NEUG_HUMAN Blast Output
Viruses
1|Sequence|1|10|MDCCTENACS

>sp|VPK2_SWPVK|SERINE/THREONINE-PROTEIN kinase 2|Swinepox virus (strain Kasza) (SWPV)

Query: 3 CCTENAC 9
CCT+N C
Sbjct: 400 CCTKNTC 406


>sp|VP2_AHSV|OUTER capsid protein VP2|African horse sickness virus (AHSV)

Query: 2 DCCTENACS 10
DCC ++CS
Sbjct: 726 DCCWISSCS 734


>sp|POLG_SUMVS|GENOME polyprotein|Sugarcane mosaic virus (strain SC)

Query: 4 CTENACS 10
C EN CS
Sbjct: 216 CIENGCS 222


>sp|POLG_MDMV|GENOME polyprotein|Maize dwarf mosaic virus (MDMV)

Query: 4 CTENACS 10
C EN CS
Sbjct: 231 CIENGCS 237


>sp|RIR2_PSHV1|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 MDCCTENAC 9
+DC TE+ C
Sbjct: 46 VDCLTEDEC 54


>sp|DPOL_HVAVE|DNA polymerase|Heliothis virescens ascovirus 3e (HvAV-3e)

Query: 2 DCCTENAC 9
DCCT C
Sbjct: 941 DCCTITLC 948


>sp|PP62_ASFWA|POLYPROTEIN pp62|African swine fever virus (isolate

Query: 2 DCCTENACS 10
DC +N CS
Sbjct: 187 DCMRQNWCS 195


>sp|PP62_ASFP4|POLYPROTEIN pp62|African swine fever virus (isolate

Query: 2 DCCTENACS 10
DC +N CS
Sbjct: 187 DCMRQNWCS 195


>sp|PP62_ASFM2|POLYPROTEIN pp62|African swine fever virus (isolate

Query: 2 DCCTENACS 10
DC +N CS
Sbjct: 187 DCMRQNWCS 195


>sp|PP62_ASFB7|POLYPROTEIN pp62|African swine fever virus (strain

Query: 2 DCCTENACS 10
DC +N CS
Sbjct: 187 DCMRQNWCS 195


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 4 CTENACS 10
CT+++CS
Sbjct: 863 CTQSSCS 869


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 4 CTENACS 10
CT+++CS
Sbjct: 863 CTQSSCS 869


>sp|L_PIRVV|RNA-DIRECTED RNA polymerase L|Pirital mammarenavirus (isolate

Query: 1 MDCCTENAC 9
+D C +N+C
Sbjct: 52 VDSCQKNSC 60


>sp|NS2_MPRVN|PUTATIVE non-structural protein 2|Micromonas pusilla reovirus (isolate

Query: 1 MDCCTENACS 10
+D CT CS
Sbjct: 196 LDMCTNLVCS 205


>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 1 MDCCTENACS 10
M CC + CS
Sbjct: 1233 MLCCMTSCCS 1242


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 3 CCTENAC 9
CC +N C
Sbjct: 2284 CCQKNFC 2290


>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 3 CCTENACS 10
C T N+CS
Sbjct: 139 CITNNSCS 146




2|Sequence|6|15|ENACSKPDDD

>sp|RDRP_SHVX|RNA replication protein|Shallot virus X (ShVX)

Query: 2 NACSKPDD 9
NAC KP D
Sbjct: 760 NACPKPSD 767


>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)

Query: 1 ENACSKPDDD 10
E C+KPD++
Sbjct: 200 EMGCAKPDEN 209


>sp|POL_IPMA|INTRACISTERNAL A-particle Pol-related polyprotein|Mouse intracisternal a-particle

Query: 1 ENACSKPD 8
E CS+PD
Sbjct: 796 ERQCSEPD 803


>sp|NS1A_TASV2|NON-STRUCTURAL polyprotein 1A|Turkey astrovirus 2 (TAstV-2)

Query: 4 CSKPD 8
CSKPD
Sbjct: 311 CSKPD 315


>sp|HBSAG_HBVE4|LARGE envelope protein|Hepatitis B virus genotype E

Query: 4 CSKPDD 9
CSKP D
Sbjct: 312 CSKPSD 317


>sp|HBSAG_HBVE2|LARGE envelope protein|Hepatitis B virus genotype E

Query: 4 CSKPDD 9
CSKP D
Sbjct: 312 CSKPSD 317


>sp|NS1AB_TASV2|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 2 (TAstV-2)

