1|Sequence|1|10|MTFDDLKIQT
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 2 TFDDLKIQT 10
T DD+KI T
Sbjct: 407 TMDDIKIST 415
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 2 TFDDLKIQT 10
T DD+KI T
Sbjct: 407 TMDDIKIST 415
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 2 TFDDLKIQT 10
T DD+KI T
Sbjct: 407 TMDDIKIST 415
>sp|VE6_HPV28|PROTEIN E6|Human papillomavirus 28
Query: 1 MTFDDLKIQ 9
++FDDL++
Sbjct: 18 ISFDDLRLH 26
>sp|UL116_HCMVA|UNCHARACTERIZED protein UL116|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TFDDLK 7
TFDDL+
Sbjct: 145 TFDDLE 150
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 MTFDDLK 7
+TFD+LK
Sbjct: 1551 ITFDNLK 1557
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 MTFDDLK 7
+TFD+LK
Sbjct: 1551 ITFDNLK 1557
>sp|VU26_HHV7J|PROTEIN U26|Human herpesvirus 7 (strain JI)
Query: 3 FDDLKIQT 10
F+DLKI T
Sbjct: 61 FNDLKIIT 68
>sp|PG170_VAR67|PROTEIN OPG170|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 MTFDDL 6
MT+DDL
Sbjct: 112 MTYDDL 117
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 1 MTFDDLKI 8
+TFD LK+
Sbjct: 70 ITFDMLKV 77
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 1 MTFDDLK 7
+T+DD+K
Sbjct: 237 ITYDDVK 243
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 FDDLKI 8
FDD+K+
Sbjct: 2155 FDDVKV 2160
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 3 FDDLKI 8
FDD+K+
Sbjct: 2153 FDDVKV 2158
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 3 FDDLKI 8
FDD+K+
Sbjct: 2155 FDDVKV 2160
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 3 FDDLKI 8
FDD+K+
Sbjct: 2155 FDDVKV 2160
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 4 DDLKIQT 10
+DLKI+T
Sbjct: 26 EDLKIET 32
2|Sequence|6|15|LKIQTVKDQP
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 KIQTVKDQ 9
+IQ +KDQ
Sbjct: 2792 RIQALKDQ 2799
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 LKIQTVKDQP 10
LKI + +D+P
Sbjct: 119 LKISSHRDRP 128
>sp|REV_HV2SB|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 LKIQTVKDQP 10
L IQT+ D P
Sbjct: 79 LTIQTLPDPP 88
3|Sequence|11|20|VKDQPDEKSN
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 VKDQPDEKS 9
VKD+PDE++
Sbjct: 389 VKDRPDERN 397
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 5 PDEKSN 10
PDEK N
Sbjct: 1526 PDEKQN 1531
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 5 PDEKSN 10
PDEK N
Sbjct: 1526 PDEKQN 1531
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 1 VKDQPDEKS 9
+ D+P EKS
Sbjct: 146 IYDKPTEKS 154
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 5 PDEKS 9
PDEKS
Sbjct: 240 PDEKS 244
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 5 PDEKS 9
PDEKS
Sbjct: 237 PDEKS 241
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VKDQPDEKS 9
VK+QP +K+
Sbjct: 266 VKEQPQKKN 274
>sp|PG108_VAR67|ENVELOPE protein H3|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 VKDQPD 6
VKD PD
Sbjct: 53 VKDDPD 58
>sp|PG108_VACCC|ENVELOPE protein H3|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VKDQPD 6
VKD PD
Sbjct: 52 VKDDPD 57
4|Sequence|16|25|DEKSNGKKAK
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 DEKSNGKKA 9
DEKS G K+
Sbjct: 6732 DEKSGGSKS 6740
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 DEKSNG 6
DEK NG
Sbjct: 1527 DEKQNG 1532
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 DEKSNG 6
DEK NG
Sbjct: 1527 DEKQNG 1532
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 SNGKKAK 10
S+GK+AK
Sbjct: 191 SHGKRAK 197
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 EKSNGKKAK 10
EK+ GKK K
Sbjct: 933 EKAIGKKIK 941
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 EKSNGKKAK 10
EK+ GKK K
Sbjct: 933 EKAIGKKIK 941
5|Sequence|21|30|GKKAKGLQFL
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 1 GKKAKGLQFL 10
G K G QFL
Sbjct: 101 GNKYTGTQFL 110
6|Sequence|26|35|GLQFLYSPWW
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 2 LQFLYSPW 9
L+FLY+ W
Sbjct: 71 LRFLYTSW 78
>sp|US29_HCMVM|UNCHARACTERIZED protein US29|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 FLYSPWW 10
+LYS WW
Sbjct: 7 WLYSGWW 13
>sp|US29_HCMVA|UNCHARACTERIZED protein HHRF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 FLYSPWW 10
+LYS WW
Sbjct: 7 WLYSGWW 13
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 QFLYSPW 9
+FL +PW
Sbjct: 897 EFLEAPW 903
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 QFLYSPW 9
+FL +PW
Sbjct: 897 EFLEAPW 903
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 LQFLYSP 8
LQF+Y P
Sbjct: 719 LQFMYVP 725
>sp|YVAS_VACCC|UNCHARACTERIZED 7.5 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LQFLYS 7
L+FLYS
Sbjct: 20 LEFLYS 25
7|Sequence|31|40|YSPWWCLAAA
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 YSPWWCLA 8
++PWW A
Sbjct: 2840 FAPWWLCA 2847
Query: 2 SPWWCLA 8
S WW LA
Sbjct: 1987 SKWWLLA 1993
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 YSPWWCLA 8
++PWW A
Sbjct: 2840 FAPWWLCA 2847
Query: 2 SPWWCLA 8
S WW LA
Sbjct: 1987 SKWWLLA 1993
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 2 SPWWCLAA 9
SP+W L+A
Sbjct: 158 SPYWMLSA 165
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 PWWCL 7
PWW L
Sbjct: 2816 PWWLL 2820
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 PWWCL 7
PWW L
Sbjct: 2816 PWWLL 2820
>sp|UNG_HHV23|URACIL-DNA glycosylase|Human herpesvirus 2 (strain 333)
Query: 2 SPWWCLAAA 10
P WCL AA
Sbjct: 64 GPSWCLGAA 72
>sp|PG053_VARV|EFC-ASSOCIATED protein OPG053|Variola virus
Query: 1 YSPWWCLAAA 10
Y PW+ + A
Sbjct: 174 YDPWFLVGVA 183
>sp|PG053_VAR67|EFC-ASSOCIATED protein OPG053|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 YSPWWCLAAA 10
Y PW+ + A
Sbjct: 174 YDPWFLVGVA 183
>sp|PG053_VACCP|EFC-ASSOCIATED protein OPG053|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 YSPWWCLAAA 10
Y PW+ + A
Sbjct: 174 YDPWFLVGVA 183
>sp|PG053_VACCC|EFC-ASSOCIATED protein OPG053|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YSPWWCLAAA 10
Y PW+ + A
Sbjct: 174 YDPWFLVGVA 183
>sp|PG053_MONPV|EFC-ASSOCIATED protein OPG053|Monkeypox virus (MPXV)
Query: 1 YSPWWCLAAA 10
Y PW+ + A
Sbjct: 174 YDPWFLVGVA 183
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PWWCL 7
P WCL
Sbjct: 351 PLWCL 355
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PWWCL 7
P WCL
Sbjct: 351 PLWCL 355
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 1 YSPWWCLAA 9
Y+P CLA
Sbjct: 401 YTPGSCLAG 409
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 YSPWWCLAA 9
Y+P CLA
Sbjct: 401 YTPGSCLAG 409
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype
Query: 1 YSPWWCLA 8
Y +WC A
Sbjct: 65 YMSFWCRA 72
>sp|IR12_HCMVA|UNCHARACTERIZED protein IRL12|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SPWWCLAAA 10
S W CL+ A
Sbjct: 213 STWDCLSVA 221
8|Sequence|36|45|CLAAATLGVL
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 1 CLAAATLGV 9
CL AATL V
Sbjct: 984 CLEAATLAV 992
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 CLAAATLG 8
CLA T+G
Sbjct: 1462 CLAVVTIG 1469
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 LAAATLGVL 10
L ATLG+L
Sbjct: 2172 LGVATLGIL 2180
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 LAAATLGVL 10
L ATLG+L
Sbjct: 2172 LGVATLGIL 2180
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 3 AAATLG 8
AAATLG
Sbjct: 32 AAATLG 37
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 LAAATLGVL 10
L ATLGV+
Sbjct: 2170 LGLATLGVI 2178
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 LAAATLGVL 10
L ATLGV+
Sbjct: 2170 LGLATLGVI 2178
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 LAAATLGVL 10
L ATLGV+
Sbjct: 2171 LGIATLGVV 2179
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 1 CLAAATLGVL 10
C A AT G L
Sbjct: 225 CAALATFGHL 234
>sp|NCAP_VSIVS|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 CLAAATLGVL 10
C A AT G L
Sbjct: 225 CAALATFGHL 234
>sp|NCAP_VSIVN|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 CLAAATLGVL 10
C A AT G L
Sbjct: 225 CAALATFGHL 234
>sp|NCAP_VSIVG|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 CLAAATLGVL 10
C A AT G L
Sbjct: 225 CAALATFGHL 234
>sp|NCAP_VSIVC|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 CLAAATLGVL 10
C A AT G L
Sbjct: 225 CAALATFGHL 234
>sp|NCAP_VSIVA|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 CLAAATLGVL 10
C A AT G L
Sbjct: 225 CAALATFGHL 234
9|Sequence|41|50|TLGVLCLGLV
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 TLGVLCLGLV 10
T+GVLCL ++
Sbjct: 1134 TMGVLCLAIL 1143
Query: 3 GVLCLGLV 10
GV+ +GLV
Sbjct: 1350 GVMAVGLV 1357
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 TLGVLCLGLV 10
T+GVLCL ++
Sbjct: 1134 TMGVLCLAIL 1143
Query: 3 GVLCLGLV 10
GV+ +GLV
Sbjct: 1350 GVMAVGLV 1357
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 TLGVLCLGLV 10
T+GVLCL ++
Sbjct: 1134 TMGVLCLAIL 1143
Query: 3 GVLCLGLV 10
GV+ +GLV
Sbjct: 1350 GVMAVGLV 1357
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 TLGVLCLGLV 10
T+GVLCL ++
Sbjct: 1134 TMGVLCLAIL 1143
Query: 2 LGVLCLGLV 10
+GV CL L+
Sbjct: 1195 MGVTCLALI 1203
Query: 3 GVLCLGLV 10
GV+ +GLV
Sbjct: 1350 GVMAVGLV 1357
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 TLGVLCLGLV 10
T+GVLCL ++
Sbjct: 1134 TMGVLCLAIL 1143
Query: 3 GVLCLGLV 10
GV+ +GLV
Sbjct: 1350 GVMAVGLV 1357
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 TLGVLC 6
TLGVLC
Sbjct: 742 TLGVLC 747
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 TLGVLC 6
TLGVLC
Sbjct: 742 TLGVLC 747
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 TLGVLCLG 8
T GVLCL
Sbjct: 537 TCGVLCLA 544
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 TLGVLC 6
TLG+LC
Sbjct: 743 TLGILC 748
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 1 TLGVLC 6
TLG+LC
Sbjct: 743 TLGILC 748
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 TLGVLCLGLV 10
+LG+LC+ ++
Sbjct: 1136 SLGILCVSIM 1145
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 TLGVLCLGL 9
++G+LCL L
Sbjct: 1135 SMGLLCLTL 1143
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 TLGVLCLGL 9
++G+LCL L
Sbjct: 1135 SMGLLCLTL 1143
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 TLGVLCLGL 9
++G+LCL L
Sbjct: 1135 SMGLLCLTL 1143
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 TLGVLCLGL 9
++G+LCL L
Sbjct: 1135 SMGLLCLTL 1143
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 TLGVLCLGL 9
++G+LCL L
Sbjct: 1135 SMGLLCLTL 1143
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 1 TLGVLC 6
T+GVLC
Sbjct: 734 TIGVLC 739
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 TLGVLCLGLV 10
T+G LCL +V
Sbjct: 784 TMGNLCLRVV 793
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 TLGVLCLGLV 10
+LG+LC+ ++
Sbjct: 1136 SLGLLCISIM 1145
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 TLGVLCLGLV 10
+LG+LC+ ++
Sbjct: 1135 SLGLLCISIM 1144
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 TLGVLC 6
TLG+LC
Sbjct: 744 TLGLLC 749
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 LGVLCLGLV 10
L +LCLG++
Sbjct: 1148 LTLLCLGVL 1156
>sp|NEC2_HHV8P|NUCLEAR egress protein 2|Human herpesvirus 8 type P
Query: 2 LGVLCLGLV 10
+ LCLGLV
Sbjct: 258 IAFLCLGLV 266
>sp|VP1_POVWU|MAJOR capsid protein VP1|WU polyomavirus (WUPyV)
Query: 2 LGVLCL 7
+G+LCL
Sbjct: 253 IGILCL 258
>sp|VP1_POVKI|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 350)
Query: 2 LGVLCL 7
+G+LCL
Sbjct: 261 IGILCL 266
>sp|VP1_POVK6|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 60)
Query: 2 LGVLCL 7
+G+LCL
Sbjct: 261 IGILCL 266
>sp|VP1_POVK3|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 380)
Query: 2 LGVLCL 7
+G+LCL
Sbjct: 261 IGILCL 266
>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 TLGVLCLGLV 10
++ LC+GL+
Sbjct: 501 SIAALCIGLI 510
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 LCLGL 9
LCLGL
Sbjct: 205 LCLGL 209
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 6 CLGLV 10
CLGLV
Sbjct: 166 CLGLV 170
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 6 CLGLV 10
CLGLV
Sbjct: 166 CLGLV 170
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 LGVLC 6
LGVLC
Sbjct: 736 LGVLC 740
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 LGVLC 6
LGVLC
Sbjct: 736 LGVLC 740
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 LGVLCLGLV 10
+GVL LG++
Sbjct: 1312 IGVLTLGIL 1320
>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New
Query: 1 TLGVLCL 7
T+G +CL
Sbjct: 9 TIGTICL 15
>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New
Query: 1 TLGVLCL 7
T+G +CL
Sbjct: 9 TIGTICL 15
>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 TLGVLCL 7
T+G +CL
Sbjct: 9 TIGTICL 15
>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 TLGVLCL 7
T+G +CL
Sbjct: 9 TIGTICL 15
>sp|DUT_HHV7J|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 7 (strain JI)
Query: 4 VLCLGLV 10
+LC GLV
Sbjct: 302 ILCHGLV 308
>sp|VP7_ROTH6|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 TLGVLCL 7
TLG+ CL
Sbjct: 202 TLGIGCL 208
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 1 TLGVLCLGLV 10
TLG LC V
Sbjct: 768 TLGHLCQSFV 777
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 LGVLCLGLV 10
LG+L GLV
Sbjct: 1171 LGLLVTGLV 1179
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 1 TLGVLCLGLV 10
++ LC+GL+
Sbjct: 501 SIASLCIGLI 510
10|Sequence|46|55|CLGLVVTIMV
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 LGLVVTIMV 10
LGLVVT +V
Sbjct: 1173 LGLVVTGLV 1181
>sp|US9_HHV2H|ENVELOPE protein US9|Human herpesvirus 2 (strain HG52)
Query: 1 CLGLVVTIMV 10
C+GLV+ +V
Sbjct: 63 CVGLVIACLV 72
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 1 CLGLVVTIM 9
CL L+V ++
Sbjct: 327 CLSLIVNLL 335
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 1 CLGLVVTIM 9
CL L+V ++
Sbjct: 327 CLSLIVNLL 335
11|Sequence|51|60|VTIMVLGMQL
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 TIMVLGM 8
TIM+LG+
Sbjct: 2173 TIMLLGL 2179
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 TIMVLGM 8
TIM+LG+
Sbjct: 2173 TIMLLGL 2179
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 TIMVLGM 8
TIM+LG+
Sbjct: 2169 TIMLLGL 2175
12|Sequence|56|65|LGMQLSQVSD
>sp|MCES_YMTV5|MRNA-CAPPING enzyme small subunit|Yaba monkey tumor virus (strain
Query: 3 MQLSQVSD 10
+QLS+V+D
Sbjct: 45 LQLSRVND 52
13|Sequence|61|70|SQVSDLLTQE
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 2 QVSDLLTQE 10
+VSD LT+E
Sbjct: 452 EVSDELTEE 460
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 2 QVSDLLTQE 10
+VSD LT+E
Sbjct: 452 EVSDELTEE 460
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 2 QVSDLLTQ 9
QVSDLL +
Sbjct: 915 QVSDLLVK 922
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 QVSDLLTQ 9
QVSDLL +
Sbjct: 915 QVSDLLVK 922
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 4 SDLLTQE 10
+DLLTQ+
Sbjct: 288 ADLLTQQ 294
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 QVSDLLTQE 10
+V+D+ TQE
Sbjct: 1150 RVADMKTQE 1158
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 4 SDLLTQ 9
SDLLTQ
Sbjct: 1011 SDLLTQ 1016
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 VSDLLT 8
VSDLLT
Sbjct: 887 VSDLLT 892
14|Sequence|66|75|LLTQEQANLT
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 LLTQEQA 7
+LTQEQA
Sbjct: 2053 VLTQEQA 2059
