp|Y3513_METJA|MCM-LIKE protein MJECL13|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGCKKCG 7
Y C KCG
Sbjct: 137 YICPKCG 143


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGCKKCGARV 10
+ C KCG +
Sbjct: 648 WKCPKCGGSI 657


>sp|Y748_METKA|UPF0212 protein MK0748|Methanopyrus kandleri (strain AV19 /

Query: 1 YGCKKCGARV 10
Y C +CG +
Sbjct: 55 YECPECGNEI 64


>sp|CREN7_IGNH4|CHROMATIN protein Cren7|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 CKKCGARV 10
C KCGA V
Sbjct: 4 CPKCGAEV 11


>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 CKKCGAR 9
CK CG++
Sbjct: 184 CKVCGSK 190


>sp|RS14Z_SULAC|SMALL ribosomal subunit protein uS14|Sulfolobus acidocaldarius (strain

Query: 3 CKKCGAR 9
CK+CG+R
Sbjct: 19 CKRCGSR 25


>sp|KAD_METAR|ADENYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 3 CKKCGA 8
C+ CGA
Sbjct: 130 CRSCGA 135


>sp|TFE_METHJ|TRANSCRIPTION factor E|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 YGCKKCG 7
Y C CG
Sbjct: 119 YNCPNCG 125


>sp|ISF_METTE|IRON-SULFUR flavoprotein|Methanosarcina thermophila

Query: 3 CKKCGA 8
CK CGA
Sbjct: 47 CKACGA 52


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 3 CKKCGARV 10
C KCG+ +
Sbjct: 1071 CPKCGSNL 1078


>sp|RL37A_NANEQ|LARGE ribosomal subunit protein eL43|Nanoarchaeum equitans (strain

Query: 1 YGCKKCG 7
Y CKKCG
Sbjct: 56 YRCKKCG 62


>sp|RL37A_METVS|LARGE ribosomal subunit protein eL43|Methanococcus vannielii (strain

Query: 3 CKKCGARV 10
C KCGA++
Sbjct: 59 CDKCGAKI 66


>sp|TRM1_METS5|TRNA (guanine(26)-N(2))-dimethyltransferase|Metallosphaera sedula

Query: 1 YGCKKCG 7
Y C +CG
Sbjct: 242 YECDRCG 248


>sp|RL37A_METM7|LARGE ribosomal subunit protein eL43|Methanococcus maripaludis (strain

Query: 3 CKKCGARV 10
C KCGA++
Sbjct: 59 CDKCGAKI 66


>sp|RL37A_METM6|LARGE ribosomal subunit protein eL43|Methanococcus maripaludis (strain

Query: 3 CKKCGARV 10
C KCGA++
Sbjct: 59 CDKCGAKI 66


>sp|Y1230_METJA|UNCHARACTERIZED protein MJ1230|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CKKCG 7
CKKCG
Sbjct: 47 CKKCG 51


>sp|RL37A_METS3|LARGE ribosomal subunit protein eL43|Methanobrevibacter smithii (strain

Query: 1 YGCKKCGA 8
+ C+KCGA
Sbjct: 54 WKCRKCGA 61


>sp|TF2B_IGNH4|TRANSCRIPTION initiation factor IIB|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 YGCKKCGARV 10
Y C +CG V
Sbjct: 28 YVCARCGTIV 37


>sp|RL40_PYRAR|LARGE ribosomal subunit protein eL40|Pyrobaculum arsenaticum (strain

Query: 3 CKKCGAR 9
C++CGAR
Sbjct: 23 CRECGAR 29


>sp|Y433_ARCFU|PROBABLE S-adenosyl-L-methionine-binding protein AF_0433|Archaeoglobus

Query: 3 CKKCG 7
C+KCG
Sbjct: 323 CEKCG 327


>sp|NCSA_HALVD|TRNA 2-thiolation protein NcsA|Haloferax volcanii (strain ATCC 29605

Query: 3 CKKCGAR 9
C++CG++
Sbjct: 297 CERCGSK 303


>sp|RL40_PYRNV|LARGE ribosomal subunit protein eL40|Pyrobaculum neutrophilum (strain

Query: 3 CKKCGAR 9
C++CGAR
Sbjct: 23 CRECGAR 29


>sp|RL40_PYRIL|LARGE ribosomal subunit protein eL40|Pyrobaculum islandicum (strain DSM

Query: 3 CKKCGAR 9
C++CGAR
Sbjct: 23 CRECGAR 29


>sp|KPTA_METKA|PROBABLE RNA 2'-phosphotransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 YGCKKCGAR 9
+ C++CG R
Sbjct: 17 HTCERCGRR 25


