REG1A_HUMAN Blast Output
Viruses
1|Sequence|1|10|MAQTSSYFML

>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)

Query: 2 AQTSSYFML 10
A++S YFML
Sbjct: 328 ARSSGYFML 336


>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)

Query: 2 AQTSSYFML 10
A++S YFML
Sbjct: 328 ARSSGYFML 336




2|Sequence|6|15|SYFMLISCLM

>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P

Query: 1 SYFMLISCL 9
+YFM++ CL
Sbjct: 534 AYFMVLGCL 542


>sp|VF184_IIV6|PUTATIVE helicase 184R|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 YFMLISCLM 10
YFML +C M
Sbjct: 645 YFMLENCEM 653


>sp|CVC2_EHV2|CAPSID vertex component 2|Equine herpesvirus 2 (strain 86/87)

Query: 2 YFMLISCL 9
YF+++ CL
Sbjct: 550 YFLILGCL 557


>sp|CVC2_ALHV1|CAPSID vertex component 2|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 YFMLISCL 9
YF+++ CL
Sbjct: 542 YFLVLGCL 549


>sp|C22L_VACCW|TRUNCATED CrmB protein|Vaccinia virus (strain Western Reserve)

Query: 1 SYFMLISCLM 10
SY + +SC++
Sbjct: 7 SYILFLSCII 16


>sp|C22L_VACCC|TRUNCATED CrmB protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 SYFMLISCLM 10
SY + +SC++
Sbjct: 7 SYILFLSCII 16




3|Sequence|11|20|ISCLMFLSQS

>sp|VG71_GAHVM|UNCHARACTERIZED gene 71 protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 SCLMFLSQS 10
SC+ F+SQ+
Sbjct: 89 SCIHFMSQN 97


>sp|PG209_VACCW|PROTEIN OPG209|Vaccinia virus (strain Western Reserve)

Query: 1 ISCLMFLSQS 10
I+CL+F++ S
Sbjct: 7 IACLIFVTSS 16


>sp|P4_PCVC|UNCHARACTERIZED protein p4|Penicillium chrysogenum virus (isolate Caston/2003)

Query: 1 ISCLMFLSQS 10
+SCLM+ +S
Sbjct: 298 VSCLMYALES 307




4|Sequence|16|25|FLSQSQGQEA

>sp|GLYDT_BPPM6|GLYCINYLTRANSFERASE phage M6

Query: 1 FLSQSQGQE 9
FLS+ +G+E
Sbjct: 62 FLSEKEGEE 70




5|Sequence|21|30|QGQEAQTELP

>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 1 QGQEAQTEL 9
QG+EA TE+
Sbjct: 539 QGEEAATEV 547


>sp|DPOL_EHV1V|DNA polymerase catalytic subunit|Equine herpesvirus 1 (strain V592)

Query: 2 GQEAQTELP 10
GQ A+TE P
Sbjct: 31 GQTAETERP 39


>sp|DPOL_EHV1B|DNA polymerase catalytic subunit|Equine herpesvirus 1 (strain Ab4p)

Query: 2 GQEAQTELP 10
GQ A+TE P
Sbjct: 31 GQTAETERP 39




6|Sequence|26|35|QTELPQARIS

>sp|VBET_BPP4|PROTEIN beta|Enterobacteria phage P4 (Bacteriophage P4)

Query: 1 QTELPQARIS 10
+TE+P+A IS
Sbjct: 188 RTEIPEAIIS 197




7|Sequence|31|40|QARISCPEGT

>sp|P7_PBCV1|MINOR capsid protein P7|Paramecium bursaria Chlorella virus 1

Query: 5 SCPEGT 10
+CPEGT
Sbjct: 119 ACPEGT 124


>sp|RYK_AVIR3|TYROSINE-PROTEIN kinase transforming protein RYK|Avian retrovirus RPL30

Query: 1 QARISCPEGT 10
+ R+S PEGT
Sbjct: 61 EGRLSQPEGT 70


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 6 CPEGT 10
CPEGT
Sbjct: 1177 CPEGT 1181


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 6 CPEGT 10
CPEGT
Sbjct: 1176 CPEGT 1180


>sp|P19_TBSVC|RNA silencing suppressor p19|Tomato bushy stunt virus (strain

Query: 6 CPEGT 10
CPEGT
Sbjct: 160 CPEGT 164


>sp|P19_TBSVK|RNA silencing suppressor p19|Tomato bushy stunt virus (strain

Query: 6 CPEGT 10
CPEGT
Sbjct: 160 CPEGT 164


>sp|P19_TBSVJ|RNA silencing suppressor p19|Tomato bushy stunt virus (strain

Query: 6 CPEGT 10
CPEGT
Sbjct: 160 CPEGT 164




8|Sequence|36|45|CPEGTNAYRS

>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2 PEGTNAYR 9
PEG +AYR
Sbjct: 696 PEGPSAYR 703


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 2 PEGTNAYR 9
PEG +AYR
Sbjct: 696 PEGPSAYR 703


>sp|GP_PHV|ENVELOPMENT polyprotein|Prospect Hill virus (PHV)

Query: 1 CPEGTNAYR 9
CPE T A+R
Sbjct: 890 CPEHTGAFR 898


>sp|P19_TBSVK|RNA silencing suppressor p19|Tomato bushy stunt virus (strain

Query: 1 CPEGTNAY 8
CPEGT +
Sbjct: 160 CPEGTQTF 167


>sp|P19_TBSVJ|RNA silencing suppressor p19|Tomato bushy stunt virus (strain

Query: 1 CPEGTNAY 8
CPEGT +
Sbjct: 160 CPEGTQTF 167


>sp|P19_TBSVC|RNA silencing suppressor p19|Tomato bushy stunt virus (strain

Query: 1 CPEGTNAY 8
CPEGT +
Sbjct: 160 CPEGTETF 167


>sp|POLG_BCMNN|GENOME polyprotein|Bean common mosaic necrosis virus

Query: 1 CPEGTNAYRS 10
CP+ ++YR+
Sbjct: 882 CPKNIHSYRA 891


>sp|MVP_BCMNN|P3N-PIPO polyprotein|Bean common mosaic necrosis virus

Query: 1 CPEGTNAYRS 10
CP+ ++YR+
Sbjct: 882 CPKNIHSYRA 891


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 2 PEGTNAYR 9
PEG ++YR
Sbjct: 695 PEGPSSYR 702


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 2 PEGTNAYR 9
PEG ++YR
Sbjct: 695 PEGPSSYR 702


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 2 PEGTNAYR 9
PEG ++YR
Sbjct: 695 PEGPSSYR 702


>sp|P7_PBCV1|MINOR capsid protein P7|Paramecium bursaria Chlorella virus 1

Query: 1 CPEGTNAYRS 10
CPEGT + S
Sbjct: 120 CPEGTTDWGS 129


>sp|MATRX_ABLVB|MATRIX protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 1 CPEGTN 6
CPEG N
Sbjct: 116 CPEGMN 121


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 2 PEGTNAYR 9
PEG ++YR
Sbjct: 695 PEGPSSYR 702


>sp|POLG_ZYMVS|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 2 PEGTNAY 8
PEGT +Y
Sbjct: 2177 PEGTGSY 2183


>sp|POLG_ZYMVC|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 2 PEGTNAY 8
PEGT +Y
Sbjct: 2174 PEGTGSY 2180


>sp|RDRP_TNVD|RNA-DIRECTED RNA polymerase|Tobacco necrosis virus (strain D)

Query: 1 CPEGTNAYR 9
CP+G YR
Sbjct: 478 CPDGEIRYR 486


>sp|P19_PLV|RNA silencing suppressor p19|Pear latent virus (PeLV)

Query: 2 PEGTNAYR 9
PEGT A++
Sbjct: 161 PEGTEAFK 168


>sp|VNBP_ICRSV|23KDA protein|Indian citrus ringspot virus (isolate

Query: 1 CPEGTNAY 8
CP GT+ Y
Sbjct: 42 CPSGTSPY 49


>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)

Query: 1 CPEGTNAY 8
C +GTN Y
Sbjct: 967 CVDGTNGY 974


>sp|SPIKE_CVBQ|SPIKE glycoprotein|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 CPEGTN 6
CP GTN
Sbjct: 515 CPAGTN 520


>sp|SPIKE_CVBM|SPIKE glycoprotein|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 CPEGTN 6
CP GTN
Sbjct: 515 CPAGTN 520


>sp|SPIKE_CVBV|SPIKE glycoprotein|Bovine coronavirus (strain vaccine) (BCoV)

Query: 1 CPEGTN 6
CP GTN
Sbjct: 515 CPAGTN 520


>sp|SPIKE_CVBLY|SPIKE glycoprotein|Bovine coronavirus (strain LY-138) (BCoV)

Query: 1 CPEGTN 6
CP GTN
Sbjct: 515 CPAGTN 520


>sp|SPIKE_CVBL9|SPIKE glycoprotein|Bovine coronavirus (strain L9) (BCoV)

Query: 1 CPEGTN 6
CP GTN
Sbjct: 515 CPAGTN 520


>sp|SPIKE_CVBF|SPIKE glycoprotein|Bovine coronavirus (strain F15) (BCoV)

Query: 1 CPEGTN 6
CP GTN
Sbjct: 515 CPAGTN 520


>sp|SPIKE_CVBOK|SPIKE glycoprotein|Bovine coronavirus (strain OK-0514) (BCoV)

Query: 1 CPEGTN 6
CP GTN
Sbjct: 515 CPAGTN 520


>sp|SPIKE_CVBLU|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 CPEGTN 6
CP GTN
Sbjct: 515 CPAGTN 520


>sp|SPIKE_CVBEN|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 CPEGTN 6
CP GTN
Sbjct: 515 CPAGTN 520


>sp|SPIKE_CVBLS|SPIKE glycoprotein|Bovine coronavirus (strain LSU-94LSS-051) (BCoV-LSU)

Query: 1 CPEGTN 6
CP GTN
Sbjct: 515 CPAGTN 520




9|Sequence|41|50|NAYRSYCYYF

>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)

Query: 4 RSYCYY 9
RSYCY+
Sbjct: 351 RSYCYH 356


>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 4 RSYCYY 9
RSYCY+
Sbjct: 351 RSYCYH 356


>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 4 RSYCYY 9
RSYCY+
Sbjct: 351 RSYCYH 356


>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 4 RSYCYY 9
RSYCY+
Sbjct: 351 RSYCYH 356


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 4 RSYCYY 9
RSYCY+
Sbjct: 342 RSYCYH 347


>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)

Query: 4 RSYCYY 9
RSYCY+
Sbjct: 279 RSYCYH 284


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 4 RSYCYY 9
RSYCY+
Sbjct: 351 RSYCYH 356


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 4 RSYCYY 9
RSYCY+
Sbjct: 351 RSYCYH 356


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 4 RSYCYY 9
RSYCY+
Sbjct: 351 RSYCYH 356


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 4 RSYCYY 9
RSYCY+
Sbjct: 351 RSYCYH 356