Query: 4 CSKPD 8
CSKPD
Sbjct: 311 CSKPD 315


>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United

Query: 2 NACSKPDD 9
+AC KP+D
Sbjct: 836 DACVKPED 843


>sp|CAPSD_FHV|CAPSID protein alpha|Flock house virus (FHV)

Query: 1 ENACSKPD 8
++AC++PD
Sbjct: 242 QSACNEPD 249


>sp|HBSAG_HBVE1|LARGE envelope protein|Hepatitis B virus genotype E

Query: 4 CSKPDD 9
CSKP D
Sbjct: 312 CSKPSD 317


>sp|HBSAG_HBVF6|LARGE envelope protein|Hepatitis B virus genotype F2

Query: 4 CSKPDD 9
CSKP D
Sbjct: 313 CSKPSD 318


>sp|HBSAG_HBVF4|LARGE envelope protein|Hepatitis B virus genotype F2

Query: 4 CSKPDD 9
CSKP D
Sbjct: 313 CSKPSD 318


>sp|AN_PSHV1|ALKALINE nuclease|Psittacid herpesvirus 1 (isolate Amazon

Query: 4 CSKPD 8
CSKPD
Sbjct: 144 CSKPD 148


>sp|HBSAG_HBVF1|LARGE envelope protein|Hepatitis B virus genotype F2

Query: 4 CSKPDD 9
CSKP D
Sbjct: 313 CSKPSD 318




3|Sequence|11|20|KPDDDILDIP

>sp|NRDD_BPT4|ANAEROBIC ribonucleoside-triphosphate reductase|Enterobacteria phage T4

Query: 1 KPDDDILDI 9
KPDDDI+++
Sbjct: 381 KPDDDIIEL 389


>sp|YR458_MIMIV|PUTATIVE ATP-dependent RNA helicase R458|Acanthamoeba polyphaga mimivirus

Query: 2 PDDDIL 7
PDDD+L
Sbjct: 158 PDDDVL 163


>sp|DPOL_RCMVM|DNA polymerase catalytic subunit|Rat cytomegalovirus (strain

Query: 2 PDDDILDI 9
PD+D+L++
Sbjct: 678 PDEDVLEV 685


>sp|Y122_OSHVF|UNCHARACTERIZED protein ORF122|Ostreid herpesvirus 1 (isolate France)

Query: 4 DDILDIP 10
DD+LDIP
Sbjct: 8 DDMLDIP 14


>sp|L_MPV15|RNA-DIRECTED RNA polymerase L|Murine pneumonia virus (strain 15)

Query: 4 DDILDIP 10
DD++D+P
Sbjct: 1854 DDLIDLP 1860


>sp|NCAP_IBVV1|NUCLEOPROTEIN infectious bronchitis virus (strain

Query: 3 DDDILDIP 10
DDD+ DIP
Sbjct: 387 DDDVTDIP 394


>sp|L_TAMVU|RNA-DIRECTED RNA polymerase L|Tamiami mammarenavirus (isolate Rat/United States/W

Query: 3 DDDILDI 9
DDD+LD+
Sbjct: 1342 DDDLLDM 1348


>sp|I6_FOWPN|TELOMERE-BINDING protein I6 homolog|Fowlpox virus (strain NVSL) (FPV)

Query: 1 KPDDDILDI 9
KP++++LDI
Sbjct: 50 KPENNLLDI 58


>sp|KITH_EHV2|THYMIDINE kinase|Equine herpesvirus 2 (strain 86/87)

Query: 4 DDILDIP 10
DDI D+P
Sbjct: 132 DDIYDVP 138


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 KPDDDILDI 9
+P D ILDI
Sbjct: 56 EPSDTILDI 64


>sp|POLN_EEVV|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (VEEV)

Query: 1 KPDDDILDI 9
+P D ILDI
Sbjct: 56 EPSDTILDI 64


>sp|O1_FOWPN|PROTEIN O1 homolog|Fowlpox virus (strain NVSL) (FPV)

Query: 2 PDDDILD 8
PDDDI+D
Sbjct: 210 PDDDIID 216




4|Sequence|16|25|ILDIPLDDPG

>sp|D10_RFVKA|MRNA-DECAPPING protein D10|Rabbit fibroma virus (strain Kasza)

