SHMOS_HUMAN Blast Output
Viruses
1|Sequence|1|10|MPPCLTTWLS

>sp|O1_FOWPN|PROTEIN O1 homolog|Fowlpox virus (strain NVSL) (FPV)

Query: 1 MPPCLTTWLS 10
+ PCL W+S
Sbjct: 243 ISPCLNKWIS 252


>sp|MIR2_HHV8P|E3 ubiquitin-protein ligase MIR2|Human herpesvirus 8 type P

Query: 2 PPCLTTWLS 10
P CL+TWL+
Sbjct: 41 PQCLSTWLT 49


>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P

Query: 4 CLTTWLS 10
CL+TWL+
Sbjct: 37 CLSTWLT 43


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 4 CLTTWLS 10
CL TW+S
Sbjct: 283 CLITWIS 289


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 4 CLTTWLS 10
CL TW+S
Sbjct: 283 CLITWIS 289


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 2 PPCLTTW 8
PP +TTW
Sbjct: 339 PPDITTW 345


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 4 CLTTWLS 10
CL TW+S
Sbjct: 283 CLITWIS 289


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 2 PPCLTTW 8
PP +TTW
Sbjct: 339 PPDITTW 345


>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)

Query: 3 PCLTTWL 9
P LTTW+
Sbjct: 374 PTLTTWI 380


>sp|TUBE1_BPK32|TAIL tubular protein A|Klebsiella phage KP32 (Bacteriophage KP32)

Query: 1 MPPCLTTWL 9
MP C W+
Sbjct: 126 MPECFRQWI 134


>sp|MCAPS_PLRV1|READTHROUGH protein P3-RTD|Potato leafroll virus (strain Potato/Scotland/strain

Query: 2 PPCLTTWL 9
PP T WL
Sbjct: 687 PPAATQWL 694


>sp|RLIG2_BPT4|RNA ligase 2|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 MPPCLTTWL 9
+ PC +WL
Sbjct: 208 LKPCYPSWL 216


>sp|NCAP_BCNVU|NUCLEOPROTEIN Canyon mammarenavirus (isolate Mouse/United

Query: 1 MPPCLTTWL 9
+ P LTTW+
Sbjct: 372 LSPNLTTWI 380


>sp|VBET_LAMBD|RECOMBINATION protein bet|Escherichia phage lambda (Bacteriophage lambda)

Query: 2 PPCLTTWL 9
P C+T W+
Sbjct: 116 PICVTEWM 123


>sp|POLG_PSBMV|GENOME polyprotein|Pea seed-borne mosaic virus (strain

Query: 4 CLTTWLS 10
C++ WLS
Sbjct: 456 CISNWLS 462


>sp|MVP_PSBMV|P3N-PIPO polyprotein|Pea seed-borne mosaic virus (strain

Query: 4 CLTTWLS 10
C++ WLS
Sbjct: 456 CISNWLS 462


>sp|LEF2_NPVLD|LATE expression factor 2|Lymantria dispar multicapsid nuclear

Query: 1 MPPCLTTWL 9
+PPC+T L
Sbjct: 115 LPPCMTGLL 123


>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)

Query: 3 PCLTTWL 9
PC+ TW+
Sbjct: 141 PCMKTWM 147


>sp|POLS_CRPVC|STRUCTURAL polyprotein|Cricket paralysis virus (isolate

Query: 2 PPCLTTW 8
PPCL T+
Sbjct: 847 PPCLLTF 853


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 3 PCLTTWL 9
PC T+WL
Sbjct: 1975 PCATSWL 1981


>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)

Query: 3 PCLTTWL 9
PC+ TW+
Sbjct: 151 PCMKTWI 157


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 3 PCLTTWL 9
PC T+WL
Sbjct: 1976 PCATSWL 1982


>sp|VIE1_BHV4D|PROBABLE E3 ubiquitin-protein ligase IE1|Bovine herpesvirus 4 (strain

Query: 4 CLTTWLS 10
CL TW+S
Sbjct: 160 CLKTWIS 166


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 2 PPCLTTWLS 10
PP L TW S
Sbjct: 2297 PPVLETWKS 2305