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 AYRSYCYYF 10
+ SYCY F
Sbjct: 3277 GFDSYCYVF 3285


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 AYRSYCYYF 10
+ SYCY F
Sbjct: 3294 GFDSYCYVF 3302


>sp|CAPSH_ASFM2|HEXON protein p72|African swine fever virus (isolate

Query: 1 NAYRSYCYY 9
NAYR+ YY
Sbjct: 171 NAYRNLVYY 179


>sp|CAPSH_ASFK5|MAJOR capsid protein|African swine fever virus (isolate

Query: 1 NAYRSYCYY 9
NAYR+ YY
Sbjct: 171 NAYRNLVYY 179


>sp|CAPSH_ASFB7|HEXON protein p72|African swine fever virus (strain

Query: 1 NAYRSYCYY 9
NAYR+ YY
Sbjct: 171 NAYRNLVYY 179


>sp|CAPSH_ASFWA|MAJOR capsid protein|African swine fever virus (isolate

Query: 1 NAYRSYCYY 9
NAYR+ YY
Sbjct: 171 NAYRNLVYY 179


>sp|P2_RGDV|MINOR outer capsid protein P2|Rice gall dwarf virus (RGDV)

Query: 1 NAYRSYCYY 9
NA+ S+C Y
Sbjct: 834 NAFHSWCQY 842


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 4 RSYCY 8
RSYCY
Sbjct: 347 RSYCY 351


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 4 RSYCY 8
RSYCY
Sbjct: 347 RSYCY 351


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 4 RSYCY 8
RSYCY
Sbjct: 347 RSYCY 351


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 4 RSYCY 8
RSYCY
Sbjct: 347 RSYCY 351


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 4 RSYCY 8
RSYCY
Sbjct: 347 RSYCY 351


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 4 RSYCY 8
RSYCY
Sbjct: 350 RSYCY 354


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 4 RSYCY 8
RSYCY
Sbjct: 344 RSYCY 348


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 4 RSYCY 8
RSYCY
Sbjct: 347 RSYCY 351


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 4 RSYCY 8
RSYCY
Sbjct: 342 RSYCY 346


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 2 AYRSYCY 8
A R+YCY
Sbjct: 347 AVRAYCY 353


>sp|RDRP_WCMVM|RNA replication protein|White clover mosaic virus (strain

Query: 1 NAYRSYCYYF 10
N Y+ +C Y+
Sbjct: 688 NTYQPFCRYY 697


>sp|MVP_RRSVT|MOVEMENT and RNA silencing protein|Rice ragged stunt virus (isolate

Query: 1 NAYRSYCY 8
+A +SYCY
Sbjct: 567 HATKSYCY 574


>sp|L_SFTS|RNA-DIRECTED RNA polymerase L|Dabie bandavirus (Severe fever with

Query: 4 RSYCYYF 10
R Y YYF
Sbjct: 1304 RKYAYYF 1310


>sp|Y093_OSHVF|UNCHARACTERIZED protein ORF93|Ostreid herpesvirus 1 (isolate France)

Query: 3 YRSYCYY 9
Y SYC Y
Sbjct: 26 YNSYCNY 32


>sp|PG061_VACCP|PROTEIN OPG061|Vaccinia virus (strain L-IVP) (VACV)

Query: 2 AYRSYCYYF 10
AYR +C Y
Sbjct: 23 AYRHHCNYL 31


>sp|P2_RDVF|MINOR outer capsid protein P2|Rice dwarf virus (isolate Fujian)

Query: 1 NAYRSYCYY 9
NA+ S+C Y
Sbjct: 833 NAFMSWCQY 841


>sp|P2_RDVO|MINOR outer capsid protein P2|Rice dwarf virus (isolate O)

Query: 1 NAYRSYCYY 9
NA+ S+C Y
Sbjct: 833 NAFMSWCQY 841


>sp|EXON_IIV6|PUTATIVE exonuclease 012L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 NAYRSYCYY 9
N+Y +YC Y
Sbjct: 222 NSYYTYCIY 230


>sp|YR290_MIMIV|PUTATIVE ATP-dependent RNA helicase R290|Acanthamoeba polyphaga mimivirus

Query: 4 RSYCYYF 10
+SYCY F
Sbjct: 338 KSYCYAF 344


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)

Query: 1 NAYRSYC 7
NAY S+C
Sbjct: 1694 NAYPSFC 1700


>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)

Query: 3 YRSYCYYF 10
Y+S CY F
Sbjct: 623 YKSRCYIF 630


>sp|5054R_ASFB7|PROTEIN MGF 505-4R|African swine fever virus (strain

Query: 1 NAYRSYCY 8
N Y SYC+
Sbjct: 356 NYYYSYCF 363




10|Sequence|46|55|YCYYFNEDRE

>sp|L_SFTS|RNA-DIRECTED RNA polymerase L|Dabie bandavirus (Severe fever with

Query: 1 YCYYFNE 7
Y YYFNE
Sbjct: 1306 YAYYFNE 1312


>sp|VIF_HV1YB|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 YCYYFN 6
+CYYFN
Sbjct: 108 HCYYFN 113


>sp|EP153_ASFP4|LECTIN-LIKE protein EP153R|African swine fever virus (isolate

Query: 2 CYYFNEDRE 10
CYYFN D +
Sbjct: 77 CYYFNNDSK 85


>sp|RDRP_AQRVG|RNA-DIRECTED RNA polymerase VP2|Aquareovirus G (isolate American grass

Query: 2 CYYFNEDR 9
CY N+DR
Sbjct: 73 CYRINQDR 80


>sp|V239_FOWPN|PUTATIVE C-type lectin protein FPV239|Fowlpox virus (strain NVSL) (FPV)

Query: 2 CYYFNEDR 9
CY+F+E++
Sbjct: 59 CYFFSEEK 66


>sp|RDRP_DXV96|RNA-DIRECTED RNA polymerase|Drosophila x virus (isolate Chung/1996)

Query: 1 YCYYFNED 8
Y YY NED
Sbjct: 427 YIYYPNED 434


>sp|L_NDVB1|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Chicken/United

Query: 1 YCYYFN 6
+CYY N
Sbjct: 865 FCYYLN 870


>sp|L_NDVB|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Beaudette

Query: 1 YCYYFN 6
+CYY N
Sbjct: 865 FCYYLN 870


>sp|CAPSD_MUMIP|CAPSID protein VP1|Murine minute virus (strain MVM

Query: 1 YCYYFNEDRE 10
Y YYF DR+
Sbjct: 353 YRYYFCVDRD 362


>sp|CP81_BP186|UNCHARACTERIZED exonuclease CP81|Escherichia phage 186 (Bacteriophage 186)

Query: 1 YCYYFNE 7
+CY+ NE
Sbjct: 123 FCYFLNE 129


>sp|CAPSD_MUMIM|CAPSID protein VP1|Murine minute virus (strain MVMi)

Query: 1 YCYYFNEDRE 10
Y YYF DR+
Sbjct: 353 YRYYFCVDRD 362


>sp|VE1_BPV5|REPLICATION protein E1|Bovine papillomavirus type 5

Query: 2 CYYFNE 7
C+YFN+
Sbjct: 560 CFYFND 565


>sp|MTBS_BPSPR|ORPHAN methyltransferase M.SPRI|Bacillus phage SPR (Bacteriophage SPR)

Query: 3 YYFNEDR 9
YY NED+
Sbjct: 229 YYLNEDK 235


>sp|CAPSD_PAVL3|CAPSID protein VP1|Parvovirus LuIII

Query: 1 YCYYFNEDR 9
Y YYF+ DR
Sbjct: 353 YRYYFSCDR 361


>sp|US9_SUHVR|ENVELOPE protein US9 homolog|Suid herpesvirus 1 (strain Rice)

Query: 2 CYYFNEDRE 10
CYY D E
Sbjct: 48 CYYSESDNE 56


>sp|US9_EHV4|ENVELOPE protein US9 homolog|Equine herpesvirus 4 (strain 1942)

Query: 2 CYYFNEDRE 10
CYY D E
Sbjct: 161 CYYSESDNE 169


>sp|US9_EHV1V|ENVELOPE protein US9 homolog|Equine herpesvirus 1 (strain V592)

Query: 2 CYYFNEDRE 10
CYY D E
Sbjct: 160 CYYSESDNE 168


>sp|US9_EHV1K|ENVELOPE protein US9 homolog|Equine herpesvirus 1 (strain Kentucky

Query: 2 CYYFNEDRE 10
CYY D E
Sbjct: 160 CYYSESDNE 168


>sp|US9_EHV1B|ENVELOPE protein US9 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 2 CYYFNEDRE 10
CYY D E
Sbjct: 160 CYYSESDNE 168


>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 4 YFNEDRE 10
+F+EDRE
Sbjct: 204 FFSEDRE 210


>sp|Y119_NPVOP|UNCHARACTERIZED 59.0 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 3 YYFNEDRE 10
++FN DRE
Sbjct: 489 FFFNNDRE 496


>sp|SSDNA_BPT5|PROBABLE ssDNA-binding protein|Escherichia phage T5 (Enterobacteria phage

Query: 2 CYYFNEDRE 10
C FN D+E
Sbjct: 54 CLRFNRDKE 62


>sp|P14_PBCV1|MINOR capsid protein P14|Paramecium bursaria Chlorella virus 1

Query: 2 CYYFNEDRE 10
CY +N D+E
Sbjct: 101 CYQYNIDKE 109


>sp|VP1_RRSVT|STRUCTURAL protein VP1|Rice ragged stunt virus (isolate

Query: 1 YCYYFNED 8
Y YY N+D
Sbjct: 89 YSYYGNDD 96


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 2 CYYFNED 8
CY +N+D
Sbjct: 936 CYVYNQD 942


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 2 CYYFNED 8
CY +N+D
Sbjct: 936 CYVYNQD 942


>sp|YR625_MIMIV|UNCHARACTERIZED protein R625|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 YFNEDRE 10
YFNED E
Sbjct: 179 YFNEDEE 185


>sp|DPOL_NPVLD|DNA polymerase|Lymantria dispar multicapsid nuclear polyhedrosis

Query: 1 YCYYFNEDR 9
YCY NE R
Sbjct: 748 YCYLNNEQR 756


>sp|RDRP_FDVS|RNA-DIRECTED RNA polymerase VP1|Fiji disease virus (isolate Sugarcane)

Query: 3 YYFNEDRE 10
Y+F ED+E
Sbjct: 766 YFFAEDKE 773




11|Sequence|51|60|NEDRETWVDA

>sp|L_CPXVB|RNA-DIRECTED RNA polymerase L|Cupixi mammarenavirus (isolate Rat/Brasil/BeAn

Query: 1 NEDRETWVDA 10
N+D + WVD
Sbjct: 1463 NQDVKDWVDG 1472


>sp|GLYCO_TUPVT|GLYCOPROTEIN virus (isolate Tupaia/Thailand/-/1986) (TUPV)