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 LLTQEQANL 9
++TQE AN+
Sbjct: 92 IVTQEAANI 100
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 LLTQEQANL 9
+ TQE AN+
Sbjct: 92 ITTQESANV 100
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 LLTQEQANL 9
+ TQE AN+
Sbjct: 92 ITTQEAANI 100
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 LLTQEQANL 9
+ TQE AN+
Sbjct: 92 ITTQESANV 100
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 LLTQEQANL 9
+ TQE AN+
Sbjct: 92 ITTQEAANI 100
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 LLTQEQANL 9
+ TQE AN+
Sbjct: 92 ITTQESANV 100
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 LLTQEQANL 9
+ TQE AN+
Sbjct: 92 ITTQEAANI 100
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 LLTQEQANL 9
+ TQE AN+
Sbjct: 92 ITTQEAANI 100
15|Sequence|71|80|QANLTHQKKK
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 1 QANLTHQK 8
Q NL+H K
Sbjct: 408 QCNLSHTK 415
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 1 QANLTHQK 8
Q NL+H K
Sbjct: 407 QCNLSHTK 414
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 ANLTHQ 7
ANLTH+
Sbjct: 1288 ANLTHR 1293
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 ANLTHQ 7
ANLTH+
Sbjct: 1288 ANLTHR 1293
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 NLTHQKK 9
NLT+Q+K
Sbjct: 396 NLTNQRK 402
16|Sequence|76|85|HQKKKLEGQI
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 HQKKKLEGQI 10
HQ +L GQI
Sbjct: 1271 HQTMQLSGQI 1280
>sp|LF3_EBVG|UNCHARACTERIZED protein LF3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 HQKKKLEGQI 10
H +LEGQ+
Sbjct: 892 HAAYRLEGQV 901
>sp|LF3_EBVB9|UNCHARACTERIZED protein LF3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 HQKKKLEGQI 10
H +LEGQ+
Sbjct: 892 HAAYRLEGQV 901
>sp|NS1_I56A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 2 QKKKLEG 8
QK+K+EG
Sbjct: 218 QKQKMEG 224
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 QKKKLEG 8
+KKKL+G
Sbjct: 289 EKKKLDG 295
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 QKKKLEG 8
+KKKL+G
Sbjct: 289 EKKKLDG 295
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 1 HQKKKLEGQI 10
HQ+ EG+I
Sbjct: 633 HQQNASEGKI 642
17|Sequence|81|90|LEGQISARQQ
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 EGQISARQQ 10
+GQ++ RQQ
Sbjct: 229 QGQLAGRQQ 237
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 EGQISARQQ 10
+GQ++ RQQ
Sbjct: 229 QGQLAGRQQ 237
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 2 EGQISARQQ 10
+GQ++ RQQ
Sbjct: 229 QGQLAGRQQ 237
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 EGQISARQQ 10
+GQ++ RQQ
Sbjct: 229 QGQLAGRQQ 237
18|Sequence|86|95|SARQQAEEAS
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 SARQQAEEAS 10
S+RQ +EE S
Sbjct: 1962 SSRQWSEEVS 1971
19|Sequence|91|100|AEEASQESEN
>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQE +N
Sbjct: 306 AEQASQEVKN 315
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQE +N
Sbjct: 306 AEQASQEVKN 315
>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQE +N
Sbjct: 306 AEQASQEVKN 315
>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQE +N
Sbjct: 306 AEQASQEVKN 315
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQE +N
Sbjct: 306 AEQASQEVKN 315
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQE +N
Sbjct: 306 AEQASQEVKN 315
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQE +N
Sbjct: 306 AEQASQEVKN 315
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQE +N
Sbjct: 306 AEQASQEVKN 315
>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQE +N
Sbjct: 306 AEQASQEVKN 315
>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQE +N
Sbjct: 309 AEQASQEVKN 318
>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQE +N
Sbjct: 306 AEQASQEVKN 315
>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQE +N
Sbjct: 306 AEQASQEVKN 315
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQE +N
Sbjct: 306 AEQASQEVKN 315
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQE +N
Sbjct: 306 AEQASQEVKN 315
>sp|GAG_HV1W2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+A+QE +N
Sbjct: 306 AEQATQEVKN 315
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQE +N
Sbjct: 306 AEQASQEVKN 315
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+A+QE +N
Sbjct: 312 AEQATQEVKN 321
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQE +N
Sbjct: 306 AEQASQEVKN 315
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+A+QE +N
Sbjct: 302 AEQATQEVKN 311
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+A+QE +N
Sbjct: 305 AEQATQEVKN 314
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+A+QE +N
Sbjct: 305 AEQATQEVKN 314
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+A+QE +N
Sbjct: 308 AEQATQEVKN 317
>sp|US01_HCMVA|UNCHARACTERIZED protein HQLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 EEASQESEN 10
E ASQ++EN
Sbjct: 144 ERASQQAEN 152
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQE +N
Sbjct: 309 AEQASQEVKN 318
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+A+QE +N
Sbjct: 306 AEQATQEVKN 315
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQE +N
Sbjct: 306 AEQASQEVKN 315
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQE +N
Sbjct: 306 AEQASQEVKN 315
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQE +N
Sbjct: 306 AEQASQEVKN 315
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQE +N
Sbjct: 306 AEQASQEVKN 315
>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQ+ +N
Sbjct: 306 AEQASQDVKN 315
>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQ+ +N
Sbjct: 306 AEQASQDVKN 315
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQ+ +N
Sbjct: 306 AEQASQDVKN 315
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQE +N
Sbjct: 306 AEQASQEVKN 315
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQ+ +N
Sbjct: 308 AEQASQDVKN 317
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+ASQ+ +N
Sbjct: 303 AEQASQDVKN 312
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EEASQESEN 10
EEA + EN
Sbjct: 639 EEAQNQQEN 647
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+A+QE +N
Sbjct: 305 AEQATQEVKN 314
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+A+QE +N
Sbjct: 302 AEQATQEVKN 311
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AEEASQESEN 10
AE+A+QE +N
Sbjct: 308 AEQATQEVKN 317
20|Sequence|96|105|QESENELKEM
>sp|NSP5_ROTHC|NON-STRUCTURAL protein 5|Rotavirus C (isolate RVC/Human/United
Query: 1 QESENELKEM 10
+E+ENE+ EM
Sbjct: 129 KETENEITEM 138
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 QESENELK 8
Q+SEN++K
Sbjct: 170 QQSENDIK 177
>sp|NEC2_HHV7J|NUCLEAR egress protein 2|Human herpesvirus 7 (strain JI)
Query: 1 QESENELKE 9
QES+N +KE
Sbjct: 92 QESQNIVKE 100
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 4 ENELKEM 10
ENELK++
Sbjct: 225 ENELKQL 231
21|Sequence|101|110|ELKEMIETLA
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 LKEMIE 7
LKEM+E
Sbjct: 822 LKEMVE 827
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 LKEMIETL 9
LKE I+TL
Sbjct: 2142 LKESIDTL 2149
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 1 ELKEMIETL 9
ELK+MI+ +
Sbjct: 287 ELKQMIDNM 295
22|Sequence|106|115|IETLARKLNE
>sp|VE2_HPV70|REGULATORY protein E2|Human papillomavirus type 70
Query: 1 IETLARKLN 9
+ETL+++LN
Sbjct: 6 METLSQRLN 14
>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR++ E
Sbjct: 255 VETLARRICE 264
>sp|VE2_HPV31|REGULATORY protein E2|Human papillomavirus 31
Query: 1 IETLARKLN 9
+ETL+++LN
Sbjct: 1 METLSQRLN 9
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 3 TLARKLNE 10
T+ARK+ E
Sbjct: 217 TMARKIGE 224
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 3 TLARKLNE 10
T+ARK+ E
Sbjct: 217 TMARKIGE 224
>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16
Query: 1 IETLARKLN 9
+ETL ++LN
Sbjct: 1 METLCQRLN 9
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 IETLARKL 8
IET+AR++
Sbjct: 945 IETIARQI 952
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I01A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARNICE 264
>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARNICE 264
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|RDRP_I01A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IETLARKLNE 10
+ETLAR + E
Sbjct: 255 VETLARSICE 264
>sp|VE2_HPV51|REGULATORY protein E2|Human papillomavirus 51
Query: 1 IETLARKLN 9
+ETL +LN
Sbjct: 1 METLCHRLN 9
23|Sequence|111|120|RKLNEKSKEQ
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 RKLNEKSKEQ 10
RKLN +KE+
Sbjct: 2524 RKLNGCTKEE 2533
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 RKLNEKSKEQ 10
R+LN +KE+
Sbjct: 2525 RRLNNCTKEE 2534
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 RKLNEKSKEQ 10
R+LN +KE+
Sbjct: 2525 RRLNNCTKEE 2534
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 RKLNEKSKEQ 10
R+LN +KE+
Sbjct: 2525 RRLNNCTKEE 2534
24|Sequence|116|125|KSKEQMELHH
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 2 SKEQMELHH 10
SK+QM ++H
Sbjct: 592 SKQQMLMNH 600
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 2 SKEQMELHH 10
SK+QM ++H
Sbjct: 592 SKQQMLMNH 600
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 SKEQMELHH 10
SK+QM ++H
Sbjct: 592 SKQQMLMNH 600
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SKEQMELHH 10
SK+QM ++H
Sbjct: 592 SKQQMLMNH 600
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 3 KEQMELHH 10
+EQM L H
Sbjct: 253 REQMYLRH 260
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 EQMELHH 10
EQM HH
Sbjct: 3042 EQMAPHH 3048
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 EQMELHH 10
EQM HH
Sbjct: 3042 EQMAPHH 3048
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 EQMELHH 10
EQM HH
Sbjct: 3042 EQMAPHH 3048
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 2 SKEQMELH 9
SKE MEL+
Sbjct: 845 SKENMELY 852
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 EQMELHH 10
EQM HH
Sbjct: 3042 EQMAPHH 3048
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 2 SKEQMELH 9
SKE MEL+
Sbjct: 845 SKENMELY 852
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 EQMELHH 10
EQM HH
Sbjct: 3042 EQMAPHH 3048
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KSKEQMELHH 10
+S+EQ + HH
Sbjct: 339 ESEEQTDGHH 348
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 1 KSKEQMELHH 10
+S+EQ + HH
Sbjct: 470 ESEEQTDGHH 479
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KSKEQMELHH 10
+S+EQ + HH
Sbjct: 408 ESEEQTDGHH 417
25|Sequence|121|130|MELHHQNLNL
>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2
Query: 1 MELHHQNLN 9
+ LHHQ LN
Sbjct: 204 VSLHHQQLN 212
>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2
Query: 1 MELHHQNLN 9
+ LHHQ LN
Sbjct: 204 VSLHHQQLN 212
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 3 LHHQNLN 9
LH QNLN
Sbjct: 266 LHKQNLN 272
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 1 MELHHQNLN 9
+ LHHQ LN
Sbjct: 204 VSLHHQQLN 212
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 3 LHHQNLN 9
LHHQ L+
Sbjct: 200 LHHQQLD 206
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 3 LHHQNLN 9
LHHQ L+
Sbjct: 200 LHHQQLD 206
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 3 LHHQNLN 9
LHHQ L+
Sbjct: 200 LHHQQLD 206
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 3 LHHQNLN 9
LHHQ L+
Sbjct: 200 LHHQQLD 206
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 3 LHHQNLN 9
LHHQ L+
Sbjct: 200 LHHQQLD 206
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 3 LHHQNLN 9
LHHQ L+
Sbjct: 200 LHHQQLD 206
>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1
Query: 3 LHHQNLN 9
LHHQ L+
Sbjct: 200 LHHQQLD 206
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 3 LHHQNL 8
LHHQ L
Sbjct: 193 LHHQQL 198
>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3
Query: 3 LHHQNL 8
LHHQ L
Sbjct: 193 LHHQQL 198
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 ELHHQNLNL 10
E+ H N+NL
Sbjct: 144 EVSHLNINL 152
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 3 LHHQNL 8
LHHQ L
Sbjct: 193 LHHQQL 198
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 LHHQNLN 9
LHHQ L+
Sbjct: 200 LHHQQLD 206
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 4 HHQNLN 9
HH+N N
Sbjct: 432 HHKNTN 437
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 LHHQNLN 9
LHHQ L+
Sbjct: 200 LHHQQLD 206
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 LHHQNLN 9
LHHQ L+
Sbjct: 200 LHHQQLD 206
>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)
Query: 1 MELHHQNLN 9
++LH +NLN
Sbjct: 70 LKLHLKNLN 78
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 LHHQNL 8
LHHQ L
Sbjct: 193 LHHQQL 198
>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain
Query: 1 MELHH 5
+ELHH
Sbjct: 66 LELHH 70
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 LHHQNLNL 10
+H+Q++NL
Sbjct: 4746 VHNQDVNL 4753
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 LHHQNLNL 10
+H+Q++NL
Sbjct: 4723 VHNQDVNL 4730
>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3
Query: 3 LHHQNL 8
LHHQ L
Sbjct: 193 LHHQQL 198
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 MELHHQNLN 9
+E++H++LN
Sbjct: 548 VEINHKSLN 556
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 LHHQNL 8
LHHQ L
Sbjct: 193 LHHQQL 198
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 3 LHHQNLNL 10
LH+ N NL
Sbjct: 424 LHNMNANL 431
26|Sequence|126|135|QNLNLQETLK
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 NLNLQE 7
N+NLQE
Sbjct: 665 NINLQE 670
>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3
Query: 1 QNLNLQETL 9
NLN+QE L
Sbjct: 4 HNLNVQELL 12
>sp|VP2_NVN68|MINOR capsid protein VP2|Norovirus (strain Human/NoV/United
Query: 1 QNLNLQE 7
QNL LQE
Sbjct: 37 QNLQLQE 43
27|Sequence|131|140|QETLKRVANC
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 5 KRVANC 10
KR++NC
Sbjct: 356 KRISNC 361
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 2 ETLKRVAN 9
E L+RV+N
Sbjct: 383 EVLRRVSN 390
28|Sequence|136|145|RVANCSAPCP
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 1 RVANCSAPCP 10
R ++C CP
Sbjct: 274 RTSDCDTTCP 283
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 2 VANCSAPCP 10
VAN S P P
Sbjct: 340 VANSSRPVP 348
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 4 NCSAP 8
NCS+P
Sbjct: 1899 NCSSP 1903
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 4 NCSAP 8
NCS+P
Sbjct: 1899 NCSSP 1903
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 4 NCSAP 8
NCS+P
Sbjct: 1899 NCSSP 1903
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 4 NCSAP 8
NCS+P
Sbjct: 1899 NCSSP 1903
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 4 NCSAP 8
NCS+P
Sbjct: 1899 NCSSP 1903
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 4 NCSAP 8
NCS+P
Sbjct: 1899 NCSSP 1903
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 4 NCSAP 8
NCS+P
Sbjct: 1899 NCSSP 1903
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 4 NCSAP 8
NCS+P
Sbjct: 1899 NCSSP 1903
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 4 NCSAP 8
NCS+P
Sbjct: 1900 NCSSP 1904
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 4 NCSAP 8
NCS+P
Sbjct: 1899 NCSSP 1903
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 4 NCSAP 8
