OXDD_HUMAN Blast Output
Archaea
1|Sequence|1|10|MDTARIAVVG

>sp|LYSY_SACS2|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DTARIAVVG 10
D R+AVVG
Sbjct: 3 DKVRVAVVG 11


>sp|CDC6O_HALMA|ORC1-TYPE DNA replication protein 15|Haloarcula marismortui (strain ATCC

Query: 1 MDTARIAVVG 10
+D+A++ V+G
Sbjct: 170 LDSAKVGVIG 179


>sp|PYRG_THEON|CTP synthase|Thermococcus onnurineus (strain NA1)

Query: 2 DTARIAVVG 10
DT IA+VG
Sbjct: 287 DTVEIAIVG 295


>sp|PYRG_THEKO|CTP synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DTARIAVVG 10
DT IA+VG
Sbjct: 287 DTVEIAIVG 295


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 DTARIAVVG 10
D RIAVVG
Sbjct: 288 DEIRIAVVG 296


>sp|NNRD_NATMM|ADP-DEPENDENT (S)-NAD(P)H-hydrate dehydratase|Natrialba magadii (strain ATCC

Query: 2 DTARIAVVG 10
D R+AVVG
Sbjct: 18 DNGRVAVVG 26


>sp|HEM1_AERPE|GLUTAMYL-TRNA reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 MDTARIAVVG 10
+D AR+ +VG
Sbjct: 169 LDGARVGIVG 178


>sp|GATE_DESA1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Desulfurococcus amylolyticus (strain DSM

Query: 1 MDTARIAVVG 10
++ ARIAV+G
Sbjct: 399 VERARIAVIG 408




2|Sequence|6|15|IAVVGAGVVG

>sp|HEM1_SULTO|GLUTAMYL-TRNA reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IAVVGAGVVG 10
IA+VGAG +G
Sbjct: 185 IAIVGAGEIG 194


>sp|HEM1_SULAC|GLUTAMYL-TRNA reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IAVVGAGVVG 10
IA+VGAG +G
Sbjct: 183 IAIVGAGEIG 192


>sp|Y636_METJA|UNCHARACTERIZED protein MJ0636|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IAVVGAGVVG 10
IAVVGAG G
Sbjct: 11 IAVVGAGPAG 20


>sp|HEM1_METS5|GLUTAMYL-TRNA reductase|Metallosphaera sedula (strain ATCC 51363

Query: 1 IAVVGAGVVG 10
IA++GAG +G
Sbjct: 184 IAILGAGEIG 193


>sp|UGNO_METMP|UDP-N-ACETYLGLUCOSAMINE 3-dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IAVVGAGVVG 10
+AVVG GV+G
Sbjct: 4 VAVVGIGVMG 13


>sp|HEM1_CALMQ|GLUTAMYL-TRNA reductase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 IAVVGAGVVG 10
IAV+GAG +G
Sbjct: 176 IAVIGAGSIG 185


>sp|Y1450_METJA|UNCHARACTERIZED protein MJ1450|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AVVGAGVVG 10
A++G+GV G
Sbjct: 5 AIIGSGVAG 13


>sp|SYP_METBF|PROLINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 VVGAGVVG 10
V+GAG++G
Sbjct: 443 VIGAGILG 450


>sp|GGR_THEGJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 IAVVGAGVVG 10
+ VVGAG+ G
Sbjct: 7 VVVVGAGIAG 16


>sp|NAOX_METJA|NADH oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IAVVGAGVVG 10
+AVVGAG +G
Sbjct: 152 VAVVGAGAIG 161


>sp|NADB_PYRFU|L-ASPARTATE oxidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IAVVGAGVVG 10
+AVVG+G+ G
Sbjct: 3 VAVVGSGLAG 12


>sp|GLCD3_SACS2|GLUCOSE 1-dehydrogenase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IAVVGAGVVG 10
+A+VG+G +G
Sbjct: 187 VAIVGSGPIG 196


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 IAVVGAGVVG 10
+AVVG+G G
Sbjct: 852 VAVVGSGADG 861


>sp|PC2DH_METJA|PUTATIVE precorrin-2 dehydrogenase|Methanocaldococcus jannaschii (strain

Query: 1 IAVVGAGVVG 10
+AV G G VG
Sbjct: 13 VAVFGCGSVG 22


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IAVVGAGVVG 10
IAV+G+G+ G
Sbjct: 854 IAVLGSGLDG 863


>sp|HIS81_ARCFU|HISTIDINOL-PHOSPHATE aminotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VVGAGVVG 10
VVGAG+ G
Sbjct: 54 VVGAGIDG 61


>sp|Y1365_METJA|UNCHARACTERIZED protein MJ1365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IAVVGAGVV 9
+AVVGAG V
Sbjct: 213 VAVVGAGHV 221


>sp|PSB1_THEGJ|PROTEASOME subunit beta 1|Thermococcus gammatolerans (strain DSM 15229

Query: 1 IAVVGAGVVG 10
+A+ GAG+VG
Sbjct: 51 LAIAGAGLVG 60


>sp|Y1182_METJA|UNCHARACTERIZED protein MJ1182|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IAVVGAGVVG 10
+ ++GAG+ G
Sbjct: 3 VCIIGAGLSG 12


>sp|DPDH_PYRIL|D-PROLINE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 IAVVGAGVVG 10
+A+VG G++G
Sbjct: 3 VAIVGGGIIG 12


>sp|Y433_ARCFU|PROBABLE S-adenosyl-L-methionine-binding protein AF_0433|Archaeoglobus

Query: 2 AVVGAGVV 9
AVVG G+V
Sbjct: 349 AVVGRGIV 356




3|Sequence|11|20|AGVVGLSTAV

>sp|MDH_AERPE|MALATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 1 AGVVGLSTAV 10
AG VG++TAV
Sbjct: 7 AGKVGMATAV 16




4|Sequence|16|25|LSTAVCISKL

>sp|TRUB_HALSA|PROBABLE tRNA pseudouridine synthase B|Halobacterium salinarum (strain ATCC

Query: 3 TAVCISKL 10
TAVC+ +L
Sbjct: 275 TAVCLGRL 282


>sp|TRUB_HALS3|PROBABLE tRNA pseudouridine synthase B|Halobacterium salinarum (strain ATCC

Query: 3 TAVCISKL 10
TAVC+ +L
Sbjct: 275 TAVCLGRL 282




5|Sequence|21|30|CISKLVPRCS

>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 1 CISKLVPRC 9
CIS+LV +C
Sbjct: 263 CISELVAKC 271


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 1 CISKLVPRC 9
CIS+LV +C
Sbjct: 263 CISELVAKC 271


>sp|PURA_METST|ADENYLOSUCCINATE synthetase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 CISKLVPRCS 10
CI +L P C+
Sbjct: 284 CIDRLYPECA 293


>sp|PURA_METS3|ADENYLOSUCCINATE synthetase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 CISKLVPRCS 10
C+ +L P C+
Sbjct: 284 CVDRLYPDCA 293


>sp|PURA_METTH|ADENYLOSUCCINATE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 CISKLVPRC 9
C+ +L P C
Sbjct: 284 CVDRLYPEC 292


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 CISKLVPRCS 10
C+++LVP S
Sbjct: 57 CLNRLVPEVS 66




6|Sequence|26|35|VPRCSVTIIS

>sp|ACDB2_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 1 VPRCSVTIIS 10
+ +C VTII+
Sbjct: 141 IEKCDVTIIT 150


>sp|RL34_PYRCJ|LARGE ribosomal subunit protein eL34|Pyrobaculum calidifontis (strain

Query: 1 VPRCSVT 7
VP+C+VT
Sbjct: 34 VPKCAVT 40


>sp|MTAA_METBA|METHYLCOBAMIDE:COM methyltransferase MtaA|Methanosarcina barkeri

Query: 1 VPRCSVT 7
VP CSVT
Sbjct: 22 VPVCSVT 28


>sp|AATF_THEAC|A-TYPE ATP synthase subunit F|Thermoplasma acidophilum (strain ATCC

Query: 2 PRCSVTIIS 10
P+C++ I+S
Sbjct: 44 PQCNIIIVS 52




7|Sequence|31|40|VTIISDKFTP

>sp|RADB_PYRAB|DNA repair and recombination protein|Pyrococcus abyssi (strain GE5 /

Query: 2 TIISDKFT 9
T++SDKF+
Sbjct: 101 TVVSDKFS 108


>sp|DHQS_METST|3-DEHYDROQUINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VTIISDK 7
VTIISDK
Sbjct: 45 VTIISDK 51


>sp|OTC_IGNH4|ORNITHINE carbamoyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VTIISDKFTP 10
+ +SDKF P
Sbjct: 126 INALSDKFHP 135


>sp|PELO_HALWD|PROTEIN pelota homolog|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VTIISDKFTP 10
VT++S +F P
Sbjct: 327 VTVLSGEFDP 336


>sp|NOB1_METTH|ENDORIBONUCLEASE Nob1|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VTIISDKFT 9
VT+I+D +T
Sbjct: 103 VTVITDDYT 111




8|Sequence|36|45|DKFTPDTTSD

>sp|ILVC_METS5|KETOL-ACID reductoisomerase (NAD(P)(+))|Metallosphaera sedula (strain ATCC

Query: 1 DKFTPDTTSD 10
D FTP T D
Sbjct: 63 DGFTPKKTED 72


>sp|PSB_ARCPA|PROTEASOME subunit beta|Archaeoglobus profundus (strain DSM 5631

Query: 1 DKFTPDTTSD 10
D++TP+ T D
Sbjct: 154 DRYTPEITVD 163


>sp|TRPE1_HALSA|ANTHRANILATE synthase component 1 1|Halobacterium salinarum (strain ATCC

Query: 2 KFTPDTTSD 10
FTPDTT++
Sbjct: 64 AFTPDTTTE 72


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DKFTPDTTSD 10
D F+P TSD
Sbjct: 659 DGFSPAQTSD 668


>sp|RS17E_METPE|SMALL ribosomal subunit protein eS17|Methanosphaerula palustris (strain

Query: 1 DKFTPD 6
D+FTPD
Sbjct: 21 DRFTPD 26


>sp|PSB1_METS5|PROTEASOME subunit beta 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 DKFTPDTTSD 10
D ++PD T D
Sbjct: 161 DGYSPDLTGD 170




9|Sequence|41|50|DTTSDVAAGM

>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 3 TSDVAAG 9
TSD+AAG
Sbjct: 993 TSDIAAG 999


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 3 TSDVAAG 9
TSD+AAG
Sbjct: 992 TSDIAAG 998


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 3 TSDVAAG 9
TSD+AAG
Sbjct: 985 TSDIAAG 991


>sp|LEU3_ARCFU|3-ISOPROPYLMALATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DTTSDVAAGM 10
D SD+AAG+
Sbjct: 222 DIVSDLAAGL 231


>sp|DPHB_HALLT|DIPHTHINE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 TSDVAAGM 10
T+DVAAG+
Sbjct: 188 TADVAAGL 195


>sp|SAHH_SULAC|ADENOSYLHOMOCYSTEINASE acidocaldarius (strain ATCC 33909

Query: 2 TTSDVAAGM 10
T DVAAG+
Sbjct: 80 TQDDVAAGL 88


>sp|FLAB5_PYRAB|FLAGELLIN B5|Pyrococcus abyssi (strain GE5 /

Query: 1 DTTSDVAAGM 10
+TT DV++G+
Sbjct: 45 ETTRDVSSGL 54




10|Sequence|46|55|VAAGMLIPHT

>sp|RL18_META3|LARGE ribosomal subunit protein uL18|Methanococcus aeolicus (strain ATCC

Query: 1 VAAGMLIPHT 10
V AGM IPH+
Sbjct: 124 VDAGMDIPHS 133


>sp|AMPP2_ARCFU|AMP phosphorylase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AAGMLIPHT 10
AAG+LIP T
Sbjct: 185 AAGLLIPKT 193


>sp|AMPPA_METAR|AMP phosphorylase|Methanocella arvoryzae (strain DSM 22066

Query: 2 AAGMLIPHT 10
AAG+LIP T
Sbjct: 184 AAGLLIPKT 192


>sp|AMPP1_ARCFU|AMP phosphorylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AAGMLIPHT 10
AAG+LIP T
Sbjct: 185 AAGLLIPKT 193


>sp|AMPPA_META3|AMP phosphorylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 AAGMLIPHT 10
AAGM IP T
Sbjct: 185 AAGMTIPKT 193


>sp|RL18_METJA|LARGE ribosomal subunit protein uL18|Methanocaldococcus jannaschii

Query: 3 AGMLIPH 9
AGM IPH
Sbjct: 126 AGMEIPH 132


>sp|AMPPA_METLZ|AMP phosphorylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 AAGMLIPHT 10
A+G+LIP T
Sbjct: 185 ASGLLIPKT 193


>sp|AMPPA_METTP|AMP phosphorylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 AAGMLIPHT 10
A+G+LIP T
Sbjct: 182 ASGLLIPKT 190


>sp|AMPPA_METHJ|AMP phosphorylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 AAGMLIPHT 10
A+G+LIP T
Sbjct: 185 ASGLLIPKT 193


>sp|AMPPA_METMJ|AMP phosphorylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 AAGMLIPHT 10
A+G+LIP T
Sbjct: 185 ASGLLIPKT 193


>sp|CBID_SULAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VAAGMLIPHT 10
VAAGML H+
Sbjct: 260 VAAGMLNTHS 269


>sp|RL18_METMP|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain

Query: 3 AGMLIPH 9
AGM IPH
Sbjct: 126 AGMDIPH 132


>sp|RL18_METM7|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain C7

Query: 3 AGMLIPH 9
AGM IPH
Sbjct: 126 AGMDIPH 132


>sp|RL18_METM6|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain C6

Query: 3 AGMLIPH 9
AGM IPH
Sbjct: 126 AGMDIPH 132


>sp|RL18_METM5|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain C5

Query: 3 AGMLIPH 9
AGM IPH
Sbjct: 126 AGMDIPH 132


>sp|PURP_SULTO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfurisphaera tokodaii (strain DSM

Query: 4 GMLIPH 9
G+LIPH
Sbjct: 66 GILIPH 71


>sp|PURP_SACS2|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Saccharolobus solfataricus (strain

Query: 4 GMLIPH 9
G+LIPH
Sbjct: 66 GILIPH 71


>sp|RL18_METKA|LARGE ribosomal subunit protein uL18|Methanopyrus kandleri (strain AV19 /

Query: 3 AGMLIPH 9
AGM IPH
Sbjct: 130 AGMDIPH 136


>sp|RL18_METST|LARGE ribosomal subunit protein uL18|Methanosphaera stadtmanae (strain

Query: 3 AGMLIPH 9
AG+ IPH
Sbjct: 126 AGLYIPH 132


>sp|HCGF_METLZ|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanocorpusculum labreanum

Query: 1 VAAGMLIP 8
V AGM IP
Sbjct: 43 VVAGMFIP 50


>sp|RS7_CALMQ|SMALL ribosomal subunit protein uS7|Caldivirga maquilingensis (strain

Query: 5 MLIPHT 10
ML+PHT
Sbjct: 67 MLLPHT 72


>sp|RL18_PYRAB|LARGE ribosomal subunit protein uL18|Pyrococcus abyssi (strain GE5 /

Query: 1 VAAGMLIPHT 10
V AG+ +PH+
Sbjct: 125 VDAGLNVPHS 134


>sp|AMPPA_THEON|AMP phosphorylase|Thermococcus onnurineus (strain NA1)

Query: 2 AAGMLIPHT 10
AAG+ IP T
Sbjct: 184 AAGLTIPKT 192


>sp|AMPPA_THESM|AMP phosphorylase|Thermococcus sibiricus (strain DSM 12597

Query: 2 AAGMLIPHT 10
AAG+ IP T
Sbjct: 184 AAGLTIPKT 192


>sp|AMPPA_THEGJ|AMP phosphorylase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 AAGMLIPHT 10
AAG+ IP T
Sbjct: 184 AAGLTIPKT 192


>sp|AMPPA_THEKO|AMP phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 AAGMLIPHT 10
AAG+ IP T
Sbjct: 184 AAGLTIPKT 192


>sp|AMPPA_PYRFU|AMP phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 AAGMLIPHT 10
AAG+ IP T
Sbjct: 184 AAGLTIPKT 192


>sp|RL18_PYRFU|LARGE ribosomal subunit protein uL18|Pyrococcus furiosus (strain ATCC

Query: 1 VAAGMLIPHT 10
V AG+ +PH+
Sbjct: 125 VDAGLNVPHS 134


>sp|RL18_THEON|LARGE ribosomal subunit protein uL18|Thermococcus onnurineus (strain NA1)

Query: 1 VAAGMLIPHT 10
V AG+ +PH+
Sbjct: 125 VDAGLNVPHS 134


>sp|RL18_THEGJ|LARGE ribosomal subunit protein uL18|Thermococcus gammatolerans (strain

Query: 1 VAAGMLIPHT 10
V AG+ +PH+
Sbjct: 125 VDAGLNVPHS 134


>sp|AMPPA_PYRAB|AMP phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 2 AAGMLIPHT 10
AAG+ IP T
Sbjct: 184 AAGLTIPKT 192


>sp|RL18_THESM|LARGE ribosomal subunit protein uL18|Thermococcus sibiricus (strain DSM

Query: 1 VAAGMLIPHT 10
V AG+ +PH+
Sbjct: 125 VDAGLNVPHS 134


>sp|RL18_THEKO|LARGE ribosomal subunit protein uL18|Thermococcus kodakarensis (strain

Query: 1 VAAGMLIPHT 10
V AG+ +PH+
Sbjct: 125 VDAGLNVPHS 134


>sp|AMPPA_PYRHO|AMP phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 AAGMLIPHT 10
AAG+ IP T
Sbjct: 184 AAGLTIPKT 192




11|Sequence|51|60|LIPHTYPDTP

>sp|PUR2_METMJ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LIPHTYPDTP 10
L+P YPD P
Sbjct: 335 LVPEGYPDAP 344


>sp|PUR2_METJA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LIPHTYPDTP 10
++P YPD P
Sbjct: 344 VVPKGYPDNP 353


>sp|PUR2_METLZ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LIPHTYPDTP 10
++P YPD P
Sbjct: 334 IVPMDYPDKP 343


>sp|ACDG_METJA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanocaldococcus

Query: 1 LIPHTYPD 8
L PHTYP+
Sbjct: 238 LEPHTYPE 245


>sp|PUR2_METAC|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IPHTYPDTP 10
+P YPD P
Sbjct: 340 VPAGYPDNP 348


>sp|PUR2_METMA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IPHTYPDTP 10
+P YPD P
Sbjct: 340 VPAGYPDNP 348


>sp|Y1940_AERPE|UNCHARACTERIZED protein APE_1940.1|Aeropyrum pernix (strain ATCC 700893

Query: 5 TYPDTP 10
TYPD+P
Sbjct: 130 TYPDSP 135


>sp|PUR2_METBU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 IPHTYPDTP 10
+P YPD P
Sbjct: 337 VPAGYPDEP 345


>sp|PUR2_METAR|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LIPHTYPDTP 10
++P YPD P
Sbjct: 337 VVPAGYPDNP 346


>sp|Y038_METJA|UNCHARACTERIZED protein MJ0038|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IPHTYPDTP 10
+P+ YPD P
Sbjct: 35 LPYGYPDKP 43


>sp|FENR_PICTO|FERREDOXIN--NADP reductase|Picrophilus torridus (strain ATCC 700027

Query: 2 IPHTYPDTP 10
IP YP+ P
Sbjct: 42 IPELYPEKP 50


>sp|PUR2_METB6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoregula boonei (strain DSM 21154

Query: 1 LIPHTYPDTP 10
L+P YP P
Sbjct: 333 LVPEGYPSAP 342


>sp|Y977_METKA|UNCHARACTERIZED glycosyltransferase MK0977|Methanopyrus kandleri (strain AV19 /

Query: 1 LIPHTYPDT 9
LIP TY DT
Sbjct: 138 LIPDTYDDT 146


>sp|LYSY_PYRAE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 PHTYPD 8
PH YPD
Sbjct: 117 PHPYPD 122


>sp|LYSY_PYRCJ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 PHTYPD 8
PH YPD
Sbjct: 118 PHPYPD 123


>sp|LYSY_CALMQ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 PHTYPD 8
PH YPD
Sbjct: 120 PHPYPD 125


>sp|LYSY_PYRNV|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 PHTYPD 8
PH YPD
Sbjct: 118 PHPYPD 123


>sp|LYSY_PYRIL|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 PHTYPD 8
PH YPD
Sbjct: 118 PHPYPD 123


>sp|GVPE2_HALSA|TRANSCRIPTIONAL activator GvpE2|Halobacterium salinarum (strain ATCC 700922

Query: 3 PHTYPDTP 10
PH Y DTP
Sbjct: 50 PHHYTDTP 57


>sp|DPS_HALSA|DNA protection during starvation protein|Halobacterium salinarum

Query: 2 IPHTYPDT 9
+PH P+T
Sbjct: 91 VPHASPET 98


>sp|SAT_STAMF|SULFATE adenylyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 1 LIPHTYPDT 9
LI H YPD
Sbjct: 240 LIKHYYPDN 248


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 IPHTYPD 8
I H YPD
Sbjct: 276 ITHAYPD 282


>sp|PNPH_ARCFU|PROBABLE 6-oxopurine nucleoside phosphorylase|Archaeoglobus fulgidus (strain

Query: 1 LIPHTYPD 8
+IPH Y D
Sbjct: 96 IIPHDYID 103


>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 IPHTYPD 8
I H YPD
Sbjct: 276 ITHAYPD 282


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 IPHTYPD 8
I H YPD
Sbjct: 276 ITHAYPD 282


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 IPHTYPD 8
I H YPD
Sbjct: 276 ITHAYPD 282


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 IPHTYPD 8
I H YPD
Sbjct: 293 ITHMYPD 299


>sp|PUR2_METS3|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LIPHTYPDT 9
++P YP+T
Sbjct: 336 IVPDGYPET 344