Query: 2 LDIPLDDPG 10
L++PLDDPG
Sbjct: 109 LNVPLDDPG 117


>sp|YR229_MIMIV|PUTATIVE ankyrin repeat protein R229|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 LDIPLDDPG 10
+D+PLDDPG
Sbjct: 109 VDLPLDDPG 117


>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19

Query: 1 ILDIPLDD 8
+L+IPLDD
Sbjct: 38 LLEIPLDD 45


>sp|VE6_HPV14|PROTEIN E6|Human papillomavirus 14

Query: 1 ILDIPLDD 8
+L+IPLDD
Sbjct: 46 LLEIPLDD 53


>sp|VE6_HPV24|PROTEIN E6|Human papillomavirus 24

Query: 1 ILDIPLDD 8
+L+IPLDD
Sbjct: 16 LLNIPLDD 23


>sp|VE6_HPV21|PROTEIN E6|Human papillomavirus 21

Query: 1 ILDIPLDD 8
+L+IPLDD
Sbjct: 43 LLEIPLDD 50


>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1 ILDIPLDD 8
+LD+PLD+
Sbjct: 417 VLDVPLDE 424


>sp|VE6_HPV20|PROTEIN E6|Human papillomavirus 20

Query: 1 ILDIPLDD 8
+L+IPLDD
Sbjct: 40 LLEIPLDD 47


>sp|VE6_HPV25|PROTEIN E6|Human papillomavirus 25

Query: 1 ILDIPLDD 8
+L+IPLDD
Sbjct: 33 LLEIPLDD 40


>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P

Query: 2 LDIPLDDP 9
LD+PL++P
Sbjct: 320 LDLPLNNP 327


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 4 IPLDDPG 10
IPLDD G
Sbjct: 410 IPLDDKG 416


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 2 LDIPLDDPG 10
LD+ LDD G
Sbjct: 1447 LDVKLDDDG 1455


>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)

Query: 2 LDIPLDDPG 10
LD+ LDD G
Sbjct: 1376 LDVKLDDDG 1384


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 2 LDIPLDDPG 10
LD+ LDD G
Sbjct: 1448 LDVKLDDDG 1456


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 2 LDIPLDDPG 10
LD+ LDD G
Sbjct: 1448 LDVKLDDDG 1456


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 2 LDIPLDDPG 10
LD+ LDD G
Sbjct: 1448 LDVKLDDDG 1456


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 2 LDIPLDDPG 10
LD+ LDD G
Sbjct: 1448 LDVKLDDDG 1456


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 2 LDIPLDDPG 10
LD+ LDD G
Sbjct: 1447 LDVQLDDDG 1455


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 2 LDIPLDDPG 10
LD+ LDD G
Sbjct: 1441 LDVELDDNG 1449


>sp|ME53_NPVAC|EARLY 53 kDa protein|Autographa californica nuclear polyhedrosis virus

Query: 2 LDIPLDDP 9
++ PLDDP
Sbjct: 192 IEKPLDDP 199


>sp|YL162_MIMIV|PUTATIVE FNIP repeat-containing protein L162|Acanthamoeba polyphaga

Query: 1 ILDIPLDDP 9
ILD+ DDP
Sbjct: 342 ILDLDYDDP 350


>sp|AC132_NPVAC|PROTEIN Ac132|Autographa californica nuclear polyhedrosis virus

Query: 1 ILDIPLDD 8
ILD PLD+
Sbjct: 86 ILDTPLDN 93


>sp|KITH_MEHV1|THYMIDINE kinase|Meleagrid herpesvirus 1 (MeHV-1) (Turkey

Query: 1 ILDIPLDDPG 10
I+ +PL+ PG
Sbjct: 150 IIRLPLESPG 159


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 5 PLDDPG 10
P DDPG
Sbjct: 1004 PADDPG 1009


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 5 PLDDPG 10
P DDPG
Sbjct: 1004 PADDPG 1009


>sp|KITH_MEHVF|THYMIDINE kinase|Meleagrid herpesvirus 1 (strain FC126)

Query: 1 ILDIPLDDPG 10
I+ +PL+ PG
Sbjct: 150 IIRLPLESPG 159


>sp|YL662_MIMIV|UNCHARACTERIZED protein L662|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 ILDIPLDD 8
+ D+P+DD
Sbjct: 115 VQDVPIDD 122