Query: 2 EDRETWVD 9
E++ETWV+
Sbjct: 270 EEKETWVN 277


>sp|RPOL_BPKMV|DNA-DIRECTED RNA polymerase|Pseudomonas phage phiKMV

Query: 2 EDRETWVD 9
+DR WVD
Sbjct: 452 DDRAAWVD 459


>sp|DPOL_FRG3G|PUTATIVE DNA polymerase 060R|Frog virus 3 (isolate Goorha)

Query: 2 EDRETWVD 9
EDR+ W D
Sbjct: 798 EDRDPWAD 805


>sp|VS48_TBRVL|SATELLITE RNA 48 kDa protein|Tomato black ring virus (strain

Query: 2 EDRETWV 8
E RETWV
Sbjct: 369 ELRETWV 375


>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 1 NEDRETWVD 9
NE+R TW +
Sbjct: 2729 NENRGTWFE 2737


>sp|VS48_BRSV|SATELLITE RNA 48 kDa protein|Beet ringspot virus (BRSV) (Tomato

Query: 2 EDRETWV 8
E RETWV
Sbjct: 369 ELRETWV 375


>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)

Query: 3 DRETWVDA 10
+++TW+DA
Sbjct: 284 NKDTWLDA 291


>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)

Query: 3 DRETWVDA 10
+++TW+DA
Sbjct: 284 NKDTWLDA 291


>sp|ICP27_EBVG|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 DRETWVDA 10
+++TW+DA
Sbjct: 284 NKDTWLDA 291


>sp|ENV_MLVRK|ENVELOPE glycoprotein|Radiation murine leukemia virus (strain

Query: 1 NEDRET 6
NEDRET
Sbjct: 50 NEDRET 55


>sp|ENV_MLVRD|ENVELOPE glycoprotein|Radiation murine leukemia virus

Query: 1 NEDRET 6
NEDRET
Sbjct: 50 NEDRET 55


>sp|Y306_SIRV1|UNCHARACTERIZED protein 306|Sulfolobus islandicus rod-shaped virus 1

Query: 5 ETWVDA 10
ETWVD+
Sbjct: 36 ETWVDS 41


>sp|RIR1_IIV3|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 DRETWVD 9
DR+ W+D
Sbjct: 557 DRQKWID 563




12|Sequence|56|65|TWVDADLYCQ

>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 3 VDADLYCQ 10
V ADLYCQ
Sbjct: 1614 VLADLYCQ 1621


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 3 VDADLYCQ 10
V ADLYCQ
Sbjct: 1614 VLADLYCQ 1621


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 3 VDADLYCQ 10
V ADLYCQ
Sbjct: 1614 VLADLYCQ 1621


>sp|YL389_MIMIV|UNCHARACTERIZED protein L389|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 DADLYCQ 10
DA++YCQ
Sbjct: 681 DANIYCQ 687


>sp|ENV_SIVVT|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet

Query: 2 WVDADLYCQ 10
W DA++YC+
Sbjct: 186 WNDAEIYCK 194


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 2 WVDADLYC 9
W DA +YC
Sbjct: 2092 WSDARVYC 2099


>sp|ENV_SIVM1|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate Mm142-83)

Query: 1 TWVDADLYCQ 10
TW ADL C+
Sbjct: 189 TWYSADLVCE 198


>sp|ADPRM_MIMIV|PUTATIVE ADP-ribosyl glycohydrolase L543|Acanthamoeba polyphaga mimivirus

Query: 2 WVDADLYCQ 10
W+D+ L CQ
Sbjct: 301 WIDSVLNCQ 309


>sp|NRAM_I61A0|NEURAMINIDASE A virus (strain A/Tern/South

Query: 2 WVDADLYC 9
+VD D+YC
Sbjct: 283 YVDTDVYC 290


>sp|EV168_ASFP4|ENVELOPE protein 168|African swine fever virus (isolate

Query: 1 TWVDADLYCQ 10
TW D YCQ
Sbjct: 110 TWSKEDEYCQ 119


>sp|VPN2_BPPHE|PUTATIVE major capsid protein|Enterococcus phage phiEF24C (Enterococcus

Query: 1 TWVDADL 7
TW D DL
Sbjct: 52 TWADGDL 58


>sp|EV166_ASFWA|ENVELOPE protein 166|African swine fever virus (isolate

Query: 1 TWVDADLYCQ 10
TW D YCQ
Sbjct: 110 TWSKEDEYCQ 119


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 2 WVDADLYC 9
W DA YC
Sbjct: 2098 WSDARTYC 2105


>sp|NRAM_I71A2|NEURAMINIDASE A virus (strain A/Turkey/Oregon/1971

Query: 2 WVDADLYC 9
+VD D+YC
Sbjct: 283 YVDIDVYC 290


>sp|VF378_IIV3|UNCHARACTERIZED protein 100L|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 VDADLYC 9
VDA +YC
Sbjct: 149 VDAKIYC 155


>sp|CAPSD_AAV2S|CAPSID protein VP1|Adeno-associated virus 2 (isolate Srivastava/1982)

Query: 2 WVDADLYCQ 10
W D D+Y Q
Sbjct: 606 WQDRDVYLQ 614


>sp|CAPSD_BPP21|MAJOR capsid protein|Enterobacteria phage P21 (Bacteriophage 21)

Query: 4 DADLYC 9
D DLYC
Sbjct: 183 DIDLYC 188


>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote

Query: 3 VDADLYCQ 10
+D D+YC+
Sbjct: 2839 LDGDVYCK 2846


>sp|DPOL_ICHVA|DNA polymerase|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 WVDADLY 8
W+D DL+
Sbjct: 107 WMDCDLF 113


>sp|FUS_NDVU|FUSION glycoprotein F0|Newcastle disease virus (strain Chicken/Northern

Query: 4 DADLYC 9
D DLYC
Sbjct: 342 DLDLYC 347


>sp|FUS_NDVTG|FUSION glycoprotein F0|Newcastle disease virus (strain Chicken/United

Query: 4 DADLYC 9
D DLYC
Sbjct: 342 DLDLYC 347


>sp|FUS_NDVT|FUSION glycoprotein F0|Newcastle disease virus (strain Texas)

Query: 4 DADLYC 9
D DLYC
Sbjct: 342 DLDLYC 347


>sp|FUS_NDVM|FUSION glycoprotein F0|Newcastle disease virus (strain Miyadera/51)

Query: 4 DADLYC 9
D DLYC
Sbjct: 342 DLDLYC 347


>sp|FUS_NDVL|FUSION glycoprotein F0|Newcastle disease virus (strain Chicken/United

Query: 4 DADLYC 9
D DLYC
Sbjct: 342 DLDLYC 347


>sp|FUS_NDVI|FUSION glycoprotein F0|Newcastle disease virus (strain Italien/45)

Query: 4 DADLYC 9
D DLYC
Sbjct: 342 DLDLYC 347


>sp|FUS_NDVH4|FUSION glycoprotein F0|Newcastle disease virus (strain B1-Hitchner/47)

Query: 4 DADLYC 9
D DLYC
Sbjct: 342 DLDLYC 347


>sp|FUS_NDVH3|FUSION glycoprotein F0|Newcastle disease virus (strain Her/33)

Query: 4 DADLYC 9
D DLYC
Sbjct: 342 DLDLYC 347


>sp|FUS_NDVD|FUSION glycoprotein F0|Newcastle disease virus (strain D26/76)

Query: 4 DADLYC 9
D DLYC
Sbjct: 342 DLDLYC 347


>sp|FUS_NDVB1|FUSION glycoprotein F0|Newcastle disease virus (strain Chicken/United

Query: 4 DADLYC 9
D DLYC
Sbjct: 342 DLDLYC 347


>sp|FUS_NDVB|FUSION glycoprotein F0|Newcastle disease virus (strain Beaudette

Query: 4 DADLYC 9
D DLYC
Sbjct: 342 DLDLYC 347


>sp|FUS_NDVA|FUSION glycoprotein F0|Newcastle disease virus (strain

Query: 4 DADLYC 9
D DLYC
Sbjct: 342 DLDLYC 347


>sp|VPHE_NPVOP|POLYHEDRAL envelope protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 2 WVDADLYCQ 10
W+DAD Q
Sbjct: 16 WIDADYIYQ 24


>sp|ENV_SIVV1|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet

Query: 2 WVDADLYCQ 10
W DA+++C+
Sbjct: 186 WNDAEIFCK 194


>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)

Query: 1 TWVDADLY 8
TW AD+Y
Sbjct: 939 TWRSADVY 946


>sp|RDRP_TOBSV|RNA-DIRECTED RNA polymerase 2a|Tobacco streak virus (strain WC)

Query: 2 WVDADL 7
WVDA+L
Sbjct: 174 WVDAEL 179


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 3 VDADLYC 9
VDA+L+C
Sbjct: 2231 VDANLFC 2237


>sp|L_LNYV3|RNA-DIRECTED RNA polymerase L|Lettuce necrotic yellows virus (isolate

Query: 1 TWVDADLY 8
TW+ DL+
Sbjct: 733 TWISEDLF 740


>sp|REP_BPPHM|REPLICATION-ASSOCIATED protein VP4|Bdellovibrio phage phiMH2K (Bacteriophage phiMH2K)

Query: 2 WVDADLYCQ 10
W+D DL+ +
Sbjct: 82 WIDFDLFIK 90




13|Sequence|61|70|DLYCQNMNSG

>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52

Query: 1 DLYCQNMNSG 10
DLY Q NSG
Sbjct: 303 DLYIQGSNSG 312


>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)

Query: 2 LYCQNMNS 9
L+C NMNS
Sbjct: 168 LWCINMNS 175


>sp|MATRX_MOKV|MATRIX protein|Mokola virus (MOKV)

Query: 2 LYCQNMNS 9
L+C NMNS
Sbjct: 168 LWCINMNS 175


>sp|MATRX_IRKV|MATRIX protein|Irkut virus (IRKV)

Query: 2 LYCQNMNS 9
L+C NMNS
Sbjct: 168 LWCINMNS 175


>sp|UL87_SHV21|GENE 24 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 2 LYCQNMNSG 10
YC+NM +G
Sbjct: 465 FYCENMCNG 473


>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote

Query: 1 DLYCQNMNS 9
DLYC N+ +
Sbjct: 378 DLYCNNLQN 386


>sp|MCP_ALHV1|MAJOR capsid protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 LYCQNMNS 9
+YCQN+ S
Sbjct: 1109 IYCQNLFS 1116


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 1 DLYCQ 5
DLYCQ
Sbjct: 1617 DLYCQ 1621


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1 DLYCQ 5
DLYCQ
Sbjct: 1617 DLYCQ 1621


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1 DLYCQ 5
DLYCQ
Sbjct: 1617 DLYCQ 1621


>sp|MATRX_EBLV1|MATRIX protein|European bat lyssavirus 1 (strain

Query: 2 LYCQNMNS 9
L+C NMNS
Sbjct: 168 LWCINMNS 175


>sp|MATRX_RABVB|MATRIX protein|Rabies virus (strain silver-haired bat-associated)