>sp|RUBY_METJA|PUTATIVE rubrerythrin|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CKKCG 7
C+KCG
Sbjct: 171 CRKCG 175


>sp|PUS10_KORCO|TRNA pseudouridine synthase Pus10|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GCKKCG 7
GC+ CG
Sbjct: 156 GCEACG 161


>sp|HYPA_THEON|HYDROGENASE maturation factor HypA|Thermococcus onnurineus (strain NA1)

Query: 2 GCKKCGAR 9
C KCG+R
Sbjct: 109 ACPKCGSR 116


>sp|KPTA2_ARCFU|PROBABLE RNA 2'-phosphotransferase 2|Archaeoglobus fulgidus (strain ATCC

Query: 3 CKKCG 7
CK+CG
Sbjct: 6 CKRCG 10


>sp|CAS5A_SACS2|CRISPR system aCascade subunit Cas5|Saccharolobus solfataricus (strain

Query: 2 GCKKCGARV 10
GCK+C A V
Sbjct: 144 GCKECLASV 152


>sp|QUEC_METB6|7-CYANO-7-DEAZAGUANINE synthase|Methanoregula boonei (strain DSM 21154

Query: 3 CKKCGA 8
C KCGA
Sbjct: 191 CGKCGA 196


>sp|RL37A_METTH|LARGE ribosomal subunit protein eL43|Methanothermobacter

Query: 1 YGCKKCGA 8
+ C+KCGA
Sbjct: 54 WKCRKCGA 61




4|SequenceR|25|16|TLHGPYGCKK

>sp|CFBD_METTH|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanothermobacter

Query: 2 LHGPYGC 8
LHGP+GC
Sbjct: 25 LHGPHGC 31


>sp|CFBD_METJA|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanocaldococcus

Query: 2 LHGPYGC 8
LHGP GC
Sbjct: 27 LHGPSGC 33


>sp|CFBD_METAC|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina acetivorans

Query: 2 LHGPYGC 8
LHGP GC
Sbjct: 33 LHGPPGC 39


>sp|NIFE_METBA|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanosarcina

Query: 2 LHGPYGC 8
+HGP GC
Sbjct: 65 VHGPIGC 71


>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 2 LHGPYGC 8
+HGP GC
Sbjct: 86 VHGPVGC 92


>sp|RFCL_STAMF|REPLICATION factor C large subunit|Staphylothermus marinus (strain ATCC 43588

Query: 2 LHGPYGCKK 10
L+GP GC K
Sbjct: 48 LYGPAGCGK 56


>sp|NIFE_METMI|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 2 LHGPYGC 8
+HGP GC
Sbjct: 93 VHGPIGC 99


>sp|CFBD_METBF|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina barkeri

Query: 2 LHGPYGC 8
+HGP GC
Sbjct: 33 MHGPPGC 39


>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 2 LHGPYGC 8
+HGP GC
Sbjct: 93 VHGPIGC 99


>sp|NIFE_METTH|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 2 LHGPYGC 8
+HGP GC
Sbjct: 83 VHGPVGC 89


>sp|DADD_METVS|5'-DEOXYADENOSINE deaminase|Methanococcus vannielii (strain ATCC 35089

Query: 3 HGPYGCKK 10
H PY C K
Sbjct: 178 HAPYTCSK 185


>sp|DADD_METST|5'-DEOXYADENOSINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 HGPYGCKK 10
H PY C K
Sbjct: 183 HAPYTCSK 190


>sp|DADD_METMP|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain DSM 14266

Query: 3 HGPYGCKK 10
H PY C K
Sbjct: 178 HAPYTCSK 185


>sp|DADD_METM7|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C7 /

Query: 3 HGPYGCKK 10
H PY C K
Sbjct: 178 HAPYTCSK 185


>sp|DADD_METM6|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C6 /

Query: 3 HGPYGCKK 10
H PY C K
Sbjct: 178 HAPYTCSK 185


>sp|DADD_METM5|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C5 /

Query: 3 HGPYGCKK 10
H PY C K
Sbjct: 178 HAPYTCSK 185


>sp|DADD_METJA|5'-DEOXYADENOSINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HGPYGCKK 10
H PY C K
Sbjct: 176 HAPYTCSK 183


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 2 LHGPYGCKK 10
L+GP GC K
Sbjct: 178 LYGPPGCGK 186


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LHGPYGCKK 10
L+GP GC K
Sbjct: 177 LYGPPGCGK 185


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 LHGPYGCKK 10
L+GP GC K
Sbjct: 177 LYGPPGCGK 185


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LHGPYGCKK 10
L+GP GC K
Sbjct: 179 LYGPPGCGK 187