>sp|CAPSD_CRSVL|CAPSID protein|Carnation ringspot virus (isolate Lommel)

Query: 2 LDIPLDD 8
+D+P+DD
Sbjct: 158 IDLPIDD 164




5|Sequence|21|30|LDDPGANAAA

***** No hits found ******


6|Sequence|26|35|ANAAAAKIQA

>sp|V_PIV5|NON-STRUCTURAL protein V|Parainfluenza virus 5 (strain W3)

Query: 2 NAAAAKIQ 9
NAA AKIQ
Sbjct: 53 NAAEAKIQ 60


>sp|STRU2_BPPAJ|STRUCTURAL protein 2|Pseudomonas phage PAJU2

Query: 2 NAAAAKIQA 10
NAAAA +QA
Sbjct: 643 NAAAATLQA 651




7|Sequence|31|40|AKIQASFRGH

>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 2 KIQASFRGH 10
++ +SFRGH
Sbjct: 1777 RVTSSFRGH 1785


>sp|VF453_IIV3|PUTATIVE thioredoxin-like protein 041R|Invertebrate iridescent virus 3

Query: 3 IQASFRGH 10
+QASF GH
Sbjct: 43 VQASFCGH 50


>sp|YL482_MIMIV|PUTATIVE ankyrin repeat protein L482|Acanthamoeba polyphaga mimivirus

Query: 1 AKIQASFRGH 10
A IQAS +GH
Sbjct: 31 AIIQASEKGH 40




8|Sequence|36|45|SFRGHMARKK

>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 1 SFRGHMA 7
S+RGHM
Sbjct: 700 SYRGHMG 706


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 1 SFRGHMA 7
S+RGHM
Sbjct: 700 SYRGHMG 706


>sp|UL62_HCMVA|UNCHARACTERIZED protein UL62|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 FRGHMARKK 10
FRGH+ R++
Sbjct: 73 FRGHLNRER 81


>sp|YR034_MIMIV|UNCHARACTERIZED protein R34|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 FRGHMARKK 10
F G +ARKK
Sbjct: 71 FNGFIARKK 79


>sp|VP03_EHV2|PROBABLE membrane antigen 3|Equine herpesvirus 2 (strain 86/87)

Query: 1 SFRGHMARKK 10
S GH+AR K
Sbjct: 561 SLLGHLARAK 570




9|Sequence|41|50|MARKKIKSGE

>sp|REP_AHEBV|REPLICATION-ASSOCIATED protein|Avon-Heathcote Estuary associated kieseladnavirus

Query: 3 RKKIKSG 9
RKKI+SG
Sbjct: 79 RKKIRSG 85




10|Sequence|46|55|IKSGERGRKG

>sp|DPOL_NPVOP|DNA polymerase|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 3 SGERGRKG 10
SG+R RKG
Sbjct: 943 SGKRARKG 950


>sp|US08_HCMVM|MEMBRANE glycoprotein US8|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 SGERGRK 9
SG RGRK
Sbjct: 99 SGRRGRK 105


>sp|US08_HCMVA|UNIQUE short US8 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 SGERGRK 9
SG RGRK
Sbjct: 99 SGRRGRK 105


>sp|YR458_MIMIV|PUTATIVE ATP-dependent RNA helicase R458|Acanthamoeba polyphaga mimivirus

Query: 2 KSGERGRKG 10
+SG GRKG
Sbjct: 475 RSGRYGRKG 483


>sp|DPOL_HBVGO|PROTEIN P|Gorilla hepatitis B virus (isolate

Query: 1 IKSGERGRKG 10
+ G+RGR G
Sbjct: 221 LAKGQRGRSG 230


>sp|CAPSD_BPCA1|MAJOR capsid protein|Bacteroides phage crAss001 (Bacteroides phage

Query: 1 IKSGERG 7
IK+GERG
Sbjct: 333 IKTGERG 339




11|Sequence|51|60|RGRKGPGPGG

>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2 GRKGPGP 8
GRKGPGP
Sbjct: 822 GRKGPGP 828


>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 GRKGPGP 8
GRKGPGP
Sbjct: 822 GRKGPGP 828


>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 GRKGPGP 8
GRKGPGP
Sbjct: 821 GRKGPGP 827


>sp|PP220_ASFWA|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 RGRKGPGPGG 10
RG GP PGG
Sbjct: 608 RGHVGPNPGG 617