>sp|APGM_THEGJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus gammatolerans (strain DSM

Query: 5 TYPDTP 10
TYPD P
Sbjct: 229 TYPDIP 234


>sp|KCY_THESM|CYTIDYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 2 IPHTYPD 8
I H YPD
Sbjct: 174 IDHLYPD 180


>sp|HDRB2_METJA|COB--COM heterodisulfide reductase subunit B|Methanocaldococcus jannaschii

Query: 1 LIPHTYP 7
++PH YP
Sbjct: 10 IMPHRYP 16


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 IPHTYPD 8
I H YPD
Sbjct: 276 ITHAYPD 282


>sp|APGM_THEKO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus kodakarensis (strain ATCC

Query: 5 TYPDTP 10
TYPD P
Sbjct: 229 TYPDIP 234


>sp|RRP42_ARCFU|EXOSOME complex component Rrp42|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 YPDTP 10
YPDTP
Sbjct: 70 YPDTP 74


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 2 IPHTYPDTP 10
+ TYP TP
Sbjct: 34 VASTYPGTP 42


>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 IPHTYPD 8
I H YPD
Sbjct: 289 ITHQYPD 295


>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LIPHTYP 7
++P+TYP
Sbjct: 222 IMPYTYP 228


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter

Query: 2 IPHTYPDTP 10
+ TYP TP
Sbjct: 34 VASTYPGTP 42


>sp|FPRA_METJA|COENZYME F420H(2) oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LIPHTYPDT 9
LI +TYP T
Sbjct: 51 LIDNTYPGT 59




12|Sequence|56|65|YPDTPIHTQK

>sp|UPP_AERPE|URACIL phosphoribosyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YPDTPIHT 8
Y DTPI+T
Sbjct: 178 YGDTPIYT 185


>sp|Y1304_METJA|PUTATIVE toxin MJ1304|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YPDTPIHTQK 10
YPD+ H+Q+
Sbjct: 34 YPDSVYHSQQ 43


>sp|RNJ_PYRAB|RIBONUCLEASE J|Pyrococcus abyssi (strain GE5 /

Query: 1 YPDTPIH 7
YPD PI+
Sbjct: 100 YPDVPIY 106


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 YPDTPIH 7
YP++P+H
Sbjct: 48 YPNSPMH 54


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PDTPIHTQ 9
PD P+H +
Sbjct: 360 PDNPLHKE 367


>sp|TRUD_METBU|PROBABLE tRNA pseudouridine synthase D|Methanococcoides burtonii (strain DSM

Query: 1 YPDTPIHTQK 10
YPD P TQ+
Sbjct: 207 YPDEPEDTQE 216


>sp|GLCV_SACS2|GLUCOSE import ATP-binding protein GlcV|Saccharolobus solfataricus (strain

Query: 1 YPDTPIHT 8
Y D PIH+
Sbjct: 327 YSDHPIHS 334


>sp|Y310_ARCFU|UNCHARACTERIZED protein AF_0310|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YPDTPIHTQK 10
YP+TP H K
Sbjct: 89 YPETPEHNLK 98


>sp|AOCD_METKA|ORNITHINE cyclodeaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 YPDTPIHTQK 10
Y P+HTQ+
Sbjct: 73 YGAVPVHTQE 82


>sp|RPO3_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo3|Aeropyrum pernix (strain ATCC 700893

Query: 1 YPDTPI 6
YP+TP+
Sbjct: 134 YPETPL 139


>sp|THIOL_METTH|ACETYL-COA acetyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 YPDTPIHTQ 9
Y DTP++ +
Sbjct: 227 YTDTPVYVK 235


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PDTPIH 7
PDTPI+
Sbjct: 1030 PDTPIN 1035


>sp|CCA_AERPE|CCA-ADDING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 YPDTPI 6
YPD+PI
Sbjct: 236 YPDSPI 241


>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 2 PDTPIH 7
PD P+H
Sbjct: 222 PDRPVH 227


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 YPDTPIH 7
YP++P H
Sbjct: 48 YPNSPFH 54


>sp|UPP_PYRAR|URACIL phosphoribosyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 YPDTPIHT 8
+PDT I+T
Sbjct: 177 WPDTEIYT 184


>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 YPDTPIHT 8
YP+ PI T
Sbjct: 126 YPEEPIET 133


>sp|AATB_PYRCJ|A-TYPE ATP synthase subunit B|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 YPDTPIHT 8
YP+ PI T
Sbjct: 126 YPEEPIET 133


>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PDTPIH 7
PD P+H
Sbjct: 222 PDRPVH 227


>sp|AATB_PYRAR|A-TYPE ATP synthase subunit B|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 YPDTPIHT 8
YP+ PI T
Sbjct: 126 YPEEPIET 133


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 1 YPDTPIHT 8
YP+ PI T
Sbjct: 126 YPEEPIET 133


>sp|AATB_PYRAE|A-TYPE ATP synthase subunit B|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YPDTPIHT 8
YP+ PI T
Sbjct: 126 YPEEPIET 133


>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PDTPIH 7
PD PIH
Sbjct: 107 PDGPIH 112


>sp|IF2G_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 YPDTPIH 7
Y DTPI+
Sbjct: 53 YADTPIY 59


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YPDTPIH 7
YP++P H
Sbjct: 37 YPNSPFH 43


>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PDTPIH 7
PD P+H
Sbjct: 218 PDRPVH 223


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YPDTPIH 7
YP++P H
Sbjct: 36 YPNSPFH 42


>sp|CARA_SULAC|CARBAMOYL phosphate synthase small chain|Sulfolobus acidocaldarius (strain

Query: 3 DTPIHTQ 9
D PIHT+
Sbjct: 313 DVPIHTR 319


>sp|ATGT_PYRFU|TRNA-GUANINE(15) transglycosylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PDTPIH 7
PD P+H
Sbjct: 222 PDRPVH 227


>sp|TIAS_HYPBU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Hyperthermus butylicus (strain

Query: 2 PDTPIHT 8
P TPIH+
Sbjct: 418 PSTPIHS 424




13|Sequence|61|70|IHTQKQWFRE

>sp|Y606_METJA|UNCHARACTERIZED protein MJ0606|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TQKQWF 8
TQKQW
Sbjct: 63 TQKQWL 68


>sp|COFD_METB6|2-PHOSPHO-L-LACTATE transferase|Methanoregula boonei (strain DSM 21154

Query: 1 IHTQKQWFR 9
IH Q+ W R
Sbjct: 146 IHYQEYWIR 154


>sp|COFD_METPE|2-PHOSPHO-L-LACTATE transferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 IHTQKQWFR 9
IH Q+ W R
Sbjct: 146 IHFQEYWIR 154


>sp|COFD_METHJ|2-PHOSPHO-L-LACTATE transferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 IHTQKQWFR 9
IH Q+ W R
Sbjct: 146 IHFQEYWVR 154


>sp|PIMT_HYPBU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 5 KQWFRE 10
++WFRE
Sbjct: 8 EEWFRE 13


>sp|OGG1_METS5|8-OXOGUANINE DNA glycosylase/AP lyase|Metallosphaera sedula (strain ATCC 51363

Query: 3 TQKQWFRE 10
+++ WFRE
Sbjct: 29 SERVWFRE 36


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 2 HTQKQWFRE 10
HT WFR+
Sbjct: 584 HTVGHWFRK 592


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IHTQKQWF 8
I +KQWF
Sbjct: 344 IFIEKQWF 351


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IHTQKQWF 8
I +KQWF
Sbjct: 344 IFIEKQWF 351


>sp|SEPS_ARCFU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IHTQKQWFRE 10
+H +KQ+ RE
Sbjct: 77 VHVKKQFGRE 86




14|Sequence|66|75|QWFRETFNHL

>sp|ASSY_SULAC|ARGININOSUCCINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QWFRETFN 8
+W RETFN
Sbjct: 18 RWLRETFN 25


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 1 QWFRETFN 8
+WFR TF+
Sbjct: 24 EWFRRTFD 31


>sp|ASSY_SULTO|ARGININOSUCCINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QWFRETFN 8
+W +ETFN
Sbjct: 18 RWLKETFN 25


>sp|PURL_CALMQ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 WFRETFNH 9
WF E+FN+
Sbjct: 154 WFDESFNN 161


>sp|MRE11_NANEQ|DNA double-strand break repair protein|Nanoarchaeum equitans (strain

Query: 2 WFRETFNH 9
W +E+F+H
Sbjct: 89 WLKESFDH 96


>sp|K6PF_PYRFU|ADP-SPECIFIC phosphofructokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QWFRETFNH 9
QWF +TF +
Sbjct: 83 QWFDKTFKY 91


>sp|MCH_HALMA|MESACONYL-COA hydratase|Haloarcula marismortui (strain ATCC 43049

Query: 1 QWFRETFNH 9
QW +T NH
Sbjct: 58 QWMGQTLNH 66


>sp|Y434_METJA|GAMMA-GLUTAMYLCYCLOTRANSFERASE and putative RNase MJ0434|Methanocaldococcus jannaschii (strain

Query: 3 FRETFNHL 10
FRE +NH+
Sbjct: 59 FREKYNHI 66


>sp|MCH_HALHT|MESACONYL-COA hydratase|Haloarcula hispanica (strain ATCC 33960

Query: 1 QWFRETFNH 9
QW +T NH
Sbjct: 58 QWMGQTLNH 66


>sp|CDC6C_HALMA|ORC1-TYPE DNA replication protein 3|Haloarcula marismortui (strain ATCC

Query: 2 WFRETFNH 9
W ETF H
Sbjct: 27 WLPETFKH 34


>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QWFRETFNHL 10
W RETF +
Sbjct: 303 HWVRETFQKV 312


>sp|CDPAS_HALMA|CDP-ARCHAEOL synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 WFRETF 7
WF ETF
Sbjct: 143 WFTETF 148


>sp|RF1_SACS2|PEPTIDE chain release factor subunit|Saccharolobus solfataricus (strain

Query: 1 QWFRETFN 8
+W ++TFN
Sbjct: 351 EWVKKTFN 358


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 WFRETFN 8
WFR+T N
Sbjct: 975 WFRDTDN 981


>sp|HMDH_PYRAB|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus abyssi (strain GE5 /

Query: 1 QWFRETFNHL 10
+W +E N+L
Sbjct: 149 EWVKENLNYL 158


>sp|KAD6_METS5|PUTATIVE adenylate kinase|Metallosphaera sedula (strain ATCC 51363

Query: 1 QWFRET 6
+WF+ET
Sbjct: 130 EWFKET 135


>sp|K6PF_PYRHO|ADP-SPECIFIC phosphofructokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QWFRETFNH 9
+WF +TF +
Sbjct: 81 EWFDKTFRY 89


>sp|RF1_AERPE|PEPTIDE chain release factor subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 QWFRETFNHL 10
+WF +TF L
Sbjct: 353 EWFLKTFGGL 362


>sp|CDPAS_METBF|CDP-ARCHAEOL synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QWFRETFNH 9
+WF F H
Sbjct: 136 EWFVSNFTH 144


>sp|METK_SULAC|S-ADENOSYLMETHIONINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WFRETFNHL 10
W +E F +L
Sbjct: 119 WIKENFRYL 127


>sp|ASSY_SACS2|ARGININOSUCCINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QWFRETF 7
+W +ETF
Sbjct: 18 RWLKETF 24


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 QWFRETFNHL 10
+WF FN L
Sbjct: 726 KWFLSKFNRL 735


>sp|OGG1_METTH|PROBABLE N-glycosylase/DNA lyase|Methanothermobacter thermautotrophicus

Query: 2 WFRETFNHL 10
W R NH+
Sbjct: 256 WIRRIMNHI 264


>sp|TDXH_NANEQ|PEROXIREDOXIN equitans (strain Kin4-M)

Query: 1 QWFRETFN 8
+W +E FN
Sbjct: 81 EWIKEKFN 88




15|Sequence|71|80|TFNHLFAIAN

>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TFNHLFAIAN 10
T HL AIAN
Sbjct: 270 TVLHLMAIAN 279


>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NHLFAI 8
NHLFA+
Sbjct: 112 NHLFAL 117




16|Sequence|76|85|FAIANSAEAG

***** No hits found ******


17|Sequence|81|90|SAEAGDAGVH

>sp|GLCDH_SACSO|GLUCOSE 1-dehydrogenase|Saccharolobus solfataricus (Sulfolobus

Query: 1 SAEAGDAGVH 10
+ E G+AG+H
Sbjct: 109 TGEFGEAGIH 118


>sp|GLCD1_SACS2|GLUCOSE 1-dehydrogenase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SAEAGDAGVH 10
+ E G+AG+H
Sbjct: 109 TGEFGEAGIH 118


>sp|SYFB_THEPD|PHENYLALANINE--TRNA ligase beta subunit|Thermofilum pendens (strain DSM 2475

Query: 2 AEAGDAGV 9
EAGDAG+
Sbjct: 510 TEAGDAGI 517


>sp|METK_PYRFU|S-ADENOSYLMETHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SAEAGDAG 8
SAEAGD G
Sbjct: 275 SAEAGDDG 282


>sp|METK_PYRHO|S-ADENOSYLMETHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SAEAGDAG 8
SAEAGD G
Sbjct: 275 SAEAGDDG 282


>sp|METK_PYRAB|S-ADENOSYLMETHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 SAEAGDAG 8
SAEAGD G
Sbjct: 275 SAEAGDDG 282


>sp|METK_THEON|S-ADENOSYLMETHIONINE synthase|Thermococcus onnurineus (strain NA1)

Query: 1 SAEAGDAG 8
SAEAGD G
Sbjct: 278 SAEAGDDG 285


>sp|METK_THEKO|S-ADENOSYLMETHIONINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SAEAGDAG 8
SAEAGD G
Sbjct: 278 SAEAGDDG 285


>sp|METK_THEGJ|S-ADENOSYLMETHIONINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 SAEAGDAG 8
SAEAGD G
Sbjct: 278 SAEAGDDG 285


>sp|PELO_NATPD|PROTEIN pelota homolog|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SAEAGDAGVH 10
+A GD GVH
Sbjct: 227 TASVGDRGVH 236


>sp|PELO_HALLT|PROTEIN pelota homolog|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 AGDAGVH 10
AGD GVH
Sbjct: 230 AGDRGVH 236


>sp|RL30_HALWD|LARGE ribosomal subunit protein uL30|Haloquadratum walsbyi (strain DSM

Query: 1 SAEAGDAGVH 10
+AE G GVH
Sbjct: 132 TAEGGQIGVH 141


>sp|PYRH_PYRHO|URIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SAEAGDAGV 9
S EAG AGV
Sbjct: 172 SREAGKAGV 180


>sp|PELO_HALWD|PROTEIN pelota homolog|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SAEAGDAGVH 10
+A GD GVH
Sbjct: 227 TAAVGDRGVH 236




18|Sequence|86|95|DAGVHLVSGW

>sp|FBPAP_THEON|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus onnurineus (strain NA1)

Query: 5 HLVSGW 10
HLVSGW
Sbjct: 267 HLVSGW 272


>sp|FBPAP_THEKO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 HLVSGW 10
HLVSGW
Sbjct: 267 HLVSGW 272


>sp|FBPAP_IGNH4|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 HLVSGW 10
HLV+GW
Sbjct: 259 HLVAGW 264


>sp|EF2_NATPD|ELONGATION factor 2|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DAGVHLVSG 9
D G HL+SG
Sbjct: 429 DTGEHLISG 437


>sp|EF2_HALSA|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 DAGVHLVSG 9
D G HL+SG
Sbjct: 428 DTGEHLISG 436


>sp|EF2_HALS3|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 29341

Query: 1 DAGVHLVSG 9
D G HL+SG
Sbjct: 428 DTGEHLISG 436


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 DAGVHLVSG 9
D G HL+SG
Sbjct: 429 DTGEHLISG 437


>sp|EF2_HALMA|ELONGATION factor 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 DAGVHLVSG 9
D G HL+SG
Sbjct: 428 DTGEHLISG 436


>sp|FBPAP_METTM|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanothermobacter marburgensis (strain ATCC

Query: 5 HLVSGW 10
HLV GW
Sbjct: 258 HLVGGW 263


>sp|HIS1_HALMA|ATP phosphoribosyltransferase|Haloarcula marismortui (strain ATCC

Query: 2 AGVHLVSG 9
AG+HLV G
Sbjct: 22 AGLHLVDG 29


>sp|FBPAP_SULTO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 HLVSGW 10
HLV GW
Sbjct: 258 HLVPGW 263


>sp|FBPAP_PYRNV|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 HLVSGW 10
HLV GW
Sbjct: 259 HLVHGW 264


>sp|ILVC_PYRAB|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus abyssi (strain GE5 /

Query: 1 DAGVHLVSG 9
D+GVH++ G
Sbjct: 41 DSGVHVILG 49


>sp|ILVC_PYRFU|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DAGVHLVSG 9
D+GVH++ G
Sbjct: 41 DSGVHVILG 49


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 1 DAGVHLVSG 9
+ G HLVSG
Sbjct: 951 ETGQHLVSG 959


>sp|EF2_METS3|ELONGATION factor 2|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DAGVHLVSG 9
+ G HLVSG
Sbjct: 429 ETGEHLVSG 437


>sp|NITR_PYRAB|NITRILASE abyssi (strain GE5 /

Query: 1 DAGVHLVSG 9
D GV++V+G
Sbjct: 78 DTGVYIVAG 86


>sp|GLYA_METPE|SERINE hydroxymethyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 DAGVHLVSG 9
+AG+ LVSG
Sbjct: 299 EAGLRLVSG 307


>sp|FAEHP_METAR|BIFUNCTIONAL enzyme Fae/Hps|Methanocella arvoryzae (strain DSM 22066

Query: 1 DAGVHLVSGW 10
D GVH + G+
Sbjct: 155 DRGVHAIMGY 164


>sp|DEOC_METTH|DEOXYRIBOSE-PHOSPHATE aldolase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 GVHLVSGW 10
GV ++ GW
Sbjct: 216 GVQIIEGW 223


>sp|FBPAP_METJA|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 AGVHLVSGW 10
A H V GW
Sbjct: 260 ANPHFVPGW 268


>sp|GLYA_HALWD|SERINE hydroxymethyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DAGVHLVSG 9
DAG+ +VSG
Sbjct: 300 DAGLSVVSG 308


>sp|EF2_THEVO|ELONGATION factor 2|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DAGVHLVSG 9
+ G HL+SG
Sbjct: 427 ETGEHLISG 435


>sp|EF2_THEAC|ELONGATION factor 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DAGVHLVSG 9
+ G HL+SG
Sbjct: 427 ETGEHLISG 435


>sp|EF2_PICTO|ELONGATION factor 2|Picrophilus torridus (strain ATCC 700027

Query: 1 DAGVHLVSG 9
+ G HL+SG
Sbjct: 427 ETGEHLISG 435


>sp|EF2_METVS|ELONGATION factor 2|Methanococcus vannielii (strain ATCC 35089

Query: 1 DAGVHLVSG 9
+ G HL+SG
Sbjct: 430 ETGEHLISG 438


>sp|EF2_METTH|ELONGATION factor 2|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DAGVHLVSG 9
+ G HL+SG
Sbjct: 429 ETGEHLISG 437


>sp|EF2_METPE|ELONGATION factor 2|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 DAGVHLVSG 9
+ G HL+SG
Sbjct: 429 ETGEHLISG 437


>sp|EF2_METMP|ELONGATION factor 2|Methanococcus maripaludis (strain DSM 14266

Query: 1 DAGVHLVSG 9
+ G HL+SG
Sbjct: 430 ETGEHLISG 438


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DAGVHLVSG 9
+ G HL+SG
Sbjct: 429 ETGEHLISG 437


>sp|EF2_METM7|ELONGATION factor 2|Methanococcus maripaludis (strain C7 /

Query: 1 DAGVHLVSG 9
+ G HL+SG
Sbjct: 430 ETGEHLISG 438


>sp|EF2_METM6|ELONGATION factor 2|Methanococcus maripaludis (strain C6 /

Query: 1 DAGVHLVSG 9
+ G HL+SG
Sbjct: 430 ETGEHLISG 438


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 1 DAGVHLVSG 9
+ G HL+SG
Sbjct: 430 ETGEHLISG 438


>sp|EF2_METB6|ELONGATION factor 2|Methanoregula boonei (strain DSM 21154

Query: 1 DAGVHLVSG 9
+ G HL+SG
Sbjct: 429 ETGEHLISG 437


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DAGVHLVSG 9
+ G HL+SG
Sbjct: 430 ETGEHLISG 438


>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DAGVHLVSG 9
+ G HL+SG
Sbjct: 426 ETGEHLISG 434


>sp|FSX1_HALS0|FUSEXIN 1|Haloferax sp. (strain Q22)

Query: 1 DAGVHLVSGW 10
D G+ ++GW
Sbjct: 96 DTGLESITGW 105




19|Sequence|91|100|LVSGWQIFQS

>sp|HIS4_METKA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanopyrus kandleri (strain

Query: 1 LVSGWQ 6
LVSGW+
Sbjct: 140 LVSGWK 145


>sp|AGL10_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl10|Haloferax volcanii

Query: 1 LVSGWQIFQ 9
L+SGW + +
Sbjct: 268 LISGWMVVR 276


>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VSGWQIFQS 10
+SGW+I+ S
Sbjct: 323 MSGWEIWIS 331


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VSGWQIFQS 10
+SGW+I+ S
Sbjct: 323 MSGWEIWIS 331


>sp|DHE4_HALSI|NADP-SPECIFIC glutamate dehydrogenase A1|Halobacterium salinarum (Halobacterium

Query: 2 VSGWQIFQS 10
+SGW ++++
Sbjct: 86 LSGWMVYKT 94


>sp|DHE4_HALSA|NADP-SPECIFIC glutamate dehydrogenase A1|Halobacterium salinarum (strain ATCC

Query: 2 VSGWQIFQS 10
+SGW ++++
Sbjct: 86 LSGWMVYKT 94


>sp|Y1412_METJA|UPF0288 protein MJ1412|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LVSGWQIF 8
L GW+IF
Sbjct: 189 LEDGWRIF 196