NCS+P
Sbjct: 1899 NCSSP 1903
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 4 NCSAP 8
NCS+P
Sbjct: 1900 NCSSP 1904
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 VANCSAP 8
VAN SAP
Sbjct: 5587 VANLSAP 5593
>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)
Query: 3 ANCSAPC 9
A C APC
Sbjct: 106 ALCRAPC 112
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 VANCSAP 8
VAN SAP
Sbjct: 5529 VANLSAP 5535
>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 VANCSAPC 9
V NC+AP
Sbjct: 369 VTNCTAPL 376
>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 VANCSAP 8
V NC+AP
Sbjct: 369 VTNCTAP 375
>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 VANCSAP 8
V NC+AP
Sbjct: 369 VTNCTAP 375
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 ANCSAPC 9
++C+APC
Sbjct: 1966 SDCTAPC 1972
>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 ANCSAPC 9
A C APC
Sbjct: 106 ALCRAPC 112
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 NCSAP 8
NC+AP
Sbjct: 1156 NCNAP 1160
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 1 RVANCSAPCP 10
+V+NCS P
Sbjct: 124 QVSNCSTNIP 133
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 NCSAP 8
NC+AP
Sbjct: 1156 NCNAP 1160
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 NCSAPCP 10
NCS CP
Sbjct: 140 NCSIVCP 146
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 4 NCSAPC 9
NC+A C
Sbjct: 1821 NCTAEC 1826
>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)
Query: 4 NCSAPCP 10
NCS CP
Sbjct: 140 NCSIVCP 146
29|Sequence|141|150|SAPCPQDWIW
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 4 CPQDWI 9
CP+DWI
Sbjct: 85 CPEDWI 90
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 1 SAPCPQDWIW 10
+AP P WIW
Sbjct: 598 NAPAPPGWIW 607
>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)
Query: 4 CPQDWI 9
CP+DW+
Sbjct: 85 CPEDWV 90
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 SAPCPQDWIW 10
S PC + W+W
Sbjct: 1969 STPCAESWLW 1978
>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)
Query: 4 CPQDWI 9
CP DW+
Sbjct: 85 CPDDWV 90
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 4 CPQDW 8
CP+DW
Sbjct: 85 CPEDW 89
>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)
Query: 4 CPQDW 8
CP+DW
Sbjct: 85 CPEDW 89
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 4 CPQDW 8
CP+DW
Sbjct: 85 CPEDW 89
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 4 CPQDW 8
CP+DW
Sbjct: 85 CPEDW 89
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 4 CPQDW 8
CP+DW
Sbjct: 85 CPEDW 89
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 4 CPQDW 8
CP+DW
Sbjct: 85 CPEDW 89
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 4 CPQDW 8
CP+DW
Sbjct: 85 CPEDW 89
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 4 CPQDW 8
CP+DW
Sbjct: 85 CPEDW 89
>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)
Query: 4 CPQDW 8
CP+DW
Sbjct: 85 CPEDW 89
>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)
Query: 4 CPQDW 8
CP+DW
Sbjct: 85 CPEDW 89
>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)
Query: 4 CPQDW 8
CP+DW
Sbjct: 85 CPEDW 89
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 4 CPQDW 8
CP+DW
Sbjct: 85 CPEDW 89
>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 4 CPQDW 8
CP+DW
Sbjct: 85 CPEDW 89
>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 4 CPQDW 8
CP+DW
Sbjct: 85 CPEDW 89
>sp|A40_VACCC|PROTEIN A40|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 CPQDWI 9
CP DWI
Sbjct: 56 CPTDWI 61
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 3 PCPQDWIW 10
P P WIW
Sbjct: 599 PAPPGWIW 606
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 1 SAPCPQDWI 9
S PC DW+
Sbjct: 224 SLPCDCDWL 232
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 1 SAPCPQDWI 9
S PC DW+
Sbjct: 259 SLPCDCDWL 267
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 1 SAPCPQDWI 9
S PC DW+
Sbjct: 287 SLPCDCDWL 295
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 1 SAPCPQDWI 9
S PC DW+
Sbjct: 287 SLPCDCDWL 295
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 1 SAPCPQDWIW 10
+ P P W+W
Sbjct: 597 NGPPPSGWVW 606
>sp|HBZ_HTL1C|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 3 PCPQD 7
PCP+D
Sbjct: 16 PCPED 20
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 1 SAPCPQDWI 9
S PC DW+
Sbjct: 262 SLPCDCDWL 270
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 3 PCPQDW 8
P P DW
Sbjct: 43 PLPTDW 48
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 CPQDWIW 10
C Q WIW
Sbjct: 10 CQQWWIW 16
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 4 CPQDWI 9
CP WI
Sbjct: 247 CPHQWI 252
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 4 CPQDWI 9
CP WI
Sbjct: 247 CPHQWI 252
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 4 CPQDWI 9
CP WI
Sbjct: 247 CPHQWI 252
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 APCPQDWI 9
+PC DW+
Sbjct: 97 SPCDADWL 104
Query: 3 PCPQDWI 9
P P DW+
Sbjct: 1019 PSPTDWL 1025
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 4 CPQDWI 9
CP WI
Sbjct: 247 CPHQWI 252
>sp|MATRX_ABLVB|MATRIX protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 APCPQDWIW 10
APCP+ W
Sbjct: 114 APCPEGMNW 122
>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 SAPCPQD 7
S PCP+D
Sbjct: 258 SGPCPKD 264
>sp|HBZ_HTL1L|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 3 PCPQD 7
PCP+D
Sbjct: 16 PCPED 20
>sp|TAX_HTL1L|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 SAPCPQD 7
S PCP+D
Sbjct: 257 SGPCPKD 263
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 APCPQDW 8
AP P+ W
Sbjct: 743 APVPEKW 749
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 APCPQDW 8
AP P+ W
Sbjct: 743 APVPEKW 749
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 4 CPQDWI 9
CP WI
Sbjct: 247 CPHQWI 252
>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 SAPCPQD 7
S PCP+D
Sbjct: 258 SGPCPKD 264
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 APCPQDW 8
AP P++W
Sbjct: 724 APNPKEW 730
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 1 SAPCPQDW 8
+ PCP D+
Sbjct: 144 TGPCPGDY 151
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 APCPQDW 8
AP P++W
Sbjct: 724 APNPKEW 730
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 SAPCPQD 7
S PCP+D
Sbjct: 258 SGPCPKD 264
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 APCPQDW 8
AP P+ W
Sbjct: 740 APTPKSW 746
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 APCPQDW 8
AP P+ W
Sbjct: 740 APTPKSW 746
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 3 PCPQD 7
PCP+D
Sbjct: 226 PCPED 230
>sp|BNL2A_EBVG|PROTEIN BNLF2a|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SAPCPQD 7
S PCP+D
Sbjct: 29 SHPCPED 35
>sp|BNL2A_EBVB9|PROTEIN BNLF2a|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SAPCPQD 7
S PCP+D
Sbjct: 29 SHPCPED 35
>sp|BNL2A_EBVA8|PROTEIN BNLF2a|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SAPCPQD 7
S PCP+D
Sbjct: 29 SHPCPED 35
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 SAPCPQDW 8
+ PCP D+
Sbjct: 144 TGPCPGDY 151
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 SAPCPQDW 8
+ PCP D+
Sbjct: 144 TGPCPGDY 151
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 SAPCPQDW 8
+ PCP D+
Sbjct: 144 TGPCPGDY 151
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 5 PQDWI 9
P+DWI
Sbjct: 581 PKDWI 585
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 5 PQDWIW 10
P+D IW
Sbjct: 545 PKDLIW 550
>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain
Query: 2 APCP 5
APCP
Sbjct: 173 APCP 176
>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain AD169)
Query: 2 APCP 5
APCP
Sbjct: 173 APCP 176
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 5 PQDWI 9
P+DW+
Sbjct: 1358 PKDWV 1362
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 SAPCPQDW 8
+ PCP D+
Sbjct: 144 TGPCPGDY 151
>sp|TRX1_EBVB9|TRIPLEX capsid protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PCPQD 7
PCP D
Sbjct: 257 PCPAD 261
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 APCPQDWI 9
+PC DW+
Sbjct: 1976 SPCSDDWL 1983
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 SAPCPQDW 8
+ PCP D+
Sbjct: 144 TGPCPGDY 151
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 SAPCPQDW 8
+ PCP D+
Sbjct: 144 TGPCPGDY 151
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 2 APCP 5
APCP
Sbjct: 613 APCP 616
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 CPQDWIW 10
CP W W
Sbjct: 10 CPNLWKW 16
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 APCPQDWI 9
+PC DW+
Sbjct: 1976 SPCSGDWL 1983
>sp|YVBH_VACCC|UNCHARACTERIZED 7.4 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SAPCPQDWI 9
S PCP D +
Sbjct: 44 SLPCPGDTL 52
>sp|MCE_VAR67|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Variola virus (isolate
Query: 3 PCPQDWI 9
P P WI
Sbjct: 179 PFPDQWI 185
>sp|MCE_VACCC|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 3 PCPQDWI 9
P P WI
Sbjct: 179 PFPDQWI 185
>sp|MCE_VACCA|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 3 PCPQDWI 9
P P WI
Sbjct: 179 PFPDQWI 185
>sp|MCE_MONPV|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Monkeypox virus (MPXV)
Query: 3 PCPQDWI 9
P P WI
Sbjct: 179 PFPDQWI 185
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 4 CPQDWIW 10
CP +W
Sbjct: 1264 CPPSLVW 1270
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 PQDWI 9
P DWI
Sbjct: 579 PSDWI 583
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 APCPQDWI 9
+PC DW+
Sbjct: 1978 SPCNGDWL 1985
>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 SAPCPQD 7
S PCP++
Sbjct: 258 SGPCPKE 264
>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)
Query: 3 PCPQDW 8
P P++W
Sbjct: 31 PFPEEW 36
>sp|TAX_HTL32|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 SAPCPQD 7
S PCP++
Sbjct: 258 SGPCPKE 264
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SAPCPQDWIW 10
+A CP+ +W
Sbjct: 493 AARCPRTGLW 502
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 5 PQDWIW 10
P+DW++
Sbjct: 95 PEDWLY 100
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 SAPCPQDWI 9
+APC W+
Sbjct: 1969 TAPCAGSWL 1977
>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)
Query: 1 SAPCPQD 7
+ PCP D
Sbjct: 145 TGPCPGD 151
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SAPCPQDWIW 10
+A CP+ +W
Sbjct: 493 AARCPRTGLW 502
>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain
Query: 1 SAPCPQD 7
+ PCP D
Sbjct: 145 TGPCPGD 151
>sp|11K_PAVHV|HOST-MODULATION protein 11K|Human parvovirus B19 (strain HV)
Query: 1 SAPCPQ 6
S PCPQ
Sbjct: 29 SPPCPQ 34
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 PCPQDWIW 10
PC + +W
Sbjct: 931 PCTLEGVW 938
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 APCPQDWI 9
APC W+
Sbjct: 1970 APCASSWL 1977
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 SAPCPQDWI 9
S PC W+
Sbjct: 1970 STPCSSSWL 1978
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 SAPCPQDWI 9
S PC W+
Sbjct: 1974 STPCASSWL 1982
30|Sequence|146|155|QDWIWHGENC
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 3 WIWHGE 8
W WHGE
Sbjct: 234 WGWHGE 239
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 WIWH 6
WIWH
Sbjct: 2801 WIWH 2804
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 WIWH 6
WIWH
Sbjct: 2801 WIWH 2804
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 QDWIWHGENC 10
Q WI +G NC
Sbjct: 4358 QYWIGYGCNC 4367
Query: 2 DWIW 5
DW+W
Sbjct: 2286 DWLW 2289
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 QDWIWHGENC 10
Q WI +G NC
Sbjct: 4358 QYWIGYGCNC 4367
Query: 2 DWIW 5
DW+W
Sbjct: 2286 DWLW 2289
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 QDWIWH 6
++WIW+
Sbjct: 731 KNWIWY 736
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 WIWHGE 8
W +HGE
Sbjct: 174 WTFHGE 179
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 3 WIWHGE 8
W +HGE
Sbjct: 174 WTFHGE 179
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 WIWHGE 8
W +HGE
Sbjct: 174 WTFHGE 179
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 WIWHGE 8
W +HGE
Sbjct: 174 WTFHGE 179
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 WIWHGE 8
W +HGE
Sbjct: 174 WTFHGE 179
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 WIWHGE 8
W +HGE
Sbjct: 174 WTFHGE 179
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 WIWHGE 8
W +HGE
Sbjct: 174 WTFHGE 179
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 WIWHGE 8
W +HGE
Sbjct: 174 WTFHGE 179
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 WIWHGE 8
W +HGE
Sbjct: 174 WTFHGE 179
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 WIWHGE 8
W +HGE
Sbjct: 174 WTFHGE 179
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 WIWHGE 8
W +HGE
Sbjct: 174 WTFHGE 179
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 WIWHGE 8
W +HGE
Sbjct: 174 WTFHGE 179
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 WIWHGE 8
W +HGE
Sbjct: 174 WTFHGE 179
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 WIWHGE 8
W +HGE
Sbjct: 174 WTFHGE 179
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 2 DWIW 5
DW+W
Sbjct: 372 DWLW 375
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 2 DWIW 5
DW+W
Sbjct: 375 DWLW 378
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 3 WIWHGEN 9
W W G N
Sbjct: 556 WDWSGHN 562
>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 WIWHGEN 9
W W GE+
Sbjct: 281 WRWDGES 287
>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 WIWHGEN 9
W W GE+
Sbjct: 281 WRWDGES 287
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 3 WIWHG 7
WIW G
Sbjct: 585 WIWGG 589
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 2 DWIWHGE 8
D +W+GE
Sbjct: 119 DRLWYGE 125
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 2 DWIWHGEN 9
DW+W +N
Sbjct: 416 DWLWESQN 423
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 3 WIWHG 7
WIW G
Sbjct: 585 WIWGG 589
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 3 WIWHG 7
WIW G
Sbjct: 585 WIWGG 589
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 3 WIWHG 7
WIW G
Sbjct: 585 WIWGG 589
>sp|VE2_HPV09|REGULATORY protein E2|Human papillomavirus 9
Query: 3 WIWHGEN 9
W W GE+
Sbjct: 412 WSWVGED 418
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 4 IWHGE 8
+WHGE
Sbjct: 2278 MWHGE 2282
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 IWHG 7
IWHG
Sbjct: 2057 IWHG 2060
Query: 1 QDWIW 5
Q W+W
Sbjct: 765 QGWVW 769
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 5 WHGEN 9
W GEN
Sbjct: 207 WRGEN 211
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 DWIW 5
DW+W
Sbjct: 2905 DWLW 2908
>sp|VP7_ROTWI|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 3 WIWHGENC 10
WI G++C
Sbjct: 184 WIAMGQSC 191
>sp|VP7_ROTHB|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 QDWIWHGENC 10
+ WI G++C
Sbjct: 182 KQWISMGDSC 191
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 DWIW 5
DW+W
Sbjct: 2901 DWLW 2904
>sp|VP7_ROTH7|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 3 WIWHGENC 10
WI G++C
Sbjct: 184 WIAMGQSC 191
>sp|VP7_ROTHQ|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 3 WIWHGENC 10
WI G++C
Sbjct: 184 WIAMGQSC 191
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 4 IWHGE 8