>sp|PP220_ASFP4|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 RGRKGPGPGG 10
RG GP PGG
Sbjct: 608 RGHVGPNPGG 617


>sp|PP220_ASFM2|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 RGRKGPGPGG 10
RG GP PGG
Sbjct: 608 RGHVGPNPGG 617


>sp|PP220_ASFK5|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 RGRKGPGPGG 10
RG GP PGG
Sbjct: 608 RGHVGPNPGG 617


>sp|PP220_ASFB7|POLYPROTEIN pp220|African swine fever virus (strain

Query: 1 RGRKGPGPGG 10
RG GP PGG
Sbjct: 608 RGHVGPNPGG 617


>sp|SPIKE_BC512|SPIKE glycoprotein|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 6 PGPGG 10
PGPGG
Sbjct: 218 PGPGG 222


>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65

Query: 3 RKGPGPG 9
+ GPGPG
Sbjct: 263 KSGPGPG 269


>sp|VE2_HPV04|REGULATORY protein E2|Human papillomavirus 4

Query: 2 GRKGPGPG 9
G+ GPG G
Sbjct: 262 GKSGPGSG 269


>sp|POL_MLVRK|POL polyprotein|Radiation murine leukemia virus (strain

Query: 1 RGRKGPGPGG 10
R R PGP G
Sbjct: 428 RARNTPGPHG 437


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 6 PGPGG 10
PGPGG
Sbjct: 3083 PGPGG 3087


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 6 PGPGG 10
PGPGG
Sbjct: 3072 PGPGG 3076


>sp|ENV_SIVVG|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet

Query: 4 KGPGPGG 10
+GPG GG
Sbjct: 759 EGPGEGG 765


>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)

Query: 2 GRKGPGP 8
G GPGP
Sbjct: 608 GANGPGP 614


>sp|CAP3_ADEB3|PRE-HEXON-LINKING protein IIIa|Bovine adenovirus B serotype 3

Query: 1 RGRKGPGPG 9
R R GPG G
Sbjct: 149 RERTGPGAG 157


>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)

Query: 6 PGPGG 10
PGPGG
Sbjct: 3081 PGPGG 3085


>sp|X_HBVB2|PROTEIN X|Hepatitis B virus genotype B2

Query: 1 RGRKGPGPGG 10
RGR PGP G
Sbjct: 26 RGRPLPGPLG 35


>sp|VG22_ICHVA|UNCHARACTERIZED protein ORF22|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 GRKGPGP 8
GR+ PGP
Sbjct: 1084 GRRPPGP 1090


>sp|X_HBVB8|PROTEIN X|Hepatitis B virus genotype B1

Query: 1 RGRKGPGPGG 10
RGR PGP G
Sbjct: 26 RGRPLPGPLG 35


>sp|POLS_IBDVO|STRUCTURAL polyprotein|Avian infectious bursal disease virus

Query: 2 GRKGPGPG 9
G +GP PG
Sbjct: 879 GHRGPSPG 886


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 6 PGPGG 10
PGPGG
Sbjct: 3107 PGPGG 3111


>sp|POLS_IBDVC|STRUCTURAL polyprotein|Avian infectious bursal disease virus

Query: 2 GRKGPGPG 9
G +GP PG
Sbjct: 879 GHRGPSPG 886


>sp|POLS_IBDV5|STRUCTURAL polyprotein|Avian infectious bursal disease virus

Query: 2 GRKGPGPG 9
G +GP PG
Sbjct: 879 GHRGPSPG 886


>sp|X_HBVB7|PROTEIN X|Hepatitis B virus genotype B1

Query: 1 RGRKGPGPGG 10
RGR PGP G
Sbjct: 26 RGRPLPGPLG 35


>sp|GAG_SFVCP|GAG polyprotein|Simian foamy virus (isolate chimpanzee)

Query: 1 RGRKGPGPG 9
RGR+ P PG
Sbjct: 513 RGRQCPAPG 521


>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 1 RGRKGPGPGG 10
R R PGP G
Sbjct: 1580 RARNTPGPHG 1589


