1|SequenceR|10|1|RLPGPEPLGM
>sp|VME1_CVHN1|MEMBRANE protein|Human coronavirus HKU1 (isolate N1)
Query: 1 RLPGPEPLGM 10
RLP +P GM
Sbjct: 207 RLPSSKPSGM 216
>sp|CEP1_HHV11|CYTOPLASMIC envelopment protein 1|Human herpesvirus 1 (strain 17)
Query: 1 RLPGPEP 7
RLPGP P
Sbjct: 243 RLPGPPP 249
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 PGPEPLGM 10
P PEP G+
Sbjct: 759 PAPEPAGL 766
>sp|VP35_EBOZM|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 RLPGPEPLG 9
R+PGPE G
Sbjct: 19 RMPGPELSG 27
>sp|VP35_EBOZ5|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 RLPGPEPLG 9
R+PGPE G
Sbjct: 19 RMPGPELSG 27
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 LPGPEPLG 9
+P P P+G
Sbjct: 1482 VPSPPPMG 1489
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LPGPEPLG 9
+P P P+G
Sbjct: 1482 VPSPPPMG 1489
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 2 LPGPEPL 8
+P PEP+
Sbjct: 152 VPHPEPI 158
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LPGPEPLG 9
+P P P+G
Sbjct: 1482 VPSPPPMG 1489
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LPGPEPLG 9
+PGP P G
Sbjct: 220 IPGPLPAG 227
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LPGPEPLG 9
+PGP P G
Sbjct: 215 IPGPLPAG 222
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LPGPEPLG 9
+PGP P G
Sbjct: 220 IPGPLPAG 227
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LPGPEPLG 9
+PGP P G
Sbjct: 218 IPGPLPAG 225
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LPGPEPLG 9
+PGP P G
Sbjct: 220 IPGPLPAG 227
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LPGPEPLG 9
+PGP P G
Sbjct: 220 IPGPLPAG 227
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LPGPEPLG 9
+PGP P G
Sbjct: 220 IPGPLPAG 227
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LPGPEPLG 9
+PGP P G
Sbjct: 221 IPGPLPAG 228
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PGPEPLG 9
PGP P G
Sbjct: 216 PGPMPAG 222
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LPGPEPLG 9
+PGP P G
Sbjct: 220 IPGPLPAG 227
Query: 1 RLPGPEPLG 9
R P P P+G
Sbjct: 253 RQPNPVPVG 261
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 PGPEPLGM 10
P P+ LG+
Sbjct: 78 PSPQELGL 85
>sp|LF3_EBVG|UNCHARACTERIZED protein LF3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 41 RAPGPEP 47
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 75 RAPGPEP 81
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 109 RAPGPEP 115
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 143 RAPGPEP 149
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 177 RAPGPEP 183
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 211 RAPGPEP 217
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 245 RAPGPEP 251
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 279 RAPGPEP 285
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 313 RAPGPEP 319
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 347 RAPGPEP 353
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 381 RAPGPEP 387
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 415 RAPGPEP 421
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 449 RAPGPEP 455
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 483 RAPGPEP 489
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 517 RAPGPEP 523
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 551 RAPGPEP 557
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 585 RAPGPEP 591
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 619 RAPGPEP 625
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 653 RAPGPEP 659
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 687 RAPGPEP 693
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 721 RAPGPEP 727
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 755 RAPGPEP 761
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 789 RAPGPEP 795
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 823 RAPGPEP 829
>sp|LF3_EBVB9|UNCHARACTERIZED protein LF3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 41 RAPGPEP 47
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 75 RAPGPEP 81
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 109 RAPGPEP 115
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 143 RAPGPEP 149
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 177 RAPGPEP 183
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 211 RAPGPEP 217
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 245 RAPGPEP 251
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 279 RAPGPEP 285
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 313 RAPGPEP 319
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 347 RAPGPEP 353
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 381 RAPGPEP 387
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 415 RAPGPEP 421
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 449 RAPGPEP 455
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 483 RAPGPEP 489
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 517 RAPGPEP 523
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 551 RAPGPEP 557
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 585 RAPGPEP 591
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 619 RAPGPEP 625
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 653 RAPGPEP 659
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 687 RAPGPEP 693
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 721 RAPGPEP 727
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 755 RAPGPEP 761
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 789 RAPGPEP 795
Query: 1 RLPGPEP 7
R PGPEP
Sbjct: 823 RAPGPEP 829
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PGPEPLG 9
PGP P G
Sbjct: 216 PGPMPAG 222
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LPGPEPLG 9
+PGP P G
Sbjct: 220 IPGPLPAG 227
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LPGPEPLG 9
+P P P+G
Sbjct: 1482 VPSPPPVG 1489
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LPGPEPLG 9
+P P P+G
Sbjct: 1482 VPSPPPVG 1489
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LPGPEPLG 9
+P P P+G
Sbjct: 1482 VPSPPPVG 1489
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LPGPEPLG 9
+P P P+G
Sbjct: 1482 VPSPPPVG 1489
>sp|CEP1_HHV2H|CYTOPLASMIC envelopment protein 1|Human herpesvirus 2 (strain HG52)
Query: 1 RLPGPEP 7
+LPGP P
Sbjct: 243 QLPGPVP 249
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 1 RLPGPE 6
R+PGPE
Sbjct: 183 RVPGPE 188
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LPGPEPLG 9
+P P P+G
Sbjct: 1072 VPSPPPVG 1079
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 1 RLPGPE 6
R+PGPE
Sbjct: 183 RVPGPE 188
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 1 RLPGPE 6
R+PGPE
Sbjct: 417 RVPGPE 422
>sp|PG070_MONPV|PROTEIN OPG070|Monkeypox virus (MPXV)
Query: 4 GPEPLGM 10
GP P+G+
Sbjct: 194 GPVPIGI 200
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 3 PGPEP 7
PGPEP
Sbjct: 371 PGPEP 375
>sp|PG070_VARV|PROTEIN OPG070|Variola virus
Query: 4 GPEPLGM 10
GP P+G+
Sbjct: 194 GPVPIGI 200
>sp|PG070_VAR67|PROTEIN OPG070|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 GPEPLGM 10
GP P+G+
Sbjct: 194 GPVPIGI 200
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 1 RLPGPE 6
R+PGPE
Sbjct: 407 RVPGPE 412
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 4 GPEPLG 9
GP+PLG
Sbjct: 807 GPDPLG 812
2|SequenceR|15|6|LLALLRLPGP
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 LALLRLPG 9
LALL LPG
Sbjct: 125 LALLSLPG 132
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 4 LLRLPG 9
+LRLPG
Sbjct: 672 VLRLPG 677
3|SequenceR|20|11|LLLLLLLALL
***** No hits found ******
4|SequenceR|25|16|QLLLLLLLLL
***** No hits found ******
5|SequenceR|30|21|ALHQLQLLLL
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 ALHQLQLLL 9
LH LQL+L
Sbjct: 932 GLHHLQLIL 940
>sp|VL2_HPV6B|MINOR capsid protein L2|Human papillomavirus type 6b
Query: 1 ALHQLQL 7
ALHQ+Q+
Sbjct: 228 ALHQVQV 234
>sp|VL2_HPV6A|MINOR capsid protein L2|Human papillomavirus type 6a
Query: 1 ALHQLQL 7
ALHQ+Q+
Sbjct: 228 ALHQVQV 234
>sp|VL2_HPV55|MINOR capsid protein L2|Human papillomavirus type 55
Query: 1 ALHQLQL 7
ALHQ+Q+
Sbjct: 229 ALHQVQV 235
>sp|VL2_HPV44|MINOR capsid protein L2|Human papillomavirus 44
Query: 1 ALHQLQL 7
ALHQ+Q+
Sbjct: 229 ALHQVQV 235
>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13
Query: 1 ALHQLQL 7
ALHQ+Q+
Sbjct: 230 ALHQVQV 236
>sp|ORF0_VZVO|MEMBRANE protein 0|Varicella-zoster virus (strain Oka vaccine)
Query: 1 ALHQLQLLLL 10
+H+LQL L
Sbjct: 81 GIHRLQLAFL 90
>sp|ORF0_VZVD|MEMBRANE protein 0|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ALHQLQLLLL 10
+H+LQL L
Sbjct: 81 GIHRLQLAFL 90
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 ALHQLQLLLL 10
ALH LLL+
Sbjct: 1462 ALHPFALLLV 1471
6|SequenceR|35|26|DAAAAALHQL
***** No hits found ******
7|SequenceR|40|31|GGLLPDAAAA
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 2 GLLPDA 7
GLLPDA
Sbjct: 546 GLLPDA 551
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 1 GGLLPDA 7
GG+LPD
Sbjct: 340 GGVLPDG 346
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 GLLPDAAA 9
GL+PDA +
Sbjct: 1487 GLIPDACS 1494
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 LLPDAA 8
LLPDAA
Sbjct: 20 LLPDAA 25
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 LLPDAA 8
LLPDAA
Sbjct: 20 LLPDAA 25
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 LLPDAA 8
LLPDAA
Sbjct: 20 LLPDAA 25
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 LLPDAA 8
LLPDAA
Sbjct: 20 LLPDAA 25
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 LLPDAA 8
LLPDAA
Sbjct: 20 LLPDAA 25
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 LLPDAA 8
LLPDAA
Sbjct: 20 LLPDAA 25
>sp|VE2_HPV22|REGULATORY protein E2|Human papillomavirus 22
Query: 1 GGLLPDAAAA 10
GG+ PD A
Sbjct: 321 GGVAPDEVGA 330
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 1 GGLLPDAA 8
GG+LP+++
Sbjct: 324 GGVLPNSS 331
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 1 GGLLPDA 7
GGLLP A
Sbjct: 865 GGLLPSA 871
8|SequenceR|45|36|KAPGQGGLLP
>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PGQGGLLP 10
PG GLLP
Sbjct: 210 PGTSGLLP 217
>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PGQGGLLP 10
PG GLLP
Sbjct: 210 PGTSGLLP 217
>sp|CEP2_HHV7J|CYTOPLASMIC envelopment protein 2|Human herpesvirus 7 (strain JI)
Query: 1 KAPGQGGLLP 10
K PG+ L+P
Sbjct: 151 KGPGENKLIP 160
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 3 PGQGGLLP 10
P GG+LP
Sbjct: 321 PAYGGVLP 328
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 3 PGQGGLLP 10
P GG+LP
Sbjct: 321 PAYGGVLP 328
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 3 PGQGGLLP 10
P GG+LP
Sbjct: 321 PAYGGVLP 328
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 KAPGQGGLL 9
KA G GG+L
Sbjct: 3814 KAEGDGGVL 3822
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 KAPGQGGLL 9
KA G GG+L
Sbjct: 3814 KAEGDGGVL 3822
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 3 PGQGGLLP 10
P GG+LP
Sbjct: 321 PAYGGVLP 328
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 3 PGQGGLLP 10
P GG+LP
Sbjct: 321 PAYGGVLP 328
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 KAPGQG 6
KAPG+G
Sbjct: 365 KAPGRG 370
>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 KAPGQGGLLP 10
+AP GLLP
Sbjct: 227 QAPWHTGLLP 236
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 4 GQGGLLP 10
G GGLLP
Sbjct: 863 GDGGLLP 869
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 APGQGGLLP 10
+P GG LP
Sbjct: 6 SPRAGGFLP 14
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 PGQGGLL 9
PG GG+L
Sbjct: 858 PGCGGIL 864
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 PGQGGLL 9
PG GG+L
Sbjct: 858 PGCGGIL 864
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 1 KAPGQGGLL 9
+ PG GG L
Sbjct: 144 QVPGPGGCL 152
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 KAPGQGGLLP 10
K PG +LP
Sbjct: 298 KRPGNKSVLP 307
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 6 GGLLP 10
GGLLP
Sbjct: 329 GGLLP 333
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 6 GGLLP 10
GGLLP
Sbjct: 329 GGLLP 333
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 PGQGGL 8
PG GGL
Sbjct: 3083 PGPGGL 3088
9|SequenceR|50|41|DKECDKAPGQ
>sp|PG053_VARV|EFC-ASSOCIATED protein OPG053|Variola virus
Query: 3 ECDKAPGQ 10
EC PGQ
Sbjct: 126 ECSAPPGQ 133
>sp|PG053_VAR67|EFC-ASSOCIATED protein OPG053|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 ECDKAPGQ 10
EC PGQ
Sbjct: 126 ECSAPPGQ 133
>sp|PG053_VACCP|EFC-ASSOCIATED protein OPG053|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 ECDKAPGQ 10
EC PGQ
Sbjct: 126 ECSAPPGQ 133
