1|Sequence|1|10|MPPCLTTWLS
>sp|MIR2_HHV8P|E3 ubiquitin-protein ligase MIR2|Human herpesvirus 8 type P
Query: 2 PPCLTTWLS 10
P CL+TWL+
Sbjct: 41 PQCLSTWLT 49
>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P
Query: 4 CLTTWLS 10
CL+TWL+
Sbjct: 37 CLSTWLT 43
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 4 CLTTWLS 10
CL TW+S
Sbjct: 283 CLITWIS 289
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 4 CLTTWLS 10
CL TW+S
Sbjct: 283 CLITWIS 289
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 2 PPCLTTW 8
PP +TTW
Sbjct: 339 PPDITTW 345
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 4 CLTTWLS 10
CL TW+S
Sbjct: 283 CLITWIS 289
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 PPCLTTW 8
PP +TTW
Sbjct: 339 PPDITTW 345
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 3 PCLTTWL 9
P LTTW+
Sbjct: 374 PTLTTWI 380
>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)
Query: 3 PCLTTWL 9
PC+ TW+
Sbjct: 141 PCMKTWM 147
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 PCLTTWL 9
PC T+WL
Sbjct: 1975 PCATSWL 1981
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 3 PCLTTWL 9
PC+ TW+
Sbjct: 151 PCMKTWI 157
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 PCLTTWL 9
PC T+WL
Sbjct: 1976 PCATSWL 1982
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 MPPCLT 6
+PPC++
Sbjct: 252 LPPCIS 257
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 PPCLTT 7
PPC+T+
Sbjct: 1288 PPCVTS 1293
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 PPCLTTWLS 10
PP L TW S
Sbjct: 2297 PPVLETWKS 2305
Query: 3 PCLTTWL 9
PC ++WL
Sbjct: 1972 PCSSSWL 1978
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 MPPCLT 6
+PPCL+
Sbjct: 575 LPPCLS 580
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 MPPCLT 6
+PPCL+
Sbjct: 575 LPPCLS 580
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 PCLTTWL 9
PC +TWL
Sbjct: 1975 PCGSTWL 1981
Query: 2 PPCLTTW 8
PP L TW
Sbjct: 2300 PPLLETW 2306
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 MPPCLTTWL 9
+ PC ++WL
Sbjct: 1969 IAPCASSWL 1977
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 2 PPCL 5
PPCL
Sbjct: 37 PPCL 40
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain
Query: 2 PPCL 5
PPCL
Sbjct: 37 PPCL 40
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 2 PPCL 5
PPCL
Sbjct: 37 PPCL 40
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 2 PPCL 5
PPCL
Sbjct: 37 PPCL 40
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 LTTWL 9
LTTWL
Sbjct: 2336 LTTWL 2340
>sp|PG161_MONPV|PROTEIN OPG161|Monkeypox virus (MPXV)
Query: 5 LTTWL 9
LTTWL
Sbjct: 140 LTTWL 144
>sp|PG161_VARV|PROTEIN OPG161|Variola virus
Query: 5 LTTWL 9
LTTWL
Sbjct: 139 LTTWL 143
>sp|PG161_VAR67|PROTEIN OPG161|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 LTTWL 9
LTTWL
Sbjct: 139 LTTWL 143
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 5 LTTWL 9
LTTWL
Sbjct: 2336 LTTWL 2340
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 PCLTTWL 9
PC ++WL
Sbjct: 1976 PCASSWL 1982
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 2 PPCLTTWL 9
P C WL
Sbjct: 12 PICTAAWL 19
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 PPCLTT 7
PPC+T+
Sbjct: 1288 PPCVTS 1293
>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 MPPCLT 6
+PPC T
Sbjct: 180 LPPCHT 185
>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 MPPCLT 6
+PPC T
Sbjct: 180 LPPCHT 185
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 4 CLTTWL 9
C+T+WL
Sbjct: 153 CVTSWL 158
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 4 CLTTWL 9
C+T+WL
Sbjct: 153 CVTSWL 158
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 PCLTTWL 9
PC TWL
Sbjct: 1972 PCDGTWL 1978
Query: 2 PPCLTTW 8
PP L TW
Sbjct: 2296 PPLLETW 2302
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 4 CLTTWL 9
C+T+WL
Sbjct: 153 CVTSWL 158
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 4 CLTTWL 9
C+T+WL
Sbjct: 153 CVTSWL 158
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 4 CLTTWL 9
C+T+WL
Sbjct: 153 CVTSWL 158
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 PCLTTWL 9
PC TWL
Sbjct: 1972 PCDGTWL 1978
Query: 2 PPCLTTW 8
PP L TW
Sbjct: 2296 PPLLETW 2302
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 4 CLTTWL 9
C+T+WL
Sbjct: 153 CVTSWL 158
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 4 CLTTWL 9
C+T+WL
Sbjct: 153 CVTSWL 158