+WH E
Sbjct: 326 VWHAE 330
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 6 HGENC 10
HGE+C
Sbjct: 1047 HGEDC 1051
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 6 HGENC 10
HGE+C
Sbjct: 1046 HGEDC 1050
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 6 HGENC 10
HGE+C
Sbjct: 1047 HGEDC 1051
>sp|VP7_ROTHU|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 3 WIWHGENC 10
WI G++C
Sbjct: 184 WISMGQSC 191
>sp|VE2_HPV17|REGULATORY protein E2|Human papillomavirus 17
Query: 3 WIWHGEN 9
W W G N
Sbjct: 403 WSWVGAN 409
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 2 DWIW 5
+WIW
Sbjct: 384 EWIW 387
>sp|VP7_ROTH9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 3 WIWHGENC 10
WI G++C
Sbjct: 184 WISMGDSC 191
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 2 DWIWHG 7
DW W G
Sbjct: 567 DWKWGG 572
>sp|VP7_ROTHL|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 3 WIWHGENC 10
WI G++C
Sbjct: 184 WISMGDSC 191
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 QDWIWHG 7
++W W G
Sbjct: 2051 RNWTWEG 2057
>sp|UL135_HCMVT|PROTEIN UL135|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 WIW 5
WIW
Sbjct: 3 WIW 5
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 DWIWHGENC 10
DW H + C
Sbjct: 126 DWEHHIQQC 134
>sp|FUS_MUMPZ|FUSION glycoprotein F0|Mumps virus genotype N (strain
Query: 1 QDWIWHGENC 10
+ W + +NC
Sbjct: 315 EQWSYPAKNC 324
>sp|FUS_MUMPR|FUSION glycoprotein F0|Mumps virus (strain RW) (MuV)
Query: 1 QDWIWHGENC 10
+ W + +NC
Sbjct: 315 EQWSYPAKNC 324
>sp|FUS_MUMPM|FUSION glycoprotein F0|Mumps virus genotype B (strain
Query: 1 QDWIWHGENC 10
+ W + +NC
Sbjct: 315 EQWSYPAKNC 324
>sp|VP7_ROTH6|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 3 WIWHGENC 10
WI G++C
Sbjct: 184 WISMGDSC 191
31|Sequence|151|160|HGENCYLFSS
>sp|VL2_HPV26|MINOR capsid protein L2|Human papillomavirus type 26
Query: 1 HGENCYLF 8
HG+N YL+
Sbjct: 441 HGDNYYLW 448
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 2 GENCYLFS 9
GEN Y F+
Sbjct: 335 GENKYFFT 342
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 GENCYLFSS 10
G + YLF+S
Sbjct: 392 GRSAYLFTS 400
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 GENCYLFSS 10
G NCY +S
Sbjct: 53 GPNCYATTS 61
>sp|PG049_VACCC|PROTEIN OPG049|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 NCYLFS 9
+CYLFS
Sbjct: 213 SCYLFS 218
>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)
Query: 4 NCYLFS 9
+CYLFS
Sbjct: 213 SCYLFS 218
>sp|PG162_VAR67|PROTEIN OPG162|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 GENCYLFSS 10
E CY++ S
Sbjct: 138 AEACYIYKS 146
>sp|PG049_MONPV|PROTEIN OPG049|Monkeypox virus (MPXV)
Query: 4 NCYLFS 9
+CYLFS
Sbjct: 212 SCYLFS 217
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 4 NCYLFSS 10
NC L+SS
Sbjct: 1022 NCLLYSS 1028
>sp|PG162_VACCC|PROTEIN OPG162|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GENCYLFSS 10
E CY++ S
Sbjct: 138 AEACYIYKS 146
>sp|PG162_MONPV|PROTEIN OPG162|Monkeypox virus (MPXV)
Query: 3 ENCYLFSS 10
E CY++ S
Sbjct: 139 EACYIYKS 146
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 2 GENCY 6
ENCY
Sbjct: 105 AENCY 109
>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)
Query: 2 GENCY 6
ENCY
Sbjct: 106 AENCY 110
>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain
Query: 2 GENCY 6
ENCY
Sbjct: 106 AENCY 110
>sp|VSGP_TAFVC|PRE-SMALL/SECRETED glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 2 GENCY 6
ENCY
Sbjct: 105 AENCY 109
>sp|VSGP_EBOZM|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 GENCY 6
ENCY
Sbjct: 105 AENCY 109
>sp|VSGP_EBOZ5|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 GENCY 6
ENCY
Sbjct: 105 AENCY 109
>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 2 GENCY 6
ENCY
Sbjct: 106 AENCY 110
>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 GENCY 6
ENCY
Sbjct: 106 AENCY 110
>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 GENCY 6
ENCY
Sbjct: 106 AENCY 110
>sp|VSGP_EBOG4|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 GENCY 6
ENCY
Sbjct: 105 AENCY 109
>sp|VSGP_EBOEC|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 2 GENCY 6
ENCY
Sbjct: 105 AENCY 109
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 2 GENCY 6
ENCY
Sbjct: 105 AENCY 109
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 GENCY 6
ENCY
Sbjct: 105 AENCY 109
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 GENCY 6
ENCY
Sbjct: 105 AENCY 109
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 GENCY 6
ENCY
Sbjct: 105 AENCY 109
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 GENCY 6
ENCY
Sbjct: 105 AENCY 109
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 GENCY 6
ENCY
Sbjct: 105 AENCY 109
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 2 GENCY 6
ENCY
Sbjct: 106 AENCY 110
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 GENCY 6
ENCY
Sbjct: 106 AENCY 110
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 GENCY 6
ENCY
Sbjct: 106 AENCY 110
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 GENCY 6
ENCY
Sbjct: 105 AENCY 109
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 2 GENCY 6
ENCY
Sbjct: 105 AENCY 109
>sp|VSSGP_EBOZM|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Mayinga-76)
Query: 2 GENCY 6
ENCY
Sbjct: 105 AENCY 109
>sp|VSSGP_EBOZ5|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Kikwit-95)
Query: 2 GENCY 6
ENCY
Sbjct: 105 AENCY 109
>sp|VE2_HPV61|REGULATORY protein E2|Human papillomavirus type 61
Query: 2 GENCYLFSS 10
G+NC +SS
Sbjct: 292 GDNCDSYSS 300
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 ENCYLFS 9
E CY FS
Sbjct: 129 EPCYWFS 135
>sp|PG049_VAR67|PROTEIN OPG049|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 CYLFS 9
CYLFS
Sbjct: 213 CYLFS 217
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 4 NCYLF 8
NCY F
Sbjct: 204 NCYAF 208
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 GENCY 6
ENCY
Sbjct: 105 AENCY 109
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 GENCY 6
ENCY
Sbjct: 105 AENCY 109
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 GENCY 6
ENCY
Sbjct: 105 AENCY 109
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 HGENCY 6
H E CY
Sbjct: 1933 HEEKCY 1938
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 HGENCY 6
H E CY
Sbjct: 1933 HEEKCY 1938
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 HGENCY 6
H E CY
Sbjct: 1934 HEEKCY 1939
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 HGENCY 6
H E CY
Sbjct: 1894 HEEKCY 1899
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 GENCYLFSS 10
G+N +FSS
Sbjct: 313 GDNVCIFSS 321
32|Sequence|156|165|YLFSSGSFNW
>sp|VE8E2_HPV04|PROTEIN E8^E2C|Human papillomavirus 4
Query: 1 YLFSSGSFNW 10
+LF S +NW
Sbjct: 157 FLFMSTVWNW 166
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 LFSSGSFN 9
LFSS FN
Sbjct: 1960 LFSSEEFN 1967
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 LFSSGS 7
LFSSGS
Sbjct: 402 LFSSGS 407
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 LFSSGS 7
LFSSGS
Sbjct: 402 LFSSGS 407
>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65
Query: 1 YLFSSGSFNW 10
+LF S +NW
Sbjct: 349 FLFMSTVWNW 358
>sp|VE2_HPV04|REGULATORY protein E2|Human papillomavirus 4
Query: 1 YLFSSGSFNW 10
+LF S +NW
Sbjct: 349 FLFMSTVWNW 358
33|Sequence|161|170|GSFNWEKSQE
>sp|U17_HHV6Z|PROTEIN U17|Human herpesvirus 6B (strain Z29)
Query: 3 FNWEKSQ 9
FNW KS+
Sbjct: 47 FNWPKSR 53
>sp|U17_HHV6U|PROTEIN U17|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 FNWEKSQ 9
FNW KS+
Sbjct: 47 FNWPKSR 53
>sp|U17_HHV6G|PROTEIN U17|Human herpesvirus 6A (strain GS)
Query: 3 FNWEKSQ 9
FNW KS+
Sbjct: 47 FNWPKSR 53
>sp|U16_HHV6U|PROTEIN U17/U16|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 FNWEKSQ 9
FNW KS+
Sbjct: 47 FNWPKSR 53
>sp|U16_HHV6G|PROTEIN U17/U16|Human herpesvirus 6A (strain GS)
Query: 3 FNWEKSQ 9
FNW KS+
Sbjct: 47 FNWPKSR 53
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 GSFNWEK 7
G F+WE+
Sbjct: 935 GRFHWER 941
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 GSFNWEK 7
G F+WE+
Sbjct: 928 GRFHWER 934
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 GSFNWEK 7
G F+WE+
Sbjct: 933 GRFHWER 939
>sp|TRX2_HHV6Z|TRIPLEX capsid protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 GSFNWEK 7
G F WEK
Sbjct: 94 GPFPWEK 100
>sp|TRX2_HHV6U|TRIPLEX capsid protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GSFNWEK 7
G F WEK
Sbjct: 94 GPFPWEK 100
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 2 SFNWE 6
SFNWE
Sbjct: 194 SFNWE 198
>sp|PAP1_YLDV|POLY(A) polymerase catalytic subunit|Yaba-like disease virus (YLDV)
Query: 1 GSFNWEK 7
SFN+EK
Sbjct: 325 ASFNYEK 331
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 2 SFNWEK 7
SFN+EK
Sbjct: 60 SFNYEK 65
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 WEKSQ 9
WE+SQ
Sbjct: 53 WERSQ 57
>sp|CAP6_ADE12|PRE-PROTEIN VI|Human adenovirus A serotype 12
Query: 1 GSFNW 5
G+FNW
Sbjct: 33 GAFNW 37
>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 2 SFNWEKS 8
SF+W K+
Sbjct: 253 SFDWNKA 259
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 4 NWEKSQE 10
+W K+QE
Sbjct: 212 SWTKTQE 218
34|Sequence|166|175|EKSQEKCLSL
>sp|PAX_I33A0|PROTEIN PA-X|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 KSQEKCLSL 10
KSQE+C SL
Sbjct: 206 KSQEQCASL 214
>sp|PAX_I34A1|PROTEIN PA-X|Influenza A virus (strain A/Puerto
Query: 2 KSQEKCLSL 10
KSQE+C SL
Sbjct: 206 KSQEQCASL 214
>sp|PAX_I06A0|PROTEIN PA-X|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 KSQEKCLSL 10
KSQE+C SL
Sbjct: 206 KSQEQCASL 214
>sp|PAX_I000X|PROTEIN PA-X|Influenza A virus (strain A/X-31
Query: 2 KSQEKCLSL 10
KSQE+C SL
Sbjct: 206 KSQEQCASL 214
>sp|PAX_I35A3|PROTEIN PA-X|Influenza A virus (strain A/USA:Phila/1935
Query: 2 KSQEKCLSL 10
KSQE+C SL
Sbjct: 206 KSQEQCASL 214
>sp|PAX_I36A0|PROTEIN PA-X|Influenza A virus (strain A/Henry/1936
Query: 2 KSQEKCLSL 10
KSQE+C SL
Sbjct: 206 KSQEQCASL 214
>sp|PAX_I43A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 KSQEKCLS 9
KSQE+C S
Sbjct: 206 KSQEQCAS 213
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 KSQEKCLS 9
+S+EKC S
Sbjct: 1614 RSEEKCSS 1621
>sp|PRO_ADE17|PROTEASE adenovirus D serotype 17
Query: 3 SQEKCLSL 10
S ++CLSL
Sbjct: 101 SPDRCLSL 108
>sp|PRO_ADE09|PROTEASE adenovirus D serotype 9
Query: 3 SQEKCLSL 10
S ++CLSL
Sbjct: 101 SPDRCLSL 108
>sp|PAX_I59A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 KSQEKCLSL 10
KSQE C+ L
Sbjct: 206 KSQEPCVGL 214
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 4 QEKCLSL 10
+EKCL L
Sbjct: 1640 EEKCLVL 1646
>sp|PAX_I71A1|PROTEIN PA-X|Influenza A virus (strain A/Memphis/1/1971
Query: 2 KSQEKCLSL 10
KSQE+C L
Sbjct: 206 KSQEQCAGL 214
>sp|PAX_I70A0|PROTEIN PA-X|Influenza A virus (strain A/Qu/7/1970
Query: 2 KSQEKCLSL 10
KSQE+C L
Sbjct: 206 KSQEQCAGL 214
>sp|PAX_I69A0|PROTEIN PA-X|Influenza A virus (strain A/England/878/1969
Query: 2 KSQEKCLSL 10
KSQE+C L
Sbjct: 206 KSQEQCAGL 214
>sp|PAX_I40A0|PROTEIN PA-X|Influenza A virus (strain A/Hickox/1940
Query: 2 KSQEKCLS 9
KSQE+C S
Sbjct: 206 KSQEQCAS 213
>sp|PAX_I18A0|PROTEIN PA-X|Influenza A virus (strain A/Brevig
Query: 2 KSQEKCLSL 10
KSQE+C L
Sbjct: 206 KSQEQCAGL 214
>sp|PAX_I45A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 KSQEKCLS 9
KSQE+C S
Sbjct: 206 KSQEQCAS 213
35|Sequence|171|180|KCLSLDAKLL
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 1 KCLSLDAK 8
+CLS+DAK
Sbjct: 175 ECLSMDAK 182
>sp|W_NIPAV|PROTEIN W|Nipah virus
Query: 2 CLSLDAKLL 10
CL DAK+L
Sbjct: 149 CLVSDAKML 157
>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus
Query: 2 CLSLDAKLL 10
CL DAK+L
Sbjct: 149 CLVSDAKML 157
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 2 CLSLDAKLL 10
CL DAK+L
Sbjct: 149 CLVSDAKML 157
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 1 KCLSLDAKL 9
KC L+AKL
Sbjct: 200 KCKDLNAKL 208
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 1 KCLSLDAK 8
+CLS+D K
Sbjct: 172 ECLSMDYK 179
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 1 KCLSLDAK 8
+CLS+D K
Sbjct: 174 ECLSMDYK 181
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 1 KCLSLDAK 8
+CLS+D K
Sbjct: 146 ECLSMDYK 153
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 1 KCLSLDAKL 9
KC L+AKL
Sbjct: 199 KCKDLNAKL 207
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 KCLSLD 6
KCL+LD
Sbjct: 1306 KCLNLD 1311
>sp|EAD_EBVG|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 2 CLSLDAKLL 10
CL+LD K L
Sbjct: 206 CLTLDYKPL 214
>sp|EAD_EBVB9|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 2 CLSLDAKLL 10
CL+LD K L
Sbjct: 206 CLTLDYKPL 214
>sp|EAD_EBVA8|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 2 CLSLDAKLL 10
CL+LD K L
Sbjct: 206 CLTLDYKPL 214
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 1 KCLSLDAK 8
+C+S+D K
Sbjct: 145 ECISMDYK 152
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 1 KCLSLDAK 8
+C+S+D K
Sbjct: 146 ECISMDYK 153
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 KCLSLDAK 8
+C+S+D K
Sbjct: 145 ECISMDYK 152
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 KCLSLDA 7
KC+ LDA
Sbjct: 1195 KCVILDA 1201
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 KCLSLDA 7
KC+ LDA
Sbjct: 1195 KCVILDA 1201
36|Sequence|176|185|DAKLLKINST
>sp|VPAP_HHV6U|DNA polymerase processivity factor|Human herpesvirus 6A (strain
Query: 2 AKLLKINST 10
AKLLK N+T
Sbjct: 70 AKLLKENTT 78
>sp|VPAP_HHV6G|DNA polymerase processivity factor|Human herpesvirus 6A (strain GS)
Query: 2 AKLLKINST 10
AKLLK N+T
Sbjct: 65 AKLLKENAT 73
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 KLLKINS 9
KLLK+NS
Sbjct: 1680 KLLKLNS 1686
>sp|VPAP_HHV7J|DNA polymerase processivity factor|Human herpesvirus 7 (strain JI)
Query: 2 AKLLKINST 10
AKLL+ N+T
Sbjct: 44 AKLLRENTT 52
37|Sequence|181|190|KINSTADLDF
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 INSTADLD 9
INSTADLD
Sbjct: 546 INSTADLD 553
>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P
Query: 1 KINSTADLD 9
++NST D D
Sbjct: 136 QVNSTEDAD 144
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 NSTADLD 9
NS++DLD
Sbjct: 609 NSSSDLD 615
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 NSTADLD 9
NS++DLD
Sbjct: 609 NSSSDLD 615
>sp|TEG7_HHV7J|TEGUMENT protein UL51 homolog|Human herpesvirus 7 (strain JI)
Query: 1 KINSTADLD 9
KIN+ DLD
Sbjct: 146 KINTLIDLD 154
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 4 STADLDF 10
+T+DLDF
Sbjct: 1715 NTSDLDF 1721
>sp|VP7_ROTHU|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 KINSTADLD 9
K NST +LD
Sbjct: 143 KYNSTLELD 151
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 3 NSTADLD 9
N+T DLD
Sbjct: 329 NTTVDLD 335
38|Sequence|186|195|ADLDFIQQAI
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 LDFIQQA 9
LDFIQQ
Sbjct: 4260 LDFIQQG 4266
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 LDFIQQA 9
LDFIQQ
Sbjct: 4260 LDFIQQG 4266
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 3 LDFIQQAI 10
LD+IQ+ I
Sbjct: 11 LDYIQEQI 18
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 LDFIQQA 9
LD+IQQ
Sbjct: 4298 LDYIQQG 4304
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 LDFIQQA 9