>sp|CBIM_HALS3|PUTATIVE cobalt transport protein CbiM|Halobacterium salinarum (strain ATCC

Query: 2 VSGWQIFQS 10
V+GW +F++
Sbjct: 121 VAGWVVFRA 129


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LVSGWQIFQS 10
LVSGW+ + S
Sbjct: 1002 LVSGWRDYIS 1011


>sp|HIS4_METLZ|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanocorpusculum labreanum

Query: 2 VSGWQ 6
VSGWQ
Sbjct: 137 VSGWQ 141




20|Sequence|96|105|QIFQSTPTEE

>sp|NADK_METBF|NAD kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QIFQSTPTEE 10
QIF +TPT E
Sbjct: 33 QIFVATPTAE 42


>sp|KPRS_METAC|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IFQSTPTE 9
I QSTPT+
Sbjct: 52 IIQSTPTD 59


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IFQSTPTEE 10
IF+ TP EE
Sbjct: 355 IFERTPFEE 363


>sp|KPRS_METMA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IFQSTPTE 9
+ QSTPT+
Sbjct: 64 LIQSTPTD 71


>sp|GLME_HALMA|GLUTAMATE mutase epsilon subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 QIFQSTPTEE 10
Q FQ PT+E
Sbjct: 321 QEFQGVPTKE 330




21|Sequence|101|110|TPTEEVPFWA

>sp|Y2341_ARCFU|UNCHARACTERIZED protein AF_2341|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PTEEVPFWA 10
P EEV FWA
Sbjct: 95 PPEEVFFWA 103


>sp|REG5_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH1055|Pyrococcus horikoshii

Query: 5 EVPFW 9
EVPFW
Sbjct: 150 EVPFW 154


>sp|KDPA_THEVO|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Thermoplasma volcanium (strain

Query: 2 PTEEVPFWA 10
P E+V FW+
Sbjct: 4 PAEDVYFWS 12


>sp|KPRS1_ARCFU|RIBOSE-PHOSPHATE pyrophosphokinase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PTEEVPFWA 10
P E+ FWA
Sbjct: 162 PDEKAAFWA 170


>sp|RS13_METMJ|SMALL ribosomal subunit protein uS13|Methanoculleus marisnigri (strain

Query: 1 TPTEEVPFW 9
T TE+VP W
Sbjct: 70 TYTEQVPDW 78


>sp|UPPP_HALMA|UNDECAPRENYL-DIPHOSPHATASE marismortui (strain ATCC 43049

Query: 3 TEEVPFWA 10
+VPFWA
Sbjct: 245 VRQVPFWA 252


>sp|ACEB_HALVD|MALATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 TPTEEVPFW 9
TPT E+P W
Sbjct: 201 TPTGELPAW 209


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 TPTEEVPFW 9
TPTEE+ +W
Sbjct: 152 TPTEEI-YW 159


>sp|RL10_HALSA|LARGE ribosomal subunit protein uL10|Halobacterium salinarum (strain

Query: 3 TEEVPFW 9
TEEVP W
Sbjct: 9 TEEVPEW 15


>sp|RL10_HALS3|LARGE ribosomal subunit protein uL10|Halobacterium salinarum (strain

Query: 3 TEEVPFW 9
TEEVP W
Sbjct: 9 TEEVPEW 15


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PTEEVP 7
PTEE+P
Sbjct: 757 PTEELP 762


>sp|SYDND_ARCFU|ASPARTATE--TRNA(ASP/ASN) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PTEEVPFWA 10
PTE PF+A
Sbjct: 324 PTESKPFYA 332


>sp|IF5A_THEVO|TRANSLATION initiation factor 5A|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PTEEVPFW 9
P EVP+W
Sbjct: 110 PGMEVPYW 117


>sp|IF5A_THEAC|TRANSLATION initiation factor 5A|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PTEEVPFW 9
P EVP+W
Sbjct: 110 PGMEVPYW 117


>sp|IF5A_PICTO|TRANSLATION initiation factor 5A|Picrophilus torridus (strain ATCC 700027

Query: 2 PTEEVPFW 9
P EVP+W
Sbjct: 110 PGMEVPYW 117


>sp|SYW2_HALSA|TRYPTOPHAN--TRNA ligase 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 PTEEVPF 8
P E+VPF
Sbjct: 293 PAEDVPF 299


>sp|MPGS_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TPTEEVPFW 9
T TEEVP +
Sbjct: 28 TETEEVPIY 36


>sp|HIS4_METTH|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanothermobacter

Query: 3 TEEVPFWA 10
TE+VPF A
Sbjct: 141 TEKVPFTA 148


>sp|SYDND_METBU|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 PTEEVPFWA 10
PTE PF+A
Sbjct: 337 PTEIKPFYA 345


>sp|SYDND_METMA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PTEEVPFWA 10
PTE PF+A
Sbjct: 338 PTEIKPFYA 346


>sp|SYDND_METAC|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PTEEVPFWA 10
PTE PF+A
Sbjct: 338 PTEIKPFYA 346


>sp|SYDND_METBF|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PTEEVPFWA 10
PTE PF+A
Sbjct: 338 PTEIKPFYA 346


>sp|AMASY_HALMA|APPARENT malate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 TPTEEVPFW 9
TPT E+P W
Sbjct: 202 TPTGELPPW 210




22|Sequence|106|115|VPFWADVVLG

>sp|PSB2_CENSY|PROTEASOME subunit beta 2|Cenarchaeum symbiosum (strain A)

Query: 2 PFWADVVLG 10
PF AD+++G
Sbjct: 106 PFMADILMG 114


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 1 VPFWAD 6
VPFW D
Sbjct: 427 VPFWKD 432


>sp|METXA_METMS|HOMOSERINE O-acetyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 2 PFWADVVLG 10
P W D+V+G
Sbjct: 71 PGWWDIVIG 79


>sp|PSB2_NITMS|PROTEASOME subunit beta 2|Nitrosopumilus maritimus (strain SCM1)

Query: 2 PFWADVVLG 10
PF AD+++G
Sbjct: 106 PFMADILVG 114


>sp|PSB2_THEPD|PROTEASOME subunit beta 2|Thermofilum pendens (strain DSM 2475

Query: 2 PFWADVVLG 10
P++A++V+G
Sbjct: 99 PYYAEIVVG 107


>sp|METXA_METEZ|HOMOSERINE O-acetyltransferase|Methanohalobium evestigatum (strain ATCC

Query: 2 PFWADVVLG 10
P W D+++G
Sbjct: 71 PGWWDIIIG 79


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 FWADVVLG 10
FW VVLG
Sbjct: 540 FWDYVVLG 547


>sp|THI4_METBU|THIAMINE thiazole synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 PFWADV 7
P WADV
Sbjct: 198 PMWADV 203


>sp|UPPP_HALMA|UNDECAPRENYL-DIPHOSPHATASE marismortui (strain ATCC 43049

Query: 1 VPFWA 5
VPFWA
Sbjct: 248 VPFWA 252


>sp|UPPP_METMP|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain DSM 14266

Query: 1 VPFWADVVLG 10
+P+W +++G
Sbjct: 135 IPYWDALIIG 144


>sp|SURE_METHJ|5'-NUCLEOTIDASE SurE|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 WADVVL 9
WADVV+
Sbjct: 46 WADVVV 51


>sp|MTRC_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanopyrus kandleri (strain AV19 /

Query: 1 VPFWADVVLG 10
VP WA ++G
Sbjct: 106 VPAWAAAIIG 115


>sp|ASSY_PYRAE|ARGININOSUCCINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PFWADVV 8
P WAD+V
Sbjct: 305 PQWADLV 311




23|Sequence|111|120|DVVLGFRKMT

>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 1 DVVLGFRKMT 10
DV+ G+RK+T
Sbjct: 202 DVIKGYRKLT 211


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DVVLGFRKMT 10
DVVL F +MT
Sbjct: 72 DVVLRFYRMT 81


>sp|AATF_THEAC|A-TYPE ATP synthase subunit F|Thermoplasma acidophilum (strain ATCC

Query: 1 DVVLGFR 7
DVVLGFR
Sbjct: 12 DVVLGFR 18


>sp|AATF_THEVO|A-TYPE ATP synthase subunit F|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DVVLGFR 7
DVVLGFR
Sbjct: 12 DVVLGFR 18


>sp|ILVC_METAR|KETOL-ACID reductoisomerase (NADP(+))|Methanocella arvoryzae (strain DSM

Query: 1 DVVLGFRK 8
DVV+G RK
Sbjct: 42 DVVVGLRK 49


>sp|IF2P_SULTO|PROBABLE translation initiation factor IF-2|Sulfurisphaera tokodaii (strain

Query: 1 DVVLGFRKMT 10
DVV GF+K T
Sbjct: 109 DVVEGFQKQT 118


>sp|ILVC_METB6|KETOL-ACID reductoisomerase (NADP(+))|Methanoregula boonei (strain DSM 21154

Query: 1 DVVLGFRK 8
DV++G RK
Sbjct: 42 DVIIGLRK 49


>sp|RL35A_AERPE|LARGE ribosomal subunit protein eL33|Aeropyrum pernix (strain ATCC

Query: 2 VVLGFRKMT 10
VVLG+R+ T
Sbjct: 7 VVLGYRRGT 15


>sp|ACDE1_METAC|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina

Query: 2 VVLGFRK 8
+VLGF+K
Sbjct: 112 IVLGFKK 118


>sp|QUEC_PYRAB|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 DVVLGFRK 8
D+++GF K
Sbjct: 127 DIIVGFNK 134


>sp|AATF_METMP|A-TYPE ATP synthase subunit F|Methanococcus maripaludis (strain DSM

Query: 1 DVVLGFR 7
DVV GFR
Sbjct: 10 DVVAGFR 16


>sp|QUEC_PYRHO|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DVVLGFRK 8
D+++GF K
Sbjct: 127 DIIVGFNK 134




24|Sequence|116|125|FRKMTEAELK

>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FRKMTEAELK 10
FRK+TE E+K
Sbjct: 536 FRKITEEEVK 545


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 FRKMTEAELK 10
FRK++E ELK
Sbjct: 541 FRKISEEELK 550


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FRKMTEAELK 10
FRK TE E+K
Sbjct: 533 FRKFTEEEVK 542


>sp|COOS1_METMA|CARBON monoxide dehydrogenase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FRKMTEAE 8
F+KMTE E
Sbjct: 109 FKKMTEGE 116


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 FRKMTEAELK 10
FRK TE E+K
Sbjct: 531 FRKYTEEEVK 540


>sp|RL30_THEVO|LARGE ribosomal subunit protein uL30|Thermoplasma volcanium (strain

Query: 2 RKMTEAELK 10
RK+TE ELK
Sbjct: 76 RKLTEEELK 84


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 FRKMTEAELK 10
FRK+TE ++K
Sbjct: 536 FRKITEQDVK 545


>sp|ARGB_METJA|ACETYLGLUTAMATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RKMTEAELK 10
RK+T +ELK
Sbjct: 234 RKLTASELK 242


>sp|AROE_THEKO|SHIKIMATE dehydrogenase (NADP(+))|Thermococcus kodakarensis (strain ATCC

Query: 2 RKMTEAELK 10
R +TEAEL+
Sbjct: 222 RLLTEAELR 230


>sp|PSA_METMJ|PROTEASOME subunit alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FRKMTEAELK 10
FRKM + E+K
Sbjct: 223 FRKMEKDEVK 232




25|Sequence|121|130|EAELKKFPQY

>sp|SYC_PYRFU|CYSTEINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 ELKKFPQY 10
E+KKFP+Y
Sbjct: 144 EVKKFPEY 151


>sp|Y1797_METTH|PROBABLE S-adenosyl-L-methionine-binding protein

Query: 1 EAELKKFPQY 10
E+E+ FP+Y
Sbjct: 34 ESEIHIFPEY 43


>sp|HCP_METAR|HYDROXYLAMINE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 3 ELKKFPQY 10
ELKK+P +
Sbjct: 277 ELKKYPHF 284


>sp|CBID_ARCFU|COBALT-PRECORRIN-5B C(1)-methyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 KKFPQY 10
KKFP+Y
Sbjct: 225 KKFPEY 230


>sp|KPRS_THEKO|RIBOSE-PHOSPHATE pyrophosphokinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EAELKKFP 8
E E+K+FP
Sbjct: 24 EVEIKRFP 31


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 5 KKFPQY 10
KKFP+Y
Sbjct: 305 KKFPKY 310


>sp|HEM1_IGNH4|GLUTAMYL-TRNA reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EAELKKFPQY 10
EAEL KF +
Sbjct: 326 EAELNKFVNF 335


>sp|KPRS_PYRFU|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 AELKKFPQ 9
E+KKFP
Sbjct: 24 VEIKKFPD 31




26|Sequence|126|135|KFPQYVFGQA

>sp|COMC_METFV|L-SULFOLACTATE dehydrogenase|Methanothermus fervidus (strain ATCC 43054

Query: 1 KFPQYVFG 8
+FPQYV G
Sbjct: 48 RFPQYVEG 55


>sp|COMC_METTH|L-SULFOLACTATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 KFPQYVFG 8
+FPQYV G
Sbjct: 48 RFPQYVDG 55


>sp|DNAJ_HALLT|CHAPERONE protein DnaJ|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 FPQYVFG 8
FPQ VFG
Sbjct: 291 FPQAVFG 297


>sp|DNAJ_NATPD|CHAPERONE protein DnaJ|Natronomonas pharaonis (strain ATCC 35678

Query: 2 FPQYVFG 8
FPQ VFG
Sbjct: 285 FPQAVFG 291


>sp|Y089_SULAC|MEMO1 family protein Saci_0089|Sulfolobus acidocaldarius (strain ATCC

Query: 2 FPQYVFGQ 9
F QY+FGQ
Sbjct: 147 FLQYLFGQ 154


>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 2 FPQYVFG 8
FPQ VFG
Sbjct: 291 FPQAVFG 297


>sp|DNAJ_HALMA|CHAPERONE protein DnaJ|Haloarcula marismortui (strain ATCC 43049

Query: 2 FPQYVFG 8
FPQ VFG
Sbjct: 289 FPQAVFG 295


>sp|DNAJ_HALSA|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 700922

Query: 2 FPQYVFG 8
FPQ VFG
Sbjct: 296 FPQAVFG 302


>sp|DNAJ_HALS3|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 29341

Query: 2 FPQYVFG 8
FPQ VFG
Sbjct: 296 FPQAVFG 302


>sp|DNAJ_HALWD|CHAPERONE protein DnaJ|Haloquadratum walsbyi (strain DSM 16790

Query: 2 FPQYVFG 8
FPQ VFG
Sbjct: 292 FPQAVFG 298


>sp|Y963_METKA|MEMO1 family protein MK0963|Methanopyrus kandleri (strain AV19 /

Query: 2 FPQYVFGQA 10
F QYV+G++
Sbjct: 144 FLQYVYGES 152


>sp|COMC_METJA|L-SULFOLACTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KFPQYV 6
+FPQY+
Sbjct: 48 RFPQYI 53


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PQYVFG 8
P+Y+FG
Sbjct: 162 PRYIFG 167


>sp|CAS5_METJA|CRISPR-ASSOCIATED protein Cas5|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KFPQYVFGQ 9
+FP Y FG+
Sbjct: 11 RFPFYSFGK 19


>sp|PIMT_PYRFU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KFPQYVF 7
K+P+Y+F
Sbjct: 35 KYPRYLF 41


>sp|AROE_THEVO|SHIKIMATE dehydrogenase (NADP(+))|Thermoplasma volcanium (strain ATCC

Query: 3 PQYVFG 8
P YVFG
Sbjct: 4 PDYVFG 9


>sp|PIMT_PYRAB|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 KFPQYVF 7
K+P+Y+F
Sbjct: 31 KYPRYMF 37


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FPQYVFG 8
+P+Y++G
Sbjct: 25 YPRYIYG 31




27|Sequence|131|140|VFGQAFTTLK

>sp|TRPB_THEVO|TRYPTOPHAN synthase beta chain|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GQAFTTLK 10
G+AF TLK
Sbjct: 34 GEAFETLK 41


>sp|TRPB_THEAC|TRYPTOPHAN synthase beta chain|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 GQAFTTLK 10
G+AF TLK
Sbjct: 34 GEAFDTLK 41




28|Sequence|136|145|FTTLKCECPA

>sp|DCDB_METLZ|DCTP deaminase, dUMP-forming|Methanocorpusculum labreanum (strain ATCC

Query: 1 FTTLKCECP 9
+ T +CECP
Sbjct: 150 YVTKRCECP 158


>sp|MOBA_METJA|PROBABLE molybdenum cofactor guanylyltransferase|Methanocaldococcus

Query: 1 FTTLKCECP 9
F L C+CP
Sbjct: 98 FVVLPCDCP 106


>sp|CYAS_METPS|CYSTEATE synthase|Methanocella paludicola (strain DSM 17711

Query: 3 TLKCECPA 10
TL+CEC A
Sbjct: 20 TLRCECGA 27


>sp|TRPG_METTM|ANTHRANILATE synthase component 2|Methanothermobacter marburgensis (strain ATCC

Query: 1 FTTLKCEC 8
+ +L+CEC
Sbjct: 136 YHSLRCEC 143


>sp|HACB_METJA|METHANOGEN homoaconitase small subunit|Methanocaldococcus jannaschii (strain

Query: 3 TLKCECP 9
T+KCE P
Sbjct: 133 TIKCETP 139


>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LKCEC 8
LKCEC
Sbjct: 124 LKCEC 128


>sp|GATE_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfurisphaera tokodaii (strain DSM

Query: 4 LKCECP 9
L CECP
Sbjct: 27 LFCECP 32


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TLKCEC 8
TL CEC
Sbjct: 810 TLDCEC 815


>sp|HERA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 1 FTTLKCECP 9
+ T+K ECP
Sbjct: 211 YHTVKHECP 219


>sp|RS4E_SULTO|SMALL ribosomal subunit protein eS4|Sulfurisphaera tokodaii (strain DSM

Query: 1 FTTLKCECPA 10
TTLK E P+
Sbjct: 157 LTTLKIEIPS 166




29|Sequence|141|150|CECPAYLPWL

>sp|Y3680_PYRAE|UPF0282 protein PAE3680|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PAYLPW 9
P YLPW
Sbjct: 211 PTYLPW 216


>sp|ATGT_THEVO|TRNA-GUANINE(15) transglycosylase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 ECPAYLPW 9
EC A +PW
Sbjct: 415 ECNALIPW 422


>sp|K6PF_METAC|ADP-SPECIFIC phosphofructokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 AYLPWL 10
AY+PWL
Sbjct: 134 AYVPWL 139


>sp|IF2A_STAMF|TRANSLATION initiation factor 2 subunit|Staphylothermus marinus (strain ATCC

Query: 5 AYLPW 9
AYLPW
Sbjct: 39 AYLPW 43


>sp|IF2A_HYPBU|TRANSLATION initiation factor 2 subunit|Hyperthermus butylicus (strain DSM

Query: 5 AYLPW 9
AYLPW
Sbjct: 39 AYLPW 43


>sp|GFO6_HALMA|D-XYLOSE 1-dehydrogenase [NADP(+)]|Haloarcula marismortui (strain ATCC 43049

Query: 4 PAYLPW 9
PA+ PW
Sbjct: 284 PAFYPW 289


>sp|GLNA_SULAC|GLUTAMINE synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ECPAYLPW 9
E P YL W
Sbjct: 330 EAPVYLVW 337


>sp|RN393_SACS2|CRISPR system ring nuclease SSO1393|Saccharolobus solfataricus (strain

Query: 4 PAYLPWL 10
P YL WL
Sbjct: 208 PKYLDWL 214


>sp|GCSPA_SULAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfolobus

Query: 3 CPAYLP 8
CP Y+P
Sbjct: 80 CPHYIP 85


>sp|GCSPA_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 CPAYLP 8
CP Y+P
Sbjct: 80 CPHYIP 85


>sp|GCSPA_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 CPAYLP 8
CP Y+P
Sbjct: 80 CPHYIP 85


>sp|GCSPA_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 CPAYLP 8
CP Y+P
Sbjct: 80 CPHYIP 85


>sp|GCSPA_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 CPAYLP 8
CP Y+P
Sbjct: 80 CPHYIP 85


>sp|GCSPA_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 CPAYLP 8
CP Y+P
Sbjct: 80 CPHYIP 85


>sp|GCSPA_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 CPAYLP 8
CP Y+P
Sbjct: 80 CPHYIP 85


>sp|GCSPA_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 CPAYLP 8
CP Y+P
Sbjct: 80 CPHYIP 85


>sp|PDAD_THESM|PYRUVOYL-DEPENDENT arginine decarboxylase|Thermococcus sibiricus (strain DSM 12597

Query: 4 PAYLPWL 10
PAY+ W+
Sbjct: 47 PAYIEWI 53


>sp|Y2210_ARCFU|UNCHARACTERIZED protein AF_2210|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CPAYLPWL 10
CP+Y P++
Sbjct: 48 CPSYCPFV 55


>sp|GLNA_THEKO|GLUTAMINE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 ECPAYLPW 9
E P Y+ W
Sbjct: 293 EAPVYISW 300


>sp|GLNA_PYRWO|GLUTAMINE synthetase|Pyrococcus woesei

Query: 2 ECPAYLPW 9
E P Y+ W
Sbjct: 289 EAPVYISW 296


>sp|GLNA_PYRHO|GLUTAMINE synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ECPAYLPW 9
E P Y+ W
Sbjct: 293 EAPVYISW 300


>sp|GLNA_HALVD|GLUTAMINE synthetase|Haloferax volcanii (strain ATCC 29605

Query: 2 ECPAYLPW 9
E P Y+ W
Sbjct: 315 EAPVYIAW 322


>sp|GLNA_HALSA|GLUTAMINE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ECPAYLPW 9
E P Y+ W
Sbjct: 314 EAPVYIAW 321