Query: 2 LYCQNMNS 9
++C NMNS
Sbjct: 168 IWCINMNS 175


>sp|YR158_MIMIV|UNCHARACTERIZED protein R158|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DLYCQNM 7
D++CQN+
Sbjct: 264 DIFCQNL 270


>sp|MATRX_RABVP|MATRIX protein|Rabies virus (strain Pasteur vaccins

Query: 2 LYCQNMNS 9
++C NMNS
Sbjct: 168 IWCINMNS 175


>sp|DPOL_MIMIV|DNA polymerase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 CQNMN 8
CQNMN
Sbjct: 1718 CQNMN 1722


>sp|MATRX_EBLV2|MATRIX protein|European bat lyssavirus 2 (strain

Query: 2 LYCQNMNS 9
++C NMNS
Sbjct: 168 IWCINMNS 175


>sp|MATRX_ABLVH|MATRIX protein|Australian bat lyssavirus (isolate Human/AUS/1998)

Query: 2 LYCQNMNS 9
++C NMNS
Sbjct: 168 IWCINMNS 175


>sp|YL796_MIMIV|UNCHARACTERIZED protein L796|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DLYCQNMNSG 10
D YC N G
Sbjct: 89 DFYCGKFNKG 98


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 DLYCQ 5
DLYCQ
Sbjct: 6183 DLYCQ 6187




14|Sequence|66|75|NMNSGNLVSV

>sp|UDPE_NPVLD|ECDYSTEROID UDP-glucosyltransferase|Lymantria dispar multicapsid nuclear

Query: 1 NMNSGNLVSV 10
N N+GNL ++
Sbjct: 62 NRNAGNLTTI 71




15|Sequence|71|80|NLVSVLTQAE

>sp|NCAP_TSWVS|NUCLEOPROTEIN spotted wilt virus (strain

Query: 1 NLVSVLTQAE 10
N+VS+LTQ+E
Sbjct: 10 NIVSLLTQSE 19


>sp|NCAP_TSWV3|NUCLEOPROTEIN spotted wilt virus (strain

Query: 1 NLVSVLTQA 9
N++S+LTQA
Sbjct: 10 NIISLLTQA 18




16|Sequence|76|85|LTQAEGAFVA

***** No hits found ******


17|Sequence|81|90|GAFVASLIKE

***** No hits found ******


18|Sequence|86|95|SLIKESGTDD

>sp|YL179_MIMIV|UNCHARACTERIZED protein L179|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 SLIKESGTDD 10
SLI E G DD
Sbjct: 280 SLIDEGGVDD 289




19|Sequence|91|100|SGTDDFNVWI

>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 TDDFNVW 9
TDDFN+W
Sbjct: 90 TDDFNIW 96


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 SGTDDFNVW 9
T+DFNVW
Sbjct: 3559 CSTEDFNVW 3567


>sp|POLG_RGMVD|GENOME polyprotein|Ryegrass mosaic virus (isolate Denmark/Danish)

Query: 4 DDFNVWI 10
DD NVWI
Sbjct: 1066 DDTNVWI 1072


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 1 SGTDDFNVW 9
T+DFNVW
Sbjct: 3559 CSTEDFNVW 3567


>sp|GT313_AFV1Y|PUTATIVE glycosyltransferase ORF313|Acidianus filamentous virus 1 (isolate

Query: 2 GTDDFNVW 9
G D+NVW
Sbjct: 255 GDKDYNVW 262


>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 TDDFNVW 9
T+DFN+W
Sbjct: 89 TEDFNMW 95


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 4 DDFNVW 9
+DFNVW
Sbjct: 3474 EDFNVW 3479


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 4 DDFNVW 9
+DFNVW
Sbjct: 3474 EDFNVW 3479


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 4 DDFNVW 9
+DFNVW
Sbjct: 3474 EDFNVW 3479


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 4 DDFNVW 9
+DFNVW
Sbjct: 3474 EDFNVW 3479


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 4 DDFNVW 9
+DFNVW
Sbjct: 3474 EDFNVW 3479


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 4 DDFNVW 9
+DFNVW
Sbjct: 3474 EDFNVW 3479


>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 4 DDFNVW 9
+DFNVW
Sbjct: 3474 EDFNVW 3479


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 4 DDFNVW 9
+DFNVW
Sbjct: 3474 EDFNVW 3479


>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 4 DDFNVW 9
+DFNVW
Sbjct: 3474 EDFNVW 3479


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 4 DDFNVW 9
+DFNVW
Sbjct: 3474 EDFNVW 3479


>sp|053R_FRG3G|PUTATIVE myristoylated protein 053R|Frog virus 3 (isolate Goorha)

Query: 5 DFNVWI 10
DFNVW+
Sbjct: 450 DFNVWV 455


>sp|IL10H_HCMVM|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain Merlin)

Query: 4 DDFNVWI 10
DD++VW+
Sbjct: 65 DDYSVWL 71


>sp|IL10H_HCMVA|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain AD169)

Query: 4 DDFNVWI 10
DD++VW+
Sbjct: 64 DDYSVWL 70


>sp|POLG_PRSVH|GENOME polyprotein|Papaya ringspot virus (strain P

Query: 4 DDFNVW 9
DDFN W
Sbjct: 2724 DDFNNW 2729


>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 GTDDFNVWI 10
G D+F W+
Sbjct: 462 GADEFEAWL 470


>sp|RIR1_BPT4|RIBONUCLEOSIDE-DIPHOSPHATE reductase subunit alpha|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 SGTDDFNV 8
SGTDD+ +
Sbjct: 734 SGTDDYEI 741


>sp|RDRP_CLBVS|RNA replication polyprotein|Citrus leaf blotch virus (isolate

Query: 4 DDFNVWI 10
DD N W+
Sbjct: 1726 DDLNAWV 1732


>sp|VNS3_JDNVP|PUTATIVE non-structural protein NS3|Junonia coenia densovirus (isolate

Query: 3 TDDFNVW 9
TD+FN W
Sbjct: 78 TDEFNAW 84


>sp|VF295_IIV3|UNCHARACTERIZED protein 016R|Invertebrate iridescent virus 3 (IIV-3)

Query: 5 DFNVWI 10
DFN WI
Sbjct: 221 DFNPWI 226


>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 TDDFNVW 9
TD+F++W
Sbjct: 91 TDNFDIW 97


>sp|TRM2_EHV1B|TRIPARTITE terminase subunit 2|Equine herpesvirus 1 (strain Ab4p)

Query: 2 GTDDFNVW 9
G DF+VW
Sbjct: 79 GHHDFSVW 86


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 4 DDFNVW 9
+DFNVW
Sbjct: 3512 EDFNVW 3517


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 4 DDFNVW 9
+DFNVW
Sbjct: 3512 EDFNVW 3517


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 4 DDFNVW 9
+DFNVW
Sbjct: 3532 EDFNVW 3537


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 4 DDFNVW 9
+DFNVW
Sbjct: 3532 EDFNVW 3537


>sp|VG56_ICHVA|UNCHARACTERIZED protein ORF56|Ictalurid herpesvirus 1 (strain Auburn)

Query: 5 DFNVWI 10
DF++WI
Sbjct: 238 DFSIWI 243


>sp|DARB_BPP1|DEFENSE against restriction protein B|Escherichia phage P1 (Bacteriophage

Query: 4 DDFNVWI 10
D FN WI
Sbjct: 786 DQFNKWI 792


>sp|POLG_PRSVP|GENOME polyprotein|Papaya ringspot virus (strain P

Query: 4 DDFNVW 9
DDFN W
Sbjct: 55 DDFNNW 60


>sp|POLG_PRSVW|GENOME polyprotein|Papaya ringspot virus (strain W)

Query: 4 DDFNVW 9
DDFN W
Sbjct: 55 DDFNNW 60


>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 4 DDFNVW 9
++FNVW
Sbjct: 3564 EEFNVW 3569


>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)

Query: 4 DDFNVW 9
++FNVW
Sbjct: 3561 EEFNVW 3566


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 4 DDFNVW 9
++FNVW
Sbjct: 3564 EEFNVW 3569


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 4 DDFNVW 9
++FNVW
Sbjct: 3561 EEFNVW 3566


>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)

Query: 4 DDFNVW 9
++FNVW
Sbjct: 3507 EEFNVW 3512


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 4 DDFNVW 9
++FNVW
Sbjct: 3507 EEFNVW 3512




20|Sequence|96|105|FNVWIGLHDP

>sp|PB2_QRFVE|POLYMERASE basic protein 2|Quaranfil virus (isolate

Query: 4 WIGLHDP 10
W+GL+DP
Sbjct: 674 WVGLNDP 680


>sp|VF118_IIV6|PUTATIVE myristoylated protein 118L|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 NVWIGLHDP 10
++W+ HDP
Sbjct: 423 DIWVDYHDP 431


>sp|DARB_BPP1|DEFENSE against restriction protein B|Escherichia phage P1 (Bacteriophage

Query: 1 FNVWIGLHD 9
FN WI HD
Sbjct: 788 FNKWIKTHD 796


>sp|NSP_CLVN|NUCLEAR shuttle protein|African cassava mosaic virus (isolate

Query: 1 FNVWIGLHD 9
+N+W HD
Sbjct: 204 YNIWASFHD 212


>sp|SIEB_BPP22|SUPERINFECTION exclusion protein B|Salmonella phage P22 (Bacteriophage P22)

Query: 4 WIGLHDP 10
WI LH+P
Sbjct: 43 WINLHNP 49


>sp|YR338_MIMIV|UNCHARACTERIZED protein R338|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FNVWIGLHDP 10
F +IG HDP
Sbjct: 749 FKYFIGSHDP 758


>sp|PP62_ASFK5|POLYPROTEIN pp62|African swine fever virus (isolate

Query: 2 NVWIGLHDP 10
+VW+ HDP
Sbjct: 12 SVWLQQHDP 20


>sp|PP62_ASFWA|POLYPROTEIN pp62|African swine fever virus (isolate

Query: 2 NVWIGLHDP 10
+VW+ HDP
Sbjct: 12 SVWLQQHDP 20


>sp|PP62_ASFP4|POLYPROTEIN pp62|African swine fever virus (isolate

Query: 2 NVWIGLHDP 10
+VW+ HDP
Sbjct: 12 SVWLQQHDP 20


>sp|PP62_ASFB7|POLYPROTEIN pp62|African swine fever virus (strain

Query: 2 NVWIGLHDP 10
+VW+ HDP
Sbjct: 12 SVWLQQHDP 20


>sp|PP62_ASFM2|POLYPROTEIN pp62|African swine fever virus (isolate

Query: 2 NVWIGLHDP 10
+VW+ HDP
Sbjct: 12 SVWLQQHDP 20


>sp|NSP_PYMVV|NUCLEAR shuttle protein|Potato yellow mosaic virus (isolate

Query: 1 FNVWIGLHD 9
FN W G D
Sbjct: 204 FNCWAGFKD 212


>sp|YR563_MIMIV|PUTATIVE ATP-dependent RNA helicase R563|Acanthamoeba polyphaga mimivirus