>sp|PG053_VACCC|EFC-ASSOCIATED protein OPG053|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 ECDKAPGQ 10
EC PGQ
Sbjct: 126 ECSAPPGQ 133
>sp|PG053_MONPV|EFC-ASSOCIATED protein OPG053|Monkeypox virus (MPXV)
Query: 3 ECDKAPGQ 10
EC PGQ
Sbjct: 126 ECSAPPGQ 133
>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain
Query: 3 ECDKAPG 9
+CD PG
Sbjct: 643 QCDHVPG 649
>sp|UL24_HHV6G|PROTEIN UL24 homolog|Human herpesvirus 6A (strain GS)
Query: 2 KECDKAP 8
K C KAP
Sbjct: 207 KRCRKAP 213
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 2 KECDKAPG 9
K C +APG
Sbjct: 1064 KSCIRAPG 1071
>sp|UL24_HHV6U|PROTEIN UL24 homolog|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 KECDKAP 8
K C KAP
Sbjct: 207 KRCRKAP 213
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 KECDKAPGQ 10
+ CD P Q
Sbjct: 493 RPCDTVPAQ 501
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 1 DKECDKAPG 9
D+ECD+ G
Sbjct: 60 DEECDRVYG 68
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 2 KECDKAPGQ 10
K CD AP +
Sbjct: 176 KPCDPAPAK 184
>sp|NSP1B_ROTGI|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate RVB/Rat/United
Query: 2 KECDKAPG 9
KEC + PG
Sbjct: 48 KECPEIPG 55
>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate
Query: 2 KECDKAPG 9
+EC + PG
Sbjct: 48 RECPEMPG 55
>sp|PG147_VACCC|VIRION membrane protein OPG147|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DKECDKAPG 9
DK+ D PG
Sbjct: 93 DKDRDDIPG 101
>sp|A21_VACCA|VIRION membrane protein A21|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DKECDKAPG 9
DK+ D PG
Sbjct: 93 DKDRDDIPG 101
>sp|PG147_VARV|VIRION membrane protein OPG147|Variola virus
Query: 1 DKECDKAPG 9
DK+ D PG
Sbjct: 93 DKDRDDIPG 101
>sp|PG147_VAR67|VIRION membrane protein OPG147|Variola virus (isolate
Query: 1 DKECDKAPG 9
DK+ D PG
Sbjct: 93 DKDRDDIPG 101
>sp|PG147_MONPV|VIRION membrane protein OPG147|Monkeypox virus (MPXV)
Query: 1 DKECDKAPG 9
DK+ D PG
Sbjct: 91 DKDRDDIPG 99
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 2 KECDKA 7
K CDKA
Sbjct: 1008 KACDKA 1013
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 2 KECDKA 7
K CDKA
Sbjct: 1008 KACDKA 1013
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 2 KECDKA 7
K CDKA
Sbjct: 1007 KACDKA 1012
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 3 ECDKAP 8
E DKAP
Sbjct: 590 EADKAP 595
10|SequenceR|55|46|RCQFQDKECD
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CQFQDK 7
CQF+DK
Sbjct: 1088 CQFKDK 1093
Query: 2 CQFQDKEC 9
C + DK C
Sbjct: 602 CDYADKLC 609
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CQFQDK 7
CQF+DK
Sbjct: 1088 CQFKDK 1093
Query: 2 CQFQDKEC 9
C + DK C
Sbjct: 602 CDYADKLC 609
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 CQFQDKECD 10
C+FQ+K+ D
Sbjct: 4446 CRFQEKDED 4454
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 CQFQDKE 8
C+FQ+K+
Sbjct: 4423 CRFQEKD 4429
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 3 QFQDKECD 10
+ +DK+CD
Sbjct: 414 EIKDKKCD 421
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 3 QFQDKECD 10
+ +DK+CD
Sbjct: 414 EIKDKKCD 421
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 3 QFQDKECD 10
+ +DK+CD
Sbjct: 414 EIKDKKCD 421
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 3 QFQDKECD 10
+ +DK+CD
Sbjct: 414 EIKDKKCD 421
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 3 QFQDKECD 10
+ +DK+CD
Sbjct: 413 EIKDKKCD 420
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 3 QFQDKECD 10
+ +DK+CD
Sbjct: 413 EIKDKKCD 420
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 3 QFQDKECD 10
+ +DK+CD
Sbjct: 414 EIKDKKCD 421
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 3 QFQDKECD 10
+ +DK+CD
Sbjct: 414 EIKDKKCD 421
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 3 QFQDKECD 10
+ +DK+CD
Sbjct: 413 EIKDKKCD 420
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 3 QFQDKECD 10
+ +DK+CD
Sbjct: 413 EIKDKKCD 420
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 3 QFQDKECD 10
+ +DK+CD
Sbjct: 414 EIKDKKCD 421
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 3 QFQDKECD 10
+ +DK+CD
Sbjct: 413 EIKDKKCD 420
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 FQDKECD 10
F D +CD
Sbjct: 6007 FDDSDCD 6013
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 CQFQDKE 8
C + DKE
Sbjct: 1096 CNYMDKE 1102
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 CQFQDKE 8
C + DKE
Sbjct: 1096 CNYMDKE 1102
11|SequenceR|60|51|ICRENRCQFQ
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 ICRENRCQF 9
+ +ENRC F
Sbjct: 1798 LAKENRCAF 1806
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 ICRENRCQF 9
+ R+N CQF
Sbjct: 922 LVRKNNCQF 930
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 ICRENRCQF 9
+ R+N CQF
Sbjct: 922 LVRKNNCQF 930
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 1 ICRENRCQFQ 10
+C E+ CQ Q
Sbjct: 618 LCEESTCQEQ 627
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 CRENRCQ 8
CR+N C+
Sbjct: 55 CRKNSCE 61
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 CRENRCQ 8
CRE CQ
Sbjct: 534 CREAYCQ 540
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 2 CRENRC 7
CR +RC
Sbjct: 310 CRPDRC 315
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 ICRENRC 7
+ +ENRC
Sbjct: 1799 LAKENRC 1805
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 ICRENRC 7
+ +ENRC
Sbjct: 1800 LAKENRC 1806
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 ICRENRC 7
+ +ENRC
Sbjct: 1800 LAKENRC 1806
>sp|UL56_HHV1E|PROTEIN UL56|Human herpesvirus 1 (strain HFEM)
Query: 2 CRENRC 7
CR +RC
Sbjct: 130 CRASRC 135
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 ICRENRCQF 9
+CRE+R F
Sbjct: 113 LCRESRELF 121
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 4 ENRCQF 9
+NRC+F
Sbjct: 340 KNRCRF 345
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 4 ENRCQF 9
+NRC+F
Sbjct: 330 KNRCRF 335
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 4 ENRCQF 9
+NRC+F
Sbjct: 340 KNRCRF 345
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 ICRENRCQF 9
+C+ N C++
Sbjct: 163 VCQYNMCEY 171
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 ICRENRCQFQ 10
+CR + QF+
Sbjct: 263 VCRHLKLQFR 272
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ICRENRCQFQ 10
+CR + QF+
Sbjct: 263 VCRHLKLQFR 272
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 ICRENRCQF 9
+ R+N C F
Sbjct: 962 LVRKNNCAF 970
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 ICRENRCQF 9
+ R+N C F
Sbjct: 962 LVRKNNCAF 970
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 ICRENRCQF 9
+ R+N C F
Sbjct: 957 LVRKNNCAF 965
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 ICRENRCQF 9
+ R+N C F
Sbjct: 957 LVRKNNCAF 965
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 ICRENRCQF 9
+ R+N C F
Sbjct: 957 LVRKNNCAF 965
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 ICRENRCQF 9
+ R+N C F
Sbjct: 957 LVRKNNCAF 965
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 ICRENRCQF 9
+C+E+R F
Sbjct: 382 VCQEHRQDF 390
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ICRENRCQF 9
+C+E+R F
Sbjct: 382 VCQEHRQDF 390
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 ICRENRCQF 9
+C+E+R F
Sbjct: 382 VCQEHRQDF 390
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CRENRCQFQ 10
C ++ C F+
Sbjct: 392 CEQDSCDFK 400
>sp|M21_HRSV|PROTEIN M2-1|Human respiratory syncytial virus
Query: 1 ICRENRCQFQ 10
+ R N C+F+
Sbjct: 1 MSRRNPCKFE 10
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CRENRCQFQ 10
C ++ C F+
Sbjct: 392 CEQDSCDFK 400
Query: 2 CRENRC 7
C+++RC
Sbjct: 4666 CQDDRC 4671
>sp|M21_HRSVA|PROTEIN M2-1|Human respiratory syncytial virus A
Query: 1 ICRENRCQFQ 10
+ R N C+F+
Sbjct: 1 MSRRNPCKFE 10
>sp|M21_HRSVB|PROTEIN M2-1|Human respiratory syncytial virus B
Query: 1 ICRENRCQFQ 10
+ R N C+F+
Sbjct: 1 MSRRNPCKFE 10
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 1 ICRENRC 7
IC +N C
Sbjct: 114 ICDDNSC 120
12|SequenceR|65|56|RWVSPICREN
>sp|NSP6_ROTH7|NON-STRUCTURAL protein 6|Rotavirus A (isolate RVA/Human/United
Query: 1 RWVSPICRE 9
+W+SP+ +E
Sbjct: 88 KWISPLIKE 96
>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)
Query: 1 RWVSPIC 7
+W++P+C
Sbjct: 47 KWLNPVC 53
>sp|PHOSP_VSNJO|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 2 WVSPICREN 10
W P+ +EN
Sbjct: 103 WTQPVMKEN 111
>sp|PHOSP_VSNJM|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 2 WVSPICREN 10
W P+ +EN
Sbjct: 103 WTQPVMKEN 111
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 2 WVSPICREN 10
W SP+C+ +
Sbjct: 812 WASPVCQRH 820
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 2 WVSPICREN 10
W SP+C+ +
Sbjct: 812 WASPVCQRH 820
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 2 WVSPICREN 10
W SP+C+ +
Sbjct: 812 WASPVCQRH 820
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 WVSPICREN 10
W SP+C+ +
Sbjct: 812 WASPVCQRH 820
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 2 WVSPICREN 10
W SP+C+ +
Sbjct: 812 WASPVCQRH 820
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 2 WVSPICREN 10
W SP+C+ +
Sbjct: 812 WASPVCQRH 820
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 2 WVSPICREN 10
W SP+C+ +
Sbjct: 812 WASPVCQRH 820
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 2 WVSPICREN 10
W SP+C+ +
Sbjct: 812 WASPVCQRH 820
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 2 WVSPICREN 10
W SP+C+ +
Sbjct: 812 WASPVCQRH 820
>sp|NSP6_ROT41|NON-STRUCTURAL protein 6|Rotavirus A (isolate
Query: 1 RWVSPICRE 9
+W+SP+ ++
Sbjct: 88 KWISPLTKQ 96
>sp|VPAP_HHV6Z|DNA polymerase processivity factor|Human herpesvirus 6B (strain Z29)
Query: 1 RWVSPICR 8
+W+SP+ +
Sbjct: 173 KWLSPVTK 180
>sp|VPAP_HHV6G|DNA polymerase processivity factor|Human herpesvirus 6A (strain GS)
Query: 1 RWVSPICR 8
+W+SP+ +
Sbjct: 193 KWLSPVTK 200
>sp|VPAP_HHV6U|DNA polymerase processivity factor|Human herpesvirus 6A (strain
Query: 1 RWVSPICR 8
+W+SP+ +
Sbjct: 198 KWLSPVTK 205
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 2 WVSPICRE 9
W+S C+E
Sbjct: 370 WISKCCKE 377
>sp|VE7_HPV23|PROTEIN E7|Human papillomavirus 23
Query: 1 RWVSPICREN 10
+ V P CRE+
Sbjct: 82 KLVCPACRED 91
>sp|UL49_HHV7J|PROTEIN U33|Human herpesvirus 7 (strain JI)
Query: 1 RWVSPICR 8
R +SP+C+
Sbjct: 10 RLISPLCK 17
>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus
Query: 1 RWVSPIC 7
+W++P C
Sbjct: 50 KWLNPTC 56
>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate
Query: 1 RWVSPIC 7
+W++P C
Sbjct: 50 KWLNPTC 56
>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 RWVSPIC 7
RW +P+C
Sbjct: 249 RWCNPMC 255
>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 RWVSPIC 7
RW +P+C
Sbjct: 249 RWCNPMC 255
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 1 RWVSPIC 7
RW +P+C
Sbjct: 249 RWCNPMC 255
>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)
Query: 1 RWVSPIC 7
RW +P+C
Sbjct: 249 RWCNPMC 255
>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)
Query: 1 RWVSPIC 7
RW +P+C
Sbjct: 249 RWCNPMC 255
>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 RWVSPIC 7
RW +P+C
Sbjct: 249 RWCNPMC 255
>sp|VE7_HPV38|PROTEIN E7|Human papillomavirus 38
Query: 1 RWVSPICREN 10
R + P CRE+
Sbjct: 85 RLLCPTCRED 94
>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 1 RWVSPIC 7
+W++P C
Sbjct: 47 KWLNPAC 53
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 2 WVSPIC 7
W+ P+C
Sbjct: 507 WLQPLC 512
>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 1 RWVSPIC 7
+W++P C
Sbjct: 49 KWLNPAC 55
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 2 WVSPIC 7
W+ P+C
Sbjct: 504 WLQPLC 509
>sp|GPX_MCV1|GLUTATHIONE peroxidase|Molluscum contagiosum virus subtype 1
Query: 4 SPICREN 10
SP+CR +
Sbjct: 168 SPVCRND 174
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 2 WVSPICRE 9
W+ CRE
Sbjct: 537 WIHQHCRE 544
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 VSPICRE 9
+SP+C E
Sbjct: 313 ISPMCAE 319
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 VSPICRE 9
+SP+C E
Sbjct: 315 ISPMCAE 321
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 VSPICRE 9
+SP+C E
Sbjct: 315 ISPMCAE 321
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 VSPICRE 9
+SP+C E
Sbjct: 315 ISPMCAE 321
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 WVSPICRE 9
W+ +C+E
Sbjct: 936 WIHALCQE 943
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 2 WVSPICRE 9
W+ +C+E
Sbjct: 936 WIHSLCQE 943
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 WVSPICRE 9
W+ +C+E
Sbjct: 936 WIHALCQE 943
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 WVSPIC 7
WV+P C
Sbjct: 607 WVTPRC 612
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 WVSPICRE 9
W+ +C+E
Sbjct: 936 WIHALCQE 943