>sp|POL_MLVRD|GAG-POL polyprotein|Radiation murine leukemia virus

Query: 1 RGRKGPGPGG 10
R R PGP G
Sbjct: 1581 RARNTPGPHG 1590


>sp|POLS_IBDVA|STRUCTURAL polyprotein|Avian infectious bursal disease virus

Query: 2 GRKGPGPG 9
G +GP PG
Sbjct: 879 GHRGPSPG 886


>sp|POLS_IBDV|STRUCTURAL polyprotein|Avian infectious bursal disease virus

Query: 2 GRKGPGPG 9
G +GP PG
Sbjct: 879 GHRGPSPG 886


>sp|POL_MLVF5|GAG-POL polyprotein|Friend murine leukemia virus (isolate

Query: 1 RGRKGPGPGG 10
R R PGP G
Sbjct: 1583 RARNTPGPHG 1592


>sp|POL_MLVAV|GAG-POL polyprotein|AKV murine leukemia virus (AKR

Query: 1 RGRKGPGPGG 10
R R PGP G
Sbjct: 1581 RARNTPGPHG 1590


>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)

Query: 2 GRKGPGPGG 10
G +GP PG
Sbjct: 471 GERGPEPGA 479


>sp|X_HBVB3|PROTEIN X|Hepatitis B virus genotype B2

Query: 1 RGRKGPGPGG 10
RGR PGP G
Sbjct: 26 RGRPLPGPLG 35


>sp|POL_MLVFF|GAG-POL polyprotein|Friend murine leukemia virus (isolate

Query: 1 RGRKGPGPGG 10
R R PGP G
Sbjct: 1582 RARNTPGPHG 1591


>sp|POL_MLVBM|GAG-POL polyprotein|Murine leukemia virus (strain BM5

Query: 1 RGRKGPGPGG 10
R R PGP G
Sbjct: 1581 RARNTPGPHG 1590


>sp|POLS_IBDVU|STRUCTURAL polyprotein|Avian infectious bursal disease virus

Query: 2 GRKGPGPG 9
G +GP PG
Sbjct: 879 GHRGPSPG 886


>sp|POL_MLVCB|GAG-POL polyprotein|Cas-Br-E murine leukemia virus

Query: 1 RGRKGPGPGG 10
R R PGP G
Sbjct: 1580 RARNTPGPHG 1589




12|Sequence|56|65|PGPGGPGGAG

>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23

Query: 1 PGPGGPGGAG 10
PGP GG G
Sbjct: 142 PGPAAQGGVG 151


>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)

Query: 1 PGPGGPGGA 9
PGP P GA
Sbjct: 155 PGPAAPSGA 163


>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)

Query: 1 PGPGGPGGA 9
PGP P GA
Sbjct: 155 PGPAAPSGA 163


>sp|DNRE_BPT4|DNA replication protein|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 PGGPGGAG 10
PGG GG G
Sbjct: 264 PGGQGGEG 271


>sp|GP28_BPT4|BASEPLATE hub assembly protein gp28|Enterobacteria phage T4 (Bacteriophage

Query: 1 PGPGGP 6
PGP GP
Sbjct: 160 PGPNGP 165


>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 PGPGGP 6
P PGGP
Sbjct: 722 PTPGGP 727


>sp|MCE_RDVF|PUTATIVE mRNA-capping enzyme P5|Rice dwarf virus (isolate Fujian)

Query: 1 PGPGGPGGAG 10
P PGG G G
Sbjct: 234 PNPGGKGPFG 243


>sp|MCE_RDVA|PUTATIVE mRNA-capping enzyme P5|Rice dwarf virus (isolate Akita)

Query: 1 PGPGGPGGAG 10
P PGG G G
Sbjct: 234 PNPGGKGPFG 243


>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)

Query: 1 PGPGGPGGA 9
PGP P GA
Sbjct: 155 PGPAAPWGA 163


>sp|VE2_HPV47|REGULATORY protein E2|Human papillomavirus 47

Query: 3 PGGPGG 8
PG PGG
Sbjct: 204 PGSPGG 209


>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36

Query: 3 PGGPGG 8
PG PGG
Sbjct: 203 PGSPGG 208


>sp|VE2_BPV6|REGULATORY protein E2|Bos taurus papillomavirus 6 (Bovine

Query: 3 PGGPG 7
PGGPG
Sbjct: 210 PGGPG 214


>sp|SHUT_ADECR|SHUTOFF protein|Canine adenovirus serotype 1 (strain

Query: 2 GPGGPGGA 9
GPGG GA
Sbjct: 542 GPGGENGA 549


>sp|SHUT_ADECC|SHUTOFF protein|Canine adenovirus serotype 1 (strain

Query: 2 GPGGPGGA 9
GPGG GA
Sbjct: 542 GPGGENGA 549


>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)