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LHGPYGCKK 10
L+GP GC K
Sbjct: 176 LYGPPGCGK 184


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 2 LHGPYGCKK 10
L+GP GC K
Sbjct: 176 LYGPPGCGK 184


>sp|NIFD_METBA|NITROGENASE molybdenum-iron protein alpha chain|Methanosarcina barkeri

Query: 2 LHGPYGC 8
+HGP GC
Sbjct: 82 VHGPIGC 88


>sp|PYRC_METJA|DIHYDROOROTASE jannaschii (strain ATCC 43067

Query: 1 TLHGPYGCK 9
TL+ YGCK
Sbjct: 414 TLYEAYGCK 422


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 TLHGPY 6
+LHGPY
Sbjct: 764 SLHGPY 769


>sp|Y412_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 TLHGPYGCKK 10
T+ GP GC K
Sbjct: 50 TVMGPSGCGK 59


>sp|NIFD_METTL|NITROGENASE molybdenum-iron protein alpha chain|Methanothermococcus

Query: 2 LHGPYGC 8
+HGP GC
Sbjct: 66 VHGPIGC 72


>sp|TYW2_METJA|TRNA(PHE) (4-demethylwyosine(37)-C(7))

Query: 1 TLHGPYGC 8
T+H YGC
Sbjct: 61 TIHKEYGC 68


>sp|PSTB_METKA|PHOSPHATE import ATP-binding protein PstB|Methanopyrus kandleri (strain

Query: 1 TLHGPYGCKK 10
T+ GP GC K
Sbjct: 33 TIIGPSGCGK 42


>sp|PSTB_THEKO|PHOSPHATE import ATP-binding protein PstB|Thermococcus kodakarensis (strain

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 35 LMGPSGCGK 43


>sp|PSTB_PYRAB|PHOSPHATE import ATP-binding protein PstB|Pyrococcus abyssi (strain GE5 /

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 36 LMGPSGCGK 44


>sp|ACDE_METBU|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanococcoides

Query: 2 LHGPYGCK 9
+H YGCK
Sbjct: 10 IHCTYGCK 17


>sp|Y870_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 42 LTGPTGCGK 50


>sp|Y1996_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 42 LTGPTGCGK 50


>sp|Y3016_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 43 LAGPSGCGK 51


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 43 LAGPSGCGK 51


>sp|RFCL_METBU|REPLICATION factor C large subunit|Methanococcoides burtonii (strain DSM 6242

Query: 2 LHGPYGCKK 10
LHGP G K
Sbjct: 48 LHGPAGVGK 56


>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 LHGPYGCKK 10
LHGP G K
Sbjct: 48 LHGPAGVGK 56


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LHGPYGCKK 10
++GP GC K
Sbjct: 142 VYGPPGCGK 150


>sp|KPTA_THEAC|PROBABLE RNA 2'-phosphotransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 TLHGPY 6
T HGPY
Sbjct: 6 TCHGPY 11


>sp|HEM1_METTM|GLUTAMYL-TRNA reductase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 TLHGPYGCKK 10
++HG CKK
Sbjct: 154 SIHGDLKCKK 163


>sp|MALK_THELN|TREHALOSE/MALTOSE import ATP-binding protein MalK|Thermococcus litoralis (strain

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 34 LLGPSGCGK 42


>sp|RNJ_METJA|RIBONUCLEASE J|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LHGPYG 7
LH PYG
Sbjct: 161 LHTPYG 166


>sp|DADD_METKA|5'-DEOXYADENOSINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 3 HGPYGCKK 10
H PY C +
Sbjct: 185 HAPYTCSE 192


>sp|XACK_HALVD|XYLOSE/ARABINOSE import ATP-binding protein XacK|Haloferax volcanii (strain ATCC

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 39 LVGPSGCGK 47


>sp|XACJ_HALVD|XYLOSE/ARABINOSE import ATP-binding protein XacJ|Haloferax volcanii (strain ATCC

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 34 LVGPSGCGK 42


>sp|GVPN_HALMT|GAS vesicle ATPase GvpN|Haloferax mediterranei (strain ATCC 33500

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 89 LIGPTGCGK 97


>sp|GVPN2_HALSA|GAS vesicle ATPase GvpN2|Halobacterium salinarum (strain ATCC 700922

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 87 LIGPTGCGK 95


>sp|GVPN1_HALSA|GAS vesicle ATPase GvpN1|Halobacterium salinarum (strain ATCC 700922

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 89 LIGPTGCGK 97


>sp|PSTB_METTH|PHOSPHATE import ATP-binding protein PstB|Methanothermobacter

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 37 LIGPSGCGK 45


>sp|PSTB_METST|PHOSPHATE import ATP-binding protein PstB|Methanosphaera stadtmanae (strain