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 PPCLTTW 8
PP L TW
Sbjct: 2299 PPLLETW 2305
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 4 CLTTWL 9
C+T+WL
Sbjct: 153 CVTSWL 158
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 4 CLTTWL 9
C+T+WL
Sbjct: 153 CVTSWL 158
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 PPCLTTW 8
PP L TW
Sbjct: 2298 PPLLETW 2304
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 LTTWL 9
LTTW+
Sbjct: 261 LTTWI 265
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 3 PCLTTWLS 10
PC + W S
Sbjct: 1492 PCTSQWNS 1499
2|Sequence|6|15|TTWLSQLLKD
>sp|X_HBVH2|PROTEIN X|Hepatitis B virus genotype H
Query: 1 TTWLSQLLKD 10
TTW+ + +KD
Sbjct: 105 TTWIEEYIKD 114
>sp|X_HBVH3|PROTEIN X|Hepatitis B virus genotype H
Query: 1 TTWLSQLLKD 10
TTW+ + +KD
Sbjct: 105 TTWIEEYIKD 114
>sp|X_HBVH1|PROTEIN X|Hepatitis B virus genotype H
Query: 1 TTWLSQLLKD 10
TTW+ + +KD
Sbjct: 105 TTWIEEYIKD 114
>sp|X_HBVF4|PROTEIN X|Hepatitis B virus genotype F2
Query: 2 TWLSQLLKD 10
TW+ + +KD
Sbjct: 106 TWIEEYIKD 114
>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 1 TTWLSQLLKD 10
T WL LL+D
Sbjct: 93 TDWLLNLLQD 102
>sp|X_HBVF1|PROTEIN X|Hepatitis B virus genotype F2
Query: 2 TWLSQLLKD 10
TW+ + +KD
Sbjct: 106 TWIEEYIKD 114
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 WLSQLLK 9
WL QL+K
Sbjct: 2769 WLKQLIK 2775
>sp|VL2_HPV32|MINOR capsid protein L2|Human papillomavirus type 32
Query: 2 TWLSQLLK 9
TW Q+LK
Sbjct: 39 TWADQILK 46
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 WLSQLLK 9
WL QL+K
Sbjct: 2769 WLKQLIK 2775
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 TTWLSQLLKD 10
+TW +Q L+D
Sbjct: 961 STWAAQGLRD 970
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 TTWLSQLLKD 10
+TW +Q L+D
Sbjct: 961 STWAAQGLRD 970
>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United
Query: 1 TTWLSQLLKD 10
T W +LLKD
Sbjct: 148 TRWYWKLLKD 157
>sp|X_HBVF2|PROTEIN X|Hepatitis B virus genotype F1
Query: 2 TWLSQLLKD 10
TW+ +KD
Sbjct: 106 TWIEDYIKD 114
>sp|X_HBVF6|PROTEIN X|Hepatitis B virus genotype F2
Query: 2 TWLSQLLKD 10
TW+ +KD
Sbjct: 106 TWIEDYIKD 114
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 3 WLSQLLKD 10
WL L+KD
Sbjct: 1282 WLGVLVKD 1289
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 3 WLSQLLKD 10
WL L+KD
Sbjct: 1285 WLGVLVKD 1292
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 4 LSQLLKD 10
LSQLL+D
Sbjct: 2000 LSQLLQD 2006
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 4 LSQLLKD 10
LSQLL+D
Sbjct: 1999 LSQLLQD 2005
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 2 TWLSQLLK 9
+W+S +LK
Sbjct: 1846 SWISAILK 1853
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 4 LSQLLKD 10
LSQLL+D
Sbjct: 1999 LSQLLQD 2005
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 TTWLSQLLKD 10
+TW S L+D
Sbjct: 955 STWASDGLRD 964
>sp|VPR_HV2D1|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 1 TTWLSQLLKD 10
+TW+ + LK+
Sbjct: 21 STWVIETLKE 30
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 TTWLSQLLKD 10
T W ++ LKD
Sbjct: 962 TDWAAEGLKD 971
3|Sequence|11|20|QLLKDNSYPL
>sp|SCP_HHV2H|SMALL capsomere-interacting protein|Human herpesvirus 2 (strain HG52)
Query: 1 QLLKDNSYP 9
Q + DNSYP
Sbjct: 33 QFIMDNSYP 41
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 4 KDNSYP 9
KDN+YP
Sbjct: 169 KDNAYP 174
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 2 LLKDNSYPL 10
LLK++S+PL
Sbjct: 266 LLKEDSWPL 274
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 4 KDNSYP 9
KDN+YP
Sbjct: 169 KDNAYP 174
>sp|PG115_VACCC|CORE protein OPG115|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LLKDNSYP 9
++KDN YP
Sbjct: 5 IVKDNKYP 12
>sp|PG115_MONPV|CORE protein OPG115|Monkeypox virus (MPXV)
Query: 2 LLKDNSYP 9
++KDN YP
Sbjct: 5 IVKDNKYP 12
>sp|PG115_VACCT|CORE protein OPG115|Vaccinia virus (strain Tian Tan)
Query: 2 LLKDNSYP 9
++KDN YP
Sbjct: 5 IVKDNKYP 12
>sp|PG115_VACCA|CORE protein OPG115|Vaccinia virus (strain Ankara) (VACV)
Query: 2 LLKDNSYP 9
++KDN YP
Sbjct: 5 IVKDNKYP 12
>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New
Query: 4 KDNSYP 9
K+NSYP
Sbjct: 171 KENSYP 176
>sp|D3_VARV|CORE protein D3|Variola virus
Query: 2 LLKDNSYP 9
++KDN YP
Sbjct: 5 IVKDNKYP 12
>sp|D3_VAR67|CORE protein D3|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 LLKDNSYP 9
++KDN YP
Sbjct: 5 IVKDNKYP 12