Query: 2 GPGGPGGAG 10
P GP GAG
Sbjct: 25 APAGPRGAG 33


>sp|L_TUPVT|RNA-DIRECTED RNA polymerase L|Tupaia virus (isolate Tupaia/Thailand/-/1986) (TUPV)

Query: 1 PGPGGPG 7
PG G PG
Sbjct: 1208 PGQGNPG 1214


>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain

Query: 3 PGGPGGAG 10
P GP GAG
Sbjct: 26 PAGPRGAG 33


>sp|CAPSD_BPPHM|CAPSID protein VP1|Bdellovibrio phage phiMH2K (Bacteriophage phiMH2K)

Query: 3 PGGPGGAG 10
PGGPG G
Sbjct: 235 PGGPGNNG 242


>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)

Query: 2 GPGGPGGAG 10
P GP GAG
Sbjct: 25 APAGPRGAG 33


>sp|NS1_ADVG|INITIATOR protein NS1|Aleutian mink disease parvovirus (strain

Query: 5 GPGGAG 10
GPGG G
Sbjct: 432 GPGGTG 437


>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)

Query: 3 PGGPGGA 9
PGGP GA
Sbjct: 65 PGGPAGA 71


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1 PGPGG 5
PGPGG
Sbjct: 3072 PGPGG 3076


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 3 PGGPG 7
PGGPG
Sbjct: 5 PGGPG 9


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 3 PGGPG 7
PGGPG
Sbjct: 5 PGGPG 9


>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)

Query: 1 PGPGG 5
PGPGG
Sbjct: 3081 PGPGG 3085


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 3 PGGPG 7
PGGPG
Sbjct: 5 PGGPG 9


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 3 PGGPG 7
PGGPG
Sbjct: 5 PGGPG 9


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 3 PGGPG 7
PGGPG
Sbjct: 5 PGGPG 9


>sp|TSP_BPSP1|TAIL sheath protein|Bacillus phage SP01 (Bacteriophage SP01)

Query: 1 PGPGGPGGA 9
P P G GGA
Sbjct: 82 PSPEGGGGA 90


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 3 PGGPG 7
PGGPG
Sbjct: 5 PGGPG 9


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 3 PGGPG 7
PGGPG
Sbjct: 5 PGGPG 9


>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 PGPGGPGGAG 10
PGPG P G
Sbjct: 245 PGPGRPEAEG 254


>sp|VG10_SHV21|UNCHARACTERIZED gene 10 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 PGPGGP 6
PG GGP
Sbjct: 381 PGAGGP 386


>sp|UL32_PSHV1|PACKAGING protein UL32|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 PGPGGPGGAG 10
P P G GG G
Sbjct: 436 PHPNGRGGTG 445


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 3 PGGPGG 8
PGGP G
Sbjct: 5 PGGPAG 10


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 3 PGGPG 7
PGGPG
Sbjct: 5 PGGPG 9


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 3 PGGPG 7
PGGPG
Sbjct: 5 PGGPG 9


>sp|VE2_HPV05|REGULATORY protein E2|Human papillomavirus 5

Query: 3 PGGPGG 8
PG PGG
Sbjct: 204 PGSPGG 209


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1 PGPGG 5
PGPGG
Sbjct: 3107 PGPGG 3111




13|Sequence|61|70|PGGAGVARGG

>sp|RPB2_ASFWA|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (isolate

Query: 1 PGGAGVARGG 10
PGG +ARGG
Sbjct: 189 PGGYFIARGG 198


>sp|RPB2_ASFP4|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (isolate

Query: 1 PGGAGVARGG 10
PGG +ARGG
Sbjct: 189 PGGYFIARGG 198


>sp|RPB2_ASFM2|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (isolate

Query: 1 PGGAGVARGG 10
PGG +ARGG
Sbjct: 189 PGGYFIARGG 198


>sp|RPB2_ASFK5|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (isolate

Query: 1 PGGAGVARGG 10
PGG +ARGG
Sbjct: 189 PGGYFIARGG 198


>sp|RPB2_ASFB7|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (strain

Query: 1 PGGAGVARGG 10
PGG +ARGG
Sbjct: 189 PGGYFIARGG 198


>sp|CAPSD_MUMIP|CAPSID protein VP1|Murine minute virus (strain MVM

Query: 1 PGGAGVARGG 10
PG +GV+R G
Sbjct: 102 PGTSGVSRAG 111


>sp|CAPSD_MUMIM|CAPSID protein VP1|Murine minute virus (strain MVMi)