LD+IQQ
Sbjct: 4318 LDYIQQG 4324
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 LDFIQQA 9
LD+IQQ
Sbjct: 4348 LDYIQQG 4354
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 LDFIQQA 9
LD+IQQ
Sbjct: 4298 LDYIQQG 4304
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 LDFIQQA 9
LD+IQQ
Sbjct: 4318 LDYIQQG 4324
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 LDFIQQA 9
LD+IQQ
Sbjct: 4348 LDYIQQG 4354
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 2 DLDFIQQAI 10
D+D + QAI
Sbjct: 354 DIDHLTQAI 362
39|Sequence|191|200|IQQAISYSSF
>sp|TAX_HTLV2|PROTEIN Tax-2|Human T-cell leukemia virus 2
Query: 2 QQAISYSSF 10
Q I YSSF
Sbjct: 294 HQLIQYSSF 302
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 3 QAISYSSF 10
QA++YS F
Sbjct: 370 QAVTYSDF 377
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 QAISYSSF 10
QA++YS F
Sbjct: 370 QAVTYSDF 377
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 QQAISYS 8
+QA+SYS
Sbjct: 1323 RQALSYS 1329
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 3 QAISYSSF 10
Q +SYS+F
Sbjct: 34 QYVSYSNF 41
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 QAISYSSF 10
Q +SYS+F
Sbjct: 34 QYVSYSNF 41
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 3 QAISYSSF 10
Q +SYS+F
Sbjct: 34 QYVSYSNF 41
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 3 QAISYSSF 10
Q +SYS+F
Sbjct: 34 QYVSYSNF 41
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 3 QAISYSSF 10
Q +SYS+F
Sbjct: 34 QYVSYSNF 41
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 QAISYSSF 10
Q +SYS+F
Sbjct: 26 QYVSYSNF 33
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 3 QAISYSSF 10
Q +SYS+F
Sbjct: 34 QYVSYSNF 41
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 3 QAISYSSF 10
Q +SYS+F
Sbjct: 34 QYVSYSNF 41
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 3 QAISYSSF 10
Q +SYS+F
Sbjct: 34 QYVSYSNF 41
40|Sequence|196|205|SYSSFPFWMG
>sp|PG132_VARV|VIRION morphogenesis protein OPG132|Variola virus
Query: 1 SYSSFPFW 8
SY SF FW
Sbjct: 70 SYQSFSFW 77
>sp|PG132_VAR67|VIRION morphogenesis protein OPG132|Variola virus (isolate
Query: 1 SYSSFPFW 8
SY SF FW
Sbjct: 70 SYQSFSFW 77
>sp|PG132_VACCC|VIRION morphogenesis protein OPG132|Vaccinia virus (strain Copenhagen)
Query: 1 SYSSFPFW 8
SY SF FW
Sbjct: 70 SYQSFSFW 77
>sp|PG132_MONPV|VIRION morphogenesis protein OPG132|Monkeypox virus (MPXV)
Query: 1 SYSSFPFW 8
SY SF FW
Sbjct: 70 SYQSFSFW 77
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 YSSFPFWMG 10
++SFP W+G
Sbjct: 548 HASFPCWLG 556
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 YSSFPFW 8
+ +FPFW
Sbjct: 353 HENFPFW 359
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 YSSFPFW 8
+ +FPFW
Sbjct: 353 HENFPFW 359
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 2 YSSFPFW 8
YS F FW
Sbjct: 435 YSKFNFW 441
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 SYSSFPFWMG 10
Y PFW G
Sbjct: 627 DYYEVPFWAG 636
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 1 SYSSFPFWMG 10
+Y S+P W+
Sbjct: 286 TYGSYPDWIA 295
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 1 SYSSFPFWMG 10
+Y S+P W+
Sbjct: 285 TYGSYPDWIA 294
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 757 YTSFPWLLG 765
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 757 YTSFPWLLG 765
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 756 YTSFPWLLG 764
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 757 YTSFPWLLG 765
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 757 YTSFPWLLG 765
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 757 YTSFPWLLG 765
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 757 YTSFPWLLG 765
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 1 SYSSFPFWMG 10
Y+SFP+ +G
Sbjct: 745 KYTSFPWLLG 754
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 1 SYSSFPFWMG 10
Y+SFP+ +G
Sbjct: 756 KYTSFPWLLG 765
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 757 YTSFPWLLG 765
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 1 SYSSFPFWMG 10
Y+SFP+ +G
Sbjct: 756 KYTSFPWLLG 765
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 SYSSFPFWMG 10
Y+SFP+ +G
Sbjct: 756 KYTSFPWLLG 765
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 759 YTSFPWLLG 767
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 757 YTSFPWLLG 765
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 1 SYSSFPFWMG 10
Y+SFP+ +G
Sbjct: 745 KYTSFPWLLG 754
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 757 YTSFPWLLG 765
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 757 YTSFPWLLG 765
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 757 YTSFPWLLG 765
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 757 YTSFPWLLG 765
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 759 YTSFPWLLG 767
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 759 YTSFPWLLG 767
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 759 YTSFPWLLG 767
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 757 YTSFPWLLG 765
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 757 YTSFPWLLG 765
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 757 YTSFPWLLG 765
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 757 YTSFPWLLG 765
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 757 YTSFPWLLG 765
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 1 SYSSFPFWMG 10
Y+SFP+ +G
Sbjct: 756 KYTSFPWLLG 765
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 759 YTSFPWLLG 767
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 752 YTSFPWLLG 760
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 756 YTSFPWLLG 764
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 746 YTSFPWLLG 754
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 752 YTSFPWLLG 760
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 SYSSFPFWMG 10
Y+SFP+ +G
Sbjct: 756 KYTSFPWLLG 765
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 752 YTSFPWLLG 760
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 759 YTSFPWLLG 767
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 1 SYSSFPFWMG 10
Y+SFP+ +G
Sbjct: 755 KYTSFPWLLG 764
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 756 YTSFPWLLG 764
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 1 SYSSFPFWMG 10
Y+SFP+ +G
Sbjct: 745 KYTSFPWLLG 754
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 1 SYSSFPFWMG 10
Y+SFP+ +G
Sbjct: 745 KYTSFPWLLG 754
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 2 YSSFPFWMG 10
Y FP W+
Sbjct: 291 YGPFPDWLA 299
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 756 YTSFPWLLG 764
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 756 YTSFPWLLG 764
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 756 YTSFPWLLG 764
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 YSSFPFWMG 10
Y+SFP+ +G
Sbjct: 757 YTSFPWLLG 765
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 1 SYSSFPFWMG 10
Y+SFP+ +G
Sbjct: 745 KYTSFPWLLG 754
>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human
Query: 2 YSSFPFW 8
YS + FW
Sbjct: 448 YSQYKFW 454
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 3 SSFPFWMG 10
+S+P W G
Sbjct: 89 ASYPRWSG 96
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 SSFPFWM 9
SS P W+
Sbjct: 1596 SSLPVWL 1602
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 1 SYSSFPFWMG 10
SY +P W+
Sbjct: 286 SYGPYPDWIA 295
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 SSFPFWM 9
SS P W+
Sbjct: 1596 SSLPVWL 1602
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 SSFPFWM 9
SS P W+
Sbjct: 1596 SSLPVWL 1602
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 SSFPFWM 9
SS P W+
Sbjct: 1596 SSLPVWL 1602
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 YSSFPFW 8
YS P W
Sbjct: 40 YSGVPVW 46
41|Sequence|201|210|PFWMGLSRRN
>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB
Query: 3 WMGLSRRN 10
W+GL+ RN
Sbjct: 466 WLGLNTRN 473
>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi
Query: 3 WMGLSRRN 10
W+GL+ RN
Sbjct: 466 WLGLNTRN 473
>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)
Query: 3 WMGLSRRN 10
W+GL+ RN
Sbjct: 466 WLGLNTRN 473
>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep
Query: 3 WMGLSRRN 10
W+GL+ RN
Sbjct: 466 WLGLNTRN 473
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 3 WMGLSRRN 10
W+GL+ RN
Sbjct: 746 WLGLNMRN 753
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 3 WMGLSRRN 10
WMG+ RR+
Sbjct: 488 WMGVFRRS 495
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 3 WMGLSRRN 10
WMG+ RR+
Sbjct: 488 WMGVFRRS 495
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 3 WMGLSRRN 10
WMG+ RR+
Sbjct: 488 WMGVFRRS 495
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 WMGLSRRN 10
W+GL+ RN
Sbjct: 733 WLGLNSRN 740
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 WMGLSRRN 10
W+GL+ RN
Sbjct: 747 WLGLNSRN 754
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 WMGLSRRN 10
W+GL+ RN
Sbjct: 747 WLGLNSRN 754
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 WMGLSRRN 10
W+GL+ RN
Sbjct: 746 WLGLNTRN 753
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 WMGLSRRN 10
W+GL+ RN
Sbjct: 746 WLGLNMRN 753
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 WMGLSRRN 10
W+GL+ RN
Sbjct: 746 WLGLNTRN 753
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 WMGLSRRN 10
W+GL+ RN
Sbjct: 746 WLGLNMRN 753
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 WMGLSRRN 10
W+GL+ RN
Sbjct: 746 WLGLNMRN 753
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 WMGLSRRN 10
W+GL+ RN
Sbjct: 746 WLGLNMRN 753
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 WMGLSRRN 10
W+GL+ RN
Sbjct: 746 WLGLNMRN 753
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 WMGLSRRN 10
W+GL+ RN
Sbjct: 745 WLGLNARN 752
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 FWMGLSRRN 10
WMGL+ R+
Sbjct: 757 LWMGLNARD 765
>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])
Query: 4 MGLSRRN 10
MG+SRR+
Sbjct: 567 MGISRRS 573
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 4 MGLSRRN 10
MG+SRR+
Sbjct: 567 MGISRRS 573
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 4 MGLSRRN 10
MG+SRR+
Sbjct: 567 MGISRRS 573
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 4 MGLSRRN 10
MG+SRR+
Sbjct: 567 MGISRRS 573
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
Query: 4 MGLSRRN 10
MG+SRR+
Sbjct: 567 MGISRRS 573
>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])
Query: 4 MGLSRRN 10
MG+SRR+
Sbjct: 567 MGVSRRS 573
>sp|VP1_POVJC|MAJOR capsid protein VP1|JC polyomavirus (JCPyV) (JCV)
Query: 3 WMGLSR 8
W GLSR
Sbjct: 272 WRGLSR 277
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 WMGLSRRN 10
W+GL+ +N
Sbjct: 760 WLGLNTKN 767
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 WMGLSRRN 10
W+GL+ R+
Sbjct: 745 WLGLNSRS 752
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 WMGLSRRN 10
W+GL+ +N
Sbjct: 764 WLGLNTKN 771
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 WMGLSRRN 10
W+GL+ +N
Sbjct: 764 WLGLNTKN 771
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 WMGLSRRN 10
W+GL+ R+
Sbjct: 745 WLGLNSRS 752
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 5 GLSRRN 10
GLS+RN
Sbjct: 124 GLSKRN 129
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 5 GLSRRN 10
GLS+RN
Sbjct: 124 GLSKRN 129
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 5 GLSRRN 10
GLS+RN
Sbjct: 124 GLSKRN 129
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 5 GLSRRN 10
GLS+RN
Sbjct: 124 GLSKRN 129
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 WMGLSRRN 10
W+GL+ R+
Sbjct: 740 WLGLNSRS 747
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 FWMGLSRR 9
W+G+S R
Sbjct: 755 LWLGISAR 762
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 FWMGLSRR 9
W+G+S R
Sbjct: 755 LWLGVSSR 762
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 WMGLSRRN 10
W+GL+ R+
Sbjct: 744 WLGLNSRS 751
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 WMGLSRRN 10
W+GL+ R+
Sbjct: 745 WLGLNSRS 752
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 WMGLSRRN 10
W+GL+ R+
Sbjct: 745 WLGLNSRS 752
>sp|YVBI_VACCC|UNCHARACTERIZED 7.6 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 FWMGL 6
+WMGL
Sbjct: 8 YWMGL 12
42|Sequence|206|215|LSRRNPSYPW
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 753 LSRKYTSFPW 762
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 753 LSRKYTSFPW 762
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 753 LSRKYTSFPW 762
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 753 LSRKYTSFPW 762
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 753 LSRKYTSFPW 762
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 753 LSRKYTSFPW 762
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 753 LSRKYTSFPW 762
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 753 LSRKYTSFPW 762
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 753 LSRKYTSFPW 762
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 753 LSRKYTSFPW 762
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 753 LSRKYTSFPW 762
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 753 LSRKYTSFPW 762
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 752 LSRKYTSFPW 761
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 753 LSRKYTSFPW 762
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 753 LSRKYTSFPW 762
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 755 LSRKYTSFPW 764
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 753 LSRKYTSFPW 762
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 753 LSRKYTSFPW 762
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 755 LSRKYTSFPW 764
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 755 LSRKYTSFPW 764
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 742 LSRKYTSFPW 751
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 748 LSRKYTSFPW 757
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 752 LSRKYTSFPW 761
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 748 LSRKYTSFPW 757
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 755 LSRKYTSFPW 764
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 748 LSRKYTSFPW 757
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 752 LSRKYTSFPW 761
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 753 LSRKYTSFPW 762
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 752 LSRKYTSFPW 761
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 752 LSRKYTSFPW 761
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 742 LSRKYTSFPW 751
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 753 LSRKYTSFPW 762
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 755 LSRKYTSFPW 764
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 742 LSRKYTSFPW 751
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 742 LSRKYTSFPW 751
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 752 LSRKYTSFPW 761
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 753 LSRKYTSFPW 762
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 753 LSRKYTSFPW 762