>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930
Query: 4 KDNSYP 9
K+NSYP
Sbjct: 171 KENSYP 176
>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943
Query: 4 KDNSYP 9
KD SYP
Sbjct: 170 KDGSYP 175
>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LLKDNSYP 9
LL DN YP
Sbjct: 212 LLDDNFYP 219
>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945
Query: 4 KDNSYP 9
KD SYP
Sbjct: 171 KDGSYP 176
>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940
Query: 4 KDNSYP 9
KD SYP
Sbjct: 171 KDGSYP 176
>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /
Query: 5 DNSYPL 10
DN+YPL
Sbjct: 378 DNNYPL 383
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 1 QLLKDN 6
QLL+DN
Sbjct: 11 QLLRDN 16
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 1 QLLKDN 6
QLL+DN
Sbjct: 11 QLLRDN 16
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 QLLKDN 6
QLL+DN
Sbjct: 11 QLLRDN 16
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 QLLKDN 6
QLL+DN
Sbjct: 11 QLLRDN 16
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 QLLKDNSYPL 10
Q+L S+PL
Sbjct: 1054 QILSQRSFPL 1063
>sp|VP1_POVBK|MAJOR capsid protein VP1|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 2 LLKDNSYPL 10
L K+N+YP+
Sbjct: 198 LDKNNAYPV 206
>sp|VP1_POVBA|MAJOR capsid protein VP1|BK polyomavirus (strain AS) (BKPyV)
Query: 2 LLKDNSYPL 10
L K+N+YP+
Sbjct: 198 LDKNNAYPV 206
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 4 KDNSYP 9
K+N+YP
Sbjct: 169 KNNAYP 174
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 4 KDNSYP 9
K+N+YP
Sbjct: 169 KNNAYP 174
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 2 LLKDNSY 8
L+K+NSY
Sbjct: 379 LIKNNSY 385
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 4 KDNSYP 9
KD++YP
Sbjct: 169 KDSTYP 174
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 QLLKDNSYP 9
++ KD YP
Sbjct: 961 KICKDKKYP 969
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 LLKDNSYPL 10
+LKDNS L
Sbjct: 3850 ILKDNSARL 3858
4|Sequence|16|25|NSYPLVLGPK
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 NSYPLVLGP 9
N+YPLV+ P
Sbjct: 1224 NAYPLVVTP 1232
Query: 3 YPLVLGP 9
YP ++GP
Sbjct: 6577 YPCMVGP 6583
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 NSYPLVLGP 9
N+YPLV+ P
Sbjct: 1224 NAYPLVVTP 1232
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 NSYPLVLGP 9
YP VLGP
Sbjct: 870 EEYPHVLGP 878
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 SYPLVLGP 9
+YP++L P
Sbjct: 1118 NYPVILNP 1125
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 NSYPLVLG 8
N YP VLG
Sbjct: 945 NMYPAVLG 952
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 NSYPLVLG 8
N YP VLG
Sbjct: 945 NMYPAVLG 952
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 NSYPLVLG 8
N YP VLG
Sbjct: 945 NMYPAVLG 952
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 PLVLGPK 10
PLV GP+
Sbjct: 1397 PLVKGPR 1403
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 PLVLGPK 10
PLV GP+
Sbjct: 1397 PLVKGPR 1403
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 SYPLVLGPK 10
S+P++ PK
Sbjct: 1640 SHPILFSPK 1648
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 SYPLVLG 8
S+P+VLG
Sbjct: 507 SHPIVLG 513
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 SYPLVLG 8
S+P+VLG
Sbjct: 500 SHPIVLG 506
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 SYPLVLG 8
S+P+VLG
Sbjct: 507 SHPIVLG 513
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 SYPLVLG 8
S+P+VLG
Sbjct: 507 SHPIVLG 513
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 2 SYPLVLG 8
S+P+VLG
Sbjct: 494 SHPIVLG 500
5|Sequence|21|30|VLGPKNFGAT
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 VLGPKNFGAT 10
V PK FG T
Sbjct: 1504 VPAPKQFGKT 1513
>sp|CAP6_ADE02|PRE-PROTEIN VI|Human adenovirus C serotype 2
Query: 3 GPKNFGAT 10
G KNFG+T
Sbjct: 43 GIKNFGST 50
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 3 GPKNFGA 9
GPKN+ A
Sbjct: 2327 GPKNYSA 2333
>sp|CAP6_ADE05|PRE-PROTEIN VI|Human adenovirus C serotype 5
Query: 3 GPKNFGAT 10
G KNFG+T
Sbjct: 43 GIKNFGST 50
>sp|CAP6_ADE12|PRE-PROTEIN VI|Human adenovirus A serotype 12
Query: 3 GPKNFGAT 10
G KNFG+T
Sbjct: 43 GLKNFGST 50
6|Sequence|26|35|NFGATPNKSN
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 3 GATPNKSN 10
GATP+KS+
Sbjct: 69 GATPSKSD 76
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 2 FGATPNKS 9
FG TP +S
Sbjct: 123 FGGTPRRS 130