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 36 LIGPSGCGK 44


>sp|PSTB_METMP|PHOSPHATE import ATP-binding protein PstB|Methanococcus maripaludis (strain

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 35 LIGPSGCGK 43


>sp|PSTB_METMA|PHOSPHATE import ATP-binding protein PstB|Methanosarcina mazei (strain ATCC

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 43 LIGPSGCGK 51


>sp|PSTB_METJA|PHOSPHATE import ATP-binding protein PstB|Methanocaldococcus jannaschii

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 36 LIGPSGCGK 44


>sp|PSTB_METBU|PHOSPHATE import ATP-binding protein PstB|Methanococcoides burtonii (strain

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 40 LIGPSGCGK 48


>sp|PSTB_METBF|PHOSPHATE import ATP-binding protein PstB|Methanosarcina barkeri (strain

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 43 LIGPSGCGK 51


>sp|PSTB_METAC|PHOSPHATE import ATP-binding protein PstB|Methanosarcina acetivorans

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 43 LIGPSGCGK 51


>sp|PSTB_HALWD|PHOSPHATE import ATP-binding protein PstB|Haloquadratum walsbyi (strain DSM

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 78 LIGPSGCGK 86


>sp|PSTB3_NATPD|PHOSPHATE import ATP-binding protein PstB|Natronomonas pharaonis (strain

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 61 LIGPSGCGK 69


>sp|PSTB2_HALSA|PHOSPHATE import ATP-binding protein PstB|Halobacterium salinarum (strain

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 116 LIGPSGCGK 124


>sp|PSTB2_HALMA|PHOSPHATE import ATP-binding protein PstB|Haloarcula marismortui (strain

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 84 LIGPSGCGK 92


>sp|PSTB1_NATPD|PHOSPHATE import ATP-binding protein PstB|Natronomonas pharaonis (strain

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 68 LIGPSGCGK 76


>sp|DTDA_PICTO|D-AMINOACYL-TRNA deacylase|Picrophilus torridus (strain ATCC 700027

Query: 1 TLHGPY 6
T HGPY
Sbjct: 127 THHGPY 132


>sp|DADD_METTH|5'-DEOXYADENOSINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 HGPYGCKK 10
H PY C +
Sbjct: 183 HSPYTCSE 190


>sp|WTPB_THEKO|MOLYBDATE/TUNGSTATE transport system permease protein|Thermococcus kodakarensis

Query: 1 TLHGPY 6
TLH PY
Sbjct: 42 TLHDPY 47


>sp|PSTB_METHJ|PHOSPHATE import ATP-binding protein PstB|Methanospirillum hungatei JF-1

Query: 2 LHGPYGCKK 10
L GP GC K
Sbjct: 37 LIGPSGCGK 45


>sp|Y1397_METJA|UNCHARACTERIZED protein MJ1397|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TLHGPYGCK 9
T++ P GCK
Sbjct: 408 TVYVPEGCK 416


>sp|NIFD_METTH|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 2 LHGPYGC 8
+H P GC
Sbjct: 68 IHSPVGC 74


>sp|NIFD_METTM|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 2 LHGPYGC 8
+H P GC
Sbjct: 68 IHSPVGC 74


>sp|DTDA_CENSY|D-AMINOACYL-TRNA deacylase|Cenarchaeum symbiosum (strain A)

Query: 1 TLHGPYGCKK 10
T HGP G K
Sbjct: 127 THHGPTGLDK 136




5|SequenceR|30|21|NRCEFTLHGP

>sp|HEM2_ARCFU|DELTA-AMINOLEVULINIC acid dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CEFTLHG 9
CE+T HG
Sbjct: 122 CEYTTHG 128


>sp|PUR2_METVS|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus vannielii (strain ATCC 35089

Query: 4 EFTLHG 9
EFTLHG
Sbjct: 200 EFTLHG 205


>sp|PUR2_METMP|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 EFTLHG 9
EFTLHG
Sbjct: 200 EFTLHG 205


>sp|PUR2_METM7|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C7 /

Query: 4 EFTLHG 9
EFTLHG
Sbjct: 200 EFTLHG 205


>sp|PUR2_METM6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C6 /

Query: 4 EFTLHG 9
EFTLHG
Sbjct: 200 EFTLHG 205


>sp|PUR2_METM5|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C5 /

Query: 4 EFTLHG 9
EFTLHG
Sbjct: 200 EFTLHG 205


>sp|PUR2_METJA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EFTLHG 9
EFTLHG
Sbjct: 200 EFTLHG 205