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 2 WVSPICREN 10
WV+ IC N
Sbjct: 238 WVAAICGVN 246
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 WVSPIC 7
WV+P C
Sbjct: 606 WVTPRC 611
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 WVSPICRE 9
W+ +C+E
Sbjct: 936 WIHALCQE 943
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 WVSPICRE 9
W+ +C+E
Sbjct: 936 WIHALCQE 943
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 WVSPICRE 9
W+ +C+E
Sbjct: 937 WIHSLCQE 944
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 WVSPIC 7
W+S IC
Sbjct: 55 WISMIC 60
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 WVSPICRE 9
W+ +C+E
Sbjct: 936 WIHALCQE 943
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 WVSPICRE 9
W+ +C+E
Sbjct: 936 WIHALCQE 943
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 2 WVSPICRE 9
W+ +C+E
Sbjct: 937 WIHALCQE 944
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 3 VSPICREN 10
V +CR+N
Sbjct: 19 VPSVCRQN 26
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 VSPICREN 10
V +CR+N
Sbjct: 19 VPSVCRQN 26
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 WVSPICRE 9
W+ +C+E
Sbjct: 936 WIHALCQE 943
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 WVSPICRE 9
W+ +C+E
Sbjct: 936 WIHALCQE 943
>sp|ICP27_EBVG|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 SPICRE 9
SP+CR+
Sbjct: 105 SPLCRD 110
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 WVSPIC 7
W++P C
Sbjct: 602 WITPRC 607
>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)
Query: 4 SPICRE 9
SP+CR+
Sbjct: 105 SPLCRD 110
>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)
Query: 4 SPICRE 9
SP+CR+
Sbjct: 105 SPLCRD 110
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 WVSPIC 7
WV+ +C
Sbjct: 1702 WVNAVC 1707
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 WVSPIC 7
WV+ +C
Sbjct: 1702 WVNAVC 1707
>sp|VCYCL_HHV8P|VIRAL cyclin homolog|Human herpesvirus 8 type P
Query: 2 WVSPICRE 9
W+ +C+E
Sbjct: 57 WMFSVCQE 64
>sp|VIF_HV1MN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 VSPIC 7
VSPIC
Sbjct: 129 VSPIC 133
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WVSPIC 7
W++P C
Sbjct: 602 WITPRC 607
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 WVSPIC 7
W++P C
Sbjct: 602 WITPRC 607
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 1 RWVSPICRE 9
+W++ IC +
Sbjct: 406 QWITHICSK 414
13|SequenceR|70|61|DDEDCRWVSP
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 DDEDCRW 7
DDE CR+
Sbjct: 137 DDESCRY 143
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 DDEDCRW 7
DDE CR+
Sbjct: 137 DDESCRY 143
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 DDEDCRW 7
DDE CR+
Sbjct: 137 DDESCRY 143
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DEDCRW 7
D DC+W
Sbjct: 1959 DPDCQW 1964
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 DDEDCRW 7
DDE CR+
Sbjct: 137 DDETCRF 143
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 1 DDEDCRWV 8
DDE RW+
Sbjct: 278 DDELARWL 285
>sp|CEP1_HHV8P|CYTOPLASMIC envelopment protein 1|Human herpesvirus 8 type P
Query: 3 EDCRWVSP 10
E+CR +SP
Sbjct: 133 ENCRDMSP 140
>sp|UL76_HCMVA|PROTEIN UL76|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DDEDCRW 7
DD+ RW
Sbjct: 110 DDQSVRW 116
>sp|UL76_HCMVM|PROTEIN UL76|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DDEDCRW 7
DD+ RW
Sbjct: 110 DDQSVRW 116
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 2 DEDCRWVS 9
D DC W++
Sbjct: 369 DFDCEWIN 376
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 2 DEDCRW 7
++DC W
Sbjct: 460 NQDCNW 465
>sp|NSP6_ROTHW|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/United
Query: 6 RWVSP 10
+W+SP
Sbjct: 88 KWISP 92
>sp|NSP6_ROTHK|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 6 RWVSP 10
+W+SP
Sbjct: 88 KWISP 92
>sp|NSP6_ROTHD|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/United
Query: 6 RWVSP 10
+W+SP
Sbjct: 88 KWISP 92
>sp|NSP6_ROTHB|NON-STRUCTURAL protein 6|Rotavirus A (strain
Query: 6 RWVSP 10
+W+SP
Sbjct: 88 KWISP 92
>sp|NSP6_ROTH7|NON-STRUCTURAL protein 6|Rotavirus A (isolate RVA/Human/United
Query: 6 RWVSP 10
+W+SP
Sbjct: 88 KWISP 92
>sp|NSP6_ROTH6|NON-STRUCTURAL protein 6|Rotavirus A (strain
Query: 6 RWVSP 10
+W+SP
Sbjct: 88 KWISP 92
>sp|NSP6_ROT41|NON-STRUCTURAL protein 6|Rotavirus A (isolate
Query: 6 RWVSP 10
+W+SP
Sbjct: 88 KWISP 92
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 4 DCRWVS 9
DC WV+
Sbjct: 375 DCEWVN 380
>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 4 DCRWVS 9
DC+W S
Sbjct: 62 DCQWCS 67
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 4 DCRWVS 9
DC+W S
Sbjct: 62 DCQWCS 67
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 DEDCRWVS 9
DE RW S
Sbjct: 2926 DEQNRWAS 2933
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 DEDCRWVS 9
DE RW S
Sbjct: 2926 DEQNRWAS 2933
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 DEDCRWVS 9
DE RW S
Sbjct: 2926 DEQNRWAS 2933
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 DEDCRWVS 9
DE RW S
Sbjct: 2926 DEQNRWAS 2933
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 DDEDC 5
DD DC
Sbjct: 6008 DDSDC 6012
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 DDEDC 5
+DEDC
Sbjct: 1956 NDEDC 1960
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 DEDCRWV 8
+ DC W+
Sbjct: 812 ESDCNWL 818
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 DDEDC 5
+DEDC
Sbjct: 1956 NDEDC 1960
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 DDEDC 5
+DEDC
Sbjct: 1956 NDEDC 1960
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 DDEDC 5
+DEDC
Sbjct: 1956 NDEDC 1960
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 DDEDC 5
+DEDC
Sbjct: 1956 NDEDC 1960
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 DDEDC 5
+DEDC
Sbjct: 1956 NDEDC 1960
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 DDEDC 5
+DEDC
Sbjct: 1956 NDEDC 1960
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 DDEDC 5
+DEDC
Sbjct: 1546 NDEDC 1550
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 2 DEDCRW 7
DED RW
Sbjct: 183 DEDGRW 188
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 2 DEDCRW 7
DED RW
Sbjct: 183 DEDGRW 188
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 4 DCRWVS 9
DC W++
Sbjct: 372 DCEWIN 377
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 2 DEDCRW 7
DED RW
Sbjct: 183 DEDGRW 188
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 DEDCRW 7
DED RW
Sbjct: 183 DEDGRW 188
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 2 DEDCRW 7
DED RW
Sbjct: 183 DEDGRW 188
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 2 DEDCRW 7
DED RW
Sbjct: 183 DEDGRW 188
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 2 DEDCRW 7
DED RW
Sbjct: 183 DEDGRW 188
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 2 DEDCRW 7
DED RW
Sbjct: 183 DEDGRW 188
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 2 DEDCRW 7
DED RW
Sbjct: 183 DEDGRW 188
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 3 EDCRWVSP 10
+C W +P
Sbjct: 278 RECHWTAP 285
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 3 EDCRWVSP 10
+C W +P
Sbjct: 278 RECHWTAP 285
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 3 EDCRWVSP 10
+C W +P
Sbjct: 278 RECHWTAP 285
>sp|DNLI_VARV|DNA ligase|Variola virus
Query: 1 DDEDCRW 7
DDE +W
Sbjct: 439 DDESGKW 445
>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 DDEDCRW 7
DDE +W
Sbjct: 439 DDESGKW 445
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 4 DCRWVS 9
DC W++
Sbjct: 372 DCEWIN 377
14|SequenceR|75|66|HDLCDDDEDC
>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P
Query: 1 HDLCDDDEDC 10
H+L DDE C
Sbjct: 97 HNLAVDDEGC 106
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 4 CDDDEDC 10
CD D DC
Sbjct: 293 CDGDRDC 299
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 LCDDDED 9
LC+ DED
Sbjct: 1592 LCESDED 1598
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 LCDDDED 9
LC+ DED
Sbjct: 1592 LCESDED 1598
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 LCDDDED 9
LC+ DED
Sbjct: 1592 LCESDED 1598
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 5 DDDEDC 10
D+DEDC
Sbjct: 37 DEDEDC 42
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HDLCDDDEDC 10
HDL D DC
Sbjct: 884 HDLLDVAPDC 893
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HDLCDDDEDC 10
HDL D DC
Sbjct: 884 HDLLDVAPDC 893
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 DLCDDDE 8
+LCDD E
Sbjct: 3586 NLCDDPE 3592
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 DLCDDDE 8
+LCDD E
Sbjct: 3561 NLCDDPE 3567
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 4 CDDDE 8
CDDD+
Sbjct: 1969 CDDDD 1973
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 4 CDDDE 8
CDDD+
Sbjct: 1969 CDDDD 1973
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 4 CDDDE 8
CDDD+
Sbjct: 1969 CDDDD 1973
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 4 CDDDE 8
CDDD+
Sbjct: 1970 CDDDD 1974
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 4 CDDDE 8
CDDD+
Sbjct: 1969 CDDDD 1973
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 4 CDDDE 8
CDDD+
Sbjct: 1969 CDDDD 1973
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 4 CDDDE 8
CDDD+
Sbjct: 1969 CDDDD 1973
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 4 CDDDE 8
CDDD+
Sbjct: 1969 CDDDD 1973
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 4 CDDDE 8
CDDD+
Sbjct: 1971 CDDDD 1975
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 4 CDDDE 8
CDDD+
Sbjct: 1971 CDDDD 1975
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 DLCDDDE 8
+LCDD E
Sbjct: 3586 NLCDDPE 3592
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 DLCDDDE 8
+LCDD E
Sbjct: 3561 NLCDDPE 3567
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 3 LCDDDE 8
LC+DD+
Sbjct: 70 LCEDDD 75
>sp|TR14_HCMVA|PROTEIN TRL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HDLCDDDED 9
HD+C D D
Sbjct: 57 HDICFDCND 65
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 LCDDDE 8
+C DDE
Sbjct: 919 MCQDDE 924
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 LCDDDE 8
+C DDE
Sbjct: 928 MCQDDE 933
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 LCDDDE 8
+C DDE
Sbjct: 909 MCQDDE 914
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 1 HDLCDDDEDC 10
HD C++ + C
Sbjct: 204 HDPCEEGKKC 213
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 3 LCDDDED 9
LC DD D
Sbjct: 461 LCRDDRD 467
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 1 HDLCDDDE 8
HD+ DD E
Sbjct: 353 HDITDDSE 360
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 HDLCDDDE 8
H LC++ E
Sbjct: 523 HSLCENGE 530
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 1 HDLCDDDE 8
HD+ DD E
Sbjct: 357 HDITDDSE 364
>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)
Query: 5 DDDEDC 10
D D+DC
Sbjct: 66 DPDDDC 71
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 2 DLCDDDED 9
DL +DDED
Sbjct: 614 DLHEDDED 621
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 CDDDED 9
CD DE+
Sbjct: 369 CDKDEE 374
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 5 DDDEDC 10
DD +DC
Sbjct: 2398 DDTQDC 2403
>sp|RIR2_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 8 type P
Query: 1 HDLCDDDED 9
H L D D+D
Sbjct: 43 HQLSDADKD 51
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 1 HDLCDDDEDC 10
H L + + DC
Sbjct: 446 HSLLETNNDC 455
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 HDLCDDDEDC 10
H L + + DC
Sbjct: 446 HSLLETNNDC 455
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 1 HDLCD 5
+DLCD
Sbjct: 658 YDLCD 662
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 1 HDLCD 5
+DLCD
Sbjct: 658 YDLCD 662
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LCDDDED 9
L DDD D
Sbjct: 1424 LSDDDND 1430
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 HDLCD 5
+DLCD
Sbjct: 650 YDLCD 654
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 1 HDLCD 5
+DLCD
Sbjct: 658 YDLCD 662
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 HDLCD 5
+DLCD
Sbjct: 658 YDLCD 662
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HDLCD 5
+DLCD
Sbjct: 658 YDLCD 662
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 1 HDLCD 5
+DLCD
Sbjct: 658 YDLCD 662
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 1 HDLCD 5
+DLCD
Sbjct: 658 YDLCD 662
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 1 HDLCD 5
+DLCD
Sbjct: 658 YDLCD 662
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 HDLCDDDED 9
+ LC+ +ED
Sbjct: 939 YGLCETEED 947
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 DDDEDC 10
D D DC
Sbjct: 1711 DSDSDC 1716
>sp|UL49_HHV6U|PROTEIN U33|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DLCDDDEDC 10
+ C D EDC