Query: 1 PGGAGVARGG 10
PG +GV+R G
Sbjct: 102 PGTSGVSRAG 111


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 PGGAGVA 7
P GAGVA
Sbjct: 4459 PAGAGVA 4465


>sp|CAPSD_PAVHH|CAPSID protein VP1|Hamster parvovirus H1

Query: 1 PGGAGVARGG 10
PG +GV+R G
Sbjct: 102 PGTSGVSRPG 111


>sp|VP3_SVSAP|UNCHARACTERIZED protein VP3|Sapporo virus (isolate

Query: 1 PGGAGVARGG 10
PGGA V R G
Sbjct: 104 PGGAVVLRSG 113


>sp|VP3_SVM93|UNCHARACTERIZED protein VP3|Sapporo virus (strain Human/United

Query: 1 PGGAGVARGG 10
PGGA V R G
Sbjct: 104 PGGAVVLRSG 113


>sp|US02_BHV1S|PROTEIN US2 homolog|Bovine herpesvirus 1.2 (strain ST)

Query: 1 PGGAGVAR 8
PGGAG+AR
Sbjct: 82 PGGAGLAR 89


>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas)

Query: 2 GGAGVARG 9
GGAG+A G
Sbjct: 15 GGAGMADG 22


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 3 GAGVARGG 10
G GVA+GG
Sbjct: 1523 GVGVAQGG 1530


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 3 GAGVARGG 10
G GVA+GG
Sbjct: 1523 GVGVAQGG 1530


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 3 GAGVARGG 10
G GVA+GG
Sbjct: 1523 GVGVAQGG 1530




14|Sequence|66|78|VARGGAGGGPSGD

>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 ARGGAGGGPSG 12
+ G GG PSG
Sbjct: 292 GKPGCGGAPSG 302


>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 ARGGAGGGPSG 12
+ G GG PSG
Sbjct: 292 GKPGCGGAPSG 302


>sp|POLG_PYFV1|GENOME polyprotein|Parsnip yellow fleck virus (isolate

Query: 7 GGGPSG 12
GGGPSG
Sbjct: 2577 GGGPSG 2582


>sp|TG21_PSHV1|TEGUMENT protein UL21|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 ARGGAGGGPSGD 13
ARGGA GP D
Sbjct: 475 ARGGAFLGPEDD 486


>sp|REP78_AAV2S|PROTEIN Rep78|Adeno-associated virus 2 (isolate Srivastava/1982)

Query: 3 RGGAGGG 9
R GAGGG
Sbjct: 138 RNGAGGG 144


>sp|REP68_AAV2S|PROTEIN Rep68|Adeno-associated virus 2 (isolate Srivastava/1982)

Query: 3 RGGAGGG 9
R GAGGG
Sbjct: 138 RNGAGGG 144


>sp|POLG_RGMVD|GENOME polyprotein|Ryegrass mosaic virus (isolate Denmark/Danish)

Query: 1 VARGGAGGGPS 11
+ RGG G G S
Sbjct: 1199 IVRGGVGTGKS 1209


>sp|GP15_BPT7|INTERNAL virion protein gp15|Escherichia phage T7 (Bacteriophage T7)

Query: 3 RGGAGG 8
RGGAGG
Sbjct: 19 RGGAGG 24


>sp|VL2_HPV50|MINOR capsid protein L2|Human papillomavirus type 50

Query: 4 GGAGGGPS 11
G GGGP+
Sbjct: 148 GAVGGGPT 155


>sp|POL_SIVGB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate GB1)

Query: 3 RGGAGGGPSGD 13
RGG GG +G+
Sbjct: 1344 RGGLGGMTAGE 1354


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra

Query: 7 GGGPSGD 13
G GP+GD
Sbjct: 932 GSGPNGD 938


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 RGGAGGGPSGD 13
RGG GG +G+
Sbjct: 1339 RGGIGGYSAGE 1349


>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)

Query: 3 RGGAGGGPSGD 13
RG GGP GD
Sbjct: 378 RGSRRGGPPGD 388


>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11

Query: 4 GGAGGGPSGD 13
GG GG P D
Sbjct: 130 GGYGGNPGQD 139






THE END