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 1 NFGATPNKS 9
+FGATP ++
Sbjct: 1184 SFGATPREA 1192
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 NFGATPNK 8
N G TP K
Sbjct: 1674 NLGGTPTK 1681
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 NFGATPNK 8
N G TP K
Sbjct: 1664 NLGGTPTK 1671
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 NFGATPNK 8
N G TP K
Sbjct: 1682 NLGGTPTK 1689
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 3 GATPNKSN 10
G TPN N
Sbjct: 2064 GGTPNARN 2071
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 3 GATPNKSN 10
G TPN N
Sbjct: 2064 GGTPNARN 2071
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 NFGATPNK 8
N G TP K
Sbjct: 1684 NLGGTPTK 1691
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 NFGATPNK 8
N G TP K
Sbjct: 1674 NLGGTPTK 1681
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 NFGATPNK 8
N G TP K
Sbjct: 1672 NLGGTPTK 1679
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 NFGATPNK 8
N G TP K
Sbjct: 1664 NLGGTPTK 1671
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 NFGATPNK 8
N G TP K
Sbjct: 1668 NLGGTPTK 1675
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 NFGATPNK 8
N G TP K
Sbjct: 1677 NLGGTPTK 1684
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 NFGATPNK 8
N G TP K
Sbjct: 1675 NLGGTPTK 1682
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 NFGATPNK 8
N G TP K
Sbjct: 1676 NLGGTPTK 1683
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 NFGATPNK 8
N G TP K
Sbjct: 1663 NLGGTPTK 1670
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 NFGATPNK 8
N G TP K
Sbjct: 1666 NLGGTPTK 1673
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 NFGATPNK 8
N G TP K
Sbjct: 1666 NLGGTPTK 1673
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 NFGATPNK 8
N G TP K
Sbjct: 1666 NLGGTPTK 1673
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 NFGATPNK 8
N G TP K
Sbjct: 1665 NLGGTPTK 1672
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 NFGATPNK 8
N G TP K
Sbjct: 1665 NLGGTPTK 1672
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 1 NFGATPNKS 9
NFG TP S
Sbjct: 428 NFGLTPPPS 436
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 GATPNKS 9
GATPN S
Sbjct: 179 GATPNAS 185
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 1 NFGATP 6
NFG TP
Sbjct: 396 NFGITP 401
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 1 NFGATP 6
NFG TP
Sbjct: 401 NFGLTP 406
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 GATPNKS 9
GATPN S
Sbjct: 179 GATPNAS 185
7|Sequence|31|40|PNKSNNHAHY
>sp|GLYC_HRSV7|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 1 PNKSNNHAHY 10
PNK NNH H+
Sbjct: 156 PNKPNNHFHF 165
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 NKSNNHAHY 10
NK +HAH+
Sbjct: 1954 NKDEDHAHW 1962
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 NKSNNHAHY 10
NK +HAH+
Sbjct: 1954 NKDEDHAHW 1962
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 PNKSNNHAHY 10
PNK+++ HY
Sbjct: 51 PNKTDHSYHY 60
>sp|GLYC_HRSV|MAJOR surface glycoprotein G|Human respiratory syncytial virus
Query: 1 PNKSNNHAHY 10
PNK NN H+
Sbjct: 156 PNKPNNDFHF 165
>sp|GLYC_HRSV5|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 1 PNKSNNHAHY 10
PNK NN H+
Sbjct: 156 PNKPNNDFHF 165
>sp|GLYC_HRSV4|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 1 PNKSNNHAHY 10
PNK NN H+
Sbjct: 156 PNKPNNDFHF 165
>sp|GLYC_HRSV6|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 1 PNKSNNHAHY 10
PNK NN H+
Sbjct: 156 PNKPNNDFHF 165
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NKSNNH 7
NKS+NH
Sbjct: 188 NKSDNH 193
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 4 SNNHAHY 10
+N+H+H+
Sbjct: 513 ANSHSHF 519
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 4 SNNHAH 9
S NHAH
Sbjct: 558 SGNHAH 563
>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13
Query: 1 PNKSNNHA 8
PN S HA
Sbjct: 333 PNNSQKHA 340
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 4 SNNHAH 9
S NHAH
Sbjct: 558 SGNHAH 563
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 SNNHAH 9
S NHAH
Sbjct: 558 SGNHAH 563
>sp|UL33_HHV7J|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 7 (strain JI)
Query: 2 NKSNNH 7
+K+NNH
Sbjct: 153 DKNNNH 158
>sp|VE8E2_HPV13|PROTEIN E8^E2C|Human papillomavirus 13
Query: 1 PNKSNNHA 8
PN S HA
Sbjct: 143 PNNSQKHA 150
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PNKSNNH 7
PNK NN