Sbjct: 446 ETCLDLEDC 454
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 DDDEDC 10
D D DC
Sbjct: 1712 DSDSDC 1717
>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)
Query: 2 DLCDDDEDC 10
+ C D EDC
Sbjct: 446 ETCLDLEDC 454
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DLCDDDED 9
D C DDE+
Sbjct: 43 DDCRDDEE 50
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 4 CDDDEDC 10
CD + DC
Sbjct: 272 CDIEVDC 278
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 4 CDDDEDC 10
CD + DC
Sbjct: 272 CDIEVDC 278
15|SequenceR|80|71|DDEDSHDLCD
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 EDSHDLCD 10
+D+H LCD
Sbjct: 459 QDTHFLCD 466
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 3 EDSHDLCD 10
+D+H LCD
Sbjct: 459 QDTHFLCD 466
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 DEDSHDLCD 10
+ED HDL +
Sbjct: 1978 NEDDHDLAN 1986
>sp|NCAP_BUNLC|NUCLEOPROTEIN La Crosse
Query: 1 DDEDSHDL 8
DDE H+L
Sbjct: 111 DDESQHEL 118
>sp|NCAP_BUNL8|NUCLEOPROTEIN La Crosse (isolate Human/United
Query: 1 DDEDSHDL 8
DDE H+L
Sbjct: 111 DDESQHEL 118
>sp|PAP1_YMTV5|POLY(A) polymerase catalytic subunit|Yaba monkey tumor virus (strain
Query: 1 DDEDSH 6
DDED H
Sbjct: 235 DDEDKH 240
>sp|US13_HCMVM|MEMBRANE protein US13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 DSHDLC 9
DSH++C
Sbjct: 59 DSHNIC 64
>sp|US13_HCMVA|UNCHARACTERIZED protein HVLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 DSHDLC 9
DSH++C
Sbjct: 59 DSHNIC 64
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 DSHDLCD 10
D H++CD
Sbjct: 299 DHHNVCD 305
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 DSHDLCD 10
D H++CD
Sbjct: 299 DHHNVCD 305
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 DSHDLCD 10
D H++CD
Sbjct: 299 DHHNVCD 305
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 DDEDSHDLCD 10
DDE +CD
Sbjct: 1024 DDEVKEQICD 1033
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DEDSHDLC 9
DED D C
Sbjct: 1289 DEDWSDFC 1296
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DEDSHDLC 9
DED D C
Sbjct: 1289 DEDWSDFC 1296
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 1 DDEDSHDLC 9
D+ D DLC
Sbjct: 688 DEVDRFDLC 696
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DEDSHDLC 9
DED D C
Sbjct: 1289 DEDWSDFC 1296
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DEDSHDLC 9
DED D C
Sbjct: 1289 DEDWSDFC 1296
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DEDSHDLC 9
DED D C
Sbjct: 1289 DEDWSDFC 1296
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DEDSHDLC 9
DED D C
Sbjct: 1289 DEDWSDFC 1296
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 DDEDSHDLCD 10
DDE +CD
Sbjct: 1032 DDEIKEQICD 1041
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 DDEDSHDLCD 10
DDE +CD
Sbjct: 1023 DDEIKEQICD 1032
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 1 DDEDSH 6
DDEDS+
Sbjct: 688 DDEDSN 693
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DEDSHDLC 9
DED D C
Sbjct: 1289 DEDWSDFC 1296
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DEDSHDLC 9
DED D C
Sbjct: 1289 DEDWSDFC 1296
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DEDSHDLC 9
DED D C
Sbjct: 1289 DEDWSDFC 1296
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DDEDSHDLCD 10
D D H LC+
Sbjct: 99 DHGDVHRLCE 108
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DDEDSHDLCD 10
D D H LC+
Sbjct: 99 DHGDVHRLCE 108
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 EDSHDLCD 10
E+S D CD
Sbjct: 967 EESTDECD 974
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 EDSHDLCD 10
E+S D CD
Sbjct: 967 EESTDECD 974
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 EDSHDLCD 10
E+S D CD
Sbjct: 967 EESTDECD 974
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 3 EDSHDLCD 10
E+S D CD
Sbjct: 895 EESTDECD 902
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 EDSHDLCD 10
E+S D CD
Sbjct: 967 EESTDECD 974
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 EDSHDLCD 10
E+S D CD
Sbjct: 967 EESTDECD 974
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 EDSHDLCD 10
E+S D CD
Sbjct: 967 EESTDECD 974
>sp|K1_HHV8P|PROTEIN K1|Human herpesvirus 8 type P
Query: 6 HDLC 9
HDLC
Sbjct: 265 HDLC 268
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 DDEDSHDLCD 10
++++SH CD
Sbjct: 193 NNDNSHVSCD 202
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DDEDSHDLCD 10
DDED+H + D
Sbjct: 439 DDEDNHVVPD 448
>sp|IR12_HCMVA|UNCHARACTERIZED protein IRL12|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 HDLC 9
HDLC
Sbjct: 269 HDLC 272
16|SequenceR|85|76|TKKPCDDEDS
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 KPCDDED 9
+ CDDED
Sbjct: 2265 RACDDED 2271
Query: 1 TKKPCDD 7
+KK CD+
Sbjct: 1401 SKKKCDE 1407
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 5 CDDEDS 10
CDD+DS
Sbjct: 1969 CDDDDS 1974
Query: 4 PCDDED 9
PC D+D
Sbjct: 3239 PCRDQD 3244
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 5 CDDEDS 10
CDD+DS
Sbjct: 1969 CDDDDS 1974
Query: 4 PCDDED 9
PC D+D
Sbjct: 3237 PCRDQD 3242
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 5 CDDEDS 10
CDD+DS
Sbjct: 1969 CDDDDS 1974
Query: 4 PCDDED 9
PC D+D
Sbjct: 3239 PCRDQD 3244
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 5 CDDEDS 10
CDD+DS
Sbjct: 1970 CDDDDS 1975
Query: 4 PCDDED 9
PC D+D
Sbjct: 3240 PCRDQD 3245
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 5 CDDEDS 10
CDD+DS
Sbjct: 1969 CDDDDS 1974
Query: 4 PCDDED 9
PC D+D
Sbjct: 3239 PCRDQD 3244
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 5 CDDEDS 10
CDD+DS
Sbjct: 1969 CDDDDS 1974
Query: 4 PCDDED 9
PC D+D
Sbjct: 3239 PCRDQD 3244
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 5 CDDEDS 10
CDD+DS
Sbjct: 1969 CDDDDS 1974
Query: 4 PCDDED 9
PC D+D
Sbjct: 3239 PCRDQD 3244
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 5 CDDEDS 10
CDD+DS
Sbjct: 1969 CDDDDS 1974
Query: 4 PCDDED 9
PC D+D
Sbjct: 3239 PCRDQD 3244
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 2 KKPCDDEDS 10
+KPC EDS
Sbjct: 123 RKPCHVEDS 131
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 2 KKPCDDED 9
KKPC+D++
Sbjct: 1294 KKPCNDKN 1301
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 5 CDDEDS 10
CDD+D+
Sbjct: 1971 CDDDDT 1976
Query: 4 PCDDED 9
PC D+D
Sbjct: 3241 PCRDQD 3246
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 5 CDDEDS 10
CDD+D+
Sbjct: 1971 CDDDDT 1976
Query: 4 PCDDED 9
PC D+D
Sbjct: 3241 PCRDQD 3246
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 4 PCDDED 9
PC D+D
Sbjct: 3238 PCRDQD 3243
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 4 PCDDED 9
PC D+D
Sbjct: 3238 PCRDQD 3243
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 4 PCDDED 9
PC D+D
Sbjct: 3238 PCRDQD 3243
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 4 PCDDED 9
PC D+D
Sbjct: 3252 PCRDQD 3257
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 4 PCDDED 9
PC D+D
Sbjct: 3230 PCRDQD 3235
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 PCDD 7
PCDD
Sbjct: 346 PCDD 349
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 KPCDDE 8
K CDDE
Sbjct: 1367 KTCDDE 1372
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 KPCDDE 8
K CDDE
Sbjct: 1369 KTCDDE 1374
>sp|BVLF1_EBVB9|LATE gene expression regulator BVLF1|Epstein-Barr virus (strain B95-8)
Query: 2 KKPCDD 7
K PCD+
Sbjct: 242 KPPCDE 247
>sp|E321_ADE35|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 35
Query: 3 KPCD 6
KPCD
Sbjct: 54 KPCD 57
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 2 KKPCDDE 8
++PCD++
Sbjct: 391 RRPCDNQ 397
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 3 KPCDD 7
KPC D
Sbjct: 321 KPCSD 325
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 3 KPCDD 7
KPC D
Sbjct: 321 KPCSD 325
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 3 KPCDD 7
KPC D
Sbjct: 321 KPCSD 325
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 3 KPCDD 7
KPC D
Sbjct: 321 KPCSD 325
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 3 KPCDD 7
KPC D
Sbjct: 321 KPCSD 325
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 3 KPCDD 7
KPC D
Sbjct: 321 KPCSD 325
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 3 KPCDD 7
KPC D
Sbjct: 321 KPCSD 325
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 3 KPCDD 7
KPC D
Sbjct: 332 KPCSD 336
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 3 KPCDD 7
KPC D
Sbjct: 327 KPCSD 331
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 3 KPCDD 7
KPC D
Sbjct: 332 KPCSD 336
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 3 KPCDD 7
KPC D
Sbjct: 332 KPCSD 336
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 3 KPCDD 7
KPC D
Sbjct: 332 KPCSD 336
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 3 KPCDD 7
KPC D
Sbjct: 332 KPCSD 336
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 3 KPCDD 7
KPC D
Sbjct: 332 KPCSD 336
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 3 KPCDD 7
KPC D
Sbjct: 332 KPCSD 336
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 KKPCDDED 9
KKPC++++
Sbjct: 1280 KKPCNEKN 1287
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 1 TKKPCD 6
TKK CD
Sbjct: 417 TKKTCD 422
>sp|E321_ADE1P|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 11
Query: 3 KPCD 6
KPCD
Sbjct: 54 KPCD 57
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 TKKPCDDE 8
++K CD+E
Sbjct: 1375 SEKTCDEE 1382
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 6 DDEDS 10
DDEDS
Sbjct: 688 DDEDS 692
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 5 CDDED 9
CDD+D
Sbjct: 346 CDDQD 350
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 TKKPCDD 7
+KK CD+
Sbjct: 1400 SKKKCDE 1406
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TKKPCDD 7
+KK CD+
Sbjct: 1396 SKKKCDE 1402
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 TKKPCDD 7
+KK CD+
Sbjct: 1396 SKKKCDE 1402
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 TKKPCDD 7
+KK CD+
Sbjct: 1400 SKKKCDE 1406
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 TKKPCDD 7
+KK CD+
Sbjct: 1396 SKKKCDE 1402
>sp|E321_ADE1A|EARLY E3 20.2 kDa glycoprotein|Human adenovirus B serotype 11
Query: 3 KPCD 6
KPCD
Sbjct: 54 KPCD 57
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 TKKPCDD 7
+KK CD+
Sbjct: 1400 SKKKCDE 1406
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 TKKPCDD 7
+KK CD+
Sbjct: 1396 SKKKCDE 1402
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 TKKPCDD 7
+KK CD+
Sbjct: 1400 SKKKCDE 1406
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 TKKPCDD 7
+KK CD+
Sbjct: 1396 SKKKCDE 1402
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 TKKPCDD 7
+KK CD+
Sbjct: 1400 SKKKCDE 1406
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 TKKPCDD 7
+KK CD+
Sbjct: 1396 SKKKCDE 1402
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 TKKPCDD 7
+KK CD+
Sbjct: 1398 SKKKCDE 1404
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 TKKPCDD 7
+KK CD+
Sbjct: 1394 SKKKCDE 1400
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 TKKPCDD 7
+KK CD+
Sbjct: 1400 SKKKCDE 1406
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TKKPCDD 7
+KK CD+
Sbjct: 1396 SKKKCDE 1402
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TKKPCDD 7
+KK CD+
Sbjct: 1396 SKKKCDE 1402
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 TKKPCDD 7
+KK CD+
Sbjct: 1401 SKKKCDE 1407
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 3 KPCDD 7
KPC+D
Sbjct: 172 KPCND 176
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TKKPCDD 7
+KK CD+
Sbjct: 1396 SKKKCDE 1402
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TKKPCDD 7
+KK CD+
Sbjct: 1396 SKKKCDE 1402
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 TKKPCDD 7
+KK CD+
Sbjct: 1400 SKKKCDE 1406
17|SequenceR|90|81|DSDACTKKPC
>sp|VP7_ROTHB|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 3 DACTKKPC 10
D+CT K C
Sbjct: 189 DSCTDKVC 196
>sp|VP7_ROTHL|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 3 DACTKKPC 10
D+CT K C
Sbjct: 189 DSCTVKVC 196
>sp|PG035_VAR67|PROTEIN OPG035|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 DSDACT 6
DSD CT
Sbjct: 36 DSDVCT 41
>sp|VP7_ROTH9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 3 DACTKKPC 10
D+CT K C
Sbjct: 189 DSCTIKVC 196
>sp|VP7_ROTH6|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 3 DACTKKPC 10
D+CT K C
Sbjct: 189 DSCTIKVC 196
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 3 DACTKKPC 10
+AC + PC
Sbjct: 139 EACPQLPC 146
>sp|NCAP_CVHN1|NUCLEOPROTEIN coronavirus HKU1 (isolate N1)
Query: 1 DSDACTKKP 9
DSD+ + KP
Sbjct: 383 DSDSLSSKP 391
>sp|VP1_POVWU|MAJOR capsid protein VP1|WU polyomavirus (WUPyV)
Query: 4 ACTKKP 9
ACT KP
Sbjct: 2 ACTAKP 7
Query: 4 ACTKKP 9