>sp|GLNA3_HALMT|GLUTAMINE synthetase 3|Haloferax mediterranei (strain ATCC 33500

Query: 2 ECPAYLPW 9
E P Y+ W
Sbjct: 315 EAPVYIAW 322


>sp|GLNA1_METMA|GLUTAMINE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ECPAYLPW 9
E P Y+ W
Sbjct: 307 EAPVYISW 314


>sp|IF2P_CALMQ|PROBABLE translation initiation factor IF-2|Caldivirga maquilingensis

Query: 5 AYLPW 9
+YLPW
Sbjct: 47 SYLPW 51


>sp|GLNA_SACS2|GLUTAMINE synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ECPAYLPW 9
E P Y+ W
Sbjct: 328 EAPVYIAW 335


>sp|GLNA_PYRAB|GLUTAMINE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 2 ECPAYLPW 9
E P Y+ W
Sbjct: 289 EAPVYISW 296


>sp|GLNA_PYRFU|GLUTAMINE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ECPAYLPW 9
E P Y+ W
Sbjct: 289 EAPVYISW 296


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CPAYLPWL 10
C A++ WL
Sbjct: 161 CAAFVAWL 168


>sp|SYFA_METTH|PHENYLALANINE--TRNA ligase alpha subunit|Methanothermobacter thermautotrophicus (strain

Query: 2 ECPAYLP 8
EC YLP
Sbjct: 435 ECEIYLP 441


>sp|CBIN_HALSA|COBALT transport protein CbiN|Halobacterium salinarum (strain ATCC

Query: 4 PAYLPWL 10
P+Y PW
Sbjct: 42 PSYEPWF 48


>sp|CBIN_HALS3|COBALT transport protein CbiN|Halobacterium salinarum (strain ATCC 29341

Query: 4 PAYLPWL 10
P+Y PW
Sbjct: 42 PSYEPWF 48


>sp|MOBA_METTH|PROBABLE molybdenum cofactor guanylyltransferase|Methanothermobacter

Query: 3 CPAYLPW 9
C A +PW
Sbjct: 125 CDAIVPW 131


>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 2 ECPAYLPWL 10
+CP + W+
Sbjct: 144 DCPTLIEWV 152


>sp|COMD_METJA|SULFOPYRUVATE decarboxylase subunit alpha|Methanocaldococcus jannaschii (strain

Query: 1 CECPAYLP 8
CE P Y P
Sbjct: 123 CEIPTYKP 130




30|Sequence|146|155|YLPWLEKRIK

>sp|ILVC_METMA|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina mazei (strain ATCC

Query: 2 LPWLEKRI 9
+PWL K+I
Sbjct: 325 IPWLNKKI 332


>sp|ILVC_METAC|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina acetivorans (strain ATCC

Query: 2 LPWLEKRI 9
+PWL K+I
Sbjct: 325 IPWLNKKI 332


>sp|Y047_ARCFU|UNCHARACTERIZED protein AF_0047|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LPWLEKRIK 10
+ WLEKR+K
Sbjct: 20 VAWLEKRVK 28


>sp|PYRD_HALSA|DIHYDROOROTATE dehydrogenase (quinone)|Halobacterium salinarum (strain ATCC 700922

Query: 3 PWLEKRI 9
PW+ KRI
Sbjct: 319 PWVAKRI 325


>sp|PYRD_HALS3|DIHYDROOROTATE dehydrogenase (quinone)|Halobacterium salinarum (strain ATCC 29341

Query: 3 PWLEKRI 9
PW+ KRI
Sbjct: 319 PWVAKRI 325


>sp|CSD_METTH|PROBABLE cysteine desulfurase|Methanothermobacter thermautotrophicus (strain

Query: 1 YLPWLEKR 8
+LPWL R
Sbjct: 118 FLPWLRLR 125


>sp|EF1A_IGNH4|ELONGATION factor 1-alpha|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 PWLEKRIK 10
PW EKR K
Sbjct: 162 PWSEKRYK 169


>sp|MTAD1_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 WLEKRI 9
WLEK+I
Sbjct: 76 WLEKKI 81


>sp|SYTC_SACS2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 YLPWLEK 7
YL WLEK
Sbjct: 128 YLSWLEK 134


>sp|SYTC_SACI7|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 YLPWLEK 7
YL WLEK
Sbjct: 128 YLSWLEK 134


>sp|SYTC_SACI1|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 YLPWLEK 7
YL WLEK
Sbjct: 128 YLSWLEK 134


>sp|SYTC_SACI2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 1 YLPWLEK 7
YL WLEK
Sbjct: 128 YLTWLEK 134


>sp|SYTC_SACI6|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 1 YLPWLEK 7
YL WLEK
Sbjct: 128 YLTWLEK 134


>sp|SYTC_SACI4|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 1 YLPWLEK 7
YL WLEK
Sbjct: 128 YLTWLEK 134


>sp|SYTC_SACI3|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.27)

Query: 1 YLPWLEK 7
YL WLEK
Sbjct: 128 YLTWLEK 134


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 LPWLEK 7
+PW+EK
Sbjct: 11 IPWVEK 16


>sp|PFDA1_THEKO|PREFOLDIN subunit alpha 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LPWLEKRIK 10
+ +LEKRIK
Sbjct: 96 IEYLEKRIK 104


>sp|SYTC_METS5|THREONINE--TRNA ligase catalytic subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 YLPWLEK 7
YL WLEK
Sbjct: 124 YLQWLEK 130


>sp|IDI2_THEKO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 WLEKRI 9
WLE+RI
Sbjct: 358 WLEQRI 363


>sp|IDI2_THEON|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus onnurineus (strain NA1)

Query: 4 WLEKRI 9
WLE+RI
Sbjct: 358 WLEQRI 363


>sp|IDI2_THESM|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus sibiricus (strain DSM 12597

Query: 4 WLEKRI 9
WLE+RI
Sbjct: 358 WLEQRI 363


>sp|IDI2_PYRFU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 WLEKRI 9
WLE+RI
Sbjct: 355 WLEQRI 360


>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 YLPWLEK 7
YL WLEK
Sbjct: 131 YLNWLEK 137


>sp|RFCL_PYRAE|REPLICATION factor C large subunit|Pyrobaculum aerophilum (strain ATCC

Query: 2 LPWLEK 7
LPW+EK
Sbjct: 3 LPWIEK 8


>sp|AMT2_ARCFU|AMMONIUM transporter Amt2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 WLEKR 8
WLEKR
Sbjct: 340 WLEKR 344


>sp|RTCA_PYRHO|RNA 3'-terminal phosphate cyclase|Pyrococcus horikoshii (strain ATCC

Query: 3 PWLEKR 8
PW EKR
Sbjct: 170 PWNEKR 175


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 YLPWLEKRI 9
YLP+LE +
Sbjct: 954 YLPYLEGNV 962


>sp|RFCL_PYRFU|REPLICATION factor C large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LPWLEK 7
LPW+EK
Sbjct: 4 LPWVEK 9


>sp|RFCL_PYRAR|REPLICATION factor C large subunit|Pyrobaculum arsenaticum (strain DSM

Query: 2 LPWLEK 7
LPW+EK
Sbjct: 3 LPWVEK 8


>sp|RS4_META3|SMALL ribosomal subunit protein uS4|Methanococcus aeolicus (strain ATCC

Query: 3 PWLEKRIK 10
PW+ +RIK
Sbjct: 17 PWIGERIK 24


>sp|IF2A_HYPBU|TRANSLATION initiation factor 2 subunit|Hyperthermus butylicus (strain DSM

Query: 1 YLPWLE 6
YLPW E
Sbjct: 40 YLPWSE 45


>sp|SYFA_THEVO|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PWLEKRIK 10
P +EKRIK
Sbjct: 288 PEIEKRIK 295


>sp|CCA_ARCFU|CCA-ADDING enzyme|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 WLEKRIK 10
WLE RIK
Sbjct: 136 WLEGRIK 142


>sp|AROD_SACS2|3-DEHYDROQUINATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YLPWLEK 7
YLP LEK
Sbjct: 118 YLPTLEK 124


>sp|IF2A_STAMF|TRANSLATION initiation factor 2 subunit|Staphylothermus marinus (strain ATCC

Query: 1 YLPWLE 6
YLPW E
Sbjct: 40 YLPWSE 45




31|Sequence|151|160|EKRIKGSGGW

>sp|HELS_CALMQ|ATP-DEPENDENT DNA helicase Hel308|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 EKRIKGSG 8
EKRI G G
Sbjct: 224 EKRISGQG 231


>sp|PYRG_METTH|CTP synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 EKRIKGSGG 9
+KRIK GG
Sbjct: 421 QKRIKNMGG 429


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 EKRIKGSG 8
EKR+KG G
Sbjct: 783 EKRLKGGG 790


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KRIKGSGG 9
K IKG GG
Sbjct: 286 KEIKGDGG 293


>sp|RFCL_STAMF|REPLICATION factor C large subunit|Staphylothermus marinus (strain ATCC 43588

Query: 3 RIKGSGGW 10
RI+ SG W
Sbjct: 298 RIRKSGSW 305


>sp|LYSK_PYRAE|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrobaculum aerophilum

Query: 4 IKGSGG 9
+KGSGG
Sbjct: 49 VKGSGG 54




32|Sequence|156|165|GSGGWTLTRR

>sp|TOP6A_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 1 GSGGWTL 7
GSGGW +
Sbjct: 178 GSGGWAV 184


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 2 SGGWTLTRR 10
+GGW+ T R
Sbjct: 790 TGGWSYTVR 798


>sp|CSM4_THEON|CRISPR system Cms protein Csm4|Thermococcus onnurineus (strain NA1)

Query: 3 GGWTLTRR 10
GGW+ RR
Sbjct: 233 GGWSFGRR 240


>sp|TOP6A_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 1 GSGGWTL 7
G+GGW +
Sbjct: 175 GTGGWAV 181


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 2 SGGWTLTR 9
SGG+ LTR
Sbjct: 509 SGGYLLTR 516


>sp|TOP6A_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GSGGWTL 7
G+GGW +
Sbjct: 175 GTGGWAV 181


>sp|HAH4_HALMT|HALOCIN-H4 mediterranei (strain ATCC 33500

Query: 1 GSGGW 5
GSGGW
Sbjct: 99 GSGGW 103


>sp|AMPPA_METLZ|AMP phosphorylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 GWTLTR 9
GW LTR
Sbjct: 475 GWRLTR 480




33|Sequence|161|170|TLTRRIEDLW

>sp|SYG_METTP|GLYCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LTRRIEDLW 10
L RRIED+W
Sbjct: 40 LKRRIEDIW 48


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LTRRIEDLW 10
L RRIED W
Sbjct: 813 LVRRIEDRW 821


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 LTRRIEDLW 10
+ RRIED W
Sbjct: 767 IVRRIEDRW 775


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LTRRIEDLW 10
+ RRIED W
Sbjct: 767 IVRRIEDRW 775


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LTRRIEDLW 10
+ RRIED W
Sbjct: 760 IVRRIEDRW 768


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LTRRIEDLW 10
+ RRIED W
Sbjct: 759 IARRIEDRW 767


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LTRRIEDLW 10
+ RRIED W
Sbjct: 798 IVRRIEDRW 806


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LTRRIEDLW 10
+ RRIED W
Sbjct: 809 IVRRIEDRW 817


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LTRRIEDLW 10
L RRIED W
Sbjct: 827 LVRRIEDRW 835


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LTRRIEDLW 10
L RRIED W
Sbjct: 826 LVRRIEDRW 834


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 2 LTRRIEDLW 10
L RRIED W
Sbjct: 826 LVRRIEDRW 834


>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 LTRRIEDLW 10
L RRIED W
Sbjct: 221 LVRRIEDRW 229


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LTRRIEDLW 10
+ RRIED W
Sbjct: 741 VVRRIEDRW 749


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LTRRIEDLW 10
+ RR+ED W
Sbjct: 833 IVRRVEDRW 841


>sp|SYC_IGNH4|CYSTEINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 TLTRRIEDL 9
TLTRR+ED
Sbjct: 7 TLTRRLEDF 15


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 RIEDLW 10
RIEDLW
Sbjct: 680 RIEDLW 685


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LTRRIEDLW 10
+ RRIED W
Sbjct: 829 IVRRIEDRW 837


>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LTRRIEDLW 10
L R+IE++W
Sbjct: 39 LRRKIENIW 47


>sp|PMDHL_AERPE|PHOSPHOMEVALONATE dehydratase large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 LTRRIEDL 9
L RR+EDL
Sbjct: 277 LARRMEDL 284


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LTRRIEDLW 10
+ RRIED W
Sbjct: 685 VVRRIEDRW 693


>sp|SPH2_HALSA|SMC-LIKE protein Sph2|Halobacterium salinarum (strain ATCC 700922

Query: 1 TLTRRIEDLW 10
++ RRIEDL
Sbjct: 154 SIQRRIEDLQ 163


>sp|SPH2_HALS3|SMC-LIKE protein Sph2|Halobacterium salinarum (strain ATCC 29341

Query: 1 TLTRRIEDLW 10
++ RRIEDL
Sbjct: 154 SIQRRIEDLQ 163


>sp|SYC_STAMF|CYSTEINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 TLTRRIEDL 9
TLTR+IE+
Sbjct: 9 TLTRKIEEF 17


>sp|TRUA_PYRAB|TRNA pseudouridine synthase A|Pyrococcus abyssi (strain GE5 /

Query: 2 LTRRIEDLW 10
L R+ED+W
Sbjct: 76 LNARLEDVW 84


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 LTRRIEDLW 10
+ RR+ED W
Sbjct: 849 VVRRVEDRW 857


>sp|TRUD_THEGJ|PROBABLE tRNA pseudouridine synthase D|Thermococcus gammatolerans (strain

Query: 2 LTRRIEDL 9
L+RRIE+L
Sbjct: 272 LSRRIEEL 279


>sp|NADM_METMJ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LTRRIEDL 9
LTR +EDL
Sbjct: 57 LTRSLEDL 64


>sp|DNLI_METKA|DNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 TRRIEDL 9
TRRIED+
Sbjct: 269 TRRIEDV 275


>sp|UPP_PYRIL|URACIL phosphoribosyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 TLTRRIEDLW 10
T+TR IE+++
Sbjct: 141 TMTRAIEEVY 150


>sp|SYG_METKA|GLYCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 LTRRIEDLW 10
L R+IE+ W
Sbjct: 42 LKRKIEEKW 50


>sp|YBP2_ACIAM|UNCHARACTERIZED protein in bps2 5'region|Acidianus ambivalens (Desulfurolobus

Query: 1 TLTRRIEDLW 10
T+ +RI+ +W
Sbjct: 136 TIVKRIKKVW 145


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 5 RIEDLW 10
+IEDLW
Sbjct: 681 KIEDLW 686


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 5 RIEDLW 10
+IEDLW
Sbjct: 681 KIEDLW 686


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 RIEDLW 10
+IEDLW
Sbjct: 618 KIEDLW 623




34|Sequence|166|175|IEDLWELHPS

>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 IEDLWEL 7
IEDLWEL
Sbjct: 334 IEDLWEL 340


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 IEDLWEL 7
IEDLWEL
Sbjct: 334 IEDLWEL 340


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 IEDLWEL 7
+EDLWEL
Sbjct: 258 VEDLWEL 264


>sp|PURA2_METAC|ADENYLOSUCCINATE synthetase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EDLWELHP 9
EDLWE P
Sbjct: 361 EDLWECSP 368


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 IEDLWEL 7
+EDLWEL
Sbjct: 258 VEDLWEL 264


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 1 IEDLWEL 7
IEDLW+L
Sbjct: 264 IEDLWDL 270


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 1 IEDLWEL 7
IEDLW+L
Sbjct: 265 IEDLWDL 271


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 1 IEDLWEL 7
IEDLW+L
Sbjct: 262 IEDLWDL 268


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 1 IEDLWEL 7
IEDLW+L
Sbjct: 262 IEDLWDL 268


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 1 IEDLWEL 7
IEDLW+L
Sbjct: 262 IEDLWDL 268


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 1 IEDLWEL 7
IEDLW+L
Sbjct: 268 IEDLWDL 274


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 IEDLWEL 7
IEDLW L
Sbjct: 265 IEDLWNL 271


>sp|PELO_METHJ|PROTEIN pelota homolog|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 EDLWELH 8
+DLW LH
Sbjct: 23 DDLWHLH 29


>sp|Y870_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 IEDLWELHP 9
I+DLW +P
Sbjct: 12 IKDLWYTYP 20


>sp|ARGC_METST|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 EDLWELHPS 10
EDL LHP+
Sbjct: 42 EDLSSLHPN 50


>sp|AMPPA_PYRHO|AMP phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 WELHPS 10
W+LHP+
Sbjct: 27 WKLHPN 32


>sp|AMPPA_PYRAB|AMP phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 5 WELHPS 10
W+LHP+
Sbjct: 27 WKLHPN 32


>sp|THSB_SULTO|CHAPERONIN subunit beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IEDLWEL 7
+ED+W+L
Sbjct: 494 VEDMWKL 500


>sp|QUEE_METKA|7-CARBOXY-7-DEAZAGUANINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 IEDLWEL 7
+EDLWEL
Sbjct: 223 LEDLWEL 229


>sp|HISX_THEKO|HISTIDINOL dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IEDLWELH 8
+E LWE H
Sbjct: 63 MERLWEYH 70


>sp|CFBD_METJA|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanocaldococcus

Query: 2 EDLWEL 7
EDLWE
Sbjct: 101 EDLWEF 106


>sp|PELO_METB6|PROTEIN pelota homolog|Methanoregula boonei (strain DSM 21154

Query: 1 IEDLWELH 8
I+DLW L
Sbjct: 22 IDDLWHLQ 29


>sp|PELO_IGNH4|PROTEIN pelota homolog|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 EDLWELHPS 10
ED+W LH +
Sbjct: 21 EDVWILHSA 29


>sp|Y674_METJA|UNCHARACTERIZED protein MJ0674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IEDLWELH 8
+ +LWE+H
Sbjct: 34 LNELWEIH 41


>sp|PELO_METST|PROTEIN pelota homolog|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IEDLWEL 7
I+DLW L
Sbjct: 20 IDDLWHL 26


>sp|PELO_METLZ|PROTEIN pelota homolog|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 IEDLWEL 7
I+DLW L
Sbjct: 24 IDDLWHL 30


>sp|PELO_SULAC|PROTEIN pelota homolog|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EDLWELH 8
+DLW LH
Sbjct: 21 DDLWLLH 27


>sp|CDPAS_THEPD|CDP-ARCHAEOL synthase|Thermofilum pendens (strain DSM 2475

Query: 5 WELHP 9
W LHP
Sbjct: 67 WRLHP 71


>sp|NADA2_METAC|QUINOLINATE synthase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IEDLWELHP 9
IE+L LHP
Sbjct: 188 IEELKNLHP 196


>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IEDLW 5
IEDLW
Sbjct: 456 IEDLW 460


>sp|MCAL_HALMA|L-MALYL-COA/BETA-METHYLMALYL-COA lyase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IEDLWELHP 9
I+ W LHP
Sbjct: 247 IDGSWSLHP 255


>sp|RL5_THEKO|LARGE ribosomal subunit protein uL5|Thermococcus kodakarensis (strain

Query: 5 WELHP 9
WE HP
Sbjct: 12 WEAHP 16


>sp|PYRH_PYRFU|URIDYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IEDLWE 6
+ED WE
Sbjct: 93 VEDFWE 98


>sp|PELO_THEKO|PROTEIN pelota homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IEDLWELH 8
++DLW L+
Sbjct: 20 LDDLWHLY 27


>sp|RL5_METJA|LARGE ribosomal subunit protein uL5|Methanocaldococcus jannaschii

Query: 2 EDLWELHP 9
E+LW+ +P
Sbjct: 4 EELWQKNP 11


>sp|RL5_PYRFU|LARGE ribosomal subunit protein uL5|Pyrococcus furiosus (strain ATCC

Query: 5 WELHP 9
WE HP
Sbjct: 15 WEAHP 19


>sp|PELO_PYRAB|PROTEIN pelota homolog|Pyrococcus abyssi (strain GE5 /

Query: 1 IEDLWELH 8
++DLW L+
Sbjct: 20 LDDLWHLY 27


>sp|PELO_THEON|PROTEIN pelota homolog|Thermococcus onnurineus (strain NA1)

Query: 1 IEDLWELH 8
++DLW L+
Sbjct: 20 LDDLWHLY 27


>sp|PELO_SACI3|PROTEIN pelota homolog|Saccharolobus islandicus (strain M.16.27)

Query: 2 EDLWELH 8
+DLW LH
Sbjct: 21 DDLWILH 27


>sp|PELO_PYRFU|PROTEIN pelota homolog|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IEDLWELH 8
++DLW L+
Sbjct: 20 LDDLWHLY 27


>sp|PELO_PYRHO|PROTEIN pelota homolog|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IEDLWELH 8
++DLW L+
Sbjct: 20 LDDLWHLY 27


>sp|PELO_SACI7|PROTEIN pelota homolog|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 EDLWELH 8
+DLW LH
Sbjct: 21 DDLWILH 27


>sp|PELO_SACI2|PROTEIN pelota homolog|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 EDLWELH 8
+DLW LH
Sbjct: 21 DDLWILH 27


>sp|PELO_SACI1|PROTEIN pelota homolog|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 EDLWELH 8
+DLW LH
Sbjct: 21 DDLWILH 27


>sp|PELO_SACI6|PROTEIN pelota homolog|Saccharolobus islandicus (strain M.16.4 /

Query: 2 EDLWELH 8
+DLW LH
Sbjct: 21 DDLWILH 27


>sp|PELO_SACI4|PROTEIN pelota homolog|Saccharolobus islandicus (strain M.14.25 /

Query: 2 EDLWELH 8
+DLW LH
Sbjct: 21 DDLWILH 27


>sp|RL5_PYRAB|LARGE ribosomal subunit protein uL5|Pyrococcus abyssi (strain GE5 /