Sbjct: 679 PNKINNQ 685
>sp|GLYC_HRSV3|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 1 PNKSNNHAHY 10
P+K NN H+
Sbjct: 156 PSKPNNDFHF 165
>sp|GLYC_HRSVA|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 1 PNKSNNHAHY 10
P+K NN H+
Sbjct: 156 PSKPNNDFHF 165
8|Sequence|36|45|NHAHYYNHPN
>sp|MB43_VZVO|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 HAHYYN 7
H HYYN
Sbjct: 147 HIHYYN 152
>sp|MB43_VZVD|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 HAHYYN 7
H HYYN
Sbjct: 147 HIHYYN 152
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 AHYYNHPN 10
A Y+NH N
Sbjct: 385 ADYHNHSN 392
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 1 NHAHYYNHP 9
NH YN P
Sbjct: 223 NHTQIYNGP 231
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 1 NHAHYYNHPN 10
NH+ YY H N
Sbjct: 88 NHSTYYVHEN 97
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 HAHYYNH 8
HA Y NH
Sbjct: 1512 HAKYKNH 1518
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 1 NHAHYY 6
NHAH Y
Sbjct: 560 NHAHVY 565
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 HAHYYNH 8
H HYY H
Sbjct: 392 HYHYYGH 398
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 HAHYYNH 8
H HYY H
Sbjct: 392 HYHYYGH 398
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 1 NHAHYY 6
NHAH Y
Sbjct: 560 NHAHVY 565
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 AHYYNHPN 10
A Y+NH N
Sbjct: 385 ADYHNHSN 392
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 NHAHYY 6
NHAH Y
Sbjct: 560 NHAHVY 565
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 NHAHYYNH 8
NH +++ H
Sbjct: 915 NHEYFFQH 922
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 NHAHYYNH 8
NH +++ H
Sbjct: 916 NHEYFFQH 923
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 NHAHYYNH 8
NH +++ H
Sbjct: 915 NHEYFFQH 922
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 5 YYNH 8
YYNH
Sbjct: 233 YYNH 236
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 5 YYNH 8
YYNH
Sbjct: 233 YYNH 236
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 NHAHYYNHP 9
NH YN P
Sbjct: 223 NHTQIYNGP 231
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 4 HYYNH 8
H YNH
Sbjct: 268 HIYNH 272
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 4 HYYNH 8
H YNH
Sbjct: 268 HIYNH 272
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 4 HYYNH 8
H YNH
Sbjct: 268 HIYNH 272
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 4 HYYNH 8
H YNH
Sbjct: 268 HIYNH 272
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 5 YYNHP 9
Y NHP
Sbjct: 926 YLNHP 930
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 5 YYNHP 9
Y NHP
Sbjct: 926 YLNHP 930
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 5 YYNHP 9
Y NHP
Sbjct: 926 YLNHP 930
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HAHYYNH 8
HA +Y H
Sbjct: 176 HALFYKH 182
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 HAHYYNHPN 10
H H N PN
Sbjct: 1281 HLHTDNGPN 1289
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 HAHYYNHPN 10
H H N PN
Sbjct: 1282 HLHTDNGPN 1290
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 5 YYNHPN 10
Y+N PN
Sbjct: 1254 YFNGPN 1259
>sp|VL2_HPV37|MINOR capsid protein L2|Human papillomavirus 37
Query: 5 YYNHPN 10
YY HP+
Sbjct: 518 YYLHPS 523
>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23
Query: 5 YYNHPN 10
YY HP+
Sbjct: 503 YYLHPS 508
>sp|VL2_HPV22|MINOR capsid protein L2|Human papillomavirus 22
Query: 5 YYNHPN 10
YY HP+
Sbjct: 508 YYLHPS 513
>sp|VL2_HPV15|MINOR capsid protein L2|Human papillomavirus 15
Query: 5 YYNHPN 10
YY HP+
Sbjct: 517 YYLHPS 522
>sp|VL2_HPV09|MINOR capsid protein L2|Human papillomavirus 9
Query: 5 YYNHPN 10
YY HP+
Sbjct: 517 YYLHPS 522
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 4 HYYNHPN 10
Y NHP+
Sbjct: 524 QYLNHPS 530
9|Sequence|41|50|YNHPNPDFPN
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 1 YNHPNPDF 8
Y PNPD+
Sbjct: 123 YRDPNPDY 130
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YNHPNPDF 8
Y PNPD+
Sbjct: 446 YRDPNPDY 453
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 YNHPNPDFP 9
+N P P FP
Sbjct: 2273 FNPPRPKFP 2281
>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 YNHPNPDFPN 10
Y+HPN P+
Sbjct: 129 YDHPNDYTPD 138
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 NHPNP 6
+HPNP
Sbjct: 4312 DHPNP 4316
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 3 HPNPDFP 9