>sp|HEM2_METJA|DELTA-AMINOLEVULINIC acid dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CEFTLHG 9
CE+T HG
Sbjct: 131 CEYTSHG 137


>sp|GFCR_ARCFU|TRANSCRIPTIONAL regulator GfcR|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CEFTLHGP 10
CEFT++ P
Sbjct: 105 CEFTIYYP 112


>sp|SOR_PYRFU|SUPEROXIDE reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RCEFTLHG 9
R EFT HG
Sbjct: 69 RVEFTAHG 76


>sp|RTCA_METTH|RNA 3'-terminal phosphate cyclase|Methanothermobacter

Query: 3 CEFTLHG 9
CE TLH
Sbjct: 301 CELTLHA 307


>sp|SYY_THESM|TYROSINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 4 EFTLHGP 10
EFT+H P
Sbjct: 304 EFTIHRP 310


>sp|SYY_THEON|TYROSINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 4 EFTLHGP 10
EFT+H P
Sbjct: 304 EFTIHRP 310


>sp|SYY_THEKO|TYROSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 EFTLHGP 10
EFT+H P
Sbjct: 304 EFTIHRP 310


>sp|SYY_THEGJ|TYROSINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 EFTLHGP 10
EFT+H P
Sbjct: 304 EFTIHRP 310


>sp|SYY_PYRFU|TYROSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 EFTLHGP 10
EFT+H P
Sbjct: 304 EFTIHRP 310


>sp|SYY_PYRAB|TYROSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 EFTLHGP 10
EFT+H P
Sbjct: 304 EFTIHRP 310


>sp|SYY_PYRHO|TYROSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 EFTLHGP 10
EFT+H P
Sbjct: 304 EFTVHRP 310


>sp|HEM2_METTH|DELTA-AMINOLEVULINIC acid dehydratase|Methanothermobacter thermautotrophicus (strain

Query: 3 CEFTLHG 9
C++T HG
Sbjct: 127 CQYTSHG 133


>sp|HEM2_METSC|DELTA-AMINOLEVULINIC acid dehydratase|Methanothermus sociabilis

Query: 3 CEFTLHG 9
C++T HG
Sbjct: 121 CQYTEHG 127


>sp|Y3004_HALS3|UPF0179 protein OE_3004R|Halobacterium salinarum (strain ATCC 29341

Query: 4 EFTLHGP 10
EF HGP
Sbjct: 16 EFVYHGP 22


>sp|Y1401_HALSA|UPF0179 protein VNG_1401C|Halobacterium salinarum (strain ATCC 700922

Query: 4 EFTLHGP 10
EF HGP
Sbjct: 16 EFVYHGP 22




6|SequenceR|35|26|DVRLFNRCEF

>sp|DNLI_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 LFNRCE 9
LFNRCE
Sbjct: 153 LFNRCE 158


>sp|ARLY_META3|ARGININOSUCCINATE lyase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 LFNRCEF 10
LF+ CEF
Sbjct: 263 LFSSCEF 269


>sp|Y038_METJA|UNCHARACTERIZED protein MJ0038|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VRLFNRC 8
VR FN C
Sbjct: 121 VRFFNEC 127




7|SequenceR|40|31|IDRKPDVRLF

>sp|AMZA_SACI7|ARCHAEMETZINCIN islandicus (strain Y.G.57.14 /

Query: 2 DRKPDVRLF 10
+RKPD+ LF
Sbjct: 113 NRKPDLELF 121


>sp|AMZA_SACI6|ARCHAEMETZINCIN islandicus (strain M.16.4 /

Query: 2 DRKPDVRLF 10
+RKPD+ LF
Sbjct: 113 NRKPDLELF 121


>sp|AMZA_SACI4|ARCHAEMETZINCIN islandicus (strain M.14.25 /

Query: 2 DRKPDVRLF 10
+RKPD+ LF
Sbjct: 113 NRKPDLELF 121


>sp|AMZA_SACI3|ARCHAEMETZINCIN islandicus (strain M.16.27) (Sulfolobus

Query: 2 DRKPDVRLF 10
+RKPD+ LF
Sbjct: 113 NRKPDLELF 121


>sp|AMZA_SACI2|ARCHAEMETZINCIN islandicus (strain L.S.2.15 /

Query: 2 DRKPDVRLF 10
+RKPD+ LF
Sbjct: 113 NRKPDLELF 121


>sp|AMZA_SACI1|ARCHAEMETZINCIN islandicus (strain Y.N.15.51 /

Query: 2 DRKPDVRLF 10
+RKPD+ LF
Sbjct: 113 NRKPDLELF 121


>sp|AMZA_SACS2|ARCHAEMETZINCIN solfataricus (strain ATCC 35092

Query: 2 DRKPDVRLF 10
+RKPD+ LF
Sbjct: 113 NRKPDLDLF 121


>sp|Y1593_PYRAB|PROTEIN PYRAB15930|Pyrococcus abyssi (strain GE5 /

Query: 1 IDRKPDV 7
+DRKPDV
Sbjct: 57 LDRKPDV 63


>sp|YPV8_METTF|UNCHARACTERIZED protein ORF8|Methanothermobacter thermautotrophicus