Query: 5 WELHP 9
WE HP
Sbjct: 15 WEAHP 19


>sp|RL5_PYRHO|LARGE ribosomal subunit protein uL5|Pyrococcus horikoshii (strain ATCC

Query: 5 WELHP 9
WE HP
Sbjct: 15 WEAHP 19


>sp|GLNA_ARCFU|GLUTAMINE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IEDLWELHPS 10
+ED++EL P+
Sbjct: 417 LEDVYELTPA 426


>sp|PELO_THEGJ|PROTEIN pelota homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 1 IEDLWELH 8
++DLW L+
Sbjct: 20 LDDLWHLY 27


>sp|SYS_METAR|SERINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 EDLWELH 8
ED W++H
Sbjct: 294 EDSWKIH 300


>sp|PELO_METKA|PROTEIN pelota homolog|Methanopyrus kandleri (strain AV19 /

Query: 1 IEDLWELH 8
++DLW L+
Sbjct: 20 LDDLWHLY 27


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IEDLWEL 7
IEDLW L
Sbjct: 619 IEDLWIL 625


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IEDLWEL 7
IEDLW L
Sbjct: 681 IEDLWLL 687


>sp|PELO_HALWD|PROTEIN pelota homolog|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IEDLWEL 7
++DLW L
Sbjct: 23 VDDLWHL 29


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IEDLWEL 7
IEDLW L
Sbjct: 682 IEDLWIL 688


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 IEDLWEL 7
IEDLW L
Sbjct: 682 IEDLWIL 688




35|Sequence|171|180|ELHPSFDIVV

>sp|COFH_METMJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanoculleus marisnigri (strain ATCC

Query: 2 LHPSFDI 8
LHP FD+
Sbjct: 117 LHPEFDV 123


>sp|SURE_HYPBU|5'-NUCLEOTIDASE SurE|Hyperthermus butylicus (strain DSM 5456

Query: 1 ELHPSFDIVV 10
E P FD+VV
Sbjct: 85 EFSPRFDVVV 94


>sp|LEU3_ARCFU|3-ISOPROPYLMALATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LHPSFDIVV 10
L+P DIVV
Sbjct: 102 LYPGLDIVV 110


>sp|RNZ_PYRHO|RIBONUCLEASE Z|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PSFDIVV 10
PSFDI+V
Sbjct: 109 PSFDILV 115


>sp|MTNA_METTH|PUTATIVE methylthioribose-1-phosphate isomerase|Methanothermobacter

Query: 2 LHPSFDIV 9
++P+FDIV
Sbjct: 286 INPAFDIV 293


>sp|COFH_METHJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanospirillum hungatei JF-1 (strain

Query: 2 LHPSFDI 8
LHP++D+
Sbjct: 117 LHPAYDL 123


>sp|R1PKT_HALXS|ATP-DEPENDENT ribose-1-phosphate kinase|Halopiger xanaduensis (strain DSM 18323

Query: 2 LHPSFDI 8
+HP FD+
Sbjct: 226 VHPGFDV 232


>sp|PGK_METMP|PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ELHPSFDIVV 10
+LHP FD V
Sbjct: 146 KLHPFFDYFV 155


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 2 LHPSFD 7
LHP FD
Sbjct: 458 LHPDFD 463


>sp|RL4_THESM|LARGE ribosomal subunit protein uL4|Thermococcus sibiricus (strain DSM

Query: 3 HPSFDIVV 10
HP D+VV
Sbjct: 214 HPGVDVVV 221


>sp|RL4_PYRHO|LARGE ribosomal subunit protein uL4|Pyrococcus horikoshii (strain ATCC

Query: 3 HPSFDIVV 10
HP D+VV
Sbjct: 214 HPGVDVVV 221


>sp|RL4_PYRFU|LARGE ribosomal subunit protein uL4|Pyrococcus furiosus (strain ATCC

Query: 3 HPSFDIVV 10
HP D+VV
Sbjct: 214 HPGVDVVV 221


>sp|RL4_PYRAB|LARGE ribosomal subunit protein uL4|Pyrococcus abyssi (strain GE5 /

Query: 3 HPSFDIVV 10
HP D+VV
Sbjct: 214 HPGVDVVV 221


>sp|GLCDH_METPS|GLUCOSE 1-dehydrogenase|Methanocella paludicola (strain DSM 17711

Query: 1 ELHPSFDIVV 10
E H FDI+V
Sbjct: 237 EKHGPFDIIV 246


>sp|UREG_HALWD|UREASE accessory protein UreG|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ELHPSFDIVV 10
E HP D+V+
Sbjct: 95 ESHPELDVVL 104


>sp|Y179_ARCFU|UNCHARACTERIZED protein AF_0179|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELHPSFD 7
E+ PSFD
Sbjct: 24 EIEPSFD 30


>sp|ARGC_METMJ|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 HPSFDIV 9
HPS D+V
Sbjct: 23 HPSADVV 29


>sp|RIBL_METSF|FAD synthase|Methanocaldococcus sp. (strain FS406-22)

Query: 3 HPSFDIV 9
H SFDIV
Sbjct: 131 HSSFDIV 137


>sp|RIBL_METVM|FAD synthase|Methanocaldococcus vulcanius (strain ATCC 700851

Query: 2 LHPSFDIV 9
H SFDIV
Sbjct: 134 FHSSFDIV 141


>sp|RIBL_METJA|FAD synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LHPSFDIV 9
H SFDIV
Sbjct: 128 FHSSFDIV 135


>sp|RIBL_METFA|FAD synthase|Methanocaldococcus fervens (strain DSM 4213

Query: 3 HPSFDIV 9
H SFDIV
Sbjct: 130 HSSFDIV 136


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 1 ELHPSFDIVV 10
E HP D+V+
Sbjct: 203 ERHPETDVVL 212


>sp|UREG_CENSY|UREASE accessory protein UreG|Cenarchaeum symbiosum (strain A)

Query: 3 HPSFDIVV 10
HP D+V+
Sbjct: 98 HPELDLVI 105


>sp|RNZ_PYRFU|RIBONUCLEASE Z|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PSFDIVV 10
P FD+VV
Sbjct: 109 PGFDVVV 115


>sp|TRPA_METVO|TRYPTOPHAN synthase alpha chain|Methanococcus voltae

Query: 1 ELHPSFDIV 9
++H SFD++
Sbjct: 83 KIHQSFDVL 91


>sp|PUR5_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 ELHPSFDIV 9
E HP F+I+
Sbjct: 271 EPHPVFEII 279




36|Sequence|176|185|FDIVVNCSGL

>sp|AROE_THEAC|SHIKIMATE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FDIVVNCSGL 10
+DI VNC+ L
Sbjct: 175 YDIYVNCTPL 184


>sp|HIS7_HALSA|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Halobacterium salinarum (strain ATCC 700922

Query: 1 FDIVVNCSG 9
FD+ V C G
Sbjct: 51 FDVTVRCDG 59


>sp|HIS7_HALS3|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Halobacterium salinarum (strain ATCC 29341

Query: 1 FDIVVNCSG 9
FD+ V C G
Sbjct: 51 FDVTVRCDG 59


>sp|PUR5_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 FDIVVNCSG 9
FD+VV C G
Sbjct: 155 FDLVVACLG 163


>sp|G3P_ARCFU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DIVVNCS 8
DIVV+CS
Sbjct: 81 DIVVDCS 87


>sp|HEM1_METLZ|GLUTAMYL-TRNA reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 DIVVNCSG 9
D+V++C+G
Sbjct: 234 DVVISCTG 241


>sp|HIS7_NATPD|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FDIVVNCSG 9
FD+ V C G
Sbjct: 51 FDLTVRCDG 59


>sp|HIS7_HALWD|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 FDIVVNCSG 9
FD+ V C G
Sbjct: 64 FDLTVRCDG 72


>sp|AROE_HALMA|SHIKIMATE dehydrogenase (NADP(+))|Haloarcula marismortui (strain ATCC 43049

Query: 2 DIVVNCSGL 10
DI+VNC+ +
Sbjct: 178 DILVNCTSV 186


>sp|AROE_THEVO|SHIKIMATE dehydrogenase (NADP(+))|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FDIVVNCSGL 10
+DI +NC+ L
Sbjct: 176 YDIYINCTPL 185


>sp|HIS7_HALMA|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Haloarcula marismortui (strain ATCC 43049

Query: 1 FDIVVNCSG 9
FD+ V C G
Sbjct: 51 FDLTVQCDG 59


>sp|AROC_METS5|CHORISMATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 2 DIVVNCS 8
DIVV CS
Sbjct: 292 DIVVRCS 298


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 IVVNCSGL 10
+V+NCS L
Sbjct: 115 LVINCSNL 122


>sp|ARFB_METIM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanocaldococcus infernus (strain

Query: 3 IVVNCSG 9
I+VNC G
Sbjct: 103 IIVNCHG 109


>sp|KCY_SULAC|CYTIDYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FDIVVNCSGL 10
FD+V+N S L
Sbjct: 149 FDLVINTSYL 158


>sp|ARFB_METVM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanocaldococcus vulcanius (strain

Query: 3 IVVNCSG 9
I+VNC G
Sbjct: 103 IIVNCHG 109


>sp|AROE_META3|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus aeolicus (strain ATCC

Query: 1 FDIVVNCSGL 10
FDI++N + L
Sbjct: 187 FDIIINTTSL 196


>sp|KCY_SACS2|CYTIDYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FDIVVNCSGL 10
FD+V+N S +
Sbjct: 149 FDLVINTSNI 158


>sp|AGL14_HALVD|PROBABLE low-salt glycan biosynthesis reductase|Haloferax volcanii (strain

Query: 2 DIVVNCSG 9
D+V+NC+
Sbjct: 63 DLVINCAA 70


>sp|KCY_SACI6|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 FDIVVNCSGL 10
FD+V+N S +
Sbjct: 149 FDLVINTSNV 158


>sp|KCY_SACI4|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 FDIVVNCSGL 10
FD+V+N S +
Sbjct: 149 FDLVINTSNV 158


>sp|KCY_SACI3|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 FDIVVNCSGL 10
FD+V+N S +
Sbjct: 149 FDLVINTSNV 158


>sp|KCY_SACI2|CYTIDYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 FDIVVNCSGL 10
FD+V+N S +
Sbjct: 149 FDLVINTSNV 158


>sp|KCY_SACI7|CYTIDYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 FDIVVNCSGL 10
FD+V+N S +
Sbjct: 149 FDLVINTSNV 158


>sp|KCY_SACI1|CYTIDYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 FDIVVNCSGL 10
FD+V+N S +
Sbjct: 149 FDLVINTSNV 158


>sp|ARLY_HALSA|ARGININOSUCCINATE lyase|Halobacterium salinarum (strain ATCC 700922

Query: 3 IVVNCSGL 10
+ V CSGL
Sbjct: 243 VAVTCSGL 250


>sp|ARLY_HALS3|ARGININOSUCCINATE lyase|Halobacterium salinarum (strain ATCC 29341

Query: 3 IVVNCSGL 10
+ V CSGL
Sbjct: 243 VAVTCSGL 250


>sp|KCY_SULTO|CYTIDYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FDIVVNCSGL 10
FD+V+N L
Sbjct: 149 FDLVINTDNL 158


>sp|CBIA_SULTO|COBYRINATE a,c-diamide synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 IVVNCSGL 10
+VVNCS +
Sbjct: 115 LVVNCSNV 122




37|Sequence|181|190|NCSGLGSRQL

>sp|DNAJ_METTE|CHAPERONE protein DnaJ|Methanosarcina thermophila

Query: 1 NCSGLGSR 8
NCSG G+R
Sbjct: 145 NCSGTGAR 152


>sp|AROE_METAC|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina acetivorans (strain ATCC

Query: 1 NCSGLGSRQ 9
N GLG+RQ
Sbjct: 102 NTDGLGARQ 110


>sp|ARLY_METHJ|ARGININOSUCCINATE lyase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 NCSGLGSRQL 10
NCS LGS L
Sbjct: 193 NCSPLGSAAL 202


>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 3 SGLGSRQL 10
SGLGSR L
Sbjct: 538 SGLGSRLL 545


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 2 CSGLGSR 8
C+GLGS+
Sbjct: 289 CNGLGSK 295


>sp|ARTA_HALVD|ARCHAEOSORTASE A|Haloferax volcanii (strain ATCC 29605

Query: 2 CSGLGS 7
C+GLGS
Sbjct: 173 CTGLGS 178


>sp|CBIA_SACS2|COBYRINATE a,c-diamide synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NCSGLGS 7
NCS +GS
Sbjct: 116 NCSNIGS 122


>sp|PUS10_KORCO|TRNA pseudouridine synthase Pus10|Korarchaeum cryptofilum (strain

Query: 2 CSGLGSRQL 10
C GL SR+L
Sbjct: 29 CDGLLSREL 37




38|Sequence|186|195|GSRQLAGDSK

>sp|CDPAS_HALSA|CDP-ARCHAEOL synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GSRQLAGDSK 10
G R+L GD K
Sbjct: 40 GGRRLLGDGK 49


>sp|CDPAS_HALS3|CDP-ARCHAEOL synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GSRQLAGDSK 10
G R+L GD K
Sbjct: 40 GGRRLLGDGK 49


>sp|CDPAS_HALWD|CDP-ARCHAEOL synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GSRQLAGDSK 10
G R++ GD K
Sbjct: 41 GGRRILGDGK 50




39|Sequence|191|200|AGDSKIFPVR

>sp|MFNA_METAR|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanocella arvoryzae

Query: 2 GDSKIFP 8
GD K+FP
Sbjct: 53 GDPKLFP 59


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 2 GDSKIFPV 9
G KIFPV
Sbjct: 539 GRGKIFPV 546


>sp|PYRF_THEAC|OROTIDINE 5'-phosphate decarboxylase|Thermoplasma acidophilum (strain ATCC

Query: 1 AGDSKIFPV 9
+GD+K+F V
Sbjct: 102 SGDTKVFSV 110


>sp|CBID_METMP|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus maripaludis (strain DSM

Query: 2 GDSKIFPVR 10
GDS I P++
Sbjct: 47 GDSLIIPIK 55


>sp|CBID_METM5|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 GDSKIFPVR 10
GDS I P++
Sbjct: 47 GDSLIIPIK 55


>sp|CBID_METM6|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus maripaludis (strain C6 /

Query: 2 GDSKIFPVR 10
GDS I P++
Sbjct: 47 GDSLIIPIK 55


>sp|PRIS_PYRAR|DNA primase small subunit PriS|Pyrobaculum arsenaticum (strain DSM

Query: 1 AGDSKIFP 8
AGD KI P
Sbjct: 288 AGDLKILP 295


>sp|GLNB4_METBA|NITROGEN fixation nifHD2 region GlnB-like|Methanosarcina barkeri

Query: 1 AGDSKIF 7
AGD KIF
Sbjct: 94 AGDGKIF 100




40|Sequence|196|205|IFPVRGQVLQ

>sp|RS17_METAC|SMALL ribosomal subunit protein uS17A|Methanosarcina acetivorans

Query: 2 FPVRGQVL 9
PVRGQ+L
Sbjct: 27 LPVRGQIL 34


>sp|RS17_METLZ|SMALL ribosomal subunit protein uS17|Methanocorpusculum labreanum

Query: 2 FPVRGQVL 9
PVRGQV+
Sbjct: 27 LPVRGQVI 34


>sp|RS17_METMA|SMALL ribosomal subunit protein uS17|Methanosarcina mazei (strain ATCC

Query: 2 FPVRGQVL 9
PVRGQ+L
Sbjct: 27 LPVRGQIL 34


>sp|RS17_METTH|SMALL ribosomal subunit protein uS17|Methanothermobacter

Query: 2 FPVRGQVLQ 10
P+RGQ+L+
Sbjct: 24 LPLRGQILE 32


>sp|RS17_THEVO|SMALL ribosomal subunit protein uS17|Thermoplasma volcanium (strain

Query: 2 FPVRGQVL 9
PVRGQVL
Sbjct: 28 LPVRGQVL 35


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 FPVRGQV 8
FP+RG+V
Sbjct: 207 FPIRGKV 213


>sp|RS17_METMJ|SMALL ribosomal subunit protein uS17|Methanoculleus marisnigri (strain

Query: 2 FPVRGQVL 9
PVRGQV+
Sbjct: 27 LPVRGQVI 34


>sp|RS17_METHJ|SMALL ribosomal subunit protein uS17|Methanospirillum hungatei JF-1

Query: 2 FPVRGQVL 9
PVRGQV+
Sbjct: 27 LPVRGQVI 34


>sp|DTDA_PYRAR|D-AMINOACYL-TRNA deacylase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 PVRGQVLQ 10
P RG++LQ
Sbjct: 232 PARGEILQ 239


>sp|RS17_HALSA|SMALL ribosomal subunit protein uS17|Halobacterium salinarum (strain

Query: 4 VRGQVLQ 10
VRGQVL+
Sbjct: 27 VRGQVLE 33


>sp|RS17_HALS3|SMALL ribosomal subunit protein uS17|Halobacterium salinarum (strain

Query: 4 VRGQVLQ 10
VRGQVL+
Sbjct: 27 VRGQVLE 33


>sp|RS17_METB6|SMALL ribosomal subunit protein uS17|Methanoregula boonei (strain DSM

Query: 2 FPVRGQVL 9
PVRGQV+
Sbjct: 27 LPVRGQVI 34


>sp|RS17_METBU|SMALL ribosomal subunit protein uS17|Methanococcoides burtonii (strain

Query: 2 FPVRGQV 8
PVRGQ+
Sbjct: 27 LPVRGQI 33


>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 1 IFPVRGQVLQ 10
+FPV+G+ L
Sbjct: 355 VFPVQGRKLH 364




41|Sequence|201|210|GQVLQVQAPW

>sp|TMCA_AERPE|TRNA(MET) cytidine acetyltransferase TmcA|Aeropyrum pernix (strain ATCC

Query: 1 GQVLQVQAPW 10
G+V++V PW
Sbjct: 277 GEVIRVSGPW 286


>sp|SECF_METP4|PROTEIN-EXPORT membrane protein SecF|Methanolacinia petrolearia (strain DSM 11571

Query: 1 GQVLQVQAPW 10
G+ LQ QA W
Sbjct: 120 GKTLQSQAIW 129


>sp|G1PDH_KORCO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GQVLQVQAP 9
G+V++V+AP
Sbjct: 99 GRVIRVEAP 107




42|Sequence|206|215|VQAPWVEHFI

>sp|RFCS_METVS|REPLICATION factor C small subunit|Methanococcus vannielii (strain ATCC

Query: 1 VQAPWVEHF 9
+Q PWVE +
Sbjct: 1 MQKPWVEKY 9


>sp|RFCS_METMP|REPLICATION factor C small subunit|Methanococcus maripaludis (strain DSM

Query: 1 VQAPWVEHF 9
+Q PWVE +
Sbjct: 1 MQKPWVEKY 9


>sp|RFCS_METM7|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C7 /

Query: 1 VQAPWVEHF 9
+Q PWVE +
Sbjct: 1 MQKPWVEKY 9


>sp|RFCS_METM6|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C6 /

Query: 1 VQAPWVEHF 9
+Q PWVE +
Sbjct: 1 MQKPWVEKY 9


>sp|RFCS_METM5|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C5 /

Query: 1 VQAPWVEHF 9
+Q PWVE +
Sbjct: 1 MQKPWVEKY 9


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 2 QAPWVEHFI 10
+ PW+++FI
Sbjct: 1646 KEPWIKNFI 1654


>sp|KAE1B_METS3|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 VQAPWVEH 8
V+APWV +
Sbjct: 323 VEAPWVNN 330


>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 QAPWVEHF 9
A WV+HF
Sbjct: 109 HASWVDHF 116


>sp|Y2180_SACI7|MEMO1 family protein YG5714_2180|Saccharolobus islandicus (strain

Query: 1 VQAPWVEHF 9
VQ P+++HF
Sbjct: 142 VQLPFLQHF 150


>sp|TRM1_PYRIL|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum islandicum

Query: 1 VQAPW 5
+QAPW
Sbjct: 293 IQAPW 297


>sp|Y1566_ARCFU|UNCHARACTERIZED protein AF_1566|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 WVEHFI 10
WV+HF+
Sbjct: 67 WVQHFL 72


>sp|HELS_HALMA|ATP-DEPENDENT DNA helicase Hel308|Haloarcula marismortui (strain ATCC 43049

Query: 3 APWVE 7
APW+E
Sbjct: 133 APWIE 137


>sp|KAE1B_THEVO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 VQAPWV 6
V APWV
Sbjct: 320 VDAPWV 325


>sp|Y1715_METAC|UPF0280 protein MA_1715|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VQAPWVEHF 9
V+AP EHF
Sbjct: 13 VRAPIKEHF 21


>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 QAPWVEHF 9
Q WV+HF
Sbjct: 283 QTLWVDHF 290


>sp|Y706_METBF|UPF0288 protein Mbar_A0706|Methanosarcina barkeri (strain Fusaro /

Query: 5 WVEHF 9
W EHF
Sbjct: 83 WAEHF 87


>sp|GLMM_METMA|PROBABLE phosphoglucosamine mutase|Methanosarcina mazei (strain ATCC

Query: 1 VQAPWVEH 8
V AP +EH
Sbjct: 44 VSAPMIEH 51


>sp|GLMM_METBF|PROBABLE phosphoglucosamine mutase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VQAPWVEH 8
V AP +EH
Sbjct: 44 VSAPMIEH 51


>sp|GLMM_METAC|PROBABLE phosphoglucosamine mutase|Methanosarcina acetivorans (strain ATCC

Query: 1 VQAPWVEH 8
V AP +EH
Sbjct: 44 VSAPMIEH 51


>sp|DSRA_ARCFU|SULFITE reductase, dissimilatory-type subunit alpha|Archaeoglobus

Query: 2 QAPWVEHF 9
Q P VEHF
Sbjct: 88 QIPEVEHF 95


>sp|PDXT_HYPBU|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Hyperthermus butylicus (strain