P+P+FP
Sbjct: 2635 QPSPNFP 2641
>sp|DUT_HHV7J|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 7 (strain JI)
Query: 1 YNHPNPDF 8
YN P+P+F
Sbjct: 252 YNFPSPNF 259
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 NHPNP 6
+HPNP
Sbjct: 4335 DHPNP 4339
Query: 4 PNPDFPN 10
PN +PN
Sbjct: 1916 PNQPYPN 1922
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 HPNPDFP 9
P+P+FP
Sbjct: 2635 QPSPNFP 2641
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 4 PNPDFP 9
PN DFP
Sbjct: 117 PNQDFP 122
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 1 YNHPNPDF 8
Y P+PDF
Sbjct: 59 YREPDPDF 66
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 5 NPDFP 9
NPDFP
Sbjct: 369 NPDFP 373
>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20
Query: 3 HPNPDFP 9
+PNPD P
Sbjct: 482 YPNPDLP 488
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 5 NPDFP 9
NPDFP
Sbjct: 369 NPDFP 373
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 NHPNP 6
+HPNP
Sbjct: 4312 DHPNP 4316
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 3 HPNPDFPN 10
+PNP F N
Sbjct: 39 YPNPKFNN 46
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 NHPNP 6
+HPNP
Sbjct: 4335 DHPNP 4339
Query: 4 PNPDFPN 10
PN +PN
Sbjct: 1916 PNQPYPN 1922
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 3 HPNPD 7
HP PD
Sbjct: 270 HPRPD 274
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 YNHPNP 6
Y+H NP
Sbjct: 2781 YDHENP 2786
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 YNHPNPDFP 9
Y+H +PD P
Sbjct: 771 YSHDDPDTP 779
Query: 1 YNHPNPDFP 9
Y P+P FP
Sbjct: 2094 YFRPDPQFP 2102
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 3 HPNPDFP 9
HP DFP
Sbjct: 321 HPLGDFP 327
>sp|NS1_INCCA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/California/1978)
Query: 3 HPNP 6
HPNP
Sbjct: 150 HPNP 153
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 3 HPNPDFP 9
HP DFP
Sbjct: 321 HPLGDFP 327
>sp|NS1_INCYA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/10/1981)
Query: 3 HPNP 6
HPNP
Sbjct: 145 HPNP 148
>sp|GM_HHV6Z|ENVELOPE glycoprotein M|Human herpesvirus 6B (strain Z29)
Query: 2 NHPNPDFP 9
N PN FP
Sbjct: 36 NFPNLGFP 43
>sp|GM_HHV6U|ENVELOPE glycoprotein M|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 NHPNPDFP 9
N PN FP
Sbjct: 36 NFPNLGFP 43
>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 PNPDF 8
PNP+F
Sbjct: 440 PNPEF 444
>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)
Query: 4 PNPDF 8
PNP+F
Sbjct: 440 PNPEF 444
>sp|NS1_INCHY|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Hyogo/1/1983)
Query: 3 HPNP 6
HPNP
Sbjct: 150 HPNP 153
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 YNHPNP 6
Y+H NP
Sbjct: 2820 YDHNNP 2825
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 YNHPNPDF 8
++H PDF
Sbjct: 105 FDHWTPDF 112
>sp|NS1_INCY6|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/1964)
Query: 3 HPNP 6
HPNP
Sbjct: 150 HPNP 153
>sp|NS1_INCMI|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Mississippi/1980)
Query: 3 HPNP 6
HPNP
Sbjct: 145 HPNP 148
>sp|NS1_INCAA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Ann
Query: 3 HPNP 6
HPNP
Sbjct: 150 HPNP 153
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 NHPNPDF 8
+ PNPD+
Sbjct: 1846 DEPNPDW 1852
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 NHPNPDF 8
+ PNPD+
Sbjct: 1846 DEPNPDW 1852
>sp|V55A_HHV7J|UNCHARACTERIZED protein U55A|Human herpesvirus 7 (strain JI)
Query: 3 HPNPDFP 9
HP DFP
Sbjct: 395 HPMTDFP 401
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 3 HPNPD 7
HP PD
Sbjct: 354 HPGPD 358
>sp|NS1_INCTA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Taylor/1233/1947)
Query: 3 HPNP 6
HPNP
Sbjct: 145 HPNP 148
>sp|NS1_INCJH|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 3 HPNP 6
HPNP
Sbjct: 145 HPNP 148
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 NHPNPDF 8
+ PNPD+
Sbjct: 1846 DEPNPDW 1852
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 HPNPDF 8
HP P++
Sbjct: 4935 HPKPEY 4940
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 NHPNPDF 8
+ PNPD+
Sbjct: 1846 DEPNPDW 1852
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 5 NPDFP 9
NP+FP
Sbjct: 64 NPNFP 68
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 5 NPDFP 9
NP+FP
Sbjct: 63 NPNFP 67
>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24
Query: 3 HPNPDFP 9
HP PD P
Sbjct: 140 HPIPDVP 146