Query: 1 IDRKPDVRL 9
I R PDVRL
Sbjct: 88 ISRHPDVRL 96


>sp|AMPPA_METHJ|AMP phosphorylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 IDRKPDVR 8
IDR P+VR
Sbjct: 498 IDRVPNVR 505


>sp|SURE_METAR|5'-NUCLEOTIDASE SurE|Methanocella arvoryzae (strain DSM 22066

Query: 2 DRKPDV 7
DRKPD+
Sbjct: 86 DRKPDL 91


>sp|TRPB2_ARCFU|TRYPTOPHAN synthase beta chain 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IDRKPDV 7
+D KPDV
Sbjct: 255 VDEKPDV 261


>sp|PYRG_PYRAB|CTP synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 DRKPDVR 8
DR+PD+R
Sbjct: 267 DREPDLR 273


>sp|PYRG_PYRHO|CTP synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DRKPDVR 8
DR+PD+R
Sbjct: 267 DREPDLR 273


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RKPDVRLF 10
+KPD RLF
Sbjct: 451 QKPDGRLF 458


>sp|Y2099_SACI3|PROTEIN M1627_2099|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 IDRKPDV 7
IDRKP V
Sbjct: 60 IDRKPKV 66


>sp|Y772_SACI1|PROTEIN YN1551_0772|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 IDRKPDV 7
IDRKP V
Sbjct: 60 IDRKPKV 66


>sp|Y2186_SACI2|PROTEIN LS215_2186|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IDRKPDV 7
IDRKP V
Sbjct: 60 IDRKPKV 66


>sp|Y2147_SACI7|PROTEIN YG5714_2147|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IDRKPDV 7
IDRKP V
Sbjct: 60 IDRKPKV 66


>sp|Y2028_SACI6|PROTEIN M164_2028|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IDRKPDV 7
IDRKP V
Sbjct: 60 IDRKPKV 66


>sp|Y2021_SACI4|PROTEIN M1425_2021|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IDRKPDV 7
IDRKP V
Sbjct: 60 IDRKPKV 66


>sp|APGM_PICTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Picrophilus torridus (strain ATCC 700027

Query: 2 DRKPDVR 8
DR+PD++
Sbjct: 303 DRRPDIK 309


>sp|DPOL1_METTH|DNA polymerase PolB subunit 1|Methanothermobacter thermautotrophicus

Query: 1 IDRKPDV 7
ID+KPD+
Sbjct: 235 IDKKPDI 241


>sp|Y476_PYRFU|PROTEIN PF0476|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IDRKPDV 7
++RKPDV
Sbjct: 57 LNRKPDV 63


>sp|XACJ_HALVD|XYLOSE/ARABINOSE import ATP-binding protein XacJ|Haloferax volcanii (strain ATCC

Query: 1 IDRKPD 6
+DRKPD
Sbjct: 128 LDRKPD 133


>sp|CBIH_METTH|PROBABLE cobalt-factor III C(17)-methyltransferase|Methanothermobacter

Query: 1 IDRKPDVRL 9
+D PDVR+
Sbjct: 190 VDGAPDVRI 198




8|SequenceR|45|36|SVDLVIDRKP

>sp|Y1067_METMP|UNCHARACTERIZED iron-sulfur protein MMP1067|Methanococcus maripaludis (strain DSM

Query: 3 DLVIDRKP 10
DLV+DR+P
Sbjct: 87 DLVVDREP 94


>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 3 DLVIDRKP 10
DL++DR+P
Sbjct: 89 DLIVDREP 96


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 1 SVDLVIDRKP 10
+V VID+KP
Sbjct: 807 NVQFVIDKKP 816


>sp|MUTS2_PYRFU|DNA-BINDING protein MutS2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SVDLVIDRKP 10
+++L++DR+P
Sbjct: 515 NLNLIVDRQP 524


>sp|PMDHS_PYRFU|PHOSPHOMEVALONATE dehydratase small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DLVIDRKP 10
+LV+ RKP
Sbjct: 16 ELVVSRKP 23


>sp|DPOL1_METTH|DNA polymerase PolB subunit 1|Methanothermobacter thermautotrophicus