2|Sequence|6|15|TTWLSQLLKD

>sp|PRIM_ASFP4|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate

Query: 2 TWLSQLLKD 10
TWL+ LLKD
Sbjct: 568 TWLNNLLKD 576


>sp|PRIM_ASFWA|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate

Query: 2 TWLSQLLKD 10
TWL+ LLKD
Sbjct: 568 TWLNNLLKD 576


>sp|PRIM_ASFB7|PUTATIVE helicase/primase complex protein|African swine fever virus (strain

Query: 2 TWLSQLLKD 10
TWL+ LLKD
Sbjct: 568 TWLNNLLKD 576


>sp|X_HBVH2|PROTEIN X|Hepatitis B virus genotype H

Query: 1 TTWLSQLLKD 10
TTW+ + +KD
Sbjct: 105 TTWIEEYIKD 114


>sp|X_HBVH3|PROTEIN X|Hepatitis B virus genotype H

Query: 1 TTWLSQLLKD 10
TTW+ + +KD
Sbjct: 105 TTWIEEYIKD 114


>sp|X_HBVH1|PROTEIN X|Hepatitis B virus genotype H

Query: 1 TTWLSQLLKD 10
TTW+ + +KD
Sbjct: 105 TTWIEEYIKD 114


>sp|PRIM_ASFK5|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate

Query: 3 WLSQLLKD 10
WL+ LLKD
Sbjct: 558 WLNNLLKD 565


>sp|YSV_BPP2|UNCHARACTERIZED 30.4 kDa protein in|Escherichia phage P2 (Bacteriophage P2)

Query: 1 TTWLSQLLKD 10
+ WLSQ +KD
Sbjct: 205 SEWLSQEIKD 214


>sp|PRIM_ASFM2|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate

Query: 3 WLSQLLKD 10
WL+ LLKD
Sbjct: 563 WLNNLLKD 570


>sp|X_HBVF4|PROTEIN X|Hepatitis B virus genotype F2

Query: 2 TWLSQLLKD 10
TW+ + +KD
Sbjct: 106 TWIEEYIKD 114


>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)

Query: 1 TTWLSQLLKD 10
T WL LL+D
Sbjct: 93 TDWLLNLLQD 102


>sp|X_HBVF1|PROTEIN X|Hepatitis B virus genotype F2

Query: 2 TWLSQLLKD 10
TW+ + +KD
Sbjct: 106 TWIEEYIKD 114


>sp|VG45_ICHVA|UNCHARACTERIZED protein ORF45|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 TWLSQLLK 9
TW+ Q+LK
Sbjct: 175 TWIPQILK 182


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3 WLSQLLK 9
WL QL+K
Sbjct: 2769 WLKQLIK 2775


>sp|VL2_HPV32|MINOR capsid protein L2|Human papillomavirus type 32

Query: 2 TWLSQLLK 9
TW Q+LK
Sbjct: 39 TWADQILK 46


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 3 WLSQLLK 9
WL QL+K
Sbjct: 2769 WLKQLIK 2775


>sp|POLN_EPMV|NON-STRUCTURAL replication polyprotein|Eggplant mosaic virus

Query: 1 TTWLSQLLK 9
+TW S LLK
Sbjct: 1015 STWESSLLK 1023




3|Sequence|11|20|QLLKDNSYPL

>sp|SCP_HHV2H|SMALL capsomere-interacting protein|Human herpesvirus 2 (strain HG52)

Query: 1 QLLKDNSYP 9
Q + DNSYP
Sbjct: 33 QFIMDNSYP 41


>sp|ORF4_SPV1C|UNCHARACTERIZED protein ORF4|Spiroplasma virus SpV1-C74 (SpV1)

Query: 2 LLKDNSYPL 10
L+ DNSYP+
Sbjct: 66 LIYDNSYPI 74


>sp|ORF4_SPV1R|UNCHARACTERIZED protein ORF4|Spiroplasma virus SpV1-R8A2 B (SpV1)