Query: 1 FNVWIGLHDP 10
F +W G DP
Sbjct: 423 FAIWSGDQDP 432


>sp|LEF11_NPVST|LATE expression factor 11|Spodoptera litura multicapsid

Query: 2 NVWIGLHD 9
NVW +HD
Sbjct: 34 NVWAHVHD 41


>sp|YR505_MIMIV|UNCHARACTERIZED protein R505|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FNVWIGLHDP 10
+N W+ DP
Sbjct: 46 WNAWLNYQDP 55


>sp|VP5_FDVS|UNCHARACTERIZED protein VP5|Fiji disease virus (isolate Sugarcane)

Query: 1 FNVWIG 6
F+VWIG
Sbjct: 887 FHVWIG 892


>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40

Query: 4 WIGLHDP 10
W+G DP
Sbjct: 284 WLGTQDP 290


>sp|P1_PLRV1|PROTEIN P1|Potato leafroll virus (strain Potato/Scotland/strain

Query: 2 NVWIGLH 8
N+W GL+
Sbjct: 131 NIWFGLY 137


>sp|RDRP_PLRV1|PROTEIN P1-P2|Potato leafroll virus (strain Potato/Scotland/strain

Query: 2 NVWIGLH 8
N+W GL+
Sbjct: 131 NIWFGLY 137


>sp|L_MPV15|RNA-DIRECTED RNA polymerase L|Murine pneumonia virus (strain 15)

Query: 1 FNVWIGLHD 9
+N+W+ L++
Sbjct: 158 YNIWVNLNN 166


>sp|DPOL_DHBV1|PROTEIN P|Duck hepatitis B virus (strain

Query: 2 NVWIGLHD 9
N WIGL D
Sbjct: 7 NHWIGLGD 14


>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41

Query: 4 WIGLHDP 10
W+ HDP
Sbjct: 286 WLDSHDP 292


>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1

Query: 4 WIGLHDP 10
W G HDP
Sbjct: 333 WNGDHDP 339




21|Sequence|101|110|GLHDPKKNRR

>sp|YR706_MIMIV|UNCHARACTERIZED protein R706|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 HDPKKNR 9
+DPKKNR
Sbjct: 120 YDPKKNR 126


>sp|VF244_IIV6|PUTATIVE phosphoesterase 244L|Invertebrate iridescent virus 6 (IIV-6)

Query: 4 DPKKNRR 10
DPKKN R
Sbjct: 255 DPKKNER 261


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 2 LHDPKKNRR 10
L DPK+N +
Sbjct: 932 LQDPKRNEK 940


>sp|Y065_SIFVH|UNCHARACTERIZED protein 65|Sulfolobus islandicus filamentous virus (isolate

Query: 1 GLHDPKKNR 9
G+HD KNR
Sbjct: 122 GIHDWTKNR 130


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 3 HDPKKN 8
HDP KN
Sbjct: 6342 HDPSKN 6347


>sp|L_NDVB1|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Chicken/United

Query: 3 HDPKK-NRR 10
HDPK NRR
Sbjct: 624 HDPKSKNRR 632


>sp|L_NDVB|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Beaudette

Query: 3 HDPKK-NRR 10
HDPK NRR
Sbjct: 624 HDPKSKNRR 632


>sp|PRIM_PSHV1|DNA primase|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 GLHDPKKNRR 10
G H P+ N+R
Sbjct: 660 GAHMPRANKR 669


>sp|UL13_EHV1V|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Equine herpesvirus 1 (strain V592)

Query: 1 GLHDPKKNRR 10
G H P K RR
Sbjct: 145 GWHSPPKRRR 154


>sp|UL13_EHV1B|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 1 GLHDPKKNRR 10
G H P K RR
Sbjct: 145 GWHSPPKRRR 154


>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1

Query: 2 LHDPKK 7
LHDP+K
Sbjct: 601 LHDPQK 606


>sp|SIGM3_REOVL|OUTER capsid protein sigma-3|Reovirus type 1 (strain Lang)

Query: 3 HDPKKNR 9
HDP K R
Sbjct: 230 HDPSKGR 236


>sp|SIGM3_REOVD|OUTER capsid protein sigma-3|Reovirus type 3 (strain Dearing)

Query: 3 HDPKKNR 9
HDP K R
Sbjct: 230 HDPSKGR 236




22|Sequence|106|115|KKNRRWHWSS

>sp|SPIKE_CVBLY|SPIKE glycoprotein|Bovine coronavirus (strain LY-138) (BCoV)

Query: 3 NRR---WHWSS 10
NRR WHW +
Sbjct: 178 NRRIELWHWDT 188


>sp|SPIKE_CVBLU|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 3 NRR---WHWSS 10
NRR WHW +
Sbjct: 178 NRRVELWHWDT 188


>sp|SPIKE_CVBF|SPIKE glycoprotein|Bovine coronavirus (strain F15) (BCoV)

Query: 3 NRR---WHWSS 10
NRR WHW +
Sbjct: 178 NRRVELWHWDT 188


>sp|GP_INSV|ENVELOPMENT polyprotein|Impatiens necrotic spot virus (INSV)

Query: 1 KKNRRWHWSS 10
+KN++++W+S
Sbjct: 391 EKNKKYNWAS 400


>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P

Query: 2 KNRRW 6
KNRRW
Sbjct: 13 KNRRW 17


>sp|RDRP_RRSVT|RNA-DIRECTED RNA polymerase|Rice ragged stunt virus (isolate

Query: 3 NRRWHW 8
NR W+W
Sbjct: 898 NRYWYW 903


>sp|IE1_NPVAC|TRANS-ACTIVATING transcriptional regulatory protein|Autographa californica nuclear

Query: 1 KKNRRWHWSS 10
KKN+ ++W S
Sbjct: 498 KKNKEFYWIS 507


>sp|SPIKE_CVBQ|SPIKE glycoprotein|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 KKNRRWHWSS 10
K+ WHW +
Sbjct: 179 KRVELWHWDT 188


>sp|SPIKE_CVBM|SPIKE glycoprotein|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 KKNRRWHWSS 10
K+ WHW +
Sbjct: 179 KRVELWHWDT 188


>sp|SPIKE_CVBL9|SPIKE glycoprotein|Bovine coronavirus (strain L9) (BCoV)

Query: 1 KKNRRWHWSS 10
K+ WHW +
Sbjct: 179 KRVELWHWDT 188


>sp|VP2_ROTPC|INNER capsid protein VP2|Rotavirus C (strain RVC/Pig/United

Query: 1 KKNRRWHW 8
K + RW+W
Sbjct: 143 KLSTRWYW 150


>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United

Query: 1 KKNRRWHW 8
K + RW+W
Sbjct: 145 KLSTRWYW 152


>sp|SPIKE_CVBV|SPIKE glycoprotein|Bovine coronavirus (strain vaccine) (BCoV)

Query: 6 WHWSS 10
WHW +
Sbjct: 184 WHWDT 188


>sp|SPIKE_CVBOK|SPIKE glycoprotein|Bovine coronavirus (strain OK-0514) (BCoV)

Query: 6 WHWSS 10
WHW +
Sbjct: 184 WHWDT 188


>sp|SPIKE_CVBLS|SPIKE glycoprotein|Bovine coronavirus (strain LSU-94LSS-051) (BCoV-LSU)

Query: 6 WHWSS 10
WHW +
Sbjct: 184 WHWDT 188


>sp|SPIKE_CVBEN|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 6 WHWSS 10
WHW +
Sbjct: 184 WHWDT 188


>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 KNRRWHWS 9
++RRW W+
Sbjct: 254 ESRRWWWA 261


>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 KNRRWHWS 9
++RRW W+
Sbjct: 254 ESRRWWWA 261


>sp|H962R_ASFB7|PUTATIVE primase C962R|African swine fever virus (strain

Query: 2 KNRRWHWS 9
KN+ W WS
Sbjct: 939 KNKWWEWS 946


>sp|VE2_HPV33|REGULATORY protein E2|Human papillomavirus 33

Query: 6 WHWSS 10
WHW+S
Sbjct: 307 WHWTS 311


>sp|H962R_ASFM2|PUTATIVE primase C962R|African swine fever virus (isolate

Query: 2 KNRRWHWS 9
KN+ W WS
Sbjct: 939 KNKWWEWS 946


>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69

Query: 1 KKNRRWHWSS 10
K + WHW+S
Sbjct: 320 KVSSTWHWTS 329


>sp|H962R_ASFWA|PUTATIVE primase C962R|African swine fever virus (isolate

Query: 2 KNRRWHWS 9
KN+ W WS
Sbjct: 939 KNKWWEWS 946


>sp|H962R_ASFP4|PUTATIVE primase C962R|African swine fever virus (isolate

Query: 2 KNRRWHWS 9
KN+ W WS
Sbjct: 939 KNKWWEWS 946


>sp|TATR_NPVBM|TRANS-ACTIVATING transcriptional regulatory protein|Bombyx mori nuclear polyhedrosis

Query: 1 KKNRRWHWSS 10
KKN ++W S
Sbjct: 503 KKNEEFYWIS 512


>sp|VE2_HPV58|REGULATORY protein E2|Human papillomavirus 58

Query: 6 WHWSS 10
WHW+S
Sbjct: 312 WHWTS 316


>sp|VE2_HPV52|REGULATORY protein E2|Human papillomavirus 52

Query: 6 WHWSS 10
WHW+S
Sbjct: 321 WHWTS 325


>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 3 NRRWHWSS 10
++ WHW++
Sbjct: 160 SKGWHWNA 167


>sp|ORF1_SPV1C|UNCHARACTERIZED protein ORF1|Spiroplasma virus SpV1-C74 (SpV1)

Query: 2 KNRRWHW 8
KN+ W+W
Sbjct: 212 KNKEWNW 218


>sp|VE2_HPV51|REGULATORY protein E2|Human papillomavirus 51

Query: 6 WHWSS 10
WHW+S
Sbjct: 315 WHWTS 319


>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26

Query: 6 WHWSS 10
WHW+S
Sbjct: 330 WHWTS 334


>sp|POL_CYLCV|ENZYMATIC polyprotein|Cestrum yellow leaf curling virus

Query: 6 WHWS 9
WHWS
Sbjct: 475 WHWS 478




23|Sequence|111|120|WHWSSGSLVS

>sp|POLG_HED68|GENOME polyprotein|Human enterovirus D68 (EV68) (EV-68)

Query: 1 WHWSSGSLVS 10
+HW SGS S
Sbjct: 725 FHWQSGSNAS 734


>sp|YO13_BPL2|UNCHARACTERIZED 81.3 kDa protein|Acholeplasma phage L2 (Bacteriophage L2)