>sp|NCAP_HRSVB|NUCLEOPROTEIN respiratory syncytial virus B
Query: 1 YNHPNPD 7
Y H +PD
Sbjct: 149 YRHDSPD 155
>sp|NCAP_HRSVA|NUCLEOPROTEIN respiratory syncytial virus A
Query: 1 YNHPNPD 7
Y H +PD
Sbjct: 149 YRHDSPD 155
>sp|NCAP_HRSV1|NUCLEOPROTEIN respiratory syncytial virus B
Query: 1 YNHPNPD 7
Y H +PD
Sbjct: 149 YRHDSPD 155
>sp|NCAP_HRSV|NUCLEOPROTEIN respiratory syncytial virus
Query: 1 YNHPNPD 7
Y H +PD
Sbjct: 149 YRHDSPD 155
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 5 NPDFP 9
NP+FP
Sbjct: 63 NPNFP 67
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 5 NPDFP 9
NP+FP
Sbjct: 63 NPNFP 67
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 2 NHPNPDF 8
NHPN ++
Sbjct: 221 NHPNMNY 227
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 2 NHPNPDF 8
N PNP +
Sbjct: 836 NQPNPQW 842
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 2 NHPNPDF 8
N PNP +
Sbjct: 836 NQPNPQW 842
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 NHPNPDF 8
N PNP +
Sbjct: 836 NQPNPQW 842
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 NHPNPDF 8
N PNP +
Sbjct: 836 NQPNPQW 842
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 2 NHPNPDF 8
N PNP +
Sbjct: 836 NQPNPQW 842
>sp|VP22_HHV11|TEGUMENT protein VP22|Human herpesvirus 1 (strain 17)
Query: 4 PNPDFP 9
PNPD P
Sbjct: 183 PNPDAP 188
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 YNHPNPDFPN 10
YN PD+ N
Sbjct: 148 YNEQIPDWVN 157
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 1 YNHPNPDFPN 10
YN PD+ N
Sbjct: 148 YNEQIPDWVN 157
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 3 HPNPDFPN 10
HP D PN
Sbjct: 135 HPISDIPN 142
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YNHPNPDF 8
Y H NP F
Sbjct: 1941 YFHLNPGF 1948
10|Sequence|46|58|PDFPNSPHPYHPR
>sp|X_PAVHV|UNCHARACTERIZED protein X|Human parvovirus B19 (strain HV)
Query: 3 FPNSPHPYHP 12
+ +P PYHP
Sbjct: 4 YLTTPMPYHP 13
>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain
Query: 1 PDFPNSPHPY-HPR 13
P+F N +P+ HPR
Sbjct: 483 PEFENDINPFNHPR 496
>sp|ICP27_HHV6Z|MRNA export factor ICP27 homolog|Human herpesvirus 6B (strain Z29)
Query: 3 FPNSPHPYH 11
FPN PH Y
Sbjct: 374 FPNLPHEYR 382
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 6 SPHPY 10
+PHPY
Sbjct: 2951 TPHPY 2955
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 6 SPHPY 10
+PHPY
Sbjct: 2971 TPHPY 2975
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 6 SPHPY 10
+PHPY
Sbjct: 3001 TPHPY 3005
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 6 SPHPY 10
+PHPY
Sbjct: 2951 TPHPY 2955
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 6 SPHPY 10
+PHPY
Sbjct: 2971 TPHPY 2975
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 6 SPHPY 10
+PHPY
Sbjct: 3001 TPHPY 3005
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 PDFPNSPHPYHPR 13
P PN+ PYH R
Sbjct: 396 PVPPNAYTPYHLR 408
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 PDFPNSPHPYHPR 13
P PN+ PYH R
Sbjct: 398 PVPPNAYTPYHLR 410
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PDFPNSPHP 9
P FP P+P
Sbjct: 443 PQFPCGPNP 451
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 FPNSPHPYHP 12
F + PYHP
Sbjct: 4652 FKHWSMPYHP 4661
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 PNSPHP 9
PN P+P
Sbjct: 1916 PNQPYP 1921
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 PNSPHP 9
PN P+P
Sbjct: 1916 PNQPYP 1921
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 9 PYHP 12
PYHP
Sbjct: 2685 PYHP 2688
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 FPNSPHPY 10
F +S HPY
Sbjct: 2782 FVDSDHPY 2789
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 FPNSPHPYH 11
FP+S P H
Sbjct: 1830 FPDSNAPIH 1838
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 FPNSPHPYH 11
FP+S P H
Sbjct: 1830 FPDSNAPIH 1838
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 FPNSPHPYH 11
FP+S P H
Sbjct: 1830 FPDSNAPIH 1838
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 FPNSPHPYH 11
FP+S P H
Sbjct: 1830 FPDSNAPIH 1838
>sp|PG038_VARV|EARLY protein OPG038|Variola virus
Query: 6 SPHPYHPR 13
+PH HP+
Sbjct: 171 NPHYLHPK 178
>sp|PG038_VAR67|EARLY protein OPG038|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 6 SPHPYHPR 13
+PH HP+
Sbjct: 171 NPHYLHPK 178
>sp|PG038_VACCC|EARLY protein OPG038|Vaccinia virus (strain Copenhagen) (VACV)
Query: 6 SPHPYHPR 13
+PH HP+
Sbjct: 171 NPHYLHPK 178