Query: 1 VQAPWVEHF 9
+Q W+EH
Sbjct: 9 LQGDWIEHI 17


>sp|DOXA_ACIAM|THIOSULFATE dehydrogenase [quinone] small subunit|Acidianus ambivalens

Query: 1 VQAPWVEH 8
+QAPW E+
Sbjct: 103 IQAPWNEN 110




43|Sequence|211|220|VEHFIRDGSG

>sp|GSA2_CENSY|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase 2|Cenarchaeum symbiosum (strain A)

Query: 1 VEHFIRDGSG 10
+ HF++DG+G
Sbjct: 363 MTHFVQDGAG 372


>sp|RSMA_PYRIL|PROBABLE ribosomal RNA small subunit|Pyrobaculum islandicum (strain DSM

Query: 2 EHFIRDGS 9
+HF+RD S
Sbjct: 8 QHFLRDTS 15


>sp|SYE_NANEQ|GLUTAMATE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 HFIRDG 8
HFIR+G
Sbjct: 543 HFIREG 548


>sp|ATGT_META3|TRNA-GUANINE(15) transglycosylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VEHFIRDG 8
VE F RDG
Sbjct: 586 VEEFARDG 593


>sp|RSMA_PYRAE|PROBABLE ribosomal RNA small subunit|Pyrobaculum aerophilum (strain ATCC

Query: 2 EHFIRDGS 9
+HF+RD S
Sbjct: 8 QHFLRDPS 15


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 3 HFIRDGSG 10
HFIRD G
Sbjct: 1187 HFIRDLQG 1194


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 3 HFIRDGSG 10
HFIRD G
Sbjct: 1185 HFIRDLQG 1192


>sp|FLAI_SULAC|ARCHAEAL flagellar ATPase motor FlaI|Sulfolobus acidocaldarius (strain ATCC

Query: 1 VEHFIRD 7
+ HFIRD
Sbjct: 117 IYHFIRD 123


>sp|SYR_METAR|ARGININE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 4 FIRDGS 9
F+RDGS
Sbjct: 260 FVRDGS 265


>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HFIRDGSG 10
HF+RD G
Sbjct: 231 HFVRDELG 238


>sp|F16A2_HALMA|FRUCTOSE-1,6-BISPHOSPHATASE class 1 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 EHFIRDG 8
EH +RDG
Sbjct: 141 EHLLRDG 147


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VEHFIRDGSG 10
VEHF R G
Sbjct: 375 VEHFFRPRRG 384


>sp|T2M5_METJA|TYPE II restriction enzyme MjaV|Methanocaldococcus jannaschii (strain

Query: 1 VEHFIRD 7
+EH+++D
Sbjct: 90 IEHYVKD 96


>sp|ARGJ_METKA|GLUTAMATE N-acetyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 EHFIRDGSG 10
E +RDG G
Sbjct: 250 EKIVRDGEG 258


>sp|TRPB1_METMA|TRYPTOPHAN synthase beta chain 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VEHFIRDGSG 10
++H++RD +G
Sbjct: 51 LDHYLRDFAG 60


>sp|TRPB1_METAC|TRYPTOPHAN synthase beta chain 1|Methanosarcina acetivorans (strain ATCC

Query: 1 VEHFIRDGSG 10
++H++RD +G
Sbjct: 51 LDHYLRDFAG 60




44|Sequence|216|225|RDGSGLTYIY

>sp|HIS6_PYRAE|IMIDAZOLE glycerol phosphate synthase subunit|Pyrobaculum aerophilum (strain

Query: 1 RDGSGLTY 8
RDG+GL Y
Sbjct: 178 RDGTGLGY 185


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 RDGSGLTYI 9
RD SG+T I
Sbjct: 396 RDASGITAI 404


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 1 RDGSGLTYI 9
RD SG+T I
Sbjct: 396 RDASGITAI 404


>sp|COMDE_METAC|SULFOPYRUVATE decarboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DGSGLTY 8
+G+GLTY
Sbjct: 122 EGAGLTY 128


>sp|Y1865_METTH|UPF0288 protein MTH_1865|Methanothermobacter thermautotrophicus (strain

Query: 3 GSGLTYIY 10
GSG YIY
Sbjct: 282 GSGRVYIY 289


>sp|Y903_METJA|UNCHARACTERIZED protein MJ0903|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RDGSGLTYIY 10
RD SG+ Y Y
Sbjct: 243 RDDSGIYYDY 252


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 DGSGLTYI 9
DGS +T+I
Sbjct: 180 DGSSITFI 187


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 RDGSGLTY 8
R G G+TY
Sbjct: 181 RTGGGITY 188


>sp|TRPD_SULTO|ANTHRANILATE phosphoribosyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 GLTYIY 10
G+TY+Y
Sbjct: 229 GITYVY 234




45|Sequence|221|230|LTYIYPGTSH

>sp|RL30E_METKA|LARGE ribosomal subunit protein eL30|Methanopyrus kandleri (strain AV19

Query: 3 YIYPGTS 9
++YPGTS
Sbjct: 62 FVYPGTS 68


>sp|Y486_METJA|UNCHARACTERIZED protein MJ0486|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YIYPGTS 9
Y YPGT+
Sbjct: 101 YFYPGTN 107


>sp|RS4_METTP|SMALL ribosomal subunit protein uS4|Methanothrix thermoacetophila

Query: 5 YPGTSH 10
YPG SH
Sbjct: 3 YPGKSH 8


>sp|PURT_METJA|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocaldococcus

Query: 4 IYPGTSH 10
I+PG SH
Sbjct: 316 IHPGASH 322


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YIYPG 7
YIYPG
Sbjct: 751 YIYPG 755


>sp|Y238_METTH|UNCHARACTERIZED protein MTH_238|Methanothermobacter thermautotrophicus (strain

Query: 6 PGTSH 10
PGTSH
Sbjct: 49 PGTSH 53


>sp|PURT_METM7|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 4 IYPGTSH 10
++PG SH
Sbjct: 315 LFPGASH 321


>sp|PURT_METM5|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 4 IYPGTSH 10
++PG SH
Sbjct: 315 LFPGASH 321


>sp|RNZ_IGNH4|RIBONUCLEASE Z|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LTYIYP 6
LTY YP
Sbjct: 106 LTYFYP 111


>sp|ECFA_METMJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanoculleus marisnigri

Query: 1 LTYIYPGTSH 10
LT+IY G H
Sbjct: 9 LTHIYRGDVH 18


>sp|BRIX_SULTO|PROBABLE Brix domain-containing ribosomal biogenesis|Sulfurisphaera

Query: 1 LTYIYPGT 8
LTY++P +
Sbjct: 27 LTYVFPNS 34


>sp|Y436_PYRFU|KELCH domain-containing protein PF0436|Pyrococcus furiosus (strain ATCC

Query: 3 YIYPGTS 9
+++PGTS
Sbjct: 197 FVFPGTS 203


>sp|EF2_PYRNV|ELONGATION factor 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 TYIYPGTS 9
TYIY G S
Sbjct: 342 TYIYMGPS 349


>sp|EF2_PYRAE|ELONGATION factor 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 TYIYPGTS 9
TYIY G S
Sbjct: 342 TYIYMGPS 349


>sp|EF2_PYRIL|ELONGATION factor 2|Pyrobaculum islandicum (strain DSM 4184

Query: 2 TYIYPGTS 9
TYIY G S
Sbjct: 342 TYIYMGPS 349




46|Sequence|226|235|PGTSHVTLGG

>sp|PGK_THEON|PHOSPHOGLYCERATE kinase|Thermococcus onnurineus (strain NA1)

Query: 2 GTSHVTLGG 10
G SHV+ GG
Sbjct: 372 GISHVSTGG 380


>sp|PGK_THESM|PHOSPHOGLYCERATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 2 GTSHVTLGG 10
G SH++ GG
Sbjct: 372 GISHISTGG 380


>sp|PGK_THEKO|PHOSPHOGLYCERATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GTSHVTLGG 10
G SH++ GG
Sbjct: 372 GISHISTGG 380


>sp|PGK_PYRWO|PHOSPHOGLYCERATE kinase|Pyrococcus woesei

Query: 2 GTSHVTLGG 10
G SH++ GG
Sbjct: 372 GISHISTGG 380


>sp|PGK_PYRFU|PHOSPHOGLYCERATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GTSHVTLGG 10
G SH++ GG
Sbjct: 372 GISHISTGG 380


>sp|PELO_METLZ|PROTEIN pelota homolog|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PGTSHVTLGG 10
PGT V LGG
Sbjct: 324 PGTRLVGLGG 333


>sp|MPTA_METLZ|GTP cyclohydrolase MptA|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PGTSHVTL 8
PG +H+T+
Sbjct: 274 PGDTHITI 281


>sp|APE2_AERPE|HOMING endonuclease I-ApeII|Aeropyrum pernix (strain ATCC 700893

Query: 1 PGTSHVTL 8
PG H+TL
Sbjct: 66 PGQEHLTL 73


>sp|PELO_METKA|PROTEIN pelota homolog|Methanopyrus kandleri (strain AV19 /

Query: 2 GTSHVTLGG 10
G H+ +GG
Sbjct: 192 GVEHIVVGG 200


>sp|RL13_METHJ|LARGE ribosomal subunit protein uL13|Methanospirillum hungatei JF-1

Query: 4 SHVTLGG 10
SHVTLG
Sbjct: 125 SHVTLGA 131




47|Sequence|231|240|VTLGGTRQKG

>sp|MFNA_METB6|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoregula boonei (strain

Query: 2 TLGGTR 7
TLGGTR
Sbjct: 260 TLGGTR 265


>sp|MFNA_HALSA|PROBABLE L-aspartate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 2 TLGGTR 7
TLGGTR
Sbjct: 246 TLGGTR 251


>sp|MFNA_HALS3|PROBABLE L-aspartate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 2 TLGGTR 7
TLGGTR
Sbjct: 246 TLGGTR 251


>sp|Y2111_ARCFU|UPF0056 membrane protein AF_2111|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VTLGGTRQKG 10
+ LGGTR++
Sbjct: 93 ILLGGTRREA 102


>sp|RFCL_PYRHO|REPLICATION factor C large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VTLGGTRQKG 10
V + GT++KG
Sbjct: 310 VAVAGTKKKG 319


>sp|IDI2_NATPD|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VTLGGTRQ 8
V LGGTRQ
Sbjct: 344 VLLGGTRQ 351


>sp|DNAG_AERPE|DNA primase DnaG|Aeropyrum pernix (strain ATCC 700893

Query: 1 VTLGGTRQK 9
+ LGG R+K
Sbjct: 191 IALGGAREK 199




48|Sequence|236|245|TRQKGDWNLS

>sp|EF2_METTP|ELONGATION factor 2|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 KGDWN 8
KGDWN
Sbjct: 272 KGDWN 276


>sp|DHYS_METVS|PROBABLE deoxyhypusine synthase|Methanococcus vannielii (strain ATCC 35089

Query: 5 GDWNLS 10
GDWNL+
Sbjct: 120 GDWNLN 125


>sp|KADL_METTH|ADENYLATE kinase homolog MTH_1663|Methanothermobacter thermautotrophicus

Query: 2 RQKGDWNLS 10
R G+WNL+
Sbjct: 42 RVAGEWNLA 50


>sp|TRM56_METST|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosphaera stadtmanae

Query: 3 QKGDWNLS 10
+ DWNLS
Sbjct: 119 EAADWNLS 126


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 GDWNLS 10
GDWN+S
Sbjct: 457 GDWNIS 462


>sp|SYC_METBF|CYSTEINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 RQKGDWNLS 10
R+K DW +S
Sbjct: 436 RKKKDWTVS 444


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 5 GDWNLS 10
GDWN+S
Sbjct: 457 GDWNIS 462


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 GDWNLS 10
GDWN+S
Sbjct: 462 GDWNIS 467


>sp|COBQ_ARCFU|PROBABLE cobyric acid synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RQKGDW 7
RQK DW
Sbjct: 440 RQKEDW 445


>sp|Y1059_METJA|UNCHARACTERIZED glycosyltransferase MJ1059|Methanocaldococcus jannaschii (strain

Query: 1 TRQKGDWNL 9
T QKG W L
Sbjct: 212 TEQKGQWFL 220


>sp|TRM56_AERPE|TRNA (cytidine(56)-2'-O)-methyltransferase|Aeropyrum pernix (strain ATCC

Query: 3 QKGDWNLS 10
++ DWN+S
Sbjct: 127 EEADWNVS 134


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 6 DWNLS 10
DWNLS
Sbjct: 446 DWNLS 450


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 6 DWNLS 10
DWNLS
Sbjct: 446 DWNLS 450


>sp|SYFA_METKA|PHENYLALANINE--TRNA ligase alpha subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 QKGDW 7
+KGDW
Sbjct: 454 EKGDW 458


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QKGDWNL 9
+KG WNL
Sbjct: 642 KKGYWNL 648


>sp|CSG_HALVD|CELL surface glycoprotein|Haloferax volcanii (strain ATCC 29605

Query: 2 RQKGDWNL 9
R GDW L
Sbjct: 418 RDDGDWQL 425




49|Sequence|241|250|DWNLSPDAEN

>sp|GLMM_THEON|PROBABLE phosphoglucosamine mutase|Thermococcus onnurineus (strain NA1)

Query: 2 WNLSPDA 8
WNL+PD
Sbjct: 326 WNLTPDG 332


>sp|GLMM_THEKO|PROBABLE phosphoglucosamine mutase|Thermococcus kodakarensis (strain ATCC

Query: 2 WNLSPDA 8
WNL+PD
Sbjct: 326 WNLTPDG 332


>sp|GLMM_THEGJ|PROBABLE phosphoglucosamine mutase|Thermococcus gammatolerans (strain DSM

Query: 2 WNLSPDA 8
WNL+PD
Sbjct: 326 WNLTPDG 332


>sp|GLMM_PYRFU|PROBABLE phosphoglucosamine mutase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WNLSPDA 8
WNL+PD
Sbjct: 326 WNLTPDG 332


>sp|GLMM_PYRAB|PROBABLE phosphoglucosamine mutase|Pyrococcus abyssi (strain GE5 /

Query: 2 WNLSPDA 8
WNL+PD
Sbjct: 326 WNLTPDG 332


>sp|GLMM_PYRHO|PROBABLE phosphoglucosamine mutase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 WNLSPDA 8
WNL+PD
Sbjct: 326 WNLTPDG 332


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 WNLSPDAEN 10
W L+PD E+
Sbjct: 31 WTLNPDQEH 39


>sp|Y076_METFV|UNCHARACTERIZED protein Mfer_0076|Methanothermus fervidus (strain ATCC 43054

Query: 2 WNLSPDAEN 10
WNL DA+N
Sbjct: 180 WNLLTDAKN 188


>sp|Y1211_METTH|PUTATIVE transport protein MTH_1211|Methanothermobacter thermautotrophicus

Query: 3 NLSPDAEN 10
NL P AEN
Sbjct: 105 NLQPSAEN 112


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 WNLSPDAE 9
W L PD E
Sbjct: 30 WTLRPDQE 37


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 WNLSPDAE 9
W L PD E
Sbjct: 28 WTLDPDRE 35


>sp|Y488_METKA|PROTEIN MK0488|Methanopyrus kandleri (strain AV19 /

Query: 1 DWNLSPDAE 9
DW SPD E
Sbjct: 172 DWWCSPDCE 180


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WNLSPDAE 9
W L PD E
Sbjct: 28 WTLDPDRE 35


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 WNLSPDAE 9
W L PD E
Sbjct: 28 WTLDPDRE 35


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 WNLSPDAE 9
W L PD E
Sbjct: 28 WTLDPDRE 35


>sp|AATE_METJA|A-TYPE ATP synthase subunit E|Methanocaldococcus jannaschii (strain ATCC

Query: 2 WNLSPDAEN 10
WNL + EN
Sbjct: 140 WNLEKEVEN 148


>sp|THIC_PYRAE|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 WNLSPDAEN 10
W L DAEN
Sbjct: 195 WMLHNDAEN 203


>sp|RS15_ARCFU|SMALL ribosomal subunit protein uS15|Archaeoglobus fulgidus (strain ATCC

Query: 1 DWNLSPD 7
DW +PD
Sbjct: 138 DWKYNPD 144


>sp|GGGPS_METHJ|GERANYLGERANYLGLYCERYL phosphate synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DWNLSPD 7
DW ++PD
Sbjct: 101 DWAMNPD 107


>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 1 DWNLSPDAE 9
DW+ PD E
Sbjct: 642 DWSTDPDGE 650


>sp|IF2P_HALSA|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 2 WNLSPDA 8
WN +PDA
Sbjct: 146 WNPNPDA 152


>sp|IF2P_HALS3|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 2 WNLSPDA 8
WN +PDA
Sbjct: 146 WNPNPDA 152




50|Sequence|246|255|PDAENSREIL

>sp|DMRX_METJA|DIHYDROMETHANOPTERIN reductase (acceptor)|Methanocaldococcus jannaschii (strain ATCC

Query: 2 DAENSREIL 10
DAEN+R+++
Sbjct: 217 DAENTRKLM 225


>sp|LYSY_PYRAB|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 DAENSREIL 10
D+ENSR I+
Sbjct: 283 DSENSRAIV 291


>sp|DP2S_THEAC|DNA polymerase II small subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 PDAENSREIL 10
PD EN EIL
Sbjct: 285 PDQENDLEIL 294


>sp|GGGPS_METMP|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PDAENSREI 9
PD +N REI
Sbjct: 29 PDEKNYREI 37


>sp|GGGPS_METM7|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 1 PDAENSREI 9
PD +N REI
Sbjct: 29 PDEKNYREI 37


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PDAENSREIL 10
PD E +EIL
Sbjct: 350 PDKEGRKEIL 359


>sp|GGGPS_METM5|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C5 /

Query: 1 PDAENSREI 9
PD +N REI
Sbjct: 29 PDEKNYREI 37


>sp|OGG1_THEAC|8-OXOGUANINE DNA glycosylase/AP lyase|Thermoplasma acidophilum (strain ATCC

Query: 1 PDAENSREIL 10
PD E SR+ L
Sbjct: 110 PDHEGSRDYL 119


>sp|NASA_HALMT|ASSIMILATORY nitrate reductase|Haloferax mediterranei (strain ATCC 33500

Query: 1 PDAENSREIL 10
PDA +RE+L
Sbjct: 409 PDATAAREVL 418


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 PDAENSREIL 10
PD E +EIL
Sbjct: 347 PDREGRKEIL 356


>sp|FEN_AERPE|FLAP endonuclease 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 PDAENSREIL 10
PD + REIL
Sbjct: 303 PDQDKVREIL 312


>sp|TRPA_METTH|TRYPTOPHAN synthase alpha chain|Methanothermobacter thermautotrophicus

Query: 1 PDAENSREIL 10
PD E S EI+
Sbjct: 30 PDMETSLEII 39


>sp|RPO12_THEON|DNA-DIRECTED RNA polymerase subunit Rpo12|Thermococcus onnurineus (strain NA1)

Query: 2 DAENSREI 9
D EN+RE+
Sbjct: 18 DLENTREV 25


>sp|T1M1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 2 DAENSREIL 10
+AEN++E+L
Sbjct: 43 EAENTKELL 51


>sp|TRPB_HALVD|TRYPTOPHAN synthase beta chain|Haloferax volcanii (strain ATCC 29605

Query: 1 PDAENSREI 9
PDAEN+ ++
Sbjct: 373 PDAENADDL 381


>sp|RL31_THEVO|LARGE ribosomal subunit protein eL31|Thermoplasma volcanium (strain

Query: 1 PDAENSREIL 10
PD E S+EI+
Sbjct: 2 PDDEVSKEII 11


>sp|TOP6A_HALMA|TYPE 2 DNA topoisomerase 6|Haloarcula marismortui (strain ATCC 43049

Query: 1 PDAENSREIL 10
PD E +RE L
Sbjct: 9 PDTEEAREQL 18




51|Sequence|251|260|SREILSRCCA

>sp|SYR_METPE|ARGININE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 REILSRC 8
RE++SRC
Sbjct: 224 RELVSRC 230


>sp|Y1520_METJA|UNCHARACTERIZED protein MJ1520|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SREILSRC 8
+REILS C
Sbjct: 163 NREILSSC 170


>sp|HFLX_THEPD|GTPASE HflX|Thermofilum pendens (strain DSM 2475

Query: 2 REILSRC 8
RE+L RC
Sbjct: 380 RELLDRC 386


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 REILSRCC 9
+EIL CC
Sbjct: 462 KEILYTCC 469


>sp|DNAK_METAR|CHAPERONE protein DnaK|Methanocella arvoryzae (strain DSM 22066

Query: 2 REILSRCCA 10
RE++ RC A
Sbjct: 281 REVVERCYA 289




52|Sequence|256|265|SRCCALEPSL

>sp|Y417_METJA|UNCHARACTERIZED protein MJ0417|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SRCCALEPSL 10
SRC ++EP+L
Sbjct: 126 SRCRSIEPNL 135


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 CCALEPSL 10
CC + PSL
Sbjct: 434 CCTVNPSL 441


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 SRCCALEPSL 10
S C EPSL
Sbjct: 339 STCACFEPSL 348


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 1 SRCCALEPSL 10
S C EPSL
Sbjct: 339 STCACFEPSL 348


>sp|KDXD_HALVD|PROBABLE 2-keto-3-deoxyxylonate dehydratase|Haloferax volcanii (strain ATCC

Query: 2 RCCALEP 8
RCC++ P
Sbjct: 186 RCCSIGP 192


>sp|SYR_HALWD|ARGININE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SRCCALE 7
+RCC +E
Sbjct: 476 ARCCGIE 482




53|Sequence|261|270|LEPSLHGACN

>sp|G1PDH_METBU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcoides burtonii (strain DSM 6242

Query: 2 EPSLHG 7
EP+LHG
Sbjct: 270 EPALHG 275


>sp|ABLA_METMP|L-LYSINE 2,3-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LEPSLHGACN 10
+EPS +G C+
Sbjct: 377 VEPSDYGGCS 386