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 753 LSRKYTSFPW 762
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 742 LSRKYTSFPW 751
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 753 LSRKYTSFPW 762
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 752 LSRKYTSFPW 761
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LSRRNPSYPW 10
LSR+ S+PW
Sbjct: 742 LSRKYTSFPW 751
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 RRNPSYPW 10
R NP+Y W
Sbjct: 523 RGNPTYTW 530
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 RRNPSYPW 10
R NP+Y W
Sbjct: 522 RGNPTYTW 529
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 RRNPSYPW 10
R NP+Y W
Sbjct: 522 RGNPTYTW 529
>sp|M21_HRSV|PROTEIN M2-1|Human respiratory syncytial virus
Query: 1 LSRRNP 6
+SRRNP
Sbjct: 1 MSRRNP 6
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 4 RNPSYPW 10
R P+ PW
Sbjct: 1256 RGPTKPW 1262
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 4 RNPSYPW 10
R P+ PW
Sbjct: 1256 RGPTKPW 1262
>sp|M21_HRSVA|PROTEIN M2-1|Human respiratory syncytial virus A
Query: 1 LSRRNP 6
+SRRNP
Sbjct: 1 MSRRNP 6
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 4 RNPSYPW 10
R P+ PW
Sbjct: 1256 RGPTKPW 1262
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 1 LSRRNPSYPW 10
+SRR P W
Sbjct: 120 MSRRRPETVW 129
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 1 LSRRNPSY 8
L RRNP++
Sbjct: 505 LERRNPTF 512
>sp|M21_HRSVB|PROTEIN M2-1|Human respiratory syncytial virus B
Query: 1 LSRRNP 6
+SRRNP
Sbjct: 1 MSRRNP 6
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 LSRRNPSYPW 10
LSR+ ++PW
Sbjct: 753 LSRKYTAFPW 762
>sp|NSP4_ROTHV|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate
Query: 2 SRRNPSYP 9
SR+NP P
Sbjct: 161 SRKNPYEP 168
>sp|NSP4_ROTHT|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 2 SRRNPSYP 9
SR+NP P
Sbjct: 161 SRKNPYEP 168
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 RRNPSYPW 10
+R P PW
Sbjct: 1180 QRGPKSPW 1187
>sp|FUS_MUMPZ|FUSION glycoprotein F0|Mumps virus genotype N (strain
Query: 4 RNPSYP 9
++PSYP
Sbjct: 388 KSPSYP 393
>sp|FUS_MUMPS|FUSION glycoprotein F0|Mumps virus (strain SBL) (MuV)
Query: 4 RNPSYP 9
++PSYP
Sbjct: 388 KSPSYP 393
>sp|FUS_MUMPR|FUSION glycoprotein F0|Mumps virus (strain RW) (MuV)
Query: 4 RNPSYP 9
++PSYP
Sbjct: 388 KSPSYP 393
>sp|FUS_MUMPM|FUSION glycoprotein F0|Mumps virus genotype B (strain
Query: 4 RNPSYP 9
++PSYP
Sbjct: 388 KSPSYP 393
>sp|FUS_MUMPK|FUSION glycoprotein F0|Mumps virus (strain Kilham) (MuV)
Query: 4 RNPSYP 9
++PSYP
Sbjct: 388 KSPSYP 393
>sp|FUS_MUMP1|FUSION glycoprotein F0|Mumps virus (strain SBL-1) (MuV)
Query: 4 RNPSYP 9
++PSYP
Sbjct: 388 KSPSYP 393
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 1 LSRRNPSYPW 10
L RR+ +Y W
Sbjct: 176 LQRRDLTYYW 185
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain
Query: 1 LSRRNPSY 8
LS+R P Y
Sbjct: 74 LSKRKPDY 81
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 1 LSRRNPSYPW 10
L RR+ +Y W
Sbjct: 177 LQRRDLTYYW 186
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 1 LSRRNPSY 8
LS+R P Y
Sbjct: 74 LSKRKPDY 81
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 1 LSRRNPSY 8
LS+R P Y
Sbjct: 74 LSKRKPDY 81
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 2 SRRNPS 7
SRRNP+
Sbjct: 581 SRRNPN 586
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 2 SRRNPS 7
SRRNP+
Sbjct: 581 SRRNPN 586
>sp|SPIKE_ADE1H|FIBER protein|Human adenovirus D serotype 15/H9
Query: 5 NPSYPW 10
NP YP+
Sbjct: 12 NPVYPY 17
>sp|SPIKE_ADE09|FIBER protein|Human adenovirus D serotype 9
Query: 5 NPSYPW 10
NP YP+
Sbjct: 12 NPVYPY 17
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 RRNPSYPW 10
+ NP+Y W
Sbjct: 523 KGNPTYSW 530
Query: 3 RRNPSYP 9
RR P++P
Sbjct: 2277 RRGPAFP 2283
>sp|SPIKE_ADE1A|FIBER protein|Human adenovirus B serotype 11
Query: 5 NPSYPW 10
NP YP+
Sbjct: 12 NPVYPY 17
>sp|SPIKE_ADE08|FIBER protein|Human adenovirus D serotype 8
Query: 5 NPSYPW 10
NP YP+
Sbjct: 12 NPVYPY 17
>sp|SPIKE_ADE07|FIBER protein|Human adenovirus B serotype 7
Query: 5 NPSYPW 10
NP YP+
Sbjct: 30 NPVYPY 35
>sp|UL130_HCMVA|UNCHARACTERIZED protein UL130|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SRRNPSYPW 10
+ +NPS PW
Sbjct: 33 ANQNPSPPW 41
>sp|SPIKE_ADE1P|FIBER protein|Human adenovirus B serotype 11
Query: 5 NPSYPW 10
NP YP+
Sbjct: 12 NPVYPY 17
>sp|SPIKE_ADE15|FIBER protein|Human adenovirus D serotype 15
Query: 5 NPSYPW 10
NP YP+
Sbjct: 12 NPVYPY 17
>sp|UL130_HCMVM|ENVELOPE glycoprotein UL130|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SRRNPSYPW 10
+ +NPS PW
Sbjct: 33 ANQNPSPPW 41
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 LSRRNPSY 8
++RR PS+
Sbjct: 1207 IARRTPSF 1214
>sp|SPIKE_ADE02|FIBER protein|Human adenovirus C serotype 2
Query: 5 NPSYPW 10
NP YP+
Sbjct: 12 NPVYPY 17
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 5 NPSYPW 10
NP YP+
Sbjct: 12 NPVYPY 17
>sp|SPIKE_ADE03|FIBER protein|Human adenovirus B serotype 3
Query: 5 NPSYPW 10
NP YP+
Sbjct: 12 NPVYPY 17
43|Sequence|211|220|PSYPWLWEDG
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 PSYPWLWEDG 10
P +PW++ED
Sbjct: 15 PEFPWMFEDA 24
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 PSYPWLWEDG 10
P +PW++ED
Sbjct: 15 PEFPWMFEDA 24
>sp|SPIKE_ADE02|FIBER protein|Human adenovirus C serotype 2
Query: 2 SYPWLWEDG 10
S+ W WE G
Sbjct: 554 SFTWSWESG 562
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 2 SYPWLW 7
SYP LW
Sbjct: 328 SYPLLW 333
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 2 SYPWLW 7
SYP LW
Sbjct: 328 SYPLLW 333
>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)
Query: 2 SYPWLW 7
SYP LW
Sbjct: 328 SYPLLW 333
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 2 SYPWLW 7
SYP LW
Sbjct: 328 SYPLLW 333
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 2 SYPWLW 7
SYP LW
Sbjct: 328 SYPLLW 333
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 2 SYPWLW 7
SYP LW
Sbjct: 328 SYPLLW 333
>sp|NCAP_MEASC|NUCLEOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 2 SYPWLW 7
SYP LW
Sbjct: 328 SYPLLW 333
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 2 SYPWLW 7
SYP LW
Sbjct: 328 SYPLLW 333
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 2 SYPWLW 7
SYP LW
Sbjct: 328 SYPLLW 333
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 2 SYPWLW 7
SYP LW
Sbjct: 328 SYPLLW 333
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 3 YPWLW 7
YP+LW
Sbjct: 378 YPFLW 382
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 2 SYPWLW 7
SYP LW
Sbjct: 328 SYPLLW 333
>sp|VU55_HHV6U|UNCHARACTERIZED protein U55|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 YPWLW 7
YP+LW
Sbjct: 318 YPFLW 322
>sp|V55A_HHV7J|UNCHARACTERIZED protein U55A|Human herpesvirus 7 (strain JI)
Query: 2 SYPWLWE 8
S+P++W+
Sbjct: 312 SFPFIWQ 318
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1
Query: 2 SYPWLWED 9
++PWL D
Sbjct: 296 NFPWLQHD 303
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain
Query: 1 PSYPWLWED 9
P Y +W+D
Sbjct: 79 PDYNAIWQD 87
>sp|ORF24_TTVV6|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 1 PSYPWL 6
P+YPWL
Sbjct: 272 PTYPWL 277
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 5 WLWE 8
WLWE
Sbjct: 417 WLWE 420
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 1 PSYPWLWED 9
P Y +W+D
Sbjct: 79 PDYNAIWQD 87
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 1 PSYPWLWED 9
P Y +W+D
Sbjct: 79 PDYNAIWQD 87
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 YPWLW 7
Y W+W
Sbjct: 2799 YAWIW 2803
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 YPWLW 7
Y W+W
Sbjct: 2799 YAWIW 2803
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PSYPWLWE 8
P Y WL+E
Sbjct: 409 PLYSWLFE 416
>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus
Query: 2 SYPWLWED 9
++PWL D
Sbjct: 296 NFPWLSHD 303
>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 SYPWLWED 9
++PWL D
Sbjct: 296 NFPWLSHD 303
>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)
Query: 2 SYPWLWED 9
++PWL D
Sbjct: 296 NFPWLSHD 303
>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SYPWLWED 9
++PWL D
Sbjct: 296 NFPWLSHD 303
>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)
Query: 2 SYPWLWED 9
++PWL D
Sbjct: 296 NFPWLSHD 303
>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)
Query: 2 SYPWLWED 9
++PWL D
Sbjct: 296 NFPWLSHD 303
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 4 PWLWED 9
PW W D
Sbjct: 2282 PWSWPD 2287
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 PWLWED 9
PW W D
Sbjct: 2282 PWSWPD 2287
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 4 PWLWED 9
PW W D
Sbjct: 2282 PWSWPD 2287
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 PWLWED 9
PW W D
Sbjct: 2282 PWSWPD 2287
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 4 PWLWED 9
PW W D
Sbjct: 2282 PWSWPD 2287
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 SYPWLWED 9
+ PW W D
Sbjct: 2281 TIPWSWPD 2288
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 SYPWLWED 9
+ PW W D
Sbjct: 2281 TIPWSWPD 2288
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 4 PWLWED 9
PW W D
Sbjct: 2282 PWSWPD 2287
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 4 PWLWED 9
PW W D
Sbjct: 2283 PWSWPD 2288
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PSYPW 5
P YPW
Sbjct: 79 PGYPW 83
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PSYPW 5
P YPW
Sbjct: 79 PGYPW 83
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 PSYPW 5
P YPW
Sbjct: 79 PGYPW 83
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PSYPWLWED 9
PSY W D
Sbjct: 193 PSYSTNWAD 201
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PSYPWLWED 9
PSY W D
Sbjct: 193 PSYSTNWAD 201
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PSYPWLWED 9
PSY W D
Sbjct: 193 PSYSTNWAD 201
>sp|NCAP_NIPAV|NUCLEOPROTEIN virus
Query: 3 YPWLW 7
YP LW
Sbjct: 327 YPLLW 331
>sp|NCAP_HENDH|NUCLEOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 YPWLW 7
YP LW
Sbjct: 327 YPLLW 331
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 3 YPWLWE 8
+PW W+
Sbjct: 1258 HPWQWQ 1263
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PSYPWLWED 9
PSY W D
Sbjct: 193 PSYSTNWAD 201
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 1 PSYPW 5
P YPW
Sbjct: 79 PGYPW 83
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 1 PSYPW 5
P YPW
Sbjct: 79 PGYPW 83
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 1 PSYPW 5
P YPW
Sbjct: 79 PGYPW 83
>sp|VE6_HPV49|PROTEIN E6|Human papillomavirus type 49
Query: 6 LWEDG 10
LW+DG
Sbjct: 48 LWKDG 52
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 3 YPWLW 7
YP++W
Sbjct: 891 YPFMW 895
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 2 SYPWLWEDG 10
+YP L +DG
Sbjct: 513 NYPGLLKDG 521
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 2 SYPWLWEDG 10
+YP L +DG
Sbjct: 513 NYPGLLKDG 521
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SYPWLWEDG 10
+YP L +DG
Sbjct: 513 NYPGLLKDG 521
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 SYPWLWEDG 10
+YP L +DG
Sbjct: 513 NYPGLLKDG 521
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 2 SYPWLWEDG 10
+YP L +DG
Sbjct: 513 NYPGLLKDG 521
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 1 PSYPW 5
P YPW
Sbjct: 79 PGYPW 83
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 2 SYPWLW 7
+YP LW
Sbjct: 328 NYPALW 333
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 2 SYPWLW 7
+YP LW
Sbjct: 328 NYPALW 333
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 2 SYPWLW 7
+YP LW
Sbjct: 328 NYPALW 333
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 SYPWLWE 8
++ WLWE
Sbjct: 829 AWGWLWE 835
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 PSYPWLWED 9
PSY W D
Sbjct: 193 PSYSTNWAD 201
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 PSYPWLWED 9
PSY W D
Sbjct: 193 PSYSTNWAD 201
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 PSYPWLWED 9
PSY W D
Sbjct: 193 PSYSTNWAD 201
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 PSYPWLWED 9
PSY W D
Sbjct: 193 PSYSTNWAD 201
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 PSYPWLWED 9
PSY W D
Sbjct: 193 PSYSTNWAD 201
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 1 PSYPW 5
P YPW
Sbjct: 79 PGYPW 83
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 YPWLW 7
YP++W
Sbjct: 893 YPFMW 897
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 3 YPWLW 7
YP++W
Sbjct: 891 YPFMW 895
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 3 YPWLW 7
YP++W
Sbjct: 900 YPFMW 904
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 YPWLW 7
YP++W
Sbjct: 893 YPFMW 897
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 3 YPWLW 7
YP++W
Sbjct: 891 YPFMW 895
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 3 YPWLW 7
YP++W
Sbjct: 894 YPFMW 898
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 YPWLW 7
YP++W
Sbjct: 893 YPFMW 897
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 YPWLW 7
YP++W
Sbjct: 894 YPFMW 898
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 3 YPWLW 7
YP++W
Sbjct: 894 YPFMW 898
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 1 PSYPW 5
P YPW
Sbjct: 79 PGYPW 83
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 1 PSYPWLWED 9
P + W W +
Sbjct: 175 PQFQWAWTN 183
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PSYPWLWED 9
P + W W +
Sbjct: 175 PQFQWAWTN 183
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 1 PSYPWLWED 9
P + W W +
Sbjct: 175 PQFQWAWTN 183
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 5 WLWEDG 10
WL +DG
Sbjct: 568 WLHQDG 573
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 5 WLWEDG 10
WL +DG
Sbjct: 568 WLHQDG 573
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 2 SYPWL 6
S+PWL
Sbjct: 759 SFPWL 763
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 YPWLW 7
YP++W
Sbjct: 886 YPFMW 890
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 3 YPWLW 7
YP++W
Sbjct: 900 YPFMW 904
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 2 SYPWL 6
S+PWL
Sbjct: 759 SFPWL 763
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 YPWLW 7
YP++W
Sbjct: 886 YPFMW 890
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 2 SYPWL 6
S+PWL
Sbjct: 759 SFPWL 763
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 2 SYPWL 6
S+PWL
Sbjct: 759 SFPWL 763
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 2 SYPWL 6
S+PWL
Sbjct: 758 SFPWL 762
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 2 SYPWL 6
S+PWL
Sbjct: 759 SFPWL 763
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 3 YPWLW 7
YP++W
Sbjct: 901 YPFMW 905
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 5 WLWEDG 10
+LW+DG
Sbjct: 359 FLWDDG 364
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 YPWLW 7
YP++W
Sbjct: 886 YPFMW 890
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 2 SYPWL 6
S+PWL
Sbjct: 759 SFPWL 763
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 3 YPWLW 7
YP++W
Sbjct: 882 YPFMW 886
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 YPWLW 7
YP++W
Sbjct: 884 YPFMW 888
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 SYPWL 6
S+PWL
Sbjct: 761 SFPWL 765