Query: 2 LLKDNSYPL 10
L+ DNSYP+
Sbjct: 63 LIYDNSYPI 71


>sp|PK1_NPVHZ|SERINE/THREONINE-PROTEIN kinase 1|Heliothis zea nuclear polyhedrosis virus

Query: 1 QLLKDNSY 8
QL+KDN Y
Sbjct: 63 QLMKDNRY 70


>sp|HEMA_I80AD|HEMAGGLUTININ A virus (strain A/Gull/Minnesota/945/1980

Query: 4 KDNSYPL 10
KDN YP+
Sbjct: 170 KDNRYPV 176


>sp|VP1_SV40|MAJOR capsid protein VP1|Simian virus 40 (SV40)

Query: 2 LLKDNSYPL 10
L KDN+YP+
Sbjct: 198 LDKDNAYPV 206


>sp|HEMA_I83A3|HEMAGGLUTININ A virus (strain A/Duck/Ireland/113/1983

Query: 4 KDNSYP 9
KDN+YP
Sbjct: 169 KDNAYP 174


>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959

Query: 4 KDNSYP 9
KDN+YP
Sbjct: 169 KDNAYP 174


>sp|RDRP_IPNVJ|RNA-DIRECTED RNA polymerase|Infectious pancreatic necrosis virus (strain

Query: 1 QLLKDNSY 8
Q LKDN Y
Sbjct: 50 QFLKDNKY 57


>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)

Query: 2 LLKDNSYPL 10
LLK++S+PL
Sbjct: 266 LLKEDSWPL 274


>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky

Query: 4 KDNSYP 9
KDN+YP
Sbjct: 169 KDNAYP 174


>sp|PG115_VACCC|CORE protein OPG115|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 LLKDNSYP 9
++KDN YP
Sbjct: 5 IVKDNKYP 12


>sp|PG115_MONPV|CORE protein OPG115|Monkeypox virus (MPXV)

Query: 2 LLKDNSYP 9
++KDN YP
Sbjct: 5 IVKDNKYP 12


>sp|PG115_VACCT|CORE protein OPG115|Vaccinia virus (strain Tian Tan)

Query: 2 LLKDNSYP 9
++KDN YP
Sbjct: 5 IVKDNKYP 12


>sp|D3_CAMPS|27 kDa core protein|Camelpox virus (strain CMS)

Query: 2 LLKDNSYP 9
++KDN YP
Sbjct: 5 IVKDNKYP 12


>sp|D3_CAMPM|27 kDa core protein|Camelpox virus (strain M-96)

Query: 2 LLKDNSYP 9
++KDN YP
Sbjct: 5 IVKDNKYP 12


>sp|PG115_VACCA|CORE protein OPG115|Vaccinia virus (strain Ankara) (VACV)

Query: 2 LLKDNSYP 9
++KDN YP
Sbjct: 5 IVKDNKYP 12


>sp|PG115_VACCW|CORE protein OPG115|Vaccinia virus (strain Western Reserve)

Query: 2 LLKDNSYP 9
++KDN YP
Sbjct: 5 IVKDNKYP 12


>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New

Query: 4 KDNSYP 9
K+NSYP
Sbjct: 171 KENSYP 176


>sp|D3_VARV|CORE protein D3|Variola virus

Query: 2 LLKDNSYP 9
++KDN YP
Sbjct: 5 IVKDNKYP 12


>sp|D3_VAR67|CORE protein D3|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2 LLKDNSYP 9
++KDN YP
Sbjct: 5 IVKDNKYP 12


>sp|D3_RABPU|27 kDa core protein|Rabbitpox virus (strain Utrecht) (RPV)

Query: 2 LLKDNSYP 9
++KDN YP
Sbjct: 5 IVKDNKYP 12


>sp|36015_ASFB7|PROTEIN MGF 360-15R|African swine fever virus (strain

Query: 1 QLLKDNSY 8
QLL+DN++
Sbjct: 95 QLLRDNTF 102


>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930

Query: 4 KDNSYP 9
K+NSYP
Sbjct: 171 KENSYP 176


>sp|ICP22_EHV1K|TRANSCRIPTIONAL regulator ICP22 homolog|Equine herpesvirus 1 (strain Kentucky