ACT KP
Sbjct: 8 ACTAKP 13
>sp|RP35_VAR67|DNA-DIRECTED RNA polymerase 35 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 SDACTK 7
SDAC K
Sbjct: 292 SDACKK 297
>sp|RP35_VACCT|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 SDACTK 7
SDAC K
Sbjct: 292 SDACKK 297
>sp|RP35_VACCC|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SDACTK 7
SDAC K
Sbjct: 292 SDACKK 297
>sp|RP35_VACCA|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 SDACTK 7
SDAC K
Sbjct: 292 SDACKK 297
>sp|RP35_MONPV|DNA-DIRECTED RNA polymerase 35 kDa|Monkeypox virus (MPXV)
Query: 2 SDACTK 7
SDAC K
Sbjct: 292 SDACKK 297
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 DSDACTKKP 9
DS++C+ P
Sbjct: 2392 DSESCSSMP 2400
>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)
Query: 4 ACTKKP 9
AC +KP
Sbjct: 480 ACVRKP 485
18|SequenceR|95|86|NDCTFDSDAC
>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /
Query: 3 CTFDSDAC 10
C +DSD C
Sbjct: 190 CMYDSDMC 197
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 1 NDCTFDS-DAC 10
N CTFD+ AC
Sbjct: 500 NLCTFDTRHAC 510
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 1 NDCTFDS-DAC 10
N CTFD+ AC
Sbjct: 500 NLCTFDTRHAC 510
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 NDCTFDS-DAC 10
N CTFD+ AC
Sbjct: 500 NLCTFDTRHAC 510
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 1 NDCTFD 6
NDCTF+
Sbjct: 351 NDCTFE 356
>sp|TRX2_HHV2H|TRIPLEX capsid protein 2|Human herpesvirus 2 (strain HG52)
Query: 3 CTFDSDA 9
CTFD A
Sbjct: 298 CTFDGAA 304
>sp|TRX2_HHV11|TRIPLEX capsid protein 2|Human herpesvirus 1 (strain 17)
Query: 3 CTFDSDA 9
CTFD A
Sbjct: 298 CTFDGAA 304
>sp|VC17_VACCC|ANKYRIN repeat protein C17/B23|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 CTFDSDAC 10
C ++SD C
Sbjct: 204 CMYNSDMC 211
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 2 DCTFDSDA 9
+C F+SD
Sbjct: 782 ECRFESDG 789
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 2 DCTFDSDA 9
+C F+SD
Sbjct: 782 ECRFESDG 789
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DCTFD 6
DC FD
Sbjct: 647 DCVFD 651
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DCTFD 6
DC FD
Sbjct: 647 DCVFD 651
>sp|ICP22_VZVO|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 DCTFDSDAC 10
DC D D C
Sbjct: 212 DCYRDGDGC 220
>sp|ICP22_VZVD|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Dumas)
Query: 2 DCTFDSDAC 10
DC D D C
Sbjct: 212 DCYRDGDGC 220
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 DCTFD 6
DC FD
Sbjct: 1009 DCVFD 1013
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 DCTFD 6
DC FD
Sbjct: 1009 DCVFD 1013
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 DCTFD 6
DC FD
Sbjct: 1009 DCVFD 1013
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 1 NDCTFDSDAC 10
N +DSD+C
Sbjct: 231 NLSVWDSDSC 240
>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2
Query: 4 TFDSDA 9
TFD+DA
Sbjct: 212 TFDADA 217
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 1 NDCTFDSD 8
ND T DSD
Sbjct: 360 NDLTEDSD 367
>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1
Query: 4 TFDSDA 9
TFD+DA
Sbjct: 212 TFDADA 217
19|SequenceR|100|91|HICHGNDCTF
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 3 CHGNDCT 9
CHG DC+
Sbjct: 1046 CHGEDCS 1052
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 3 CHGNDCT 9
CHG DC+
Sbjct: 1046 CHGEDCS 1052
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 3 CHGNDCT 9
CHG DC+
Sbjct: 1045 CHGEDCS 1051
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 3 CHGNDCT 9
CHG DC+
Sbjct: 1046 CHGTDCS 1052
>sp|PG050_MONPV|PROTEIN OPG050|Monkeypox virus (MPXV)
Query: 1 HICHGNDC 8
H+ HG DC
Sbjct: 43 HVNHGFDC 50
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 3 CHGNDCT 9
CH DCT
Sbjct: 1049 CHDTDCT 1055
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 3 CHGNDCT 9
CH DCT
Sbjct: 1051 CHDKDCT 1057
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 CHGNDCT 9
CH DCT
Sbjct: 1049 CHDTDCT 1055
>sp|VU84_HHV6Z|PROTEIN U84|Human herpesvirus 6B (strain Z29)
Query: 2 ICHGNDCTF 10
ICH N+ T
Sbjct: 299 ICHPNEITL 307
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 2 ICHGNDC 8
+CH N C
Sbjct: 506 LCHTNPC 512
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 ICHGND 7
+CHG D
Sbjct: 299 LCHGED 304
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 2 ICHGND 7
+CHG D
Sbjct: 299 LCHGED 304
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 2 ICHGND 7
+CHG D
Sbjct: 299 LCHGED 304
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 3 CHGNDCT 9
C GN CT
Sbjct: 562 CGGNSCT 568
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 3 CHGNDCTF 10
CHG +C+
Sbjct: 1044 CHGKECSL 1051
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 2 ICHGNDCTF 10
IC G D +F
Sbjct: 378 ICSGGDYSF 386
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 3 CHGNDCT 9
CHG +C+
Sbjct: 1045 CHGKECS 1051
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 3 CHGNDCT 9
CHG +C+
Sbjct: 1044 CHGKECS 1050
>sp|W_NIPAV|PROTEIN W|Nipah virus
Query: 4 HGNDCT 9
HG +CT
Sbjct: 119 HGGECT 124
>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 HGNDCT 9
HG +CT
Sbjct: 119 HGGECT 124
>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus
Query: 4 HGNDCT 9
HG +CT
Sbjct: 119 HGGECT 124
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 HGNDCT 9
HG +CT
Sbjct: 119 HGGECT 124
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 4 HGNDCT 9
HG +CT
Sbjct: 119 HGGECT 124
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 HGNDCT 9
HG +CT
Sbjct: 119 HGGECT 124
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 3 CHGNDCT 9
CHG +C+
Sbjct: 1044 CHGKECS 1050
>sp|PG050_VACCP|PROTEIN OPG050|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 HICHGNDC 8
H HG DC
Sbjct: 42 HANHGFDC 49
>sp|PG050_VACCC|PROTEIN OPG050|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HICHGNDC 8
H HG DC
Sbjct: 42 HANHGFDC 49
>sp|PG050_VACCA|PROTEIN OPG050|Vaccinia virus (strain Ankara) (VACV)
Query: 1 HICHGNDC 8
H HG DC
Sbjct: 42 HANHGFDC 49
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 ICHGNDC 8
+CH DC
Sbjct: 4616 MCHALDC 4622
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 CHGNDCT 9
CH D T
Sbjct: 1326 CHAQDAT 1332
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 CHGNDCT 9
CH D T
Sbjct: 1324 CHAQDAT 1330
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 CHGNDCT 9
CH D T
Sbjct: 1324 CHAQDAT 1330
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 CHGNDCT 9
CH D T
Sbjct: 1323 CHAQDAT 1329
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 ICHGNDCTF 10
+C G D +F
Sbjct: 379 VCSGGDYSF 387
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 ICHGNDCTF 10
+C G D +F
Sbjct: 379 VCSGGDYSF 387
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 CHGNDCT 9
CH DC+
Sbjct: 1048 CHDTDCS 1054
>sp|VP7_ROTKU|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 ICHGNDCT 9
I G DCT
Sbjct: 185 ISMGTDCT 192
>sp|VP7_ROTHS|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 ICHGNDCT 9
I G DCT
Sbjct: 185 ISMGTDCT 192
>sp|VP7_ROTHH|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 ICHGNDCT 9
I G DCT
Sbjct: 185 ISMGTDCT 192
>sp|VP7_ROTHD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 2 ICHGNDCT 9
I G DCT
Sbjct: 185 ISMGTDCT 192
>sp|VP7_ROTHA|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 ICHGNDCT 9
I G DCT
Sbjct: 185 ISMGTDCT 192
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 CHGNDCT 9
CH D T
Sbjct: 1319 CHSQDAT 1325
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 CHGNDCT 9
CH D T
Sbjct: 1319 CHSQDAT 1325
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 CHGNDCT 9
CH D T
Sbjct: 1318 CHSTDAT 1324
>sp|NSP2_ROTJ1|NON-STRUCTURAL protein 2|Rotavirus X (strain
Query: 1 HICHGN 6
H+C GN
Sbjct: 186 HLCIGN 191
>sp|NSP2_ROTB2|NON-STRUCTURAL protein 2|Rotavirus X (isolate
Query: 1 HICHGN 6
H+C GN
Sbjct: 186 HLCIGN 191
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CHGNDCT 9
CH D T
Sbjct: 1318 CHSTDAT 1324
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 CHGNDCT 9
CH D T
Sbjct: 1318 CHSTDAT 1324
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 HICHGNDCTF 10
I G DCT
Sbjct: 73 RILDGRDCTL 82
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 1 HICHGNDCTF 10
HIC +C
Sbjct: 111 HICVNTECVL 120
>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate
Query: 2 ICHGNDCTF 10
IC GN T+
Sbjct: 200 ICMGNTSTY 208
>sp|PAP_HHV8P|DNA polymerase processivity factor|Human herpesvirus 8 type P
Query: 4 HGNDCT 9
HG+ CT
Sbjct: 38 HGSACT 43
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 HICHGNDCTF 10
I G DCT
Sbjct: 57 KILDGRDCTL 66
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 HICHGNDCTF 10
I G DCT
Sbjct: 57 KILDGRDCTL 66
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 3 CHGNDC 8
C GN C
Sbjct: 1098 CGGNPC 1103
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 CHGNDC 8
C GN C
Sbjct: 211 CGGNPC 216
20|SequenceR|105|96|CKWREHICHG
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 1 CKWREHIC 8
C+W +HIC
Sbjct: 404 CQWIKHIC 411
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 3 WREHICHG 10
WR+ + HG
Sbjct: 509 WRQRLAHG 516
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 2 KWREHICH 9
KW HI H
Sbjct: 536 KWYPHILH 543
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 1 CKWREHICHG 10
CK + H+CH
Sbjct: 147 CKVQGHVCHA 156
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CKWREHICH 9
C++ + ICH
Sbjct: 169 CEYPQTICH 177
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 5 EHICH 9
+H+CH
Sbjct: 244 KHVCH 248
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 5 EHICH 9
+H+CH
Sbjct: 244 KHVCH 248
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 2 KWREHIC 8
KW +H+C
Sbjct: 78 KWEKHVC 84
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 WREHI 7
WR+H+
Sbjct: 1795 WRKHV 1799
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 2 KWREHICH 9
+W+ +CH
Sbjct: 131 EWKMELCH 138
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 3 WREHI 7
WR H+
Sbjct: 90 WRRHV 94
>sp|UL06_HCMVM|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 KWREHI 7
+WR H+
Sbjct: 266 RWRSHV 271
>sp|PG044_VACCC|PROTEIN K7|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 WREHI 7
WR H+
Sbjct: 36 WRNHV 40
>sp|PG044_VACCA|PROTEIN K7|Vaccinia virus (strain Ankara) (VACV)
Query: 3 WREHI 7
WR H+
Sbjct: 36 WRNHV 40
>sp|PG044_MONPV|PROTEIN K7|Monkeypox virus (MPXV)
Query: 3 WREHI 7
WR H+
Sbjct: 36 WRNHV 40
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 4 REHIC 8
+EH+C
Sbjct: 1103 KEHVC 1107
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 4 REHIC 8
+EH+C
Sbjct: 1094 KEHVC 1098
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 4 REHIC 8
+EH+C
Sbjct: 1095 KEHVC 1099
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 3 WREHICHG 10
W IC G
Sbjct: 217 WEMQICEG 224
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 KWREHICHG 10
K R+H HG
Sbjct: 1432 KTRDHQLHG 1440
>sp|ORF23_HHV8P|PROTEIN ORF23|Human herpesvirus 8 type P
Query: 4 REHICHG 10
R H+C G
Sbjct: 86 RSHLCVG 92
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CKWREHIC 8
CK ++ IC
Sbjct: 466 CKTKKSIC 473
>sp|UL24_VZVO|PROTEIN UL24 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 CKWREHIC 8
CK + H+C
Sbjct: 199 CKKKIHVC 206
>sp|UL24_VZVD|PROTEIN UL24 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CKWREHIC 8
CK + H+C
Sbjct: 199 CKKKIHVC 206
>sp|UL06_HCMVA|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 KWREHI 7
+WR H+
Sbjct: 270 RWRSHV 275
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 WREHIC 8
W E IC
Sbjct: 840 WEEGIC 845
>sp|NSP2_ROTJ1|NON-STRUCTURAL protein 2|Rotavirus X (strain
Query: 5 EHICHG 10
EH+C G
Sbjct: 185 EHLCIG 190
>sp|NSP2_ROTB2|NON-STRUCTURAL protein 2|Rotavirus X (isolate
Query: 5 EHICHG 10
EH+C G
Sbjct: 185 EHLCIG 190
>sp|YVEE_VACCC|UNCHARACTERIZED 7.6 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 WREHICHG 10
++ HIC G
Sbjct: 51 YQPHICDG 58
21|SequenceR|110|101|EEEGDCKWRE
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 1 EEEGDCKWRE 10
E E DC W +
Sbjct: 268 ELEFDCSWED 277
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 DCKWRE 10
DC+W E
Sbjct: 1961 DCQWDE 1966
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 EEEGDCKW 8
E+E CKW
Sbjct: 1012 EDEMVCKW 1019
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 EEEGDCKW 8
E+E CKW
Sbjct: 1012 EDEMVCKW 1019
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 EEEGDCKW 8
E+E CKW
Sbjct: 1012 EDEMVCKW 1019
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 EEEGDCKW 8
E+E CKW
Sbjct: 1012 EDEMVCKW 1019
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 EGDCKW 8