Query: 1 WHWSSGSLVS 10
++W +GS+VS
Sbjct: 343 FYWENGSVVS 352


>sp|VG77_ICHVA|UNCHARACTERIZED protein ORF77|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 HWSSG 6
HWSSG
Sbjct: 36 HWSSG 40


>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62

Query: 2 HWSSGSL 8
HW+ G+L
Sbjct: 167 HWTKGTL 173


>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 2 HWSSGSLVS 10
HW SG+ ++
Sbjct: 22 HWDSGATIT 30


>sp|POL_SFVCP|PRO-POL polyprotein|Simian foamy virus (isolate chimpanzee)

Query: 2 HWSSGSLVS 10
HW SG+ ++
Sbjct: 22 HWDSGATIT 30


>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54

Query: 2 HWSSGSLVS 10
HW+ G+L +
Sbjct: 164 HWAKGNLCT 172


>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45

Query: 2 HWSSGSL 8
HW+ G+L
Sbjct: 195 HWAKGTL 201


>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3

Query: 2 HWSSGSLVS 10
HW SG+ ++
Sbjct: 22 HWDSGATIT 30


>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1

Query: 2 HWSSGSLVS 10
HW SG+ ++
Sbjct: 22 HWDSGATIT 30


>sp|POLS_DXV96|STRUCTURAL polyprotein|Drosophila x virus (isolate Chung/1996)

Query: 2 HWSSGS 7
HW++GS
Sbjct: 718 HWTAGS 723


>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 1 WHWSSGSLVS 10
W W G L+S
Sbjct: 2859 WIWHLGFLIS 2868




24|Sequence|116|125|GSLVSYKSWG

>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 2 SLVSYKSWG 10
S VS+KSWG
Sbjct: 888 SKVSWKSWG 896


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 4 VSYKSWG 10
VS+KSWG
Sbjct: 890 VSWKSWG 896


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 4 VSYKSWG 10
VS+KSWG
Sbjct: 890 VSWKSWG 896


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 4 VSYKSWG 10
VS+KSWG
Sbjct: 890 VSWKSWG 896


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 6 YKSWG 10
YKSWG
Sbjct: 1091 YKSWG 1095


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 6 YKSWG 10
YKSWG
Sbjct: 1091 YKSWG 1095


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 4 VSYKSWG 10
+ YKSWG
Sbjct: 1089 LRYKSWG 1095


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 6 YKSWG 10
YKSWG
Sbjct: 1091 YKSWG 1095


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 6 YKSWG 10
YKSWG
Sbjct: 1091 YKSWG 1095


>sp|YL007_MIMIV|UNCHARACTERIZED protein L7|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GSLVSYKS 8
GSL+SYK+
Sbjct: 41 GSLISYKN 48


>sp|GLYCO_TIBVC|GLYCOPROTEIN virus (strain CS132) (TIBV)

Query: 1 GSLVSYKSW 9
G+L+S K W
Sbjct: 600 GTLISIKVW 608


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 4 VSYKSWG 10
+S+KSWG
Sbjct: 890 ISWKSWG 896


>sp|ORF3_TTVD1|UNCHARACTERIZED ORF3 protein|Torque teno tupaia virus (isolate

Query: 3 LVSYKSW 9
L+S+KSW
Sbjct: 12 LLSHKSW 18


>sp|GCVK_SHV21|PROBABLE ganciclovir kinase|Saimiriine herpesvirus 2 (strain 11)

Query: 1 GSLVSYKSW 9
GSL +K W
Sbjct: 155 GSLYDFKCW 163


>sp|TSP_BPBMU|TAIL sheath protein|Burkholderia phage BcepMu (isolate -/United

Query: 1 GSLVSYKSW 9
G+L+ +K+W
Sbjct: 420 GALLGFKAW 428


>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954

Query: 2 SLVSYKSW 9
SLVS KSW
Sbjct: 86 SLVSKKSW 93


>sp|HEMA_I80AA|HEMAGGLUTININ A virus (strain A/India/6263/1980

Query: 2 SLVSYKSW 9
SLVS KSW
Sbjct: 86 SLVSKKSW 93


>sp|HEMA_I82A2|HEMAGGLUTININ A virus (strain A/Camel/Mongolia/1982

Query: 2 SLVSYKSW 9
SLVS KSW
Sbjct: 66 SLVSKKSW 73


>sp|PURZ_BPSHA|N6-SUCCINO-2-AMINO-2'-DEOXYADENYLATE synthase|Acinetobacter phage SH-Ab 15497

Query: 1 GSLVSYKSWG 10
G VSY WG
Sbjct: 346 GGDVSYIGWG 355




25|Sequence|121|130|YKSWGIGAPS

>sp|VE6_HPV41|PROTEIN E6|Human papillomavirus type 41

Query: 1 YKSWGIGAPS 10
Y SWG G P+
Sbjct: 63 YLSWGEGGPT 72


>sp|L_GOGV|RNA-DIRECTED RNA polymerase L|Alethinophid 1 reptarenavirus (isolate

Query: 1 YKSWGIGAP 9
YK W G P
Sbjct: 2051 YKDWASGTP 2059


>sp|US426_GAHVG|UNCHARACTERIZED 15.7 kDa protein|Gallid herpesvirus 2 (strain GA)

Query: 1 YKSWGIGAP 9
+ SW +G P
Sbjct: 58 FSSWALGVP 66


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 YKSWGIGAP 9
Y SW +G P
Sbjct: 5459 YLSWEVGKP 5467


>sp|RDRP_BTV10|RNA-DIRECTED RNA polymerase|Bluetongue virus 10 (isolate USA)

Query: 2 KSWGIGA 8
K WG+GA
Sbjct: 270 KMWGVGA 276


>sp|RDRP_AHSV|RNA-DIRECTED RNA polymerase|African horse sickness virus (AHSV)

Query: 2 KSWGIG 7
K+WGIG
Sbjct: 268 KNWGIG 273


>sp|VF067_IIV3|UNCHARACTERIZED protein 004R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 YKSWGIGAPS 10
YK G GAPS
Sbjct: 162 YKQVGEGAPS 171


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 YKSWG 5
YKSWG
Sbjct: 1091 YKSWG 1095


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 YKSWG 5
YKSWG
Sbjct: 1091 YKSWG 1095


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 YKSWG 5
YKSWG
Sbjct: 1091 YKSWG 1095


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 YKSWG 5
YKSWG
Sbjct: 1091 YKSWG 1095


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 YKSWG 5
YKSWG
Sbjct: 1091 YKSWG 1095


>sp|NSS_RVFVZ|NON-STRUCTURAL protein S|Rift valley fever virus (strain

Query: 3 SWGIGAPS 10
SW +G PS
Sbjct: 112 SWPLGEPS 119


>sp|IR10_HCMVM|PROTEIN IRL10|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 YKSWGIGA 8
Y +WG G+
Sbjct: 77 YSAWGAGS 84


>sp|IR10_HCMVA|PROTEIN IRL10|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 YKSWGIGA 8
Y +WG G+
Sbjct: 78 YSAWGAGS 85


>sp|ICP4_SUHVK|MAJOR viral transcription factor ICP4|Suid herpesvirus 1 (strain Kaplan)

Query: 4 WGIGAP 9
WG+GAP
Sbjct: 1299 WGLGAP 1304


>sp|S3_DPIRV|UNCHARACTERIZED protein S3|Diadromus pulchellus idnoreovirus 1 (DpIRV-1)

Query: 1 YKSWGI 6
Y SWG+
Sbjct: 107 YSSWGV 112


>sp|S3BIS_DPIRV|UNCHARACTERIZED protein S3bis|Diadromus pulchellus idnoreovirus 1 (DpIRV-1)

Query: 1 YKSWGI 6
Y SWG+
Sbjct: 107 YSSWGV 112


Query: 1 YKSWGI 6
Y SWG+
Sbjct: 457 YSSWGV 462


Query: 1 YKSWGI 6
Y SWG+
Sbjct: 807 YSSWGV 812


>sp|VTER_ICHVA|PROBABLE DNA-packaging protein|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 KSWGIGA 8
K WGIG+
Sbjct: 66 KLWGIGS 72


>sp|Y217A_AFV2P|UNCHARACTERIZED protein ORF217a|Acidianus filamentous virus 2 (isolate

Query: 1 YKSWGIGAP 9
++ WG G P
Sbjct: 127 WEEWGFGKP 135


>sp|ICP4_SUHVF|MAJOR viral transcription factor ICP4|Suid herpesvirus 1 (strain

Query: 4 WGIGAP 9
WG+GAP
Sbjct: 1315 WGLGAP 1320


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4 WGIGAPS 10
WG GAP+
Sbjct: 2020 WGNGAPT 2026


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 4 WGIGAPS 10
WG GAP+
Sbjct: 1993 WGNGAPT 1999


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 4 WGIGAPS 10
WG GAP+
Sbjct: 1998 WGNGAPT 2004


>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)

Query: 4 WGIGAP 9
WG+GAP
Sbjct: 1175 WGLGAP 1180




26|Sequence|126|135|IGAPSSVNPG

>sp|VL2_HPV04|MINOR capsid protein L2|Human papillomavirus 4

Query: 1 IGAPSSVNP 9
IGAPS V P
Sbjct: 72 IGAPSRVTP 80


>sp|POLG_EBHSG|GENOME polyprotein|European brown hare syndrome virus

Query: 2 GAPSSVNP 9
GAPSS+ P
Sbjct: 2137 GAPSSIRP 2144


>sp|RDRP_MNSV|RNA-DIRECTED RNA polymerase|Melon necrotic spot virus (MNSV)

Query: 1 IGAPSSVNPG 10
+G SS++PG
Sbjct: 369 VGTHSSISPG 378


>sp|VL2_HPV65|MINOR capsid protein L2|Human papillomavirus 65

Query: 1 IGAPSSVNP 9
+GAPS V P
Sbjct: 72 LGAPSRVTP 80


>sp|VL2_HPV38|MINOR capsid protein L2|Human papillomavirus 38

Query: 2 GAPSSVNPG 10
GAP+ V PG
Sbjct: 82 GAPTVVRPG 90


>sp|VL2_HPV37|MINOR capsid protein L2|Human papillomavirus 37

Query: 2 GAPSSVNPG 10
GAP+ V PG
Sbjct: 82 GAPTIVRPG 90




27|Sequence|131|140|SVNPGYCVSL

>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 NPGYCVSL 10
PGYCVSL
Sbjct: 2511 KPGYCVSL 2518


>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 NPGYCVSL 10
PGYCVSL
Sbjct: 2509 RPGYCVSL 2516


>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 NPGYCVSL 10
PGYCVSL
Sbjct: 2509 RPGYCVSL 2516


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 NPGYCVSL 10
PGYCVSL
Sbjct: 2511 KPGYCVSL 2518


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 4 PGYCVSL 10
PGYCVSL
Sbjct: 2510 PGYCVSL 2516


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 4 PGYCVSL 10
PGYCVSL
Sbjct: 2510 PGYCVSL 2516


>sp|ICP4_PSHV1|MAJOR viral transcription factor ICP4|Psittacid herpesvirus 1 (isolate