Query: 1 QLLKDNSYPL 10
QLL + S+PL
Sbjct: 150 QLLPEQSFPL 159


>sp|ICP22_EHV1B|TRANSCRIPTIONAL regulator ICP22 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 1 QLLKDNSYPL 10
QLL + S+PL
Sbjct: 150 QLLPEQSFPL 159


>sp|VP4_ROTPG|OUTER capsid protein VP4|Rotavirus A (strain RVA/Pig/United

Query: 1 QLLKDNSY 8
+L+K+NSY
Sbjct: 342 ELIKENSY 349




4|Sequence|16|25|NSYPLVLGPK

>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 NSYPLVLGP 9
N+YPLV+ P
Sbjct: 1224 NAYPLVVTP 1232


>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 NSYPLVLGP 9
N YPLV+ P
Sbjct: 1300 NKYPLVVSP 1308


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 NSYPLVLGP 9
N YPLV+ P
Sbjct: 1300 NKYPLVVSP 1308


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1 NSYPLVLGP 9
N+YPLV+ P
Sbjct: 1224 NAYPLVVTP 1232


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 2 SYPLVLGPK 10
+YP ++GPK
Sbjct: 6626 NYPCIIGPK 6634


>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 2 SYPLVLG 8
S+PLVLG
Sbjct: 3843 SWPLVLG 3849


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 2 SYPLVLG 8
S+PLVLG
Sbjct: 3843 SWPLVLG 3849


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 2 SYPLVLGPK 10
+YP + GPK
Sbjct: 6619 NYPCISGPK 6627


>sp|DPOL_ADEG1|DNA polymerase|Fowl adenovirus A serotype 1

Query: 3 YPLVLGP 9
YP VLGP
Sbjct: 494 YPNVLGP 500


>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P

Query: 1 NSYPLVLGP 9
YP VLGP
Sbjct: 870 EEYPHVLGP 878




5|Sequence|21|30|VLGPKNFGAT

>sp|PP220_ASFWA|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 VLGPKNFG 8
VLG KNFG
Sbjct: 270 VLGTKNFG 277


>sp|PP220_ASFP4|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 VLGPKNFG 8
VLG KNFG
Sbjct: 270 VLGTKNFG 277


>sp|PP220_ASFM2|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 VLGPKNFG 8
VLG KNFG
Sbjct: 270 VLGTKNFG 277


>sp|PP220_ASFK5|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 VLGPKNFG 8
VLG KNFG
Sbjct: 270 VLGTKNFG 277


>sp|PP220_ASFB7|POLYPROTEIN pp220|African swine fever virus (strain

Query: 1 VLGPKNFG 8
VLG KNFG
Sbjct: 270 VLGTKNFG 277


>sp|RLIG2_BPT4|RNA ligase 2|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 LGPKNFG 8
+GPK+FG
Sbjct: 277 IGPKDFG 283


>sp|POLG_TRMVU|GENOME polyprotein|Triticum mosaic virus (isolate Triticum

Query: 1 VLGPKNFG 8
+LGP +FG
Sbjct: 1009 LLGPSDFG 1016


>sp|DPOL2_BPK54|DEPOLYMERASE 2, capsule K5-specific|Klebsiella phage K5-4 (Bacteriophage K5-4)

Query: 1 VLGPKNFGA 9
VL P N+GA
Sbjct: 36 VLSPANYGA 44


>sp|DPOL2_BPK52|DEPOLYMERASE 2, capsule K5-specific|Klebsiella phage K5-2 (Bacteriophage K5-2)

Query: 1 VLGPKNFGA 9
VL P N+GA
Sbjct: 37 VLSPANYGA 45


>sp|RDRP_TOBSV|RNA-DIRECTED RNA polymerase 2a|Tobacco streak virus (strain WC)

Query: 2 LGPKNFGAT 10
LGPKN T
Sbjct: 625 LGPKNLQVT 633


>sp|GP_HAZVJ|ENVELOPMENT polyprotein|Hazara virus (isolate JC280)