E DC W
Sbjct: 812 ESDCNW 817
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 EGDCKW 8
E DC W
Sbjct: 812 ESDCDW 817
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 EEEGDCKW 8
E+E CKW
Sbjct: 1013 EDELVCKW 1020
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 EEEGDCKW 8
E+E CKW
Sbjct: 1013 EDELVCKW 1020
>sp|KTHY_VACCT|THYMIDYLATE kinase|Vaccinia virus (strain Tian Tan)
Query: 2 EEGDCKWR 9
EEGD W+
Sbjct: 162 EEGDIHWQ 169
>sp|KTHY_VACCC|THYMIDYLATE kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 EEGDCKWR 9
EEGD W+
Sbjct: 162 EEGDIHWQ 169
>sp|KTHY_VACCA|THYMIDYLATE kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 EEGDCKWR 9
EEGD W+
Sbjct: 162 EEGDIHWQ 169
>sp|KTHY_CWPXB|THYMIDYLATE kinase|Cowpox virus (strain Brighton Red)
Query: 2 EEGDCKWR 9
EEGD W+
Sbjct: 162 EEGDIHWQ 169
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 5 DCKWRE 10
DC WR+
Sbjct: 545 DCYWRK 550
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 5 DCKWRE 10
DC WR+
Sbjct: 545 DCYWRK 550
>sp|KTHY_MONPV|THYMIDYLATE kinase|Monkeypox virus (MPXV)
Query: 2 EEGDCKWR 9
EEGD W+
Sbjct: 162 EEGDIHWQ 169
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 EEEGDCKW 8
+EE D KW
Sbjct: 865 KEEDDGKW 872
>sp|KTHY_CWPXG|THYMIDYLATE kinase|Cowpox virus (strain GRI-90 /
Query: 2 EEGDCKWR 9
EEGD W+
Sbjct: 162 EEGDIHWQ 169
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 6 CKWRE 10
CKW E
Sbjct: 5447 CKWTE 5451
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 6 CKWRE 10
CKW E
Sbjct: 5467 CKWTE 5471
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 6 CKWRE 10
CKW E
Sbjct: 5497 CKWTE 5501
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 5 DCKWRE 10
DC W E
Sbjct: 266 DCDWLE 271
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 5 DCKW 8
DCKW
Sbjct: 275 DCKW 278
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 EEGDC 6
EEGDC
Sbjct: 827 EEGDC 831
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 5 DCKW 8
DCKW
Sbjct: 261 DCKW 264
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 EGDCKW 8
EGD W
Sbjct: 948 EGDASW 953
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 3 EGDCKW 8
EGD W
Sbjct: 948 EGDASW 953
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 3 EGDCKW 8
EGDC +
Sbjct: 400 EGDCNY 405
>sp|VE2_HPV63|REGULATORY protein E2|Human papillomavirus type 63
Query: 2 EEGDCKWRE 10
+ GD +WR+
Sbjct: 140 QNGDNRWRK 148
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 3 EGDCKWRE 10
EGD +W++
Sbjct: 392 EGDGQWQD 399
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 EEGDCKWRE 10
+E CKW +
Sbjct: 1072 KEKFCKWTQ 1080
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 EEGDCKWRE 10
+E CKW +
Sbjct: 1079 KEKFCKWTQ 1087
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 EEGDCKWRE 10
+E CKW +
Sbjct: 1079 KEKFCKWTQ 1087
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 EEGDCKWRE 10
+E CKW +
Sbjct: 1075 KEKFCKWTQ 1083
>sp|VE2_HPV56|REGULATORY protein E2|Human papillomavirus 56
Query: 4 GDCKWRE 10
GDC W++
Sbjct: 84 GDCGWQK 90
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 1 EEEGDCKWRE 10
++ GD +W E
Sbjct: 706 DDAGDEEWAE 715
22|SequenceR|115|106|SGDPCEEEGD
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GDPCEEE 8
G+PCE E
Sbjct: 213 GNPCERE 219
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 3 DPCEEEGD 10
D C EEGD
Sbjct: 382 DECSEEGD 389
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 3 DPCEE 7
DPCEE
Sbjct: 205 DPCEE 209
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 3 DPCEEEGD 10
D C EEGD
Sbjct: 381 DECTEEGD 388
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 GDPCEEEGD 10
G P EEE D
Sbjct: 1793 GAPTEEESD 1801
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 2 GDPCEE 7
GDPC++
Sbjct: 563 GDPCKQ 568
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SGDPC 5
SGDPC
Sbjct: 474 SGDPC 478
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 SGDPC 5
SGDPC
Sbjct: 474 SGDPC 478
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 PCEEEGD 10
PC+E G+
Sbjct: 353 PCDEHGE 359
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 PCEEEGD 10
PC+E G+
Sbjct: 353 PCDEHGE 359
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 PCEEEGD 10
PC+E G+
Sbjct: 353 PCDEHGE 359
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 2 GDPCEEEG 9
G PC EG
Sbjct: 594 GAPCSSEG 601
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GDPCEEEG 9
G PC EG
Sbjct: 594 GAPCSSEG 601
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 3 DPCEEEG 9
DP E+EG
Sbjct: 55 DPLEDEG 61
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 2 GDPCEEE 8
GDPC E
Sbjct: 653 GDPCNLE 659
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 4 PCEEEGD 10
PCE +GD
Sbjct: 335 PCESDGD 341
>sp|E434_ADE12|EARLY E4 34 kDa protein|Human adenovirus A serotype 12
Query: 4 PCEEE 8
PCEE+
Sbjct: 21 PCEEQ 25
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 4 PCEEEGD 10
PCE GD
Sbjct: 335 PCESNGD 341
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 4 PCEEEGD 10
PCE GD
Sbjct: 336 PCESNGD 342
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 4 PCEEEGD 10
PCE GD
Sbjct: 336 PCESNGD 342
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 4 PCEEEGD 10
PCE GD
Sbjct: 336 PCESNGD 342
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 4 PCEEEGD 10
PCE GD
Sbjct: 336 PCESNGD 342
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 4 PCEEEGD 10
PCE GD
Sbjct: 336 PCESNGD 342
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 4 PCEEEGD 10
PCE GD
Sbjct: 335 PCESNGD 341
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 4 PCEEEGD 10
PCE GD
Sbjct: 336 PCESNGD 342
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 4 PCEEEGD 10
PCE GD
Sbjct: 336 PCESNGD 342
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 2 GDPC 5
GDPC
Sbjct: 446 GDPC 449
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 4 PCEEEGD 10
PCE GD
Sbjct: 335 PCESNGD 341
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 4 PCEEEGD 10
PCE GD
Sbjct: 335 PCESNGD 341
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 350 PCTEHGE 356
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 350 PCTEHGE 356
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 340 PCAEHGE 346
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 340 PCAEHGE 346
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 340 PCTEHGE 346
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 340 PCAEHGE 346
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 340 PCAEHGE 346
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 340 PCAEHGE 346
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 351 PCTEHGE 357
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 346 PCTEHGE 352
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 351 PCTEHGE 357
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 351 PCTEHGE 357
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 351 PCTEHGE 357
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 351 PCTEHGE 357
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 351 PCTEHGE 357
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 351 PCTEHGE 357
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 351 PCAEHGE 357
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 351 PCAEHGE 357
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 351 PCTEHGE 357
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 351 PCTEHGE 357
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 351 PCTEHGE 357
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 351 PCTEHGE 357
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 351 PCAEHGE 357
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 351 PCAEHGE 357
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 353 PCTEHGE 359
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 351 PCTENGE 357
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 2 GDPCEE 7
G PC+E
Sbjct: 154 GQPCDE 159
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 2 GDPCEE 7
G PC+E
Sbjct: 154 GQPCDE 159
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 2 GDPCEE 7
G PC+E
Sbjct: 154 GQPCDE 159
>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain
Query: 2 GDPCEE 7
G PC+E
Sbjct: 154 GQPCDE 159
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 SGDPCEEEGD 10
SG+ EEE D
Sbjct: 50 SGNAAEEEED 59
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 GDPCEE 7
G PCE+
Sbjct: 167 GHPCED 172
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 351 PCYEHGE 357
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 351 PCYEHGE 357
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 351 PCYEHGE 357
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 351 PCYEHGE 357
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 2 GDPCEEE 8
G+PCE E
Sbjct: 1100 GNPCERE 1106
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GDPCEEEGD 10
G+P EGD
Sbjct: 165 GEPSAAEGD 173
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GDPCEEEGD 10
G+P EGD
Sbjct: 165 GEPSAAEGD 173
>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 4 PCEEEG 9
PC +EG
Sbjct: 260 PCPKEG 265
>sp|TAX_HTL32|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 4 PCEEEG 9
PC +EG
Sbjct: 260 PCPKEG 265
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 4 PCEEEGD 10
PC E G+
Sbjct: 346 PCVEHGE 352
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 3 DPCEEEGD 10
D C +EG+
Sbjct: 391 DDCNQEGN 398
23|SequenceR|120|111|AESEDSGDPC
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 1 AESEDSGD 8
AESEDSGD
Sbjct: 179 AESEDSGD 186
>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16
Query: 5 DSGDPC 10
D+G+PC
Sbjct: 246 DTGNPC 251
>sp|VE8E2_HPV16|PROTEIN E8^E2C|Human papillomavirus type 16
Query: 5 DSGDPC 10
D+G+PC
Sbjct: 58 DTGNPC 63
>sp|REV_HV1YB|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 4 EDSGDP 9
EDSGDP
Sbjct: 88 EDSGDP 93
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 AESEDSGDPC 10
AESE SG P
Sbjct: 2626 AESEASGPPS 2635
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 AESEDSGDPC 10
AESE SG P
Sbjct: 2621 AESEASGPPS 2630
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 AESEDSGDPC 10
AESE SG P
Sbjct: 2648 AESEASGPPS 2657
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 2 ESEDSG 7
ESEDSG
Sbjct: 128 ESEDSG 133
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 SEDSGDPC 10
+ED+ PC
Sbjct: 1970 NEDTATPC 1977
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 1 AESEDSG 7
+E+EDSG
Sbjct: 636 SETEDSG 642
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 SEDSGDPC 10
+ED+ PC
Sbjct: 1969 NEDTATPC 1976
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 AESEDSG 7
+E+EDSG
Sbjct: 636 SETEDSG 642
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 1 AESEDSG 7
+E+EDSG
Sbjct: 635 SEAEDSG 641
>sp|M2_I77AC|MATRIX protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 5 DSGDP 9
DSGDP
Sbjct: 21 DSGDP 25
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 4 EDSGDPC 10
ED+ PC
Sbjct: 1971 EDTSTPC 1977
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 1 AESEDSGD 8
+E ED GD
Sbjct: 620 SEDEDDGD 627
24|SequenceR|125|116|QKTCTAESED
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 4 CTAESED 10
CT++SED
Sbjct: 697 CTSDSED 703
25|SequenceR|130|121|EAPCVQKTCT
>sp|FUS_PI1HC|FUSION glycoprotein F0|Human parainfluenza 1 virus (strain
Query: 2 APCVQKTCT 10
A C+ TCT
Sbjct: 388 ANCIASTCT 396
>sp|FUS_PI3H4|FUSION glycoprotein F0|Human parainfluenza 3 virus (strain
Query: 2 APCVQKTCT 10
A C+ TCT
Sbjct: 385 ANCITTTCT 393
>sp|PG181_VACCC|PROTEIN OPG181|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PCVQKTC 9
PC ++ C
Sbjct: 30 PCCERVC 36
>sp|PG181_MONPV|PROTEIN OPG181|Monkeypox virus (MPXV)
Query: 3 PCVQKTC 9
PC ++ C
Sbjct: 30 PCCERVC 36
>sp|PG181_VARV|PROTEIN OPG181|Variola virus
Query: 3 PCVQKTC 9
PC ++ C
Sbjct: 30 PCCERVC 36
>sp|PG181_VAR67|PROTEIN OPG181|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 PCVQKTC 9
PC ++ C
Sbjct: 30 PCCERVC 36
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 CVQKTCT 10
CV+K C+
Sbjct: 2680 CVRKCCS 2686
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 4 CVQKTCT 10
CV+K C+
Sbjct: 2710 CVRKCCS 2716
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 EAPCVQKT 8
E+PCV T
Sbjct: 367 ESPCVDVT 374
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 EAPCVQKT 8
E+PCV T
Sbjct: 367 ESPCVDVT 374
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 EAPCVQKT 8
E+PCV T
Sbjct: 367 ESPCVDVT 374
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 CVQKTCT 10
CV+K C+
Sbjct: 2660 CVRKCCS 2666