Query: 1 SVNPGYCVSL 10
SV+PG+C S+
Sbjct: 75 SVSPGFCSSI 84


>sp|PORTL_BPPHE|PROBABLE portal protein|Enterococcus phage phiEF24C (Enterococcus

Query: 1 SVNPGY 6
SVNPGY
Sbjct: 67 SVNPGY 72


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 5 GYCVSL 10
GYCVSL
Sbjct: 784 GYCVSL 789


>sp|VF115_IIV3|UNCHARACTERIZED protein 031R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 SVNPGYC 7
+V+PGYC
Sbjct: 72 NVSPGYC 78


>sp|NEC1_HHV8P|NUCLEAR egress protein 1|Human herpesvirus 8 type P

Query: 1 SVNPGYCVSL 10
+V PG CVSL
Sbjct: 96 TVAPGRCVSL 105


>sp|L_EMARV|RNA-DIRECTED RNA polymerase L|European mountain ash ringspot-associated virus

Query: 2 VNPGYCVS 9
VNP +C+S
Sbjct: 1543 VNPMWCIS 1550


>sp|VP1_AQRVG|OUTER capsid protein VP1|Aquareovirus G (isolate American grass

Query: 1 SVNPGYCVS 9
++N GYC+S
Sbjct: 428 NINHGYCIS 436


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 3 NPGYCVS 9
NP +CVS
Sbjct: 20 NPTFCVS 26


>sp|YR331_MIMIV|PUTATIVE zinc finger MYND domain-containing|Acanthamoeba polyphaga mimivirus

Query: 3 NPGYCVS 9
NPGY VS
Sbjct: 187 NPGYLVS 193


>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 1 SVNPGYCVSL 10
S N GYC+++
Sbjct: 943 SRNVGYCINI 952


>sp|NEC1_SHV21|NUCLEAR egress protein 1|Saimiriine herpesvirus 2 (strain 11)

Query: 1 SVNPGYCVSL 10
S++PG C+ L
Sbjct: 64 SISPGRCIYL 73


>sp|RDRP_GRVMC|RNA-DIRECTED RNA polymerase|Groundnut rosette virus (strain MC1)

Query: 2 VNPGYCV 8
VNPGY +
Sbjct: 823 VNPGYTI 829


>sp|RLIG_ASFB7|PUTATIVE RNA-ligase|African swine fever virus (strain

Query: 1 SVNPGYCVSL 10
++NP YC ++
Sbjct: 213 NLNPDYCYTI 222


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1 SVNPGYCVSL 10
S N GYC+++
Sbjct: 943 SRNVGYCINV 952


>sp|VF448_ASFWA|UNCHARACTERIZED protein M448R|African swine fever virus (isolate

Query: 1 SVNPGYCVSL 10
++NP YC ++
Sbjct: 213 NLNPDYCYTI 222


>sp|VF448_ASFP4|PUTATIVE RNA-ligase|African swine fever virus (isolate

Query: 1 SVNPGYCVSL 10
++NP YC ++
Sbjct: 213 NLNPDYCYTI 222


>sp|VP16_EHV4|TEGUMENT protein VP16 homolog|Equine herpesvirus 4 (strain 1942)

Query: 5 GYCVSL 10
GYCV+L
Sbjct: 189 GYCVAL 194


>sp|VP16_EHV1B|TEGUMENT protein VP16 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 5 GYCVSL 10
GYCV+L
Sbjct: 214 GYCVAL 219


>sp|MCE_RDVF|PUTATIVE mRNA-capping enzyme P5|Rice dwarf virus (isolate Fujian)

Query: 3 NPGYCV 8
NP YC+
Sbjct: 3 NPDYCI 8


>sp|MCE_RDVA|PUTATIVE mRNA-capping enzyme P5|Rice dwarf virus (isolate Akita)

Query: 3 NPGYCV 8
NP YC+
Sbjct: 3 NPDYCI 8




28|Sequence|136|145|YCVSLTSSTG

>sp|MCP_PPV01|MAJOR capsid protein|Phaeocystis pouchetii virus (PpV01)

Query: 1 YCVSLTSST 9
YC SLT+ST
Sbjct: 312 YCSSLTAST 320


>sp|YR818_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R818|Acanthamoeba

Query: 1 YCVSLTSSTG 10
YC ++ SS+G
Sbjct: 735 YCENIVSSSG 744


>sp|TCRM_VACCW|TRUNCATED Cytokine response-modifying protein B|Vaccinia virus (strain

Query: 2 CVSLTSSTG 10
C+ LT++TG
Sbjct: 6 CIQLTTTTG 14




29|Sequence|141|150|TSSTGFQKWK

>sp|VP1_POVBK|MAJOR capsid protein VP1|BK polyomavirus (BKPyV) (Human polyomavirus

Query: 1 TSSTGFQKWK 10
T+S+G Q+W+
Sbjct: 272 TNSSGTQQWR 281


>sp|VP1_POVS1|MAJOR capsid protein VP1|Simian virus 12 (strain wt100)

Query: 1 TSSTGFQKWK 10
T+S+G Q+W+
Sbjct: 272 TNSSGTQQWR 281


>sp|VP1_POVBA|MAJOR capsid protein VP1|BK polyomavirus (strain AS) (BKPyV)

Query: 1 TSSTGFQKWK 10
T+S+G Q+W+
Sbjct: 272 TNSSGTQQWR 281


>sp|RDRP_ASPVP|RNA replication polyprotein|Apple stem pitting virus (isolate

Query: 2 SSTGFQKWK 10
S +GF++WK
Sbjct: 1027 SFSGFRRWK 1035


>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2 SSTGFQKWK 10
+ +GF++WK
Sbjct: 1036 APSGFERWK 1044


>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)

Query: 2 SSTGFQKWK 10
+ +GF++WK
Sbjct: 1035 APSGFERWK 1043


>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2 SSTGFQKWK 10
+ +GF++WK
Sbjct: 1038 APSGFERWK 1046


>sp|EXON_IIV6|PUTATIVE exonuclease 012L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 TSSTGFQK 8
TSS+GFQK
Sbjct: 490 TSSSGFQK 497


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 2 SSTGFQKWK 10
+S+GF+ WK
Sbjct: 1042 ASSGFEMWK 1050


>sp|VG01_ICHVA|UNCHARACTERIZED protein ORF1|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 TSSTGFQKW 9
TS +GF++W
Sbjct: 386 TSQSGFKRW 394


>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2 SSTGFQKWK 10
+ +GF++WK
Sbjct: 1038 APSGFERWK 1046


>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2 SSTGFQKWK 10
+ +GF++WK
Sbjct: 1038 APSGFERWK 1046


>sp|HELI1_SFAVA|PUTATIVE ATP-dependent RNA helicase|Spodoptera frugiperda ascovirus 1a

Query: 3 STGFQKW 9
+TG+Q W
Sbjct: 380 TTGYQSW 386


>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2 SSTGFQKWK 10
+ +GF++WK
Sbjct: 1049 APSGFEQWK 1057


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2 SSTGFQKWK 10
+ +GF++WK
Sbjct: 1048 APSGFEQWK 1056


>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2 SSTGFQKWK 10
+ +GF++WK
Sbjct: 1049 APSGFEQWK 1057


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2 SSTGFQKWK 10
+ +GF++WK
Sbjct: 1048 APSGFEQWK 1056


>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2 SSTGFQKWK 10
+ +GF++WK
Sbjct: 1048 APSGFEQWK 1056


>sp|LEF4_NPVOP|MRNA capping enzyme LEF-4|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 3 STGFQKW 9
STG +KW
Sbjct: 241 STGVKKW 247


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 1 TSSTGFQKW 9
T + GF KW
Sbjct: 387 TIAQGFSKW 395


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 2 SSTGFQKWK 10
+++GF+ WK
Sbjct: 1042 AASGFEMWK 1050


>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)

Query: 1 TSSTGFQK 8
TSSTGF K
Sbjct: 298 TSSTGFYK 305


>sp|CAPSD_BPCA1|MAJOR capsid protein|Bacteroides phage crAss001 (Bacteroides phage

Query: 5 GFQKWK 10
GFQ WK
Sbjct: 12 GFQHWK 17




30|Sequence|146|155|FQKWKDVPCE

>sp|POL1_CRLVP|RNA1 polyprotein|Cherry rasp leaf virus (isolate

Query: 1 FQKWKD 6
FQKWKD
Sbjct: 1125 FQKWKD 1130


>sp|NEC2_HHV2H|NUCLEAR egress protein 2|Human herpesvirus 2 (strain HG52)

Query: 4 WKDVPC 9
W DVPC
Sbjct: 76 WADVPC 81


>sp|POLG_AEVVR|GENOME polyprotein|Avian encephalomyelitis virus (strain Van

Query: 1 FQKWKDVPC 9
F +W +PC
Sbjct: 293 FSQWTSIPC 301


>sp|POLG_AEVL2|GENOME polyprotein|Avian encephalomyelitis virus (strain L2Z)

Query: 1 FQKWKDVPC 9
F +W +PC
Sbjct: 293 FSQWTSIPC 301


>sp|POLG_AEVCA|GENOME polyprotein|Avian encephalomyelitis virus (strain Calnek

Query: 1 FQKWKDVPC 9
F +W +PC
Sbjct: 293 FSQWTSIPC 301


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 2 QKWKDVP 8
+KW+DVP
Sbjct: 3341 KKWRDVP 3347


>sp|MATA_BPPP7|MATURATION protein A|Pseudomonas phage PP7 (Bacteriophage PP7)

Query: 1 FQKWKDVP 8
F +WKD P
Sbjct: 375 FARWKDFP 382


>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)

Query: 2 QKWKDVPCE 10
++W D+PC+
Sbjct: 237 EEWLDLPCK 245


>sp|L_HIRRV|RNA-DIRECTED RNA polymerase L|Hirame rhabdovirus (strain Korea/CA 9703/1997)

Query: 1 FQKWKDVP 8
Q+W DVP
Sbjct: 1633 LQEWADVP 1640


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 2 QKWKDVP 8
+KW DVP
Sbjct: 3364 EKWSDVP 3370


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 2 QKWKDVP 8
+KW DVP
Sbjct: 3364 EKWSDVP 3370


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1 FQKWKDV 7
++KWKD+
Sbjct: 931 YKKWKDI 937


>sp|NEC2_HHV11|NUCLEAR egress protein 2|Human herpesvirus 1 (strain 17)

Query: 4 WKDVPC 9
W +VPC
Sbjct: 76 WAEVPC 81


>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)

Query: 1 FQKWKDV 7
F+KW DV
Sbjct: 639 FEKWGDV 645


>sp|YL759_MIMIV|UNCHARACTERIZED protein L759|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FQKWKDVP 8
F +W+D+P
Sbjct: 188 FMEWRDLP 195


>sp|LTP_MHV68|LARGE tegument protein deneddylase|Murid herpesvirus 4 (MuHV-4) (Murine