Query: 2 VDLVIDRKP 10
++VID+KP
Sbjct: 231 AEIVIDKKP 239




9|SequenceR|50|41|ESSTSSVDLV

***** No hits found ******


10|SequenceR|55|46|EEDSDESSTS

***** No hits found ******


11|SequenceR|60|51|NLEENEEDSD

>sp|HIS8_METS3|HISTIDINOL-PHOSPHATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 NLEENEEDSD 10
NLEEN+ D+D
Sbjct: 138 NLEENKLDTD 147


>sp|HTPX1_SULAC|PROTEASE HtpX homolog 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LEENEEDSD 10
L+ENE D++
Sbjct: 261 LKENERDAE 269




12|SequenceR|65|56|LAQLKNLEEN

>sp|PUR2_METKA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 QLKNLEE 9
QLKNL+E
Sbjct: 165 QLKNLDE 171


>sp|Y129_METJA|UNCHARACTERIZED protein MJ0129|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LAQLKNLEEN 10
+ QLK LE N
Sbjct: 161 IKQLKKLENN 170


>sp|Y409_METJA|UNCHARACTERIZED protein MJ0409|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AQLKNLEEN 10
+QLKN+E N
Sbjct: 403 SQLKNIEFN 411


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LAQLKNLEEN 10
L KNL+EN
Sbjct: 374 LTAFKNLDEN 383




13|SequenceR|70|61|IRKEQLAQLK

>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 IRKEQLAQLK 10
+RKE+L +LK
Sbjct: 489 VRKEELKRLK 498


>sp|PSB_METST|PROTEASOME subunit beta|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 KEQLAQLK 10
KE++AQ+K
Sbjct: 195 KEEIAQIK 202


>sp|GGR_THEVO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IRKEQLAQL 9
+ KE+LAQL
Sbjct: 344 VAKEKLAQL 352




14|SequenceR|75|66|EEEENIRKEQ

>sp|AROC_PYRAR|CHORISMATE synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 EENIRKE 9
EE+IRKE
Sbjct: 36 EEDIRKE 42


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEEENIRKEQ 10
++E NI+KE+
Sbjct: 150 KKETNIKKEE 159


>sp|THSB_SULAC|CHAPERONIN subunit beta|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EEEENIRKEQ 10
+EEENI KE+
Sbjct: 277 DEEENILKEK 286


>sp|THSB_SACSH|CHAPERONIN subunit beta|Saccharolobus shibatae (strain ATCC 51178

Query: 1 EEEENIRKEQ 10
EEEENI KE+
Sbjct: 276 EEEENILKEK 285


>sp|THSB_SACS2|CHAPERONIN subunit beta|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EEEENIRKEQ 10
EEEENI KE+
Sbjct: 276 EEEENILKEK 285


>sp|MTHK_METTH|CALCIUM-GATED potassium channel MthK|Methanothermobacter thermautotrophicus

Query: 2 EEENIRKE 9
E+EN+RK+
Sbjct: 144 EDENVRKK 151




15|SequenceR|80|71|KEKKKEEEEN

>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KEKKKEEE 8
KEKKK+E+
Sbjct: 7 KEKKKDEK 14




16|SequenceR|85|76|IKEKSKEKKK

***** No hits found ******


17|SequenceR|90|81|KKKLKIKEKS

>sp|Y2341_ARCFU|UNCHARACTERIZED protein AF_2341|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KKLKIKEKS 10
KKLKI+EK+
Sbjct: 51 KKLKIQEKT 59




18|SequenceR|95|86|YSRKRKKKLK

>sp|NEP1_THEKO|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus kodakarensis

Query: 1 YSRKRKKK 8
Y+R+RKK+
Sbjct: 27 YARRRKKR 34




19|SequenceR|100|91|TSSSSYSRKR

***** No hits found ******


20|SequenceR|105|96|STDEETSSSS

***** No hits found ******


21|SequenceR|110|101|QKKQKSTDEE

>sp|MOAE_HALVD|PROBABLE molybdopterin synthase|Haloferax volcanii (strain ATCC 29605

Query: 2 KKQKSTDEE 10
KK+ +TDEE
Sbjct: 247 KKETTTDEE 255




22|SequenceR|115|106|KKQYKQKKQK

***** No hits found ******


23|SequenceR|120|111|EKKKEKKQYK

***** No hits found ******


24|SequenceR|125|116|SKSKKEKKKE

***** No hits found ******


25|SequenceR|130|121|HKGKKSKSKK

>sp|OFOB2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 1 HKGKKSKS 8
H+G+K+KS
Sbjct: 133 HRGEKTKS 140