>sp|ORF2_VZVO|MEMBRANE protein 2|Varicella-zoster virus (strain Oka vaccine)
Query: 1 EAPCVQKTCT 10
E PC+ T T
Sbjct: 167 ETPCITSTLT 176
>sp|ORF2_VZVD|MEMBRANE protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 EAPCVQKTCT 10
E PC+ T T
Sbjct: 167 ETPCITSTLT 176
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 CVQKTCT 10
CVQ CT
Sbjct: 126 CVQMECT 132
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 3 PCVQKT 8
PC QKT
Sbjct: 235 PCTQKT 240
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 APCVQKTCT 10
AP ++ TCT
Sbjct: 2210 APSLKATCT 2218
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 APCVQKTCT 10
AP ++ TCT
Sbjct: 2209 APSLKATCT 2217
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 CVQKTCT 10
CV+K C+
Sbjct: 2680 CVRKCCS 2686
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 CVQKTCT 10
CV+K C+
Sbjct: 2710 CVRKCCS 2716
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 CVQKTCT 10
CV+K C+
Sbjct: 2660 CVRKCCS 2666
>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 206 ECVCINGTCT 215
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PCVQKTC 9
PC +TC
Sbjct: 476 PCAARTC 482
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PCVQKTC 9
PC +TC
Sbjct: 476 PCAARTC 482
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 APCVQKTCT 10
AP ++ TCT
Sbjct: 2212 APSLRATCT 2220
>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I68A6|NEURAMINIDASE A virus (strain A/Northern
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I68A4|NEURAMINIDASE A virus (strain A/Hong
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I68A0|NEURAMINIDASE A virus (strain A/Aichi/2/1968
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 EAPCVQK 7
E PCV K
Sbjct: 2071 EGPCVPK 2077
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 APCVQKTCT 10
AP ++ TCT
Sbjct: 2212 APSLRATCT 2220
>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 EAPCVQK 7
E PCV K
Sbjct: 2071 EGPCVPK 2077
>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I67A0|NEURAMINIDASE A virus (strain A/Tokyo/3/1967
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 CVQKTCT 10
CV TCT
Sbjct: 125 CVTLTCT 131
>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
>sp|VE8E2_HPV39|PROTEIN E8^E2C|Human papillomavirus 39
Query: 3 PCVQKT 8
PC QKT
Sbjct: 40 PCTQKT 45
>sp|VP30_MABVP|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 PCVQKTC 9
PC TC
Sbjct: 86 PCTDPTC 92
>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993
Query: 1 EAPCVQKTCT 10
E C+ TCT
Sbjct: 229 ECVCINGTCT 238
26|SequenceR|135|126|GCSLKEAPCV
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 2 CSLKEAPCV 10
C L++APC+
Sbjct: 1188 CILQKAPCL 1196
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 2 CSLKEA 7
CSL+EA
Sbjct: 521 CSLREA 526
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 CSLKEAP 8
C LK AP
Sbjct: 3552 CFLKHAP 3558
27|SequenceR|140|131|KHSTPGCSLK
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 KHSTPGCSLK 10
+H+TPG +L+
Sbjct: 759 QHTTPGVNLE 768
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 1 KHSTPGCSLK 10
KH+ PG SL+
Sbjct: 33 KHTHPGISLE 42
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka
Query: 1 KHSTPGCSLK 10
KH+ PG SL+
Sbjct: 33 KHTHPGISLE 42
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 3 STPGCSL 9
STPGC L
Sbjct: 335 STPGCML 341
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 3 STPGCSL 9
STPGC L
Sbjct: 347 STPGCML 353
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 3 STPGCSL 9
STPGC L
Sbjct: 335 STPGCML 341
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 3 STPGCSL 9
STPGC L
Sbjct: 335 STPGCML 341
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 3 STPGCSL 9
STPGC L
Sbjct: 348 STPGCML 354
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 3 STPGCSL 9
STPGC L
Sbjct: 335 STPGCML 341
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 3 STPGCSL 9
STPGC L
Sbjct: 348 STPGCML 354
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 3 STPGCSL 9
STPGC L
Sbjct: 341 STPGCML 347
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 3 STPGCSL 9
STPGC L
Sbjct: 341 STPGCML 347
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 3 STPGCSL 9
STPGC L
Sbjct: 334 STPGCML 340
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 3 STPGCSL 9
STPGC L
Sbjct: 334 STPGCML 340
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 3 STPGCSL 9
STPGC L
Sbjct: 334 STPGCML 340
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 3 STPGCSL 9
STPGC L
Sbjct: 334 STPGCML 340
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 3 STPGCSL 9
STPGC L
Sbjct: 335 STPGCML 341
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 3 STPGCSL 9
STPGC L
Sbjct: 335 STPGCML 341
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 3 STPGCSL 9
STPGC L
Sbjct: 335 STPGCML 341
>sp|MC007_MCV1|PROTEIN MC007|Molluscum contagiosum virus subtype 1
Query: 1 KHSTPGCS 8
+H+ PGC+
Sbjct: 22 RHARPGCA 29
>sp|BDL35_EBVB9|LATE gene expression regulator BDLF3.5|Epstein-Barr virus (strain
Query: 3 STPGCS 8
S PGCS
Sbjct: 2 SAPGCS 7
>sp|NEF_HV1JR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 KHSTPGCS 8
KHS PG S
Sbjct: 7 KHSVPGWS 14
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 3 STPGC 7
+TPGC
Sbjct: 525 ATPGC 529
>sp|SPIKE_ADE12|FIBER protein|Human adenovirus A serotype 12
Query: 3 STPGCSL 9
STP CS
Sbjct: 575 STPSCSF 581
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 KHSTPGC 7
+H T GC
Sbjct: 463 RHDTSGC 469
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 1 KHSTPGCSL 9
+HS P C L
Sbjct: 393 RHSLPQCWL 401
>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31
Query: 1 KHSTPGCSL 9
+ STP CS
Sbjct: 542 QFSTPSCSF 550
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 2 HSTPGCSL 9
H TPG L
Sbjct: 31 HPTPGTML 38
>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 HSTPGC 7
H TP C
Sbjct: 272 HGTPPC 277
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 PGCSL 9
PGCS+
Sbjct: 635 PGCSV 639
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 KHSTPGCS 8
KH GCS
Sbjct: 2386 KHVAYGCS 2393
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 KHSTPGCS 8
KH GCS
Sbjct: 2386 KHVAYGCS 2393
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 1 KHSTPGCSL 9
+HS P C L
Sbjct: 371 QHSLPRCWL 379
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 KHSTPGCS 8
KH+ P C+
Sbjct: 502 KHTRPVCA 509
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 KHSTPGCS 8
KH+ P C+
Sbjct: 502 KHTRPVCA 509
>sp|CEP1_HHV11|CYTOPLASMIC envelopment protein 1|Human herpesvirus 1 (strain 17)
Query: 5 PGCSLK 10
PGC L+
Sbjct: 67 PGCRLR 72
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 1 KHSTPGCSL 9
+HS P C L
Sbjct: 365 EHSLPRCWL 373
28|SequenceR|145|136|SAPVCKHSTP
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 5 CKHSTP 10
CKH TP
Sbjct: 509 CKHKTP 514
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 5 CKHSTP 10
C+H+TP
Sbjct: 758 CQHTTP 763
>sp|UL49_HHV6U|PROTEIN U33|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 APVCKHST 9
AP+CKH +
Sbjct: 13 APLCKHGS 20
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 3 PVCKHSTP 10
P C+HS P
Sbjct: 336 PYCRHSAP 343
>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)
Query: 2 APVCKH 7
AP+CKH
Sbjct: 13 APLCKH 18
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PVCKHST 9
PVC H+T
Sbjct: 506 PVCAHTT 512
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PVCKHST 9
PVC H+T
Sbjct: 506 PVCAHTT 512
>sp|UL49_HHV7J|PROTEIN U33|Human herpesvirus 7 (strain JI)
Query: 2 APVCKHST 9
+P+CKH +
Sbjct: 13 SPLCKHGS 20
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 SAPVCKHSTP 10
+AP C TP
Sbjct: 190 TAPWCTSDTP 199
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 VCKHS 8
VCKHS
Sbjct: 371 VCKHS 375
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 VCKHS 8
VCKHS
Sbjct: 371 VCKHS 375
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 VCKHS 8
VCKHS
Sbjct: 371 VCKHS 375
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 VCKHS 8
VCKHS
Sbjct: 371 VCKHS 375
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 VCKHS 8
VCKHS
Sbjct: 371 VCKHS 375
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 VCKHS 8
VCKHS
Sbjct: 371 VCKHS 375
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 1 SAPVCK 6
+APVCK
Sbjct: 171 TAPVCK 176
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 VCKHS 8
VCKHS
Sbjct: 91 VCKHS 95
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 VCKHS 8
VCKHS
Sbjct: 91 VCKHS 95
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 SAPVCKHSTP 10
+AP CK P
Sbjct: 190 TAPWCKTGCP 199
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 SAPVCKHSTP 10
+AP CK P
Sbjct: 190 TAPWCKTGCP 199
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 VCKHS 8
VCKHS
Sbjct: 140 VCKHS 144
>sp|EBNA2_EBVB9|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SAPVCKHS 8
+APVC++S
Sbjct: 408 AAPVCRNS 415
>sp|EBNA2_EBVG|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SAPVCKHS 8
+APVC++S
Sbjct: 372 AAPVCRNS 379
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 VCKHS 8
VCKHS
Sbjct: 91 VCKHS 95
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 VCKHS 8
VCKHS
Sbjct: 271 VCKHS 275
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 3 PVCKHSTP 10
P C +TP
Sbjct: 127 PSCSQATP 134
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 3 PVCKHSTP 10
P C +TP
Sbjct: 127 PSCSQATP 134
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 3 PVCKHSTP 10
P C +TP
Sbjct: 127 PSCSQATP 134
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 3 PVCKHSTP 10
P C +TP
Sbjct: 133 PQCSQATP 140
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 VCKHS 8
VCKHS
Sbjct: 371 VCKHS 375
>sp|VP35_EBOZM|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 PVCKHS 8
P+C HS
Sbjct: 77 PICNHS 82
>sp|VP35_EBOZ5|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 PVCKHS 8
P+C HS
Sbjct: 77 PICNHS 82
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 PVCKHSTP 10
PV K +TP
Sbjct: 42 PVWKEATP 49
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 SAPVC 5
SAP+C
Sbjct: 10 SAPIC 14
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 SAPVCKH 7
SAP C H
Sbjct: 2080 SAPWCLH 2086
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 SAPVCKH 7
S P C H
Sbjct: 3216 SVPFCSH 3222
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 SAPVCKH 7
S P C H
Sbjct: 3197 SVPFCSH 3203
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 2 APVCKHST 9
+PVC H +
Sbjct: 95 SPVCVHPS 102
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 VCKHS 8
+CKHS
Sbjct: 371 LCKHS 375
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 APVCK 6
APVCK
Sbjct: 2134 APVCK 2138
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SAPVCK 6
S PVCK
Sbjct: 325 SCPVCK 330
29|SequenceR|150|141|GDCRWSAPVC
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 2 DCRWSAPV 9
DC++ APV
Sbjct: 503 DCKYKAPV 510
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 2 DCRWSAPV 9
DC++ APV
Sbjct: 503 DCKYKAPV 510
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 2 DCRWSAPVC 10
DC S PVC
Sbjct: 365 DCVRSVPVC 373
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 2 DCRWSAPVC 10
DC S PVC
Sbjct: 365 DCVRSVPVC 373
>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)
Query: 2 DCRWSAPVC 10
D +W PVC
Sbjct: 45 DSKWLNPVC 53
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 1 GDCRWSAPV 9
G+ WSAP+
Sbjct: 73 GEILWSAPL 81
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 2 DCRWSAPV 9
DC++ AP+
Sbjct: 502 DCKYKAPM 509
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 DCRWSAPV 9
+ RWS PV
Sbjct: 1382 NSRWSGPV 1389
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 4 RWSAPV 9
RWS PV
Sbjct: 1384 RWSGPV 1389
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 2 DCRWSAPV 9
DC++ AP+
Sbjct: 503 DCKYKAPM 510
>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 2 DCRWSAPVC 10
D +W P C
Sbjct: 45 DSKWLNPAC 53
>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus
Query: 2 DCRWSAPVC 10
D +W P C
Sbjct: 48 DSKWLNPTC 56
>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate
Query: 2 DCRWSAPVC 10
D +W P C
Sbjct: 48 DSKWLNPTC 56
>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 2 DCRWSAPVC 10
D +W P C
Sbjct: 47 DSKWLNPAC 55
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 2 DCRWSAPV 9
DC++ AP+
Sbjct: 504 DCKYRAPM 511
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 2 DCRWSAP 8
DC++ AP
Sbjct: 505 DCKYRAP 511
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 2 DCRWSAP 8
DC++ AP
Sbjct: 505 DCKYRAP 511
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DCRWSAPVC 10
DC PVC
Sbjct: 362 DCVRPVPVC 370