Query: 1 FQKWK 5
FQKWK
Sbjct: 1383 FQKWK 1387


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2 QKWKDVP 8
++W+DVP
Sbjct: 3341 KEWRDVP 3347


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2 QKWKDVP 8
++W+DVP
Sbjct: 3341 KEWRDVP 3347


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 2 QKWKDVP 8
++W+DVP
Sbjct: 3342 KEWRDVP 3348


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 2 QKWKDVP 8
++W+DVP
Sbjct: 3341 KEWRDVP 3347


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 2 QKWKDVP 8
++W+DVP
Sbjct: 3342 KEWRDVP 3348


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 2 QKWKDVP 8
++W+DVP
Sbjct: 3341 KEWRDVP 3347


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 2 QKWKDVP 8
++W+DVP
Sbjct: 3342 KEWRDVP 3348


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 4 WKDVP 8
WKDVP
Sbjct: 3361 WKDVP 3365


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 2 QKWKDVP 8
++W+DVP
Sbjct: 3341 KEWRDVP 3347


>sp|DUHM_BPW14|DEOXYURIDYLATE hydroxymethyltransferase|Delftia phage PhiW-14 (Deftia acidovorans

Query: 5 KDVPC 9
KDVPC
Sbjct: 158 KDVPC 162


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 2 QKWKDVP 8
++W DVP
Sbjct: 3361 ERWSDVP 3367


>sp|V219_FOWPN|PUTATIVE ankyrin repeat protein FPV219|Fowlpox virus (strain NVSL) (FPV)

Query: 4 WKDVPCE 10
WK++P E
Sbjct: 407 WKNIPIE 413


>sp|GB_BHV2B|ENVELOPE glycoprotein B|Bovine herpesvirus 2 (strain BMV)

Query: 3 KWKDVP 8
KW++VP
Sbjct: 391 KWREVP 396


>sp|YL247_MIMIV|UNCHARACTERIZED HNH endonuclease L247|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 WKDVPCE 10
WK++P E
Sbjct: 13 WKEIPIE 19


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 2 QKWKDVP 8
Q W D+P
Sbjct: 3365 QSWTDIP 3371


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 2 QKWKDVP 8
++W+D+P
Sbjct: 3345 KEWRDIP 3351


>sp|VNS2_EHDV2|NON-STRUCTURAL protein NS2|Epizootic hemorrhagic disease virus 2

Query: 2 QKWKDVP 8
QKW +VP
Sbjct: 329 QKWDNVP 335


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 3 KWKDVP 8
+W+DVP
Sbjct: 3344 EWRDVP 3349


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 3 KWKDVP 8
+W+DVP
Sbjct: 3344 EWRDVP 3349


Query: 1 FQKWKDVP 8
F W++VP
Sbjct: 3212 FSSWEEVP 3219


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 3 KWKDVP 8
+W+DVP
Sbjct: 3344 EWRDVP 3349


Query: 1 FQKWKDVP 8
F W++VP
Sbjct: 3212 FSSWEEVP 3219


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 3 KWKDVP 8
+W+DVP
Sbjct: 3344 EWRDVP 3349


Query: 1 FQKWKDVP 8
F W++VP
Sbjct: 3212 FSSWEEVP 3219


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 3 KWKDVP 8
KW D+P
Sbjct: 3354 KWTDIP 3359


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 3 KWKDVP 8
KW D+P
Sbjct: 3354 KWTDIP 3359


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 3 KWKDVP 8
KW D+P
Sbjct: 3350 KWTDIP 3355


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 2 QKWKDVP 8
++W+D+P
Sbjct: 3345 REWRDIP 3351


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 3 KWKDVP 8
+W+DVP
Sbjct: 3342 EWRDVP 3347


Query: 1 FQKWKDVP 8
F W++VP
Sbjct: 3210 FSNWEEVP 3217


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1 FQKWKDVP 8
F +W++VP
Sbjct: 3213 FTEWEEVP 3220


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 2 QKWKDV 7
+KWKD+
Sbjct: 841 KKWKDI 846


>sp|Y076_OSHVF|UNCHARACTERIZED protein ORF76|Ostreid herpesvirus 1 (isolate France)

Query: 1 FQKWKDVPCE 10
F+KW D C+
Sbjct: 22 FKKWHDHECD 31


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1 FQKWKDVP 8
F W++VP
Sbjct: 3212 FSSWEEVP 3219


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 2 QKWKDVPCE 10
KWK V C+
Sbjct: 1572 HKWKMVVCD 1580


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 4 WKDVP 8
WKDVP
Sbjct: 992 WKDVP 996


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2 QKWKDVPCE 10
KWK V C+
Sbjct: 1572 HKWKMVVCD 1580


>sp|POL_SIVGB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate GB1)

Query: 2 QKWKDVPC 9
Q WK PC
Sbjct: 747 QGWKGSPC 754




31|Sequence|151|160|DVPCEDKFSF

>sp|POL_BLVJ|GAG-PRO-POL polyprotein|Bovine leukemia virus (isolate Japanese

Query: 2 VPCEDKFSF 10
+P ED+F F
Sbjct: 660 IPVEDRFRF 668


>sp|POL2_TOTV|RNA2 polyprotein|Tomato torrado virus (isolate Solanum

Query: 2 VPCEDKFSF 10
VP DKFS+
Sbjct: 976 VPLRDKFSY 984


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 4 CEDKFSF 10
C+DKF+F
Sbjct: 590 CKDKFAF 596


>sp|V228_FOWPN|PUTATIVE ankyrin repeat protein FPV228|Fowlpox virus (strain NVSL) (FPV)

Query: 4 CEDKFSF 10
CED+F F
Sbjct: 418 CEDEFRF 424


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 4 CEDKFS 9
C+DKFS
Sbjct: 242 CDDKFS 247


>sp|ETM_NPVAC|ECORI-T site protein ETM|Autographa californica nuclear polyhedrosis

Query: 2 VPCEDKFSF 10
VP ED F F
Sbjct: 81 VPVEDTFDF 89


>sp|YR597_MIMIV|PUTATIVE ankyrin repeat protein R597|Acanthamoeba polyphaga mimivirus

Query: 1 DVPCEDKFSF 10
+V C+D+F +
Sbjct: 32 EVSCDDEFGY 41


>sp|GAG_AVIER|GAG polyprotein|Avian erythroblastosis virus (strain ES4)

Query: 1 DVPCEDK 7
++PCED+
Sbjct: 395 ELPCEDQ 401




32|Sequence|156|166|DKFSFVCKFKN

>sp|NCAP_IPPYV|NUCLEOPROTEIN mammarenavirus (isolate Rat/Central African

Query: 1 DKFSFVCK 8
DKF F+CK
Sbjct: 501 DKFGFLCK 508


>sp|YR634_MIMIV|PUTATIVE ankyrin repeat protein R634|Acanthamoeba polyphaga mimivirus

Query: 1 DKFSFVCKFK 10
+K+ VCKFK
Sbjct: 70 EKYPIVCKFK 79


>sp|NCAP_TACVF|NUCLEOPROTEIN virus (strain Franze-Fernandez) (TCRV)

Query: 1 DKFSFVCKFKN 11
DKF +CK N
Sbjct: 497 DKFGHLCKQHN 507


>sp|VP80_NPVAC|CAPSID-ASSOCIATED protein VP80|Autographa californica nuclear polyhedrosis virus

Query: 2 KFSFVCKFKN 11
KF+F+C +N
Sbjct: 615 KFNFLCDMRN 624


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2 KFSFVCKFKN 11
KFS VCK K+
Sbjct: 1276 KFSRVCKPKS 1285


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2 KFSFVCKFKN 11
KFS VCK K+
Sbjct: 1276 KFSRVCKPKS 1285


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2 KFSFVCKFKN 11
KFS VCK K+
Sbjct: 1276 KFSRVCKPKS 1285


>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)

Query: 2 KFSFVCK 8
KFSF+C+
Sbjct: 139 KFSFICQ 145


>sp|LTP_EHV1B|LARGE tegument protein deneddylase|Equine herpesvirus 1 (strain Ab4p)

Query: 1 DKFSFVCK 8
D+FS CK
Sbjct: 2968 DRFSVACK 2975


>sp|POLG_RHDVB|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 3 FSFVCK 8
F+FVCK
Sbjct: 1719 FNFVCK 1724


>sp|POLG_RHDVA|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 3 FSFVCK 8
F+FVCK
Sbjct: 1719 FNFVCK 1724


>sp|PRIM_ELHVK|DNA primase|Elephantid herpesvirus 1 (isolate Asian

Query: 2 KFSFVCKFKN 11
KF+ CK KN
Sbjct: 254 KFTHYCKLKN 263


>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32

Query: 5 FVCKFKN 11
F C FKN
Sbjct: 168 FYCNFKN 174


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2 KFSFVCKFK 10
KFS VCK K
Sbjct: 1276 KFSRVCKPK 1284


>sp|POLN_EEVV|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (VEEV)

Query: 2 KFSFVCKFK 10
KFS VCK K
Sbjct: 1276 KFSRVCKPK 1284


>sp|POL1_GCMV|RNA1 polyprotein|Grapevine chrome mosaic virus (GCMV)

Query: 1 DKFSFVCKFKN 11
+ ++ +C+FKN
Sbjct: 2154 ETYAALCEFKN 2164


>sp|PCNA_MIMIV|PROBABLE DNA polymerase sliding clamp|Acanthamoeba polyphaga mimivirus

Query: 1 DKFSFVCKF 9
DKF +CK
Sbjct: 354 DKFHLICKH 362


>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)

Query: 6 VCKFKN 11
VCK+KN
Sbjct: 1674 VCKYKN 1679


>sp|POLG_SBMVG|GENOME polyprotein|Soybean mosaic virus (strain G2)

Query: 6 VCKFKN 11
VCK+KN
Sbjct: 1674 VCKYKN 1679


>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)

Query: 5 FVCKFKN 11
F CKF N
Sbjct: 39 FFCKFSN 45


>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)

Query: 5 FVCKFKN 11
F CKF N
Sbjct: 39 FFCKFSN 45


>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant

Query: 5 FVCKFKN 11
F CKF N
Sbjct: 39 FFCKFSN 45


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 DKFSFVC 7
D F FVC
Sbjct: 1926 DNFKFVC 1932


>sp|Y060_OSHVF|UNCHARACTERIZED protein ORF60|Ostreid herpesvirus 1 (isolate France)

Query: 1 DKFSFVCKF 9
DK FVC +
Sbjct: 199 DKMDFVCHY 207


>sp|5056R_ASFP4|PROTEIN MGF 505-6R|African swine fever virus (isolate

Query: 1 DKFSFVCKF 9
+K+S VC++
Sbjct: 92 EKYSLVCEY 100


>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)

Query: 1 DKFSFVCKFKN 11
+KF +CK N
Sbjct: 491 EKFGHLCKHHN 501


>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 1 DKFSFVCKFKN 11
+KF +CK N
Sbjct: 491 EKFGHLCKHHN 501






THE END