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 3 YPWLW 7
YP++W
Sbjct: 885 YPFMW 889
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 SYPWL 6
S+PWL
Sbjct: 759 SFPWL 763
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 SYPWL 6
S+PWL
Sbjct: 761 SFPWL 765
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 3 YPWLW 7
YP++W
Sbjct: 900 YPFMW 904
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 SYPWL 6
S+PWL
Sbjct: 759 SFPWL 763
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 YPWLW 7
YP++W
Sbjct: 897 YPFMW 901
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 3 YPWLW 7
YP++W
Sbjct: 883 YPFMW 887
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 2 SYPWL 6
S+PWL
Sbjct: 748 SFPWL 752
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 2 SYPWL 6
S+PWL
Sbjct: 754 SFPWL 758
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 2 SYPWL 6
S+PWL
Sbjct: 759 SFPWL 763
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 2 SYPWL 6
S+PWL
Sbjct: 758 SFPWL 762
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 3 YPWLW 7
YP++W
Sbjct: 901 YPFMW 905
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 YPWLW 7
YP++W
Sbjct: 898 YPFMW 902
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 YPWLW 7
YP++W
Sbjct: 897 YPFMW 901
44|Sequence|216|225|LWEDGSPLMP
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 LWEDGSPLMP 10
L+E+G PLMP
Sbjct: 1364 LFENGIPLMP 1373
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 LWEDGSPLMP 10
L+E+G PLMP
Sbjct: 1364 LFENGIPLMP 1373
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 WEDGSP 7
WEDG+P
Sbjct: 6 WEDGAP 11
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 WEDGSP 7
WEDG+P
Sbjct: 6 WEDGAP 11
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 WEDGSP 7
WE+GSP
Sbjct: 140 WENGSP 145
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 2 WEDGSPLMP 10
W+ SPL+P
Sbjct: 560 WQYNSPLVP 568
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 WEDGSPLMP 10
W+ SPL+P
Sbjct: 560 WQYNSPLVP 568
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 2 WEDGSPLMP 10
W+ SPL+P
Sbjct: 560 WQYNSPLVP 568
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 2 WEDGSPLMP 10
W+ SPL+P
Sbjct: 560 WQYNSPLVP 568
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 2 WEDGSPLMP 10
W+ GSPL P
Sbjct: 602 WDVGSPLSP 610
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 WEDGSPLMP 10
W+ SPL P
Sbjct: 559 WQYNSPLTP 567
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 WEDGSPLMP 10
W+ SPL P
Sbjct: 559 WQYNSPLTP 567
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 EDGSPLMP 10
E G+PL P
Sbjct: 1381 EQGTPLTP 1388
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 EDGSPLMP 10
E G+PL P
Sbjct: 1381 EQGTPLTP 1388
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 WEDGSPLMP 10
W+ SPL P
Sbjct: 559 WQYNSPLTP 567
>sp|VE6_HPV43|PROTEIN E6|Human papillomavirus 43
Query: 1 LWEDGSPL 8
+W DG P
Sbjct: 54 VWRDGYPF 61
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 EDGSPL 8
EDG+PL
Sbjct: 524 EDGAPL 529
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 EDGSPL 8
EDG+PL
Sbjct: 524 EDGAPL 529
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 1 LWEDGSPL 8
LW G+PL
Sbjct: 404 LWAPGTPL 411
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 1 LWEDGSPL 8
LW G+PL
Sbjct: 404 LWAPGTPL 411
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LWEDGSPL 8
LW G+PL
Sbjct: 404 LWAPGTPL 411
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LWEDGSPLM 9
+W+D SP +
Sbjct: 43 VWKDASPTL 51
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 2 WEDGSPLMP 10
W+ SP +P
Sbjct: 559 WQFNSPFVP 567
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 WEDGSPLMP 10
WE G P P
Sbjct: 5491 WEVGKPRPP 5499
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 WEDGSPLMP 10
WE G P P
Sbjct: 5468 WEVGKPRPP 5476
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 LWEDG 5
+WEDG
Sbjct: 534 VWEDG 538
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 WEDGSPLMP 10
W+ SP +P
Sbjct: 568 WQFNSPFVP 576
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 3 EDGSPLM 9
EDGSP++
Sbjct: 109 EDGSPVV 115
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 2 WEDGSPLMP 10
W+ SP +P
Sbjct: 568 WQFNSPFVP 576
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LWEDGS 6
W DGS
Sbjct: 4353 FWRDGS 4358
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 LWEDGS 6
W DGS
Sbjct: 4391 FWRDGS 4396
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 LWEDGS 6
W DGS
Sbjct: 4411 FWRDGS 4416
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 LWEDGS 6
W DGS
Sbjct: 4441 FWRDGS 4446
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LWEDGS 6
W DGS
Sbjct: 4353 FWRDGS 4358
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 LWEDGS 6
W DGS
Sbjct: 4391 FWRDGS 4396
Query: 1 LWEDGSPL 8
LW G P+
Sbjct: 6860 LWNYGKPI 6867
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 LWEDGS 6
W DGS
Sbjct: 4411 FWRDGS 4416
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 LWEDGS 6
W DGS
Sbjct: 4441 FWRDGS 4446
Query: 1 LWEDGSPL 8
LW G P+
Sbjct: 6910 LWNYGKPI 6917
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 DGSPLMP 10
DGSP+ P
Sbjct: 547 DGSPVDP 553
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 DGSPLMP 10
DGSP+ P
Sbjct: 547 DGSPVDP 553
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 5 GSPLMP 10
G+PL+P
Sbjct: 136 GTPLLP 141
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 LWEDGSP 7
W++G P
Sbjct: 748 FWQEGQP 754
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LWEDGSPL 8
+W G PL
Sbjct: 518 VWRGGEPL 525
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 3 EDGSPL 8
+DGSP+
Sbjct: 546 DDGSPM 551
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 3 EDGSPL 8
+DGSP+
Sbjct: 547 DDGSPM 552
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LWEDGSPL 8
+W G PL
Sbjct: 518 VWRGGEPL 525
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 2 WEDGSPLMP 10
W+ SP +P
Sbjct: 569 WQFTSPFVP 577
>sp|VE6_HPV29|PROTEIN E6|Human papillomavirus 29
Query: 1 LWEDGSP 7
+W+ G+P
Sbjct: 52 VWKSGAP 58
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 2 WEDGSPLMP 10
W+ SP +P
Sbjct: 235 WQFTSPFVP 243
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 EDGSPLM 9
DG PLM
Sbjct: 119 RDGEPLM 125
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 EDGSPLM 9
DG PLM
Sbjct: 119 RDGEPLM 125
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 EDGSPLM 9
DG PLM
Sbjct: 119 RDGEPLM 125
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 EDGSPLM 9
DG PLM
Sbjct: 119 RDGEPLM 125
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 EDGSPLM 9
DG PLM
Sbjct: 119 RDGEPLM 125
>sp|TAX_HTLV2|PROTEIN Tax-2|Human T-cell leukemia virus 2
Query: 2 WEDGSPLM 9
+ DGSP++
Sbjct: 250 FNDGSPMI 257
45|Sequence|221|230|SPLMPHLFRV
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 PLMPHLFRV 10
P++PH FRV
Sbjct: 1649 PVIPHPFRV 1657
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 PLMPHLFRV 10
P++PH FRV
Sbjct: 1649 PVIPHPFRV 1657
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 PLMPHLFRV 10
P++PH FRV
Sbjct: 1649 PVIPHPFRV 1657
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 3 LMPHLFRV 10
++PH+F+V
Sbjct: 105 IVPHIFKV 112
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 1 SPLMPHLF 8
SPL PH F
Sbjct: 151 SPLDPHDF 158
>sp|U6_HHV6U|UNCHARACTERIZED protein U6|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SPLMPHL 7
SPLMP+L
Sbjct: 12 SPLMPNL 18
>sp|VP24_EBOZ5|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 LMPHLFR 9
L PHLF+
Sbjct: 75 LFPHLFQ 81
>sp|VP24_EBOG4|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 3 LMPHLFR 9
L PHLF+
Sbjct: 75 LFPHLFQ 81
>sp|UL79_HCMVM|PROTEIN UL79|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SPLMPHLFR 9
P PHL+R
Sbjct: 90 QPYWPHLYR 98
>sp|UL79_HCMVA|PROTEIN UL79|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SPLMPHLFR 9
P PHL+R
Sbjct: 90 QPYWPHLYR 98
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 MPHLFRV 10
MP LF+V
Sbjct: 6786 MPSLFKV 6792
>sp|VP24_EBOZM|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 LMPHLFR 9
L PHLF+
Sbjct: 75 LFPHLFQ 81
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 SPLMPHLFRV 10
PL HLFR
Sbjct: 95 QPLYRHLFRT 104
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SPLMPHLFRV 10
PL HLFR
Sbjct: 95 QPLYRHLFRT 104
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 PLMPHLFRV 10
P +PH F+V
Sbjct: 1218 PAVPHEFQV 1226
>sp|VP24_EBOSU|MEMBRANE-ASSOCIATED protein VP24|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 LMPHLFR 9
L PHLF+
Sbjct: 75 LFPHLFK 81
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 PLMPHLFRV 10
P +PH F+V
Sbjct: 1218 PAVPHEFQV 1226
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 3 LMPHLFRV 10
LMP FR+
Sbjct: 1808 LMPSSFRI 1815
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SPLMPHLF 8
+PL+ HLF
Sbjct: 15 TPLLVHLF 22
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SPLMPHL 7
SPLM H+
Sbjct: 408 SPLMRHI 414
>sp|VP24_EBORR|MEMBRANE-ASSOCIATED protein VP24|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 LMPHLFR 9
L PHLF+
Sbjct: 75 LFPHLFQ 81
>sp|VP24_EBORE|MEMBRANE-ASSOCIATED protein VP24|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 LMPHLFR 9
L PHLF+
Sbjct: 75 LFPHLFQ 81
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 MPHLFRV 10
+PH +RV
Sbjct: 495 IPHFYRV 501
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 MPHLFRV 10
+PH +RV
Sbjct: 495 IPHFYRV 501
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SPLMPHL 7
+PL PH+
Sbjct: 133 APLNPHI 139
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 2 PLMPHL 7
PL PHL
Sbjct: 508 PLQPHL 513
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 SPLMPHL 7
+PL PH+
Sbjct: 133 APLNPHI 139
46|Sequence|226|235|HLFRVRGAVS
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 1 HLFRVRGAVS 10
LFRVRG ++
Sbjct: 287 QLFRVRGKIN 296
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 3 FRVRGAVS 10
F++RGA S
Sbjct: 570 FKIRGATS 577
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 1 HLFRVR 6
H+F+VR
Sbjct: 108 HIFKVR 113
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 HLFRVRGAV 9
HLF GAV
Sbjct: 259 HLFNRAGAV 267
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 1 HLFRVRGAV 9
HLF GA+
Sbjct: 256 HLFNRAGAI 264
47|Sequence|231|240|RGAVSQTYPS
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RGAVSQTYP 9
+G VSQ YP
Sbjct: 123 KGKVSQNYP 131
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RGAVSQTYP 9
+G VSQ YP
Sbjct: 123 KGKVSQNYP 131
>sp|GK_HHV1R|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R15)
Query: 1 RGAVSQTYP 9
RGA + TYP
Sbjct: 240 RGACAITYP 248
>sp|GK_HHV1M|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain MP)
Query: 1 RGAVSQTYP 9
RGA + TYP
Sbjct: 240 RGACAITYP 248
>sp|GK_HHV11|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain 17)
Query: 1 RGAVSQTYP 9
RGA + TYP
Sbjct: 240 RGACAITYP 248
>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)
Query: 1 RGAVSQTYP 9
RGA + TYP
Sbjct: 240 RGACAITYP 248
>sp|GK_HHV19|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R19)
Query: 1 RGAVSQTYP 9
RGA + TYP
Sbjct: 240 RGACAITYP 248
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 GAVSQTYPS 10
GAV+ YPS
Sbjct: 1611 GAVALDYPS 1619
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 GAVSQTYPS 10
GAV+ YPS
Sbjct: 1611 GAVALDYPS 1619
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 GAVSQTYPS 10
GAV+ YPS
Sbjct: 1611 GAVALDYPS 1619
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 GAVSQTYPS 10
GAV+ YPS
Sbjct: 1611 GAVALDYPS 1619
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 GAVSQTYPS 10
GAV+ YPS
Sbjct: 1611 GAVALDYPS 1619
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 GAVSQTYPS 10
GAV+ YPS
Sbjct: 1611 GAVALDYPS 1619
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 GAVSQTYPS 10
GAV+ YPS
Sbjct: 1611 GAVALDYPS 1619
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 GAVSQTYPS 10
GAV+ YPS
Sbjct: 1611 GAVALDYPS 1619
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 GAVSQTYPS 10
GAV+ YPS
Sbjct: 1611 GAVALDYPS 1619
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 GAVSQTYPS 10
GAVS YP+
Sbjct: 1622 GAVSLDYPT 1630
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 GAVSQTYPS 10
GAV+ YPS
Sbjct: 1605 GAVNLDYPS 1613
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 GAVSQTYP 9
GAVS YP
Sbjct: 1628 GAVSLDYP 1635
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 GAVSQTYP 9
GAVS YP
Sbjct: 1627 GAVSLDYP 1634
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 GAVSQTYP 9
GAVS YP
Sbjct: 1628 GAVSLDYP 1635
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 GAVSQTYP 9
GAVS YP
Sbjct: 1628 GAVSLDYP 1635
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 GAVSQTYP 9
GAVS YP
Sbjct: 1628 GAVSLDYP 1635
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 GAVSQTYP 9
GAVS YP
Sbjct: 1627 GAVSLDYP 1634
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 AVSQTYP 9
+VSQ YP
Sbjct: 133 SVSQNYP 139
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 GAVSQTYPS 10
GAV+ YP+
Sbjct: 1625 GAVTLDYPT 1633
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 128 VSQNYP 133
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 AVSQTYP 9
VSQ YP
Sbjct: 123 GVSQNYP 129
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 AVSQTYP 9
VSQ YP
Sbjct: 123 GVSQNYP 129
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 128 VSQNYP 133
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 128 VSQNYP 133
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 AVSQTYP 9
VSQ YP
Sbjct: 123 GVSQNYP 129
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 AVSQTYP 9
VSQ YP
Sbjct: 127 GVSQNYP 133
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 128 VSQNYP 133
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 128 VSQNYP 133
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 129 VSQNYP 134
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 128 VSQNYP 133
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 124 VSQNYP 129
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 130 VSQNYP 135
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 127 VSQNYP 132
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 128 VSQNYP 133
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 AVSQTYP 9
VSQ YP
Sbjct: 123 GVSQNYP 129
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 128 VSQNYP 133
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 128 VSQNYP 133
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 128 VSQNYP 133
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 131 VSQNYP 136
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 128 VSQNYP 133
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 125 VSQNYP 130
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 GAVSQTYPS 10
GAV+ YP+
Sbjct: 1622 GAVALDYPA 1630
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 AVSQTYP 9
+VSQ YP
Sbjct: 133 SVSQNYP 139
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 128 VSQNYP 133