>sp|ENO_SACS2|ENOLASE solfataricus (strain ATCC 35092

Query: 1 LEPSLHG 7
++P+LHG
Sbjct: 73 IDPALHG 79


>sp|ENO_SACI7|ENOLASE islandicus (strain Y.G.57.14 /

Query: 1 LEPSLHG 7
++P+LHG
Sbjct: 73 IDPALHG 79


>sp|ENO_SACI6|ENOLASE islandicus (strain M.16.4 /

Query: 1 LEPSLHG 7
++P+LHG
Sbjct: 73 IDPALHG 79


>sp|ENO_SACI4|ENOLASE islandicus (strain M.14.25 /

Query: 1 LEPSLHG 7
++P+LHG
Sbjct: 73 IDPALHG 79


>sp|ENO_SACI3|ENOLASE islandicus (strain M.16.27) (Sulfolobus

Query: 1 LEPSLHG 7
++P+LHG
Sbjct: 73 IDPALHG 79


>sp|ENO_SACI2|ENOLASE islandicus (strain L.S.2.15 /

Query: 1 LEPSLHG 7
++P+LHG
Sbjct: 73 IDPALHG 79


>sp|ENO_SACI1|ENOLASE islandicus (strain Y.N.15.51 /

Query: 1 LEPSLHG 7
++P+LHG
Sbjct: 73 IDPALHG 79




54|Sequence|266|275|HGACNIREKV

>sp|AMPD_METSM|ANHYDROMEVALONATE phosphate decarboxylase|Methanobrevibacter smithii

Query: 2 GACNIREKV 10
G CN REK+
Sbjct: 48 GICNTREKI 56


>sp|AMPD_METTH|ANHYDROMEVALONATE phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 2 GACNIREKV 10
G CN REK+
Sbjct: 52 GLCNTREKI 60


>sp|GLMM_METMP|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain DSM 14266

Query: 4 CNIREKV 10
CN+REK+
Sbjct: 359 CNMREKI 365


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 2 GACNIR 7
GACNI+
Sbjct: 279 GACNIQ 284


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 2 GACNIR 7
GACNI+
Sbjct: 279 GACNIQ 284


>sp|RL14_CENSY|LARGE ribosomal subunit protein uL14|Cenarchaeum symbiosum (strain A)

Query: 1 HGACNIREK 9
HGA IR+K
Sbjct: 81 HGAVIIRQK 89




55|Sequence|271|280|IREKVGLRPY

>sp|HUTH_THEAC|PROBABLE histidine ammonia-lyase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 EKVGLRPY 10
EK GL+PY
Sbjct: 175 EKAGLKPY 182


>sp|COAD_PYRAB|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 REKVGLRP 9
RE+VGLRP
Sbjct: 113 REEVGLRP 120


>sp|HUTH_THEVO|PROBABLE histidine ammonia-lyase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 KVGLRPY 10
KVGL+PY
Sbjct: 176 KVGLKPY 182


>sp|DADD_METMP|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IREKVGLRPY 10
+ EK G+RP+
Sbjct: 216 VVEKTGMRPF 225


>sp|DADD_METM7|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C7 /

Query: 1 IREKVGLRPY 10
+ EK G+RP+
Sbjct: 216 VVEKTGMRPF 225


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 IREKVGLRPY 10
+ EK GL PY
Sbjct: 80 VMEKAGLNPY 89


>sp|DADD_METM6|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C6 /

Query: 1 IREKVGLRPY 10
+ EK G+RP+
Sbjct: 216 VVEKTGIRPF 225


>sp|EF2_THEVO|ELONGATION factor 2|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IREKVGLRP 9
IRE+ GLRP
Sbjct: 713 IRERKGLRP 721


>sp|CSM5_METJA|CRISPR system Cms protein Csm5|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IREKVGLRPY 10
I E VGL PY
Sbjct: 117 ILESVGLNPY 126


>sp|Y528_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 1 IREKVGLRPY 10
+RE+VG PY
Sbjct: 97 VREEVGFGPY 106


>sp|GUAAB_PYRFU|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus furiosus

Query: 3 EKVGLRPY 10
EK GLRP+
Sbjct: 226 EKAGLRPW 233


>sp|RIFK_ARCFU|RIBOFLAVIN kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IREKVGLRPY 10
REK+G PY
Sbjct: 131 FREKLGFDPY 140


>sp|EF2_PICTO|ELONGATION factor 2|Picrophilus torridus (strain ATCC 700027

Query: 1 IREKVGLRP 9
IRE+ GL+P
Sbjct: 713 IRERKGLKP 721


>sp|COAD_PYRFU|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 REKVGLRP 9
RE++GLRP
Sbjct: 114 REELGLRP 121


>sp|COAD_PYRHO|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 REKVGLRP 9
RE+VGL+P
Sbjct: 113 REEVGLKP 120


>sp|RIFK_IGNH4|RIBOFLAVIN kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 IREKVGLRPY 10
+REK+G P+
Sbjct: 78 VREKLGFDPF 87


>sp|RIFK_METBU|RIBOFLAVIN kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 IREKVGLRPY 10
EK+G +PY
Sbjct: 116 FEEKLGFKPY 125


>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IREKVGLRP 9
I KVGLRP
Sbjct: 210 IASKVGLRP 218


>sp|MTAD2_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IREKVGLRP 9
+RE+ G RP
Sbjct: 216 VRERYGKRP 224


>sp|RTCA_STAMF|RNA 3'-terminal phosphate cyclase|Staphylothermus marinus (strain ATCC

Query: 1 IREKVGLRP 9
IREK+G+ P
Sbjct: 216 IREKLGVEP 224


>sp|FLPA_PICTO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Picrophilus torridus (strain ATCC

Query: 1 IREKVGLRPY 10
I+E + LRPY
Sbjct: 192 IKEIIDLRPY 201


>sp|TMCA_THEKO|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus kodakarensis (strain

Query: 3 EKVGLRPY 10
EK+G +PY
Sbjct: 337 EKLGFKPY 344


>sp|DNLI_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 IREKVGLR 8
+RE+VGLR
Sbjct: 374 MREEVGLR 381


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 1 IREKVGLRP 9
IRE+ GL+P
Sbjct: 1235 IRERKGLKP 1243


>sp|MTAD_PYRAB|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus abyssi (strain GE5 /

Query: 3 EKVGLRPY 10
E+VGLR Y
Sbjct: 134 EEVGLRAY 141


>sp|FLPA_METTH|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanothermobacter

Query: 1 IREKVGLRPY 10
I ++VGL PY
Sbjct: 202 IIDQVGLNPY 211


>sp|SDX_SULTO|SULREDOXIN tokodaii (strain DSM 16993

Query: 2 REKVGLRPY 10
+EK+GL+ Y
Sbjct: 88 KEKLGLKTY 96


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 1 IREKVGLRP 9
IRE+ GL+P
Sbjct: 717 IRERKGLKP 725


>sp|GUAAB_THEKO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermococcus

Query: 3 EKVGLRPY 10
EK GL+P+
Sbjct: 220 EKAGLKPW 227


>sp|SDX_SACS2|PROBABLE sulredoxin|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 REKVGLRPY 10
+EK+GL+ Y
Sbjct: 88 KEKLGLKTY 96


>sp|FLPA_THEAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermoplasma acidophilum (strain

Query: 1 IREKVGLRPY 10
IRE + L PY
Sbjct: 205 IREVIDLSPY 214


>sp|MTAD_THESM|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus sibiricus (strain DSM 12597

Query: 3 EKVGLRPY 10
E++GLR Y
Sbjct: 131 EEIGLRAY 138


>sp|GLPK_THEKO|GLYCEROL kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IREKVGLRP 9
I+EK GL P
Sbjct: 121 IKEKTGLVP 129


>sp|RIFK_HALSA|RIBOFLAVIN kinase|Halobacterium salinarum (strain ATCC 700922

Query: 3 EKVGLRPY 10
EK+G PY
Sbjct: 128 EKLGYEPY 135


>sp|GLPK_PYRFU|GLYCEROL kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IREKVGLRP 9
I+EK GL P
Sbjct: 121 IKEKTGLVP 129


>sp|SYFB_METS5|PHENYLALANINE--TRNA ligase beta subunit|Metallosphaera sedula (strain ATCC 51363

Query: 3 EKVGLRPY 10
EKV RPY
Sbjct: 87 EKVASRPY 94


>sp|COAD_METJA|PHOSPHOPANTETHEINE adenylyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IREKVGLRP 9
IRE GL+P
Sbjct: 104 IRESKGLKP 112


>sp|MOAA_SULAC|PROBABLE GTP 3',8-cyclase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 EKVGLRP 9
+KVGLRP
Sbjct: 143 KKVGLRP 149


>sp|RIFK_PYRFU|RIBOFLAVIN kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IREKVGLRPY 10
IRE +G PY
Sbjct: 112 IREYLGFDPY 121


>sp|RIFK_PYRAB|RIBOFLAVIN kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 IREKVGLRPY 10
IRE +G PY
Sbjct: 112 IREYLGFDPY 121


>sp|GLPK_THEON|GLYCEROL kinase|Thermococcus onnurineus (strain NA1)

Query: 1 IREKVGLRP 9
I+EK GL P
Sbjct: 121 IKEKTGLVP 129


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 3 EKVGLRP 9
EK+G+RP
Sbjct: 479 EKIGVRP 485


>sp|RIFK_PYRHO|RIBOFLAVIN kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IREKVGLRPY 10
IRE +G PY
Sbjct: 112 IREYLGFDPY 121


>sp|RIFK_THEVO|RIBOFLAVIN kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 REKVGLRPY 10
+EK+G+ PY
Sbjct: 120 QEKLGIIPY 128


>sp|GLPK_PYRAB|GLYCEROL kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 IREKVGLRP 9
I+EK GL P
Sbjct: 121 IKEKTGLIP 129


>sp|DPCKG_PYRFU|GTP-DEPENDENT dephospho-CoA kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 KVGLRP 9
KVGLRP
Sbjct: 56 KVGLRP 61


>sp|RIFK_THEAC|RIBOFLAVIN kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 REKVGLRPY 10
+EK+G+ PY
Sbjct: 120 QEKLGIIPY 128


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 VGLRPY 10
+GLRPY
Sbjct: 792 LGLRPY 797


>sp|RIFK_PYRIL|RIBOFLAVIN kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 IREKVGLRPY 10
I +K+G PY
Sbjct: 108 IEQKLGFTPY 117


>sp|ATGT_PYRFU|TRNA-GUANINE(15) transglycosylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IREKVGLRP 9
I K+GLRP
Sbjct: 214 IASKMGLRP 222


>sp|RS13_THEPD|SMALL ribosomal subunit protein uS13|Thermofilum pendens (strain DSM

Query: 1 IREKVGLRPY 10
+ +K+GL PY
Sbjct: 40 VAKKLGLDPY 49


>sp|OTC_METKA|ORNITHINE carbamoyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 IREKVGLRPY 10
IREK+G P+
Sbjct: 148 IREKLGRGPH 157




56|Sequence|276|285|GLRPYRPGVR

>sp|DNLI1_HALWD|DNA ligase 1|Haloquadratum walsbyi (strain DSM 16790

Query: 3 RPYRPGVR 10
RPY+PG R
Sbjct: 465 RPYQPGSR 472


>sp|KAE1_THEKO|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus kodakarensis

Query: 1 GLRPYRPGVR 10
GLR YR GVR
Sbjct: 294 GLRMYRGGVR 303


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 GLRPYRPGV 9
G RP RPG+
Sbjct: 931 GARPLRPGI 939


>sp|APGM_METKA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanopyrus kandleri (strain AV19 /

Query: 2 LRPYRPGVR 10
L P RPGVR
Sbjct: 52 LDPIRPGVR 60


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PYRPGV 9
PY+PG+
Sbjct: 937 PYKPGI 942


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 GLRPYRPGVR 10
+RPY P VR
Sbjct: 767 AVRPYNPNVR 776


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PYRPGV 9
PY+PG+
Sbjct: 934 PYKPGI 939


>sp|HIS8_METJA|HISTIDINOL-PHOSPHATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LRPYRPG 8
L+PY PG
Sbjct: 17 LKPYVPG 23


>sp|DHE4_SACSH|NADP-SPECIFIC glutamate dehydrogenase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 GLRPYRPGVR 10
L PY+ GVR
Sbjct: 71 ALGPYKGGVR 80


>sp|DNLI_METMJ|DNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 PYRPGVR 10
PY PGVR
Sbjct: 399 PYTPGVR 405


>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 LRPYRPG 8
+RPY+P
Sbjct: 198 IRPYKPA 204


>sp|DNLI_METS3|DNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 PYRPGVR 10
PY PG+R
Sbjct: 408 PYIPGLR 414


>sp|DHE2_SACS2|GLUTAMATE dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GLRPYRPGVR 10
L PY+ GVR
Sbjct: 68 ALGPYKGGVR 77


>sp|HUTI_HALSA|IMIDAZOLONEPROPIONASE salinarum (strain ATCC 700922

Query: 4 PYRPGV 9
PY PGV
Sbjct: 393 PYNPGV 398


>sp|HUTI_HALS3|IMIDAZOLONEPROPIONASE salinarum (strain ATCC 29341

Query: 4 PYRPGV 9
PY PGV
Sbjct: 393 PYNPGV 398


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RPYRP 7
RPYRP
Sbjct: 508 RPYRP 512


>sp|MFNB_ARCFU|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GLRPYRPG 8
G PY+PG
Sbjct: 61 GDMPYKPG 68


>sp|RS6E_HALMA|SMALL ribosomal subunit protein eS6|Haloarcula marismortui (strain ATCC

Query: 3 RPYRPGVR 10
RP RP VR
Sbjct: 61 RPMRPDVR 68


>sp|DNLI_NANEQ|DNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 PYRPGVR 10
PY+PG R
Sbjct: 409 PYQPGRR 415


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GLRPYRPGVR 10
GLRPY +R
Sbjct: 793 GLRPYVQDIR 802


>sp|GAD_SACS2|D-GLUCONATE/D-GALACTONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 PYRPGV 9
PY+PG+
Sbjct: 352 PYKPGL 357


>sp|KAE1_THESM|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus sibiricus

Query: 1 GLRPYRPGVR 10
GLR ++ G+R
Sbjct: 294 GLRMFKAGIR 303


>sp|DNAG_METPE|DNA primase DnaG|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 LRPYRPG 8
LRP +PG
Sbjct: 287 LRPQKPG 293


>sp|KAE1_PYRFU|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus furiosus

Query: 1 GLRPYRPGVR 10
GLR Y+ G++
Sbjct: 294 GLRMYKAGIK 303


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 GLRPYRPGVR 10
LRPY P ++
Sbjct: 809 ALRPYAPDIK 818


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LRPYRPGVR 10
LRP +PG +
Sbjct: 654 LRPVKPGTK 662


>sp|RL10_AERPE|LARGE ribosomal subunit protein uL10|Aeropyrum pernix (strain ATCC 700893

Query: 1 GLRPYRPGVR 10
G+RP GVR
Sbjct: 187 GIRPIEKGVR 196


>sp|RL13_SULAC|LARGE ribosomal subunit protein uL13|Sulfolobus acidocaldarius (strain

Query: 4 PYRPGVR 10
PYR G+R
Sbjct: 67 PYRQGIR 73


>sp|DNLI1_KORCO|DNA ligase 1|Korarchaeum cryptofilum (strain OPF8)

Query: 4 PYRPGVR 10
PY PGVR
Sbjct: 392 PYIPGVR 398


>sp|DHE3_AERPE|GLUTAMATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GLRPYRPGVR 10
L PY+ GVR
Sbjct: 64 ALGPYKGGVR 73


>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 PYRPGVR 10
PY PG+R
Sbjct: 411 PYIPGIR 417


>sp|DNLI_METTF|DNA ligase|Methanothermobacter thermautotrophicus (Methanobacterium

Query: 4 PYRPGVR 10
PY PG+R
Sbjct: 411 PYIPGIR 417


>sp|AGMT_PYRHO|AGMATINASE horikoshii (strain ATCC 700860

Query: 1 GLRPYRPGVR 10
G Y+PG R
Sbjct: 32 GTTSYKPGAR 41


>sp|RL13_SACS2|LARGE ribosomal subunit protein uL13|Saccharolobus solfataricus (strain

Query: 4 PYRPGVR 10
PYR G+R
Sbjct: 69 PYRNGIR 75


>sp|KAE1_THEGJ|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus

Query: 1 GLRPYRPGVR 10
GLR Y GVR
Sbjct: 294 GLRMYLGGVR 303


>sp|Y528_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 1 GLRPYRPGVR 10
G PY GVR
Sbjct: 102 GFGPYNLGVR 111


>sp|LYSY_CENSY|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 LRPYRPG 8
+RPY+P
Sbjct: 198 IRPYKPA 204


>sp|RS4_METMJ|SMALL ribosomal subunit protein uS4|Methanoculleus marisnigri (strain

Query: 2 LRPYRPGVR 10
LR YR G R
Sbjct: 48 LRKYRAGAR 56




57|Sequence|281|290|RPGVRLQTEL

>sp|SYE_METHJ|GLUTAMATE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 GVRLQTEL 10
GVRL+T+L
Sbjct: 240 GVRLKTDL 247


>sp|Y405_METJA|UNCHARACTERIZED protein MJ0405|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RPGVRLQ 7
+PGVRL+
Sbjct: 39 KPGVRLE 45




58|Sequence|286|295|LQTELLARDG

>sp|PTR2_METJA|HTH-TYPE transcriptional regulator Ptr2|Methanocaldococcus jannaschii

Query: 1 LQTELLARDG 10
+ TE+ A+DG
Sbjct: 101 IMTEIWAKDG 110




59|Sequence|291|300|LARDGQRLPV

>sp|SYR_THESM|ARGININE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 ARDGQRLP 9
A+DG+R+P
Sbjct: 378 AKDGERMP 385


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 ARDGQRLPV 10
AR+GQ +P+
Sbjct: 680 ARNGQEMPI 688


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 ARDGQRLPV 10
AR+GQ +P+
Sbjct: 680 ARNGQEMPI 688


>sp|FLUC2_NATPD|FLUORIDE-SPECIFIC ion channel FluC 2|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LARDGQRLP 9
LA DGQRL
Sbjct: 82 LAEDGQRLA 90


>sp|COFH_HALSA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Halobacterium salinarum (strain ATCC

Query: 2 ARDGQRLPV 10
ARDG+RL V
Sbjct: 26 ARDGRRLTV 34


>sp|METK_HALWD|S-ADENOSYLMETHIONINE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 DGQRLPV 10
+GQRLPV
Sbjct: 99 NGQRLPV 105


>sp|RAD50_SULTO|DNA double-strand break repair Rad50|Sulfurisphaera tokodaii (strain

Query: 5 GQRLPV 10
GQRLPV
Sbjct: 779 GQRLPV 784


>sp|Y996_METJA|METALLOPROTEASE MJ0996|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ARDGQRLPV 10
+DGQ +PV
Sbjct: 429 GKDGQSVPV 437


>sp|Y1211_METTH|PUTATIVE transport protein MTH_1211|Methanothermobacter thermautotrophicus

Query: 1 LARDGQRL 8
ARDG+RL
Sbjct: 156 FARDGKRL 163


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 ARDGQRLPV 10
AR+G+ +P+
Sbjct: 680 ARNGEEMPI 688


>sp|RL30_PYRNV|LARGE ribosomal subunit protein uL30|Pyrobaculum neutrophilum (strain DSM

Query: 2 ARDGQRLP 9
AR+GQR P
Sbjct: 122 AREGQRAP 129


>sp|SRP19_HALSA|SIGNAL recognition particle 19 kDa|Halobacterium salinarum (strain ATCC

Query: 3 RDGQRLPV 10
RDG+R+P+
Sbjct: 18 RDGRRVPM 25


>sp|SRP19_HALS3|SIGNAL recognition particle 19 kDa|Halobacterium salinarum (strain ATCC

Query: 3 RDGQRLPV 10
RDG+R+P+
Sbjct: 18 RDGRRVPM 25


>sp|RNZ_HALVD|RIBONUCLEASE Z|Haloferax volcanii (strain ATCC 29605

Query: 1 LARDGQRLPV 10
+A DGQ+L V
Sbjct: 294 VAEDGQKLEV 303


>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 3 RDGQRL 8
RDGQRL
Sbjct: 241 RDGQRL 246


>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 2 ARDGQRLPV 10
A DG R+PV
Sbjct: 20 AADGTRVPV 28


>sp|SFSA_PYRFU|SUGAR fermentation stimulation protein homolog|Pyrococcus furiosus

Query: 1 LARDGQR 7
LARDG+R
Sbjct: 162 LARDGKR 168


>sp|RL30_PYRAR|LARGE ribosomal subunit protein uL30|Pyrobaculum arsenaticum (strain DSM

Query: 2 ARDGQRLP 9
AR+GQR P
Sbjct: 123 AREGQRPP 130


>sp|RL30_PYRCJ|LARGE ribosomal subunit protein uL30|Pyrobaculum calidifontis (strain DSM

Query: 2 ARDGQRLP 9
AR+GQR P
Sbjct: 126 AREGQRPP 133


>sp|RL10E_METBU|LARGE ribosomal subunit protein uL16|Methanococcoides burtonii (strain

Query: 1 LARDGQRLP 9
L R GQ+LP
Sbjct: 149 LRRAGQKLP 157




60|Sequence|296|305|QRLPVVHHYG

>sp|SYR_METLZ|ARGININE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 QRLPVVHHYG 10
++LP+VHH G
Sbjct: 268 EKLPIVHHEG 277


>sp|PURP_PYRCJ|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum calidifontis (strain DSM

Query: 3 LPVVHHYG 10
LPVVH YG
Sbjct: 239 LPVVHKYG 246


>sp|PURP_PYRAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum arsenaticum (strain DSM

Query: 3 LPVVHHYG 10
LP++H YG
Sbjct: 241 LPIIHKYG 248


>sp|THIM_CALMQ|HYDROXYETHYLTHIAZOLE kinase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 RLPVVHHY 9
R P+VHH+
Sbjct: 17 RKPLVHHF 24