>sp|PG038_MONPV|EARLY protein OPG038|Monkeypox virus (MPXV)
Query: 6 SPHPYHPR 13
+PH HP+
Sbjct: 171 NPHYLHPK 178
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 PNSPHPYH 11
PNS H Y+
Sbjct: 455 PNSEHEYY 462
>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain
Query: 7 PHPY 10
PHPY
Sbjct: 532 PHPY 535
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 1 PDFPNSPHPYHPR 13
PD P SP H R
Sbjct: 101 PDIPLSPGGTHAR 113
>sp|ORF23_HHV8P|PROTEIN ORF23|Human herpesvirus 8 type P
Query: 6 SPHPYHPR 13
SPHPY R
Sbjct: 79 SPHPYALR 86
Query: 4 PNSPHPYHP 12
P SP P HP
Sbjct: 170 PESPLPRHP 178
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 7 PHPYHPR 13
P PY PR
Sbjct: 98 PPPYSPR 104
>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959
Query: 6 SPHPYHPR 13
SP PY+ R
Sbjct: 166 SPSPYNSR 173
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 PDF-PNSPHPYH 11
P F PNS H Y+
Sbjct: 450 PAFNPNSGHEYY 461
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 7 PHPYHPR 13
P PY PR
Sbjct: 98 PPPYSPR 104
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 4 PNSPHPYH 11
PNS H Y+
Sbjct: 454 PNSGHEYY 461
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DFPNSPHP 9
++PN P P
Sbjct: 229 NYPNLPSP 236
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DFPNSPHP 9
++PN P P
Sbjct: 229 NYPNLPSP 236
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 PDFPNSPHPYHP 12
PD P + HP P
Sbjct: 314 PDTPQAGHPNRP 325
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 1 PDFPNSPHPYHP 12
P FP P HP
Sbjct: 88 PRFPPRPLIRHP 99
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 3 FPNSPHPYHP 12
PN+P P P
Sbjct: 52 LPNTPDPQKP 61
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 3 FPNSPHPYHP 12
PN+P P P
Sbjct: 52 LPNTPDPQKP 61
>sp|LMP2_EBVB9|LATENT membrane protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 7 PHPYHPR 13
P PY PR
Sbjct: 98 PPPYSPR 104
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 3 FPNSPHPYHP 12
PN+P P P
Sbjct: 52 LPNTPDPQKP 61
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 7 PHPY 10
PHPY
Sbjct: 282 PHPY 285
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 FPNSPHP 9
F N PHP
Sbjct: 1795 FRNPPHP 1801
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 FPNSPHP 9
F N PHP
Sbjct: 1795 FRNPPHP 1801
>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)
Query: 1 PDFPNSPHPYHP 12
P ++ PYHP
Sbjct: 322 PSIQDAATPYHP 333
>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)
Query: 1 PDFPNSPHPYHP 12
P ++ PYHP
Sbjct: 322 PSIQDAATPYHP 333
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 7 PHPYHPR 13
P PYH R
Sbjct: 120 PCPYHQR 126
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 7 PHPYHPR 13
P PYH R
Sbjct: 120 PCPYHQR 126
>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)
Query: 1 PDFPNSPHPYHP 12
P ++ PYHP
Sbjct: 322 PSIQDAATPYHP 333
>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)
Query: 1 PDFPNSPHPYHP 12
P ++ PYHP
Sbjct: 322 PSIQDAATPYHP 333
>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)
Query: 1 PDFPNSPHPYHP 12
P ++ PYHP
Sbjct: 321 PSIQDAATPYHP 332
>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)
Query: 1 PDFPNSPHPYHP 12
P ++ PYHP
Sbjct: 322 PSIQDAATPYHP 333
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 3 FPNSPHPY 10
+PN+ HP+
Sbjct: 294 YPNATHPW 301
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 3 FPNSPHPY 10
+PN+ HP+
Sbjct: 295 YPNATHPW 302
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 3 FPNSPHPY 10
+PN+ HP+
Sbjct: 294 YPNASHPW 301
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 3 FPNSPHPY 10
+PN+ HP+
Sbjct: 295 YPNATHPW 302
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 8 HPYHPR 13
HPY PR
Sbjct: 233 HPYRPR 238
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 5 NSPHPYHPR 13
+SPHP R
Sbjct: 174 SSPHPVSNR 182
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 5 NSPHPYHPR 13
+S HP+H R
Sbjct: 1307 SSGHPHHMR 1315
>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)
Query: 2 DFPNSPHPYH 11
D P+ P P H
Sbjct: 627 DMPSGPTPQH 636
>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P
Query: 3 FPNSPHPYHP 12
FP P P P
Sbjct: 162 FPYRPRPTSP 171
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 PDFPNSPHPYHP 12
PD + YHP
Sbjct: 2402 PDLESGSVEYHP 2413
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 2 DFPNSPHPYH 11
D P+ P P H
Sbjct: 625 DMPSGPTPQH 634
THE END