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 128 VSQNYP 133
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 128 VSQNYP 133
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 GAVSQTYPS 10
GAV+ YP+
Sbjct: 1626 GAVALDYPA 1634
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 128 VSQNYP 133
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 128 VSQNYP 133
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 128 VSQNYP 133
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 GAVSQTYPS 10
GAV+ YP+
Sbjct: 1626 GAVALDYPA 1634
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 128 VSQNYP 133
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 VSQTYP 9
VSQ YP
Sbjct: 128 VSQNYP 133
48|Sequence|236|245|QTYPSGTCAY
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 QTYPSGTCAY 10
Q YP+ +C Y
Sbjct: 3082 QVYPTLSCVY 3091
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 QTYPSGTCAY 10
Q YP+ +C Y
Sbjct: 3082 QVYPTLSCVY 3091
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 2 TYPSGTCAY 10
T P+G C Y
Sbjct: 656 TRPTGACVY 664
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 2 TYPSGTCAY 10
T P+G C Y
Sbjct: 654 TRPTGACVY 662
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 1 QTYPSGTCA 9
+ +P GTC+
Sbjct: 171 KMFPKGTCS 179
>sp|ORF5_MERS1|NON-STRUCTURAL protein ORF5|Middle East respiratory syndrome-related coronavirus
Query: 3 YPSGTC 8
YP+G+C
Sbjct: 91 YPTGSC 96
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 3 YPSGTCA 9
+P+GTC+
Sbjct: 173 FPTGTCS 179
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 1 QTYPSGTCA 9
+ +PSG C+
Sbjct: 171 RVFPSGNCS 179
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 YPSGT 7
YPSGT
Sbjct: 1617 YPSGT 1621
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 YPSGT 7
YPSGT
Sbjct: 1617 YPSGT 1621
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 3 YPSGT 7
YPSGT
Sbjct: 1617 YPSGT 1621
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 YPSGT 7
YPSGT
Sbjct: 1617 YPSGT 1621
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 YPSGT 7
YPSGT
Sbjct: 1617 YPSGT 1621
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 YPSGT 7
YPSGT
Sbjct: 1617 YPSGT 1621
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 YPSGT 7
YPSGT
Sbjct: 1617 YPSGT 1621
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 YPSGT 7
YPSGT
Sbjct: 1617 YPSGT 1621
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 YPSGT 7
YPSGT
Sbjct: 1617 YPSGT 1621
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 YPSGT 7
YPSGT
Sbjct: 1611 YPSGT 1615
>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)
Query: 1 QTYPSGTCA 9
+ +PSG C+
Sbjct: 171 RVFPSGKCS 179
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 QTYPSGTCAY 10
Q YP C Y
Sbjct: 3140 QVYPICACVY 3149
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 QTYPSGTCAY 10
Q YP C Y
Sbjct: 3170 QVYPICACVY 3179
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 1 QTYPSGTCA 9
+ +PSG C+
Sbjct: 171 RVFPSGKCS 179
>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)
Query: 1 QTYPSGTCA 9
+ +PSG C+
Sbjct: 171 RVFPSGKCS 179
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 QTYPSGTCAY 10
Q YP C Y
Sbjct: 3120 QVYPICACVY 3129
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 1 QTYPSGTCA 9
+ +PSG C+
Sbjct: 171 RVFPSGKCS 179
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 QTYPSGTCAY 10
Q YP C Y
Sbjct: 3170 QVYPICACVY 3179
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 QTYPSGTCAY 10
Q YP C Y
Sbjct: 3140 QVYPICACVY 3149
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 QTYPSGTCAY 10
Q YP C Y
Sbjct: 3120 QVYPICACVY 3129
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 1 QTYPSGTCA 9
+ +PSG C+
Sbjct: 171 RVFPSGKCS 179
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 QTYPSGTC 8
+ +P GTC
Sbjct: 1147 KAFPYGTC 1154
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 4 PSGTCAY 10
P+G C Y
Sbjct: 287 PTGVCVY 293
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 4 PSGTCAY 10
P+G C Y
Sbjct: 287 PTGVCVY 293
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 QTYPSGTC 8
+ +P GTC
Sbjct: 1147 KAFPYGTC 1154
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 1 QTYPSGTC 8
+ +PSG C
Sbjct: 171 RVFPSGKC 178
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 3 YPSGTC 8
YP G C
Sbjct: 1101 YPPGLC 1106
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 QTYPSGTCAY 10
TYP G+ Y
Sbjct: 796 HTYPDGSKVY 805
>sp|PG130_MONPV|39KDA core protein OPG130|Monkeypox virus (MPXV)
Query: 1 QTYPSGTC 8
QT P+ TC
Sbjct: 164 QTLPTTTC 171
>sp|PG130_VACCC|39KDA core protein OPG130|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 QTYPSGTC 8
QT P+ TC
Sbjct: 164 QTLPTTTC 171
>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 QTYPSGTCA 9
+ +P G+C+
Sbjct: 171 RMFPKGSCS 179
>sp|UL62_HCMVA|UNCHARACTERIZED protein UL62|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PSGTC 8
P+GTC
Sbjct: 178 PTGTC 182
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 4 PSGTCAY 10
P+G C Y
Sbjct: 651 PTGACVY 657
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 4 PSGTC 8
P+GTC
Sbjct: 116 PNGTC 120
49|Sequence|241|250|GTCAYIQRGA
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 GTCAYIQRG 9
G+C Y Q G
Sbjct: 2971 GSCEYAQEG 2979
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 GTCAYIQRG 9
G+C Y Q G
Sbjct: 2971 GSCEYAQEG 2979
>sp|UL140_HCMVM|PROTEIN UL140|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CAYIQR 8
CA+IQR
Sbjct: 59 CAWIQR 64
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 GTCAYI 6
G CAYI
Sbjct: 1238 GDCAYI 1243
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 GTCAYI 6
G CAYI
Sbjct: 1261 GDCAYI 1266
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 GTCAYI 6
G CAYI
Sbjct: 1261 GDCAYI 1266
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 GTCAYIQRG 9
G CA ++RG
Sbjct: 1717 GFCAGLKRG 1725
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 TCAYIQR 8
TC +IQ+
Sbjct: 30 TCGFIQQ 36
>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 2 TCAYIQRG 9
TC+ + RG
Sbjct: 36 TCSAVSRG 43
>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 2 TCAYIQRG 9
TC+ + RG
Sbjct: 36 TCSAVSRG 43
>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)
Query: 2 TCAYIQRGA 10
T Y+QRG
Sbjct: 246 TVRYLQRGG 254
>sp|UL24_HHV11|PROTEIN UL24|Human herpesvirus 1 (strain 17)
Query: 2 TCAYIQRG 9
TC YI G
Sbjct: 102 TCKYISSG 109
>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)
Query: 2 TCAYIQRGA 10
T Y+QRG
Sbjct: 246 TVRYLQRGG 254
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GTCAYIQ 7
G C YI+
Sbjct: 289 GVCVYIE 295
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 1 GTCAYIQ 7
G C YI+
Sbjct: 289 GVCVYIE 295
50|Sequence|246|255|IQRGAVYAEN
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 1 IQRGAVYA 8
+QRG +YA
Sbjct: 171 LQRGLIYA 178
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 IQRGAVYAEN 10
+QRG Y+E+
Sbjct: 347 LQRGPQYSEH 356
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 IQRGAVYAEN 10
+QRG Y+E+
Sbjct: 357 LQRGPQYSEH 366
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 IQRGAVYAEN 10
+QRG Y+E+
Sbjct: 357 LQRGPQYSEH 366
>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2
Query: 1 IQRGAVYAE 9
+QR A+Y E
Sbjct: 1 MQRAAMYEE 9
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 2 QRGAVYA 8
QRG VY+
Sbjct: 677 QRGLVYS 683
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 QRGAVYA 8
QRG VY+
Sbjct: 677 QRGLVYS 683
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 IQRGAVYAE 9
+ RG VY E
Sbjct: 1655 VWRGVVYCE 1663
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 QRGAVYA 8
RGAVY+
Sbjct: 796 HRGAVYS 802
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 3 RGAVYA 8
RGAVY+
Sbjct: 827 RGAVYS 832
51|Sequence|251|260|VYAENCILAA
>sp|PG060_VARV|PROTEIN OPG060|Variola virus
Query: 4 ENCILA 9
+NCILA
Sbjct: 41 DNCILA 46
>sp|PG060_VAR67|PROTEIN OPG060|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 ENCILA 9
+NCILA
Sbjct: 41 DNCILA 46
>sp|PG060_VACCP|PROTEIN OPG060|Vaccinia virus (strain L-IVP) (VACV)
Query: 4 ENCILA 9
+NCILA
Sbjct: 38 DNCILA 43
>sp|PG060_VACCC|PROTEIN OPG060|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 ENCILA 9
+NCILA
Sbjct: 38 DNCILA 43
>sp|PG060_MONPV|PROTEIN OPG060|Monkeypox virus (MPXV)
Query: 4 ENCILA 9
+NCILA
Sbjct: 38 DNCILA 43
>sp|UL20_HHV11|PROTEIN UL20|Human herpesvirus 1 (strain 17)
Query: 1 VYAENCILAA 10
V A CILAA
Sbjct: 92 VVAPACILAA 101
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 VYAENCI 7
V AENC+
Sbjct: 1066 VRAENCV 1072
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 VYAENCI 7
VY E+C+
Sbjct: 1377 VYVEHCL 1383
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 VYAENCI 7
VY E+C+
Sbjct: 1376 VYVEHCL 1382
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 VYAENCI 7
VY E+C+
Sbjct: 1375 VYVEHCL 1381
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 VYAENCI 7
VY E+C+
Sbjct: 1396 VYVEHCL 1402
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 YAENCILAA 10
YA C+L++
Sbjct: 2982 YASGCVLSS 2990
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 YAENCILAA 10
YA C+L++
Sbjct: 2982 YASGCVLSS 2990
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 YAENCILAA 10
YA C+L++
Sbjct: 2952 YASGCVLSS 2960
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 1 VYAENCILAA 10
VY ++C A
Sbjct: 241 VYGDSCFFCA 250
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 YAENCILAA 10
YA C+L++
Sbjct: 2894 YASGCVLSS 2902
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 YAENCILAA 10
YA C+L++
Sbjct: 2932 YASGCVLSS 2940
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 YAENCILAA 10
YA C+L++
Sbjct: 2952 YASGCVLSS 2960
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 YAENCILAA 10
YA C+L++
Sbjct: 2894 YASGCVLSS 2902
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 YAENCILAA 10
YA C+L++
Sbjct: 2932 YASGCVLSS 2940
52|Sequence|256|265|CILAAFSICQ
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CILAAFSICQ 10
CI A SICQ
Sbjct: 342 CITALASICQ 351
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CILAAFSICQ 10
CI A SICQ
Sbjct: 342 CITALASICQ 351
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CILAAFSICQ 10
CI A SICQ
Sbjct: 342 CITALASICQ 351
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CILAAFSICQ 10
CI A SICQ
Sbjct: 342 CITALASICQ 351
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CILAAFSICQ 10
CI A SICQ
Sbjct: 342 CITALASICQ 351
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CILAAFSICQ 10
CI A SICQ
Sbjct: 342 CITALASICQ 351
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CILAAFSICQ 10
CI A SICQ
Sbjct: 342 CITALASICQ 351
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CILAAFSICQ 10
CI A SICQ
Sbjct: 342 CITALASICQ 351
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CILAAFSICQ 10
CI A SICQ
Sbjct: 321 CITALASICQ 330
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CILAAFSICQ 10
CI A SICQ
Sbjct: 342 CITALASICQ 351
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CILAAFSICQ 10
CI A SICQ
Sbjct: 342 CITALASICQ 351
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CILAAFSICQ 10
CI A SICQ
Sbjct: 342 CITALASICQ 351
>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)
Query: 1 CILAAF 6
CILAAF
Sbjct: 218 CILAAF 223
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 1 CILAAF 6
CILAAF
Sbjct: 218 CILAAF 223
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CILAAF 6
CILAAF
Sbjct: 218 CILAAF 223
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 CILAAFSIC 9
C L A S+C
Sbjct: 325 CYLQALSVC 333
>sp|VP6_ROTJ1|INTERMEDIATE capsid protein VP6|Rotavirus X (strain
Query: 1 CILAAFS 7
C++AAFS
Sbjct: 387 CMIAAFS 393
>sp|VP6_ROTB2|INTERMEDIATE capsid protein VP6|Rotavirus X (isolate
Query: 1 CILAAFS 7
C++AAFS
Sbjct: 387 CMIAAFS 393
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 CILAAFSICQ 10
CI A S CQ
Sbjct: 1769 CISALSSFCQ 1778
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 CILAAFSIC 9
C L+A S C
Sbjct: 1303 CFLSAASAC 1311
>sp|FUS_HRSVR|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 2 ILAAFSIC 9
ILAA ++C
Sbjct: 14 ILAAVTLC 21
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 ILAAFSIC 9
ILA S+C
Sbjct: 30 ILATLSLC 37
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 ILAAFSIC 9
ILA S+C
Sbjct: 30 ILATLSLC 37
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CILAAFSI 8
C+ AAF +
Sbjct: 2222 CVTAAFGV 2229
53|Sequence|261|273|FSICQKKANLRAQ
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 1 FSICQKKANLR 11
F IC+KK LR
Sbjct: 563 FCICRKKIGLR 573
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 1 FSICQKKANLR 11
F +C+KK LR
Sbjct: 564 FCVCKKKIGLR 574
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 FSICQKKANLR 11
F +C+KK LR
Sbjct: 563 FCVCRKKIGLR 573
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 SICQKKANL 10
++C K ANL
Sbjct: 6038 AVCSKHANL 6046
>sp|CEP2_HHV7J|CYTOPLASMIC envelopment protein 2|Human herpesvirus 7 (strain JI)
Query: 1 FSICQKK 7
FS+C+KK
Sbjct: 23 FSVCKKK 29
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 SICQKKANL 10
++C K ANL
Sbjct: 6063 AVCSKHANL 6071
>sp|PG189_VARV|ANKYRIN repeat protein OPG189|Variola virus
Query: 1 FSICQKKANL 10
F IC + AN+
Sbjct: 228 FEICLENANI 237
>sp|PG189_VAR67|ANKYRIN repeat protein OPG189|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 FSICQKKANL 10
F IC + AN+
Sbjct: 228 FEICLENANI 237
>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)
Query: 1 FSICQKKANL 10
F IC + AN+
Sbjct: 231 FEICLENANI 240
>sp|PG189_VACCC|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FSICQKKANL 10
F IC + AN+
Sbjct: 228 FEICLENANI 237
>sp|VCYCL_HHV8P|VIRAL cyclin homolog|Human herpesvirus 8 type P
Query: 1 FSICQK 6
FS+CQ+
Sbjct: 59 FSVCQE 64
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 ICQKKANLR 11
IC K N+R
Sbjct: 547 ICIKNGNMR 555
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 3 ICQKKANLR 11
IC K N+R
Sbjct: 557 ICIKNGNMR 565
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 3 ICQKKANLR 11
IC K N+R
Sbjct: 557 ICIKNGNMR 565
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 3 ICQKKANLR 11
IC K N+R
Sbjct: 557 ICIKNGNMR 565
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 3 ICQKKANLR 11
IC K N+R
Sbjct: 557 ICIKNGNMR 565
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 3 ICQKKANLR 11
IC K N+R
Sbjct: 557 ICIKNGNMR 565
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 3 ICQKKANLR 11
IC K N+R
Sbjct: 557 ICIKNGNMR 565
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 3 ICQKKANLR 11
IC K N+R
Sbjct: 557 ICIKNGNMR 565
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 3 ICQKKANLR 11
IC K N+R
Sbjct: 557 ICIKNGNMR 565
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 2 SICQKK 7
SIC+KK
Sbjct: 359 SICEKK 364
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 4 CQKKANLRAQ 13
C K+ N RA+
Sbjct: 443 CSKRLNKRAE 452
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 2 SICQKK 7
SIC+KK
Sbjct: 359 SICEKK 364
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 SICQKK 7
SIC+KK
Sbjct: 359 SICEKK 364