Query: 1 VLGPKNFG 8
V+GPKN G
Sbjct: 330 VVGPKNDG 337


>sp|BP48_BPT4|BASEPLATE tail-tube junction protein gp48|Enterobacteria phage T4

Query: 5 KNFGAT 10
KNFGAT
Sbjct: 296 KNFGAT 301




6|Sequence|26|35|NFGATPNKSN

>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)

Query: 3 GATPNKSN 10
GATP+KS+
Sbjct: 69 GATPSKSD 76


>sp|FIBER_BPSPP|TAIL spike protein|Bacillus phage SPP1 (Bacteriophage SPP1)

Query: 1 NFGATPNKS 9
N+G TP K+
Sbjct: 836 NYGGTPKKT 844




7|Sequence|31|40|PNKSNNHAHY

>sp|GLYC_HRSV7|MAJOR surface glycoprotein G|Human respiratory syncytial virus A

Query: 1 PNKSNNHAHY 10
PNK NNH H+
Sbjct: 156 PNKPNNHFHF 165


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 5 NNHAHY 10
NNH HY
Sbjct: 2401 NNHKHY 2406


Query: 2 NKSNNHAHY 10
N+ NN +HY
Sbjct: 3644 NQGNNPSHY 3652


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 NKSNNHAHY 10
NK +HAH+
Sbjct: 1954 NKDEDHAHW 1962


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 NKSNNHAHY 10
NK +HAH+
Sbjct: 1954 NKDEDHAHW 1962


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1 PNKSNNHAHY 10
PNK+++ HY
Sbjct: 51 PNKTDHSYHY 60


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 5 NNHAHY 10
NNH HY
Sbjct: 2401 NNHKHY 2406


Query: 2 NKSNNHAHY 10
N+ NN +HY
Sbjct: 3644 NQGNNPSHY 3652


>sp|UNG_GAHVM|URACIL-DNA glycosylase|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 PNKSNNHAH 9
P+ NNH H
Sbjct: 61 PSSDNNHIH 69


>sp|GLYC_HRSV|MAJOR surface glycoprotein G|Human respiratory syncytial virus

Query: 1 PNKSNNHAHY 10
PNK NN H+
Sbjct: 156 PNKPNNDFHF 165


>sp|GLYC_HRSV5|MAJOR surface glycoprotein G|Human respiratory syncytial virus A

Query: 1 PNKSNNHAHY 10
PNK NN H+
Sbjct: 156 PNKPNNDFHF 165


>sp|GLYC_HRSV4|MAJOR surface glycoprotein G|Human respiratory syncytial virus A

Query: 1 PNKSNNHAHY 10
PNK NN H+
Sbjct: 156 PNKPNNDFHF 165


>sp|GLYC_HRSV6|MAJOR surface glycoprotein G|Human respiratory syncytial virus A

Query: 1 PNKSNNHAHY 10
PNK NN H+
Sbjct: 156 PNKPNNDFHF 165


>sp|YL766_MIMIV|PUTATIVE ankyrin repeat protein L766|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 NKSNNHAHY 10
+KSNNH Y
Sbjct: 186 SKSNNHIDY 194




8|Sequence|36|45|NHAHYYNHPN

>sp|VP7_RRSVT|MICROTUBULE-ASSOCIATED protein VP7|Rice ragged stunt virus (isolate

Query: 4 HYYNHP 9
HYY HP
Sbjct: 98 HYYVHP 103


>sp|VL2_PAPVE|MINOR capsid protein L2|European elk papillomavirus (EEPV)

Query: 4 HYYNHPN 10
HYY HP+
Sbjct: 460 HYYLHPS 466


>sp|MB43_VZVO|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2 HAHYYN 7
H HYYN
Sbjct: 147 HIHYYN 152


>sp|MB43_VZVD|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 HAHYYN 7
H HYYN
Sbjct: 147 HIHYYN 152


>sp|VL2_OVPVD|MINOR capsid protein L2|Odocoileus virginianus papillomavirus 1 (DPV)

Query: 4 HYYNHPN 10
HYY HP+
Sbjct: 474 HYYLHPS 480


>sp|RDRP_BPGA|RNA-DIRECTED RNA polymerase beta chain|Enterobacteria phage GA (Bacteriophage