>sp|SYP_CENSY|PROLINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 HKGKKSK 7
H GKKSK
Sbjct: 367 HDGKKSK 373




26|SequenceR|135|126|KEKKHHKGKK

>sp|MTIP_METTH|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanothermobacter

Query: 1 KEKKHHKG 8
KE++HH G
Sbjct: 272 KEEQHHDG 279


>sp|NADE_AERPE|NH(3)-DEPENDENT NAD(+) synthetase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KEKKHHKGKK 10
K K H GKK
Sbjct: 277 KHYKQHAGKK 286


>sp|FTHS_THEAC|FORMATE--TETRAHYDROFOLATE ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 KHHKGKK 10
KHH G K
Sbjct: 321 KHHGGSK 327




27|SequenceR|140|131|KKRKKKEKKH

***** No hits found ******


28|SequenceR|145|136|SSHKEKKRKK

>sp|DHYS_METJA|PROBABLE deoxyhypusine synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 HKEKKRKK 10
H E+KRKK
Sbjct: 51 HIEEKRKK 58




29|SequenceR|155|141|KRSFESSNPTSSHKE

>sp|TRPB1_SULTO|TRYPTOPHAN synthase beta chain 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 FESSNPTSSHK 14
FE + PT SHK
Sbjct: 97 FEGATPTGSHK 107


>sp|SAHH_PYRAE|ADENOSYLHOMOCYSTEINASE aerophilum (strain ATCC 51768

Query: 1 KRSFESSNPTSSH 13
+R FE P S H
Sbjct: 33 RRRFEKEKPLSGH 45


>sp|TRPB1_SACS2|TRYPTOPHAN synthase beta chain 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 FESSNPTSSHK 14
+E + PT SHK
Sbjct: 98 YEGATPTGSHK 108


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KRSFESSNPTSS 12
+R F++++PT S
Sbjct: 138 RREFKTTDPTYS 149


>sp|AROD_ARCFU|3-DEHYDROQUINATE dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KRSFESSNP 9
KR+F+S NP
Sbjct: 65 KRAFDSLNP 73


>sp|DTDA_STAMF|D-AMINOACYL-TRNA deacylase|Staphylothermus marinus (strain ATCC 43588

Query: 2 RSFESSNPTSSHK 14
R+ +NP SHK
Sbjct: 106 RTLSIANPIVSHK 118


>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 KRSFESSNP 9
KR++E SNP
Sbjct: 351 KRTYELSNP 359


>sp|TRPB2_AERPE|TRYPTOPHAN synthase beta chain 2|Aeropyrum pernix (strain ATCC 700893

Query: 4 FESSNPTSSHK 14
+E PT SHK
Sbjct: 106 YEGVTPTGSHK 116


>sp|TRPB_PICTO|TRYPTOPHAN synthase beta chain|Picrophilus torridus (strain ATCC 700027

Query: 4 FESSNPTSSHK 14
FE + T SHK
Sbjct: 103 FEGATATGSHK 113


>sp|IF2G_METMA|TRANSLATION initiation factor 2 subunit|Methanosarcina mazei (strain ATCC

Query: 3 SFESSNPTSSHK 14
+ E+ PT SHK
Sbjct: 214 ALETQIPTPSHK 225


>sp|Y1610_METJA|UNCHARACTERIZED glycosyl hydrolase MJ1610|Methanocaldococcus jannaschii (strain

Query: 1 KRSFESSNPTSSHKE 15
K SF+ P HKE
Sbjct: 571 KYSFDGLFPEQIHKE 585


>sp|TRPB2_METTH|TRYPTOPHAN synthase beta chain 2|Methanothermobacter thermautotrophicus

Query: 5 ESSNPTSSHK 14
E +PT SHK
Sbjct: 101 EDYSPTGSHK 110




30|SequenceR|155|146|KRSFESSNPT

>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 KRSFESSNP 9
KR++E SNP
Sbjct: 351 KRTYELSNP 359


>sp|AROD_ARCFU|3-DEHYDROQUINATE dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KRSFESSNP 9
KR+F+S NP
Sbjct: 65 KRAFDSLNP 73


>sp|WTPA_ARCFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KRSFESSNP 9
KR+FE +P
Sbjct: 51 KRAFEEKHP 59


>sp|ARLY_METLZ|ARGININOSUCCINATE lyase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KRSFESSNP 9
K+SF S NP
Sbjct: 440 KQSFGSPNP 448


>sp|RS8E_METKA|SMALL ribosomal subunit protein eS8|Methanopyrus kandleri (strain AV19

Query: 1 KRSFESSNP 9
KR FE NP
Sbjct: 23 KRKFEMGNP 31




THE END