>sp|KAD_HALMA|ADENYLATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 4 PVVHHYG 10
PV+ HYG
Sbjct: 180 PVIDHYG 186


>sp|SYE_META3|GLUTAMATE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 RLPVVHHYG 10
RLP+ + YG
Sbjct: 174 RLPIYYEYG 182


>sp|PCNA_HALWD|DNA polymerase sliding clamp|Haloquadratum walsbyi (strain DSM 16790

Query: 1 QRLPVVHHYG 10
Q PV HYG
Sbjct: 219 QEFPVKVHYG 228


>sp|PELO_METBF|PROTEIN pelota homolog|Methanosarcina barkeri (strain Fusaro /

Query: 6 VHHYG 10
VHHYG
Sbjct: 149 VHHYG 153


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 RLPVVHHYG 10
+LP +HYG
Sbjct: 315 KLPYYYHYG 323


>sp|SYE_METB6|GLUTAMATE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 RLPVVHHYG 10
++PV HYG
Sbjct: 320 KVPVYRHYG 328


>sp|PDXS_METMA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanosarcina mazei (strain

Query: 1 QRLPVVH 7
QRLPVV+
Sbjct: 210 QRLPVVN 216


>sp|PDXS_METAC|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanosarcina acetivorans

Query: 1 QRLPVVH 7
QRLPVV+
Sbjct: 210 QRLPVVN 216


>sp|THIM_ARCFU|HYDROXYETHYLTHIAZOLE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PVVHH 8
PVVHH
Sbjct: 22 PVVHH 26


>sp|THIM_METHJ|HYDROXYETHYLTHIAZOLE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 QRLPVVHH 8
++ P+VHH
Sbjct: 24 EKTPLVHH 31


>sp|CAS4_SACS2|CRISPR-ASSOCIATED exonuclease Cas4|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LPVVHH 8
LP++HH
Sbjct: 123 LPLIHH 128


>sp|PURP_SULTO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfurisphaera tokodaii (strain DSM

Query: 3 LPVVHHYG 10
LP+V+ YG
Sbjct: 240 LPLVYEYG 247


>sp|SYE_METLZ|GLUTAMATE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 RLPVVHHYG 10
++P +HYG
Sbjct: 320 KMPYFYHYG 328


>sp|Y120_METTH|PUTATIVE NADH dehydrogenase/NAD(P)H nitroreductase|Methanothermobacter

Query: 1 QRLPVVHHYG 10
+++P VH YG
Sbjct: 79 EKIPEVHPYG 88


>sp|TMG10_PYRAB|TRNA (guanine(10)-N2)-dimethyltransferase|Pyrococcus abyssi (strain

Query: 1 QRLPVVHHYG 10
+RL + H YG
Sbjct: 48 ERLGLAHEYG 57


>sp|NRPR_METMP|GLOBAL nitrogen regulator NrpR|Methanococcus maripaludis (strain DSM 14266

Query: 2 RLPVVHHYG 10
++PV+ +YG
Sbjct: 401 KIPVIPYYG 409


>sp|THIM_METAR|HYDROXYETHYLTHIAZOLE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 QRLPVVHH 8
++ P+VHH
Sbjct: 15 EKRPLVHH 22


>sp|HDRB1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit B1|Methanococcus

Query: 2 RLPVVHH 8
+LPV+H+
Sbjct: 259 KLPVIHY 265


>sp|NUCS_SULAC|ENDONUCLEASE NucS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QRLPVVHH 8
+RL ++HH
Sbjct: 98 ERLSILHH 105


>sp|AMPD_METTH|ANHYDROMEVALONATE phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 3 LPVVHHY 9
LP++ HY
Sbjct: 104 LPILRHY 110


>sp|TRPF_PYRIL|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 LPVVHHYG 10
+PVV H+G
Sbjct: 74 IPVVQHHG 81




61|Sequence|301|310|VHHYGHGSGG

>sp|GCK_PICTO|GLYCERATE 2-kinase|Picrophilus torridus (strain ATCC 700027

Query: 5 GHGSGG 10
GHGSGG
Sbjct: 321 GHGSGG 326


>sp|TRM5B_PYRAB|TRNA (guanine(37)-N(1))-methyltransferase Trm5b|Pyrococcus abyssi

Query: 1 VHHYGHGSGG 10
+H+YG G G
Sbjct: 274 IHYYGFGPEG 283


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VHHYGH 6
VH YGH
Sbjct: 392 VHRYGH 397


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VHHYGH 6
VH YGH
Sbjct: 385 VHRYGH 390


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 HHYGHGSGG 10
++YGHG G
Sbjct: 402 NNYGHGGNG 410


>sp|NADM_METPE|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanosphaerula palustris (strain ATCC

Query: 2 HHYGHGS 8
+HYGH S
Sbjct: 13 YHYGHQS 19


>sp|DNAJ_THEAC|CHAPERONE protein DnaJ|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 HHYGHGSG 9
H GHGSG
Sbjct: 321 HLNGHGSG 328


>sp|CAS1_THEKO|CRISPR-ASSOCIATED endonuclease Cas1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HHYGHGSG 9
+HYGH G
Sbjct: 67 NHYGHYDG 74


>sp|ALR_METMP|ALANINE racemase|Methanococcus maripaludis (strain DSM 14266

Query: 4 YGHGS 8
YGHGS
Sbjct: 41 YGHGS 45


>sp|Y947_ARCFU|PUTATIVE RNase AF_0947|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HHYGH 6
HHY H
Sbjct: 96 HHYNH 100


>sp|DNAJ_THEVO|CHAPERONE protein DnaJ|Thermoplasma volcanium (strain ATCC 51530

Query: 2 HHYGHGSG 9
H GHGSG
Sbjct: 321 HLNGHGSG 328


>sp|NADK_METHJ|NAD kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VHHYGH 6
+HH+GH
Sbjct: 25 LHHHGH 30


>sp|PYRK_PYRFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus furiosus

Query: 4 YGHGSGG 10
YGHG G
Sbjct: 81 YGHGFSG 87


>sp|METK_METTM|S-ADENOSYLMETHIONINE synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 5 GHGSG 9
GHGSG
Sbjct: 135 GHGSG 139


>sp|METK_METTH|S-ADENOSYLMETHIONINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 GHGSG 9
GHGSG
Sbjct: 135 GHGSG 139


>sp|METK_METS3|S-ADENOSYLMETHIONINE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 5 GHGSG 9
GHGSG
Sbjct: 135 GHGSG 139


>sp|PUS10_PICTO|TRNA pseudouridine synthase Pus10|Picrophilus torridus (strain ATCC

Query: 2 HHYGHGSG 9
++Y HGSG
Sbjct: 196 NYYLHGSG 203


>sp|Y048_ARCFU|UNCHARACTERIZED protein AF_0048|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VHHYGHG 7
V H GHG
Sbjct: 248 VFHVGHG 254


>sp|PUS10_THEAC|TRNA pseudouridine synthase Pus10|Thermoplasma acidophilum (strain ATCC

Query: 2 HHYGHGSG 9
++Y HGSG
Sbjct: 203 NYYLHGSG 210


>sp|HDRE_METAC|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina acetivorans

Query: 3 HYGHG 7
H+GHG
Sbjct: 79 HHGHG 83




62|Sequence|306|315|HGSGGISVHW

>sp|TIAS_METJA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocaldococcus jannaschii

Query: 2 GSGGISVH 9
G+GG+++H
Sbjct: 55 GNGGVAIH 62


>sp|PFDA_METLZ|PREFOLDIN subunit alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 GGISVH 9
GGISVH
Sbjct: 70 GGISVH 75


>sp|COFE_HALLT|COENZYME F420:L-glutamate ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 HGSGGISVHW 10
HG G+++ W
Sbjct: 157 HGQRGVAIGW 166


>sp|CYAS_METBF|CYSTEATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GSGGISV 8
G+GGISV
Sbjct: 235 GTGGISV 241


>sp|CBIT_METMP|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 GSGGISV 8
GSGG+SV
Sbjct: 42 GSGGMSV 48


>sp|CBIT_METM7|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 GSGGISV 8
GSGG+SV
Sbjct: 42 GSGGMSV 48


>sp|CBIT_METM6|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 GSGGISV 8
GSGG+SV
Sbjct: 42 GSGGMSV 48


>sp|CBIT_METM5|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 GSGGISV 8
GSGG+SV
Sbjct: 42 GSGGMSV 48


>sp|GATE_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Natronomonas pharaonis (strain ATCC

Query: 1 HGSGGI 6
HG+GGI
Sbjct: 333 HGAGGI 338


>sp|GATE_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 1 HGSGGI 6
HG+GGI
Sbjct: 338 HGAGGI 343


>sp|GATE_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 1 HGSGGI 6
HG+GGI
Sbjct: 338 HGAGGI 343


>sp|GATE_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Haloarcula marismortui (strain ATCC

Query: 1 HGSGGI 6
HG+GGI
Sbjct: 338 HGAGGI 343


>sp|R1PKT_HALXS|ATP-DEPENDENT ribose-1-phosphate kinase|Halopiger xanaduensis (strain DSM 18323

Query: 1 HGSGGISVH 9
HGS G VH
Sbjct: 211 HGSDGAEVH 219


>sp|TIAS_THEVO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermoplasma volcanium

Query: 2 GSGGISVH 9
G+G +SVH
Sbjct: 50 GNGALSVH 57


>sp|HCGF_METVS|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus vannielii

Query: 1 HGSGGISVH 9
HG GI +H
Sbjct: 12 HGKIGIKIH 20


>sp|HCGF_METM6|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 1 HGSGGISVH 9
HG GI +H
Sbjct: 12 HGKIGIKIH 20


>sp|HCGF_METM5|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 1 HGSGGISVH 9
HG GI +H
Sbjct: 12 HGKIGIKIH 20


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 2 GSGGISV 8
GSGG+S+
Sbjct: 459 GSGGLSI 465


>sp|NTPPA_THEKO|DTTP/UTP pyrophosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HGSGGISVHW 10
G GG+ V W
Sbjct: 150 QGKGGLFVEW 159


>sp|Y1598_METJA|UPF0284 protein MJ1598|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GSGGISVH 9
G+GGI+V+
Sbjct: 318 GAGGIAVY 325


>sp|PUR1_PYRHO|AMIDOPHOSPHORIBOSYLTRANSFERASE horikoshii (strain ATCC 700860

Query: 5 GISVHW 10
GISV+W
Sbjct: 255 GISVYW 260


>sp|THI4_HALMA|THIAMINE thiazole synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 HGSGGISVHW 10
H GGI ++W
Sbjct: 148 HRVGGIVMNW 157


>sp|NTPPA_THEON|DTTP/UTP pyrophosphatase|Thermococcus onnurineus (strain NA1)

Query: 1 HGSGGISVHW 10
G GG+ V W
Sbjct: 148 QGKGGLFVEW 157


>sp|HEM3_AERPE|PROBABLE porphobilinogen deaminase|Aeropyrum pernix (strain ATCC 700893

Query: 4 GGISVHW 10
G+S+HW
Sbjct: 28 AGVSMHW 34


>sp|ACAR_SULTO|ACRYLOYL-COENZYME A reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GSGGISVH 9
SGG+ +H
Sbjct: 172 ASGGVGIH 179


>sp|TRM14_PYRFU|TRNA (guanine(6)-N2)-methyltransferase|Pyrococcus furiosus (strain ATCC

Query: 2 GSGGISVH 9
G GG+ VH
Sbjct: 353 GHGGLMVH 360


>sp|HCGF_METM7|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 1 HGSGGISVH 9
HG G+ +H
Sbjct: 12 HGKIGVKIH 20


>sp|FLAB4_PYRAB|FLAGELLIN B4|Pyrococcus abyssi (strain GE5 /

Query: 2 GSGGISV 8
GSGGIS+
Sbjct: 86 GSGGISL 92


>sp|THI4_NATPD|THIAMINE thiazole synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 HGSGGISVHW 10
H GGI ++W
Sbjct: 145 HRVGGIVMNW 154




63|Sequence|311|320|ISVHWGTALE

>sp|GATB_METMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina mazei (strain ATCC

Query: 1 ISVHWGTALE 10
+SVHWGT +E
Sbjct: 205 VSVHWGTRVE 214


>sp|GATB_METBF|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 1 ISVHWGTALE 10
+SVHWGT +E
Sbjct: 205 VSVHWGTRVE 214


>sp|GATB_METAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 1 ISVHWGTALE 10
+SVHWGT +E
Sbjct: 205 VSVHWGTRVE 214


>sp|MTNA_ARCFU|PUTATIVE methylthioribose-1-phosphate isomerase|Archaeoglobus fulgidus

Query: 2 SVHWGTAL 9
+V WGTAL
Sbjct: 159 TVDWGTAL 166


>sp|MTNA_METAC|PUTATIVE methylthioribose-1-phosphate isomerase|Methanosarcina acetivorans

Query: 3 VHWGTAL 9
V WGTAL
Sbjct: 172 VDWGTAL 178


>sp|PHR_METTM|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 ISVHWGTALE 10
+ HW ALE
Sbjct: 30 VRAHWNHALE 39


>sp|TRPB_THEON|TRYPTOPHAN synthase beta chain|Thermococcus onnurineus (strain NA1)

Query: 4 HWGTAL 9
WGTAL
Sbjct: 137 QWGTAL 142


>sp|TRPB_PYRHO|TRYPTOPHAN synthase beta chain|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 HWGTAL 9
WGTAL
Sbjct: 148 QWGTAL 153


>sp|TRPB2_PYRFU|TRYPTOPHAN synthase beta chain 2|Pyrococcus furiosus (strain ATCC 43587

Query: 4 HWGTAL 9
WGTAL
Sbjct: 137 QWGTAL 142


>sp|TRPB2_METTH|TRYPTOPHAN synthase beta chain 2|Methanothermobacter thermautotrophicus

Query: 4 HWGTAL 9
WGTAL
Sbjct: 137 QWGTAL 142


>sp|SYFA_METAR|PHENYLALANINE--TRNA ligase alpha subunit|Methanocella arvoryzae (strain DSM 22066

Query: 3 VHWGTALE 10
V WG ALE
Sbjct: 454 VAWGLALE 461


>sp|PHR_METTH|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 ISVHWGTALE 10
+ HW ALE
Sbjct: 30 VRSHWNHALE 39


>sp|PRIS_NATPD|DNA primase small subunit PriS|Natronomonas pharaonis (strain ATCC

Query: 2 SVHWGTALE 10
S+H GT LE
Sbjct: 312 SLHGGTGLE 320


>sp|SYS_PYRCJ|SERINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 HWGT 7
HWGT
Sbjct: 126 HWGT 129




64|Sequence|316|325|GTALEAARLV

>sp|RL10E_METPE|LARGE ribosomal subunit protein uL16|Methanosphaerula palustris (strain

Query: 2 TALEAARL 9
TALEAAR+
Sbjct: 60 TALEAARI 67


>sp|RL10E_METMJ|LARGE ribosomal subunit protein uL16|Methanoculleus marisnigri (strain

Query: 2 TALEAARL 9
TALEAAR+
Sbjct: 60 TALEAARI 67


>sp|RL10E_METBF|LARGE ribosomal subunit protein uL16|Methanosarcina barkeri (strain

Query: 2 TALEAARL 9
TALEAAR+
Sbjct: 61 TALEAARI 68


>sp|RL10E_THEVO|LARGE ribosomal subunit protein uL16|Thermoplasma volcanium (strain

Query: 2 TALEAARL 9
TALEAAR+
Sbjct: 60 TALEAARV 67


>sp|RL10E_THEAC|LARGE ribosomal subunit protein uL16|Thermoplasma acidophilum (strain

Query: 2 TALEAARL 9
TALEAAR+
Sbjct: 60 TALEAARV 67


>sp|RL10E_METS5|LARGE ribosomal subunit protein uL16|Metallosphaera sedula (strain ATCC

Query: 3 ALEAARLV 10
ALEAAR++
Sbjct: 61 ALEAARVI 68


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GTALEAARL 9
GT LEA R+
Sbjct: 579 GTVLEAERI 587


>sp|RL10E_METAC|LARGE ribosomal subunit protein uL16|Methanosarcina acetivorans (strain

Query: 2 TALEAARL 9
TALEAAR+
Sbjct: 61 TALEAARI 68


>sp|GLCDH_HALMA|GLUCOSE 1-dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GTALEAARLV 10
GT LEA ++V
Sbjct: 74 GTGLEAGQVV 83


>sp|RL10E_ARCFU|LARGE ribosomal subunit protein uL16|Archaeoglobus fulgidus (strain

Query: 2 TALEAARLV 10
ALEAAR+V
Sbjct: 59 NALEAARVV 67


>sp|RL10E_METLZ|LARGE ribosomal subunit protein uL16|Methanocorpusculum labreanum

Query: 2 TALEAARL 9
TA+EAAR+
Sbjct: 60 TAMEAARI 67


>sp|RL10E_METMA|LARGE ribosomal subunit protein uL16|Methanosarcina mazei (strain ATCC

Query: 2 TALEAARL 9
TALEAAR+
Sbjct: 61 TALEAARI 68


>sp|RL10E_PICTO|LARGE ribosomal subunit protein uL16|Picrophilus torridus (strain ATCC

Query: 2 TALEAARL 9
TALEAAR+
Sbjct: 60 TALEAARV 67




65|Sequence|321|330|AARLVSECVH

>sp|METXA_HALVD|HOMOSERINE O-acetyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 AARLVSECV 9
AARL S+C+
Sbjct: 181 AARLDSQCL 189


>sp|METXA_HALPT|HOMOSERINE O-acetyltransferase|Haloferax prahovense (strain DSM 18310

Query: 1 AARLVSECV 9
AARL S+C+
Sbjct: 181 AARLDSQCL 189


>sp|METXA_HALGM|HOMOSERINE O-acetyltransferase|Haloferax gibbonsii (strain ATCC 33959

Query: 1 AARLVSECV 9
AARL S+C+
Sbjct: 181 AARLDSQCL 189


>sp|Y1508_SULAC|PROTEIN Saci_1508|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 RLVSECVH 10
R+V+EC++
Sbjct: 240 RIVNECIN 247




66|Sequence|326|335|SECVHALRTP

>sp|DAPB_METVS|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 3 CVHALR 8
C+HALR
Sbjct: 206 CIHALR 211


>sp|DAPB_METMP|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain DSM 14266

Query: 3 CVHALR 8
C+HALR
Sbjct: 206 CIHALR 211


>sp|DAPB_METM7|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain C7 /

Query: 3 CVHALR 8
C+HALR
Sbjct: 206 CIHALR 211


>sp|DAPB_METM6|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain C6 /

Query: 3 CVHALR 8
C+HALR
Sbjct: 206 CIHALR 211


>sp|DAPB_METM5|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain C5 /

Query: 3 CVHALR 8
C+HALR
Sbjct: 206 CIHALR 211


>sp|DAPB_META3|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 CVHALR 8
C+HALR
Sbjct: 207 CIHALR 212


>sp|RNP4_METVS|RIBONUCLEASE P protein component 4|Methanococcus vannielii (strain ATCC 35089

Query: 2 ECVHALRTP 10
EC H R P
Sbjct: 96 ECKHIFRIP 104


>sp|SYFB_THEPD|PHENYLALANINE--TRNA ligase beta subunit|Thermofilum pendens (strain DSM 2475

Query: 2 ECVHALRT 9
E HALRT
Sbjct: 409 EAYHALRT 416




67|Sequence|331|341|ALRTPIPKSNL

>sp|COBS_SACS2|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 TPIPKSNL 11
+PIP+SNL
Sbjct: 157 SPIPESNL 164


>sp|COBS_SACI6|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 TPIPKSNL 11
+PIP+SNL
Sbjct: 157 SPIPESNL 164


>sp|COBS_SACI4|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 TPIPKSNL 11
+PIP+SNL
Sbjct: 157 SPIPESNL 164


>sp|COBS_SACI3|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Saccharolobus islandicus (strain M.16.27)

Query: 4 TPIPKSNL 11
+PIP+SNL
Sbjct: 157 SPIPESNL 164


>sp|COBS_SACI7|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 TPIPKSNL 11
+PIP+SNL
Sbjct: 157 SPIPESNL 164


>sp|COBS_SACI2|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 TPIPKSNL 11
+PIP+SNL
Sbjct: 157 SPIPESNL 164


>sp|COBS_SACI1|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 TPIPKSNL 11
+PIP+SNL
Sbjct: 157 SPIPESNL 164


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 5 PIPKSN 10
PIPKSN
Sbjct: 236 PIPKSN 241


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 3 RTPIPKS 9
++PIPKS
Sbjct: 167 KSPIPKS 173


>sp|Y2248_HALVD|UNCHARACTERIZED motility-related protein HVO_2248|Haloferax volcanii (strain ATCC

Query: 1 ALRTPIPKSN 10
A+RTP+P +
Sbjct: 19 AVRTPLPNED 28


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LRTPIP 7
LRTP+P
Sbjct: 767 LRTPLP 772


>sp|G3P_HALVA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Haloarcula vallismortis (Halobacterium vallismortis)

Query: 1 ALRTPIPKSNL 11
A+R P+P ++
Sbjct: 235 AIRVPVPNGSI 245


>sp|GATD_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanothermobacter thermautotrophicus

Query: 2 LRTPIP 7
LRTP+P
Sbjct: 191 LRTPVP 196


>sp|AROE_HALWD|SHIKIMATE dehydrogenase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 3 RTPIPKSNL 11
+TP+P+S L
Sbjct: 196 QTPVPQSYL 204


>sp|AROE_NATPD|SHIKIMATE dehydrogenase (NADP(+))|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ALRTPIPKSNL 11
A TP+PK +L
Sbjct: 189 ADETPVPKRHL 199


>sp|PCNA_METAR|DNA polymerase sliding clamp|Methanocella arvoryzae (strain DSM 22066

Query: 2 LRTPIPKSNL 11
+R IP+SNL
Sbjct: 172 VRLEIPESNL 181






THE END