Query: 1 NHAHYYNHPN 10
NHA Y H N
Sbjct: 475 NHAFPYGHEN 484


>sp|FPS_AVISP|TYROSINE-PROTEIN kinase transforming protein Fps|Avian sarcoma virus (strain PRCII)

Query: 6 YNHPN 10
YNHPN
Sbjct: 325 YNHPN 329


>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 3 AHYYNHPN 10
A Y+NH N
Sbjct: 385 ADYHNHSN 392


>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 3 AHYYNHPN 10
A Y+NH N
Sbjct: 385 ADYHNHSN 392


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 3 AHYYNHPN 10
A Y+NH N
Sbjct: 385 ADYHNHSN 392


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 3 AHYYNHPN 10
A Y+NH N
Sbjct: 385 ADYHNHSN 392


>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)

Query: 1 NHAHYYNHP 9
NH YN P
Sbjct: 223 NHTQIYNGP 231


>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate

Query: 1 NHAHYYNHPN 10
NH+ YY H N
Sbjct: 88 NHSTYYVHEN 97


>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)

Query: 1 NHAHYY 6
NHAH Y
Sbjct: 560 NHAHVY 565


>sp|VIF_SIVCZ|VIRION infectivity factor|Simian immunodeficiency virus (isolate CPZ

Query: 2 HAHYYNHPN 10
+ H+Y+HPN
Sbjct: 40 YRHHYDHPN 48


>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2 HAHYYNH 8
H HYY H
Sbjct: 392 HYHYYGH 398


>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 HAHYYNH 8
H HYY H
Sbjct: 392 HYHYYGH 398


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 3 AHYYNHPN 10
A Y+NH N
Sbjct: 385 ADYHNHSN 392


>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)

Query: 1 NHAHYY 6
NHAH Y
Sbjct: 560 NHAHVY 565




9|Sequence|41|50|YNHPNPDFPN

>sp|POLG_PYFV1|GENOME polyprotein|Parsnip yellow fleck virus (isolate

Query: 1 YNHPNPDF 8
Y HP PDF
Sbjct: 782 YLHPGPDF 789


>sp|PHOSP_MMVR|PHOSPHOPROTEIN mosaic virus (isolate Maize/United

Query: 3 HPNPDFPN 10
HPNP PN
Sbjct: 10 HPNPPVPN 17


>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)

Query: 1 YNHPNPDF 8
Y PNPD+
Sbjct: 123 YRDPNPDY 130


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 YNHPNPDF 8
Y PNPD+
Sbjct: 446 YRDPNPDY 453


>sp|FIB12_BPPZA|PRENECK appendage protein|Bacillus phage PZA (Bacteriophage PZA)

Query: 4 PNPDF-PN 10
PNPDF PN
Sbjct: 776 PNPDFDPN 783


>sp|VIF_SIVCZ|VIRION infectivity factor|Simian immunodeficiency virus (isolate CPZ

Query: 1 YNHPNP 6
Y+HPNP
Sbjct: 44 YDHPNP 49


>sp|IE1_NPVAC|TRANS-ACTIVATING transcriptional regulatory protein|Autographa californica nuclear

Query: 1 YNHPNPD 7
YNHP PD
Sbjct: 40 YNHPTPD 46


>sp|AC124_NPVAC|PROTEIN AC124|Autographa californica nuclear polyhedrosis virus

Query: 1 YNHPNPDFPN 10
YN P P F N
Sbjct: 228 YNDPPPPFSN 237


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 1 YNHPNPDFP 9
+N P P FP
Sbjct: 2273 FNPPRPKFP 2281


>sp|DPOL_ALHV1|DNA polymerase catalytic subunit|Alcelaphine herpesvirus 1 (strain

Query: 3 HPNPDF 8
HPNP F
Sbjct: 761 HPNPKF 766


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 3 HPNPDFPN 10
HP+P++ N
Sbjct: 5105 HPDPEYQN 5112


>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)

Query: 4 PNPDF 8
PNPDF
Sbjct: 2695 PNPDF 2699


>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)

Query: 1 YNHPNPDFPN 10
Y+HPN P+
Sbjct: 129 YDHPNDYTPD 138


>sp|TEG5_EHV1V|TEGUMENT protein UL47 homolog|Equine herpesvirus 1 (strain V592)

Query: 2 NHPNPDF 8
NH NP F
Sbjct: 326 NHTNPSF 332


>sp|TEG5_EHV1B|TEGUMENT protein UL47 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 2 NHPNPDF 8
NH NP F
Sbjct: 326 NHTNPSF 332


>sp|DUT_HHV7J|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 7 (strain JI)

Query: 1 YNHPNPDF 8
YN P+P+F
Sbjct: 252 YNFPSPNF 259


>sp|AC41_NPVAC|PROTEIN AC41|Autographa californica nuclear polyhedrosis virus

Query: 1 YNHPNP 6
+ HPNP
Sbjct: 73 FEHPNP 78


>sp|POL2_RCMV|RNA2 polyprotein|Red clover mottle virus (RCMV)

Query: 1 YNHPNPDFP 9
++ PN DFP
Sbjct: 262 FSLPNNDFP 270


>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)

Query: 2 NHPNPDFPN 10
N NP++PN
Sbjct: 3236 NRNNPEWPN 3244


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 4 PNPDFP 9
PN DFP
Sbjct: 117 PNQDFP 122


>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)

Query: 1 YNHPNPDF 8
Y P+PDF
Sbjct: 59 YREPDPDF 66


>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)

Query: 5 NPDFP 9
NPDFP
Sbjct: 369 NPDFP 373


>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20

Query: 3 HPNPDFP 9
+PNPD P
Sbjct: 482 YPNPDLP 488


>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)

Query: 5 NPDFP 9
NPDFP
Sbjct: 369 NPDFP 373


>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus

Query: 3 HPNPDFPN 10
+PNP F N
Sbjct: 39 YPNPKFNN 46


>sp|UBC_ASFM2|UBIQUITIN-CONJUGATING enzyme E2|African swine fever virus (isolate

Query: 2 NHPNPDFP 9
N PNPD P
Sbjct: 119 NEPNPDSP 126




10|Sequence|46|58|PDFPNSPHPYHPR

>sp|COLL8_MIMIV|PUTATIVE collagenous domain-containing protein R238|Acanthamoeba polyphaga

Query: 5 NSPHPYHP 12
NSPH Y+P
Sbjct: 5 NSPHAYYP 12


>sp|VNS3_AHSV8|NON-STRUCTURAL protein NS3|African horse sickness virus 8

Query: 4 PNSPHPYHP 12
P P PYHP
Sbjct: 22 PYIPPPYHP 30


>sp|VNS3_AHSV2|NON-STRUCTURAL protein NS3|African horse sickness virus 2

Query: 4 PNSPHPYHP 12
P P PYHP
Sbjct: 22 PYIPPPYHP 30


>sp|VNS3_AHSV1|NON-STRUCTURAL protein NS3|African horse sickness virus 1

Query: 4 PNSPHPYHP 12
P P PYHP
Sbjct: 22 PYIPPPYHP 30


>sp|ETF1_FOWPN|EARLY transcription factor 70 kDa|Fowlpox virus (strain NVSL) (FPV)

Query: 2 DFPNSPHPY 10
++ +SPHPY
Sbjct: 527 NYRSSPHPY 535


>sp|NS2_BANNV|NON-STRUCTURAL protein 2|Banna virus (BAV)

Query: 3 FPNSPHPYHPR 13
FP PH Y R
Sbjct: 300 FPTLPHEYKGR 310


>sp|X_PAVHV|UNCHARACTERIZED protein X|Human parvovirus B19 (strain HV)

Query: 3 FPNSPHPYHP 12
+ +P PYHP
Sbjct: 4 YLTTPMPYHP 13


>sp|POLG_SBMVG|GENOME polyprotein|Soybean mosaic virus (strain G2)

Query: 2 DFPNSPHPY 10
D P +PH Y
Sbjct: 872 DCPQAPHSY 880


>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)

Query: 2 DFPNSPHPY 10
D P +PH Y
Sbjct: 872 DCPQAPHSY 880


>sp|MVP_SBMVG|P3N-PIPO polyprotein|Soybean mosaic virus (strain G2)

Query: 2 DFPNSPHPY 10
D P +PH Y
Sbjct: 872 DCPQAPHSY 880


>sp|VF295_IIV3|UNCHARACTERIZED protein 016R|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 FPNSPHP 9
+PN PHP
Sbjct: 506 YPNYPHP 512


>sp|FIB11_BPE32|PROBABLE tail fiber protein|Escherichia phage Phieco32 (Escherichia coli

Query: 3 FPNSPHP 9
FP+S HP
Sbjct: 563 FPDSSHP 569


>sp|MVP_SBMVN|P3N-PIPO polyprotein|Soybean mosaic virus (strain N)

Query: 2 DFPNSPHPY 10
D P +PH Y
Sbjct: 872 DCPQAPHSY 880


>sp|ICP27_HHV6Z|MRNA export factor ICP27 homolog|Human herpesvirus 6B (strain Z29)

Query: 3 FPNSPHPYH 11
FPN PH Y
Sbjct: 374 FPNLPHEYR 382


>sp|VPU_SIVTN|PROTEIN Vpu|Simian immunodeficiency virus (isolate TAN1)

Query: 7 PHPYHPR 13
PH Y+PR
Sbjct: 74 PHNYNPR 80


>sp|RDRP_ASPVP|RNA replication polyprotein|Apple stem pitting virus (isolate

Query: 6 SPHPYHP 12
SPH Y P
Sbjct: 63 SPHSYRP 69


>sp|VE2_BPV2|REGULATORY protein E2|Bos taurus papillomavirus 2 (Bovine

Query: 7 PHPYH 11
PHPYH
Sbjct: 258 PHPYH 262


>sp|YR654_MIMIV|PUTATIVE fucosyltransferase R654|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PDFPN 5
PDFPN
Sbjct: 537 PDFPN 541


>sp|RDRP_PLRVW|PROTEIN P1-P2|Potato leafroll virus (strain

Query: 5 NSPHPYHPR 13
N P YHPR
Sbjct: 593 NIPGYYHPR 601


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 1 PDFPNSPHP 9
PDF + HP
Sbjct: 697 PDFEDERHP 705


>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)

Query: 1 PDFPNSPHPYHPR 13
P PN+ PYH R
Sbjct: 396 PVPPNAYTPYHLR 408


>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)

Query: 1 PDFPNSPHPYHPR 13
P PN+ PYH R
Sbjct: 398 PVPPNAYTPYHLR 410


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 PDFPNSPHP 9
P FP P+P
Sbjct: 443 PQFPCGPNP 451


>sp|AC83_NPVAC|CAPSID-ASSOCIATED protein AC83|Autographa californica nuclear polyhedrosis virus

Query: 1 PDFPNSPHPYHP 12
D+ + H YHP
Sbjct: 180 KDYSTNAHLYHP 191


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 1 PDFPNSPHP 9
PDF + HP
Sbjct: 697 PDFEDERHP 705


>sp|VP91_NPVBM|CAPSID-ASSOCIATED protein Vp91|Bombyx mori nuclear polyhedrosis virus

Query: 1 PDFPNSPHPYHP 12
D+ ++ H YHP
Sbjct: 180 KDYSSNEHLYHP 191


>sp|CAPSD_GOCV|PROBABLE capsid protein|Goose circovirus (GoCV)

Query: 6 SPHPYHPR 13
SPH YH R
Sbjct: 166 SPHRYHKR 173


>sp|11011_ASFP4|PROTEIN MGF 110-11L|African swine fever virus (isolate

Query: 1 PDFPNSPHP 9
PD P + HP
Sbjct: 50 PDLPRTQHP 58


>sp|YR366_MIMIV|PUTATIVE ATP-dependent RNA helicase R366|Acanthamoeba polyphaga mimivirus

Query: 2 DFPNSPHPYH 11
D N+P PY+
Sbjct: 1154 DILNNPRPYY 1163






THE END