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 2 DCRWSAPV 9
DC+ AP+
Sbjct: 506 DCKHKAPI 513
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 2 DCRWSAPV 9
DC+ AP+
Sbjct: 504 DCKHKAPI 511
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 2 DCRWSAP 8
+C W+AP
Sbjct: 279 ECHWTAP 285
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 2 DCRWSAP 8
+C W+AP
Sbjct: 279 ECHWTAP 285
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 2 DCRWSAPV 9
DC+ AP+
Sbjct: 504 DCKHKAPI 511
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 2 DCRWSAP 8
+C W+AP
Sbjct: 279 ECHWTAP 285
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 2 DCRWSAPV 9
DC+ AP+
Sbjct: 503 DCKHKAPI 510
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 4 RWSAP 8
RW AP
Sbjct: 1050 RWEAP 1054
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 1 GDCRWSAPVC 10
G CR P C
Sbjct: 600 GTCRILGPSC 609
>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain Copenhagen)
Query: 5 WSAPVC 10
WS+ VC
Sbjct: 202 WSSEVC 207
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 GDCRWSAPVC 10
G CR P C
Sbjct: 600 GTCRILGPSC 609
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 GDCRWSAPVC 10
G CR P C
Sbjct: 600 GTCRILGPSC 609
>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31
Query: 5 WSAPV 9
WSAP+
Sbjct: 106 WSAPL 110
>sp|SPIKE_ADE12|FIBER protein|Human adenovirus A serotype 12
Query: 5 WSAPV 9
WSAP+
Sbjct: 107 WSAPL 111
>sp|SHUT_HHV1K|VIRION host shutoff protein|Human herpesvirus 1 (strain KOS)
Query: 2 DCRWSAP 8
+C W+ P
Sbjct: 277 ECHWTPP 283
>sp|SHUT_HHV11|VIRION host shutoff protein|Human herpesvirus 1 (strain 17)
Query: 2 DCRWSAP 8
+C W+ P
Sbjct: 277 ECHWTPP 283
>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)
Query: 5 WSAPVC 10
WS+ VC
Sbjct: 202 WSSEVC 207
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 GDCRWS 6
G C WS
Sbjct: 1138 GQCGWS 1143
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 GDCRWS 6
G C WS
Sbjct: 1137 GQCGWS 1142
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 GDCRWS 6
G C WS
Sbjct: 1136 GQCGWS 1141
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 GDCRWS 6
G C WS
Sbjct: 1157 GQCGWS 1162
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 2 DCRWSAPV 9
DC+ AP+
Sbjct: 502 DCKHKAPM 509
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DCRW 5
DC+W
Sbjct: 1961 DCQW 1964
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 2 DCRW 5
DC+W
Sbjct: 275 DCKW 278
>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54
Query: 4 RWSAP 8
RW+AP
Sbjct: 101 RWNAP 105
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 GDCRWSAP 8
G+C + AP
Sbjct: 1637 GNCTFGAP 1644
Query: 1 GDCRWSA 7
GD WS+
Sbjct: 949 GDASWSS 955
>sp|UL49_HHV7J|PROTEIN U33|Human herpesvirus 7 (strain JI)
Query: 3 CRWSAPVC 10
CR +P+C
Sbjct: 9 CRLISPLC 16
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 GDCRWSAPV 9
G WSAP+
Sbjct: 263 GSEEWSAPL 271
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 2 DCRWSAPV 9
DC+ AP+
Sbjct: 503 DCKHKAPM 510
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 5 WSAPVC 10
W++PVC
Sbjct: 812 WASPVC 817
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 1 GDCRWSAPV 9
G WSAP+
Sbjct: 263 GSEEWSAPL 271
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 2 DCRW 5
DC+W
Sbjct: 261 DCKW 264
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 5 WSAPVC 10
W++PVC
Sbjct: 812 WASPVC 817
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 5 WSAPVC 10
W++PVC
Sbjct: 812 WASPVC 817
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 GDCRWSAP 8
G+C + AP
Sbjct: 1637 GNCTFGAP 1644
Query: 1 GDCRWSA 7
GD WS+
Sbjct: 949 GDASWSS 955
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 5 WSAPVC 10
W++PVC
Sbjct: 812 WASPVC 817
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 5 WSAPVC 10
W++PVC
Sbjct: 812 WASPVC 817
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 5 WSAPVC 10
W++PVC
Sbjct: 812 WASPVC 817
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 5 WSAPVC 10
W++PVC
Sbjct: 812 WASPVC 817
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 5 WSAPVC 10
W++PVC
Sbjct: 812 WASPVC 817
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 5 WSAPVC 10
W++PVC
Sbjct: 812 WASPVC 817
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 GDCRWSAPVC 10
G CR P C
Sbjct: 599 GTCRILGPDC 608
>sp|VP30_EBOZM|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 GDCRWS 6
G C WS
Sbjct: 278 GTCSWS 283
>sp|VP30_EBOZ5|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 GDCRWS 6
G C WS
Sbjct: 278 GTCSWS 283
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 GDCRWSAPVC 10
G CR P C
Sbjct: 599 GTCRILGPDC 608
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 GDCRWSAPVC 10
G CR P C
Sbjct: 599 GTCRILGPDC 608
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 DCRW 5
DC+W
Sbjct: 6917 DCQW 6920
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 4 RWSAPVC 10
RW+ +C
Sbjct: 422 RWTLEIC 428
>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 2 DCRWSA 7
DC+W +
Sbjct: 62 DCQWCS 67
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 DCRWSA 7
DC+W +
Sbjct: 62 DCQWCS 67
30|SequenceR|155|146|ECDKEGDCRW
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 ECDKEGDCR 9
EC G+CR
Sbjct: 2971 ECHLRGECR 2979
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 5 EGDCRW 10
E DC W
Sbjct: 812 ESDCNW 817
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 2 CDKEGDC 8
CD E DC
Sbjct: 272 CDIEVDC 278
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 2 CDKEGDC 8
CD E DC
Sbjct: 272 CDIEVDC 278
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 5 EGDCRW 10
E DC W
Sbjct: 812 ESDCDW 817
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ECDKEGDCR 9
E D +GDCR
Sbjct: 694 EEDLDGDCR 702
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 ECDKEGDCR 9
E D +GDCR
Sbjct: 694 EEDLDGDCR 702
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ECDKEGDCR 9
E D +GDCR
Sbjct: 694 EEDLDGDCR 702
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 ECDKEGDCR 9
+C K CR
Sbjct: 552 QCSKTAQCR 560
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 1 ECDKEGD 7
EC +EGD
Sbjct: 383 ECSEEGD 389
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 3 DKEGDC 8
DKE DC
Sbjct: 513 DKEKDC 518
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 3 DKEGDC 8
DKE DC
Sbjct: 513 DKEKDC 518
>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)
Query: 2 CDKEGDC 8
CD + DC
Sbjct: 60 CDMQTDC 66
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 3 DKEGDC 8
DKE DC
Sbjct: 513 DKEKDC 518
>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CDKEGDC 8
CD + DC
Sbjct: 58 CDMQTDC 64
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 3 DKEGDC 8
DKE DC
Sbjct: 512 DKEKDC 517
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 1 ECDKEGD 7
EC +EGD
Sbjct: 382 ECTEEGD 388
>sp|CXCL1_HCMVM|CHEMOKINE vCXCL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 DKEGDCRW 10
DK D RW
Sbjct: 88 DKRNDNRW 95
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 5 EGDCRW 10
EGDC +
Sbjct: 400 EGDCNY 405
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 3 DKEGD 7
DKEGD
Sbjct: 1217 DKEGD 1221
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 3 DKEGD 7
DKEGD
Sbjct: 1217 DKEGD 1221
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 KEGDCRW 10
+ GD RW
Sbjct: 727 RRGDGRW 733
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 3 DKEGDC 8
D+EG C
Sbjct: 1129 DREGQC 1134
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 3 DKEGDC 8
D+EG C
Sbjct: 1129 DREGQC 1134
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 4 KEGDC 8
K+GDC
Sbjct: 178 KDGDC 182
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 ECDKEGDCR 9
+C K+ CR
Sbjct: 553 QCTKKEQCR 561
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 ECDKEGDCR 9
+C K+ CR
Sbjct: 553 QCTKKEQCR 561
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 ECDKEGDCR 9
+C K+ CR
Sbjct: 553 QCTKKEQCR 561
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 ECDKEGDCR 9
+C K+ CR
Sbjct: 553 QCTKKEQCR 561
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 ECDKEGDCR 9
+C K+ CR
Sbjct: 552 QCTKKEQCR 560
>sp|UL92_HCMVM|UNCHARACTERIZED protein UL92|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CDKEGDC 8
CD G C
Sbjct: 2 CDASGAC 8
>sp|UL92_HCMVA|PROTEIN UL92|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CDKEGDC 8
CD G C
Sbjct: 2 CDASGAC 8
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 ECDKEGDC 8
+ D+EG C
Sbjct: 1118 KADREGHC 1125
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 4 KEGDC 8
K+GDC
Sbjct: 1165 KKGDC 1169
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 4 KEGDC 8
K+GDC
Sbjct: 1165 KKGDC 1169
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 2 CDKEGDC 8
CD + DC
Sbjct: 293 CDGDRDC 299
>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus
Query: 1 ECDKEGDC 8
E DK DC
Sbjct: 207 EHDKRDDC 214
31|SequenceR|160|151|EDAGGECDKE
>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27
Query: 3 AGGECDK 9
AGG+CDK
Sbjct: 344 AGGKCDK 350
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 4 GGECDK 9
GGECD+
Sbjct: 171 GGECDQ 176
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 2 DAGGECDKE 10
DAGG D+E
Sbjct: 710 DAGGPGDEE 718
>sp|VPU_HV1Y2|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 EDAGGECD 8
ED+G E D
Sbjct: 51 EDSGNESD 58
>sp|VPU_HV1ET|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 EDAGGECD 8
ED+G E D
Sbjct: 56 EDSGNESD 63
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 EDAGGECD 8
EDAG E +
Sbjct: 2386 EDAGSEAE 2393
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 GGECDKE 10
GGE D E
Sbjct: 2388 GGESDSE 2394
>sp|VPU_HV190|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 EDAGGECD 8
ED+G E D
Sbjct: 50 EDSGNESD 57
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 GGECDKE 10
GGE D E
Sbjct: 2375 GGELDSE 2381
32|SequenceR|165|156|TACGAEDAGG
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 1 TACGAEDAG 9
T CG ++AG
Sbjct: 198 TPCGTQNAG 206
>sp|UL20_HHV2H|PROTEIN UL20|Human herpesvirus 2 (strain HG52)
Query: 2 ACGAEDA 8
ACG ED
Sbjct: 19 ACGGEDG 25
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 TACGAEDAG 9
+AC EDAG
Sbjct: 1427 SACIFEDAG 1435
>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)
Query: 2 ACGAEDAGG 10
+CG + +GG
Sbjct: 309 SCGHQSSGG 317
>sp|VIE2_HCMVT|VIRAL transcription factor IE2|Human cytomegalovirus (strain Towne)
Query: 2 ACGAEDAGG 10
+CG + +GG
Sbjct: 308 SCGHQSSGG 316
>sp|VIE2_HCMVA|VIRAL transcription factor IE2|Human cytomegalovirus (strain AD169)
Query: 2 ACGAEDAGG 10
+CG + +GG
Sbjct: 309 SCGHQSSGG 317
>sp|IE247_HCMVT|45 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 2 ACGAEDAGG 10
+CG + +GG
Sbjct: 139 SCGHQSSGG 147
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 CGAEDAGG 10
CG + +GG
Sbjct: 1657 CGGDGSGG 1664
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 CGAEDAGG 10
CG + +GG
Sbjct: 1657 CGGDGSGG 1664
>sp|BMRF2_EBVG|PROTEIN BMRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 CGAEDAGG 10
CGA +GG
Sbjct: 254 CGAMASGG 261
>sp|BMRF2_EBVB9|PROTEIN BMRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 CGAEDAGG 10
CGA +GG
Sbjct: 254 CGAMASGG 261
>sp|BMRF2_EBVA8|PROTEIN BMRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 CGAEDAGG 10
CGA +GG
Sbjct: 254 CGAMASGG 261
>sp|VIE3_HCMVT|30 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 2 ACGAEDAGG 10
+CG + +GG
Sbjct: 139 SCGHQSSGG 147
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 4 GAEDAG 9
G EDAG
Sbjct: 328 GVEDAG 333
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 TACGAEDAGG 10
TA G E GG
Sbjct: 269 TAKGGEPVGG 278
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 TACGAEDAGG 10
TA G E GG
Sbjct: 269 TAKGGEPVGG 278
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 TACGAEDAGG 10
TA G E GG
Sbjct: 269 TAKGGEPVGG 278
>sp|BALF1_EBVG|APOPTOSIS regulator BALF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 ACGAEDAGG 10
AC D GG
Sbjct: 115 ACRTADIGG 123
>sp|BALF1_EBVB9|APOPTOSIS regulator BALF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 ACGAEDAGG 10
AC D GG
Sbjct: 115 ACRTADIGG 123
33|SequenceR|170|161|HPACLTACGA
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 1 HPACLTAC 8
H +CL AC
Sbjct: 272 HKSCLPAC 279
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 HPACL 5
HPACL
Sbjct: 1459 HPACL 1463
>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate
Query: 1 HPACLTA 7
HPA LTA
Sbjct: 376 HPAVLTA 382
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 1 HPACLTA 7
HPA LTA
Sbjct: 376 HPAVLTA 382
>sp|UXP_ADE05|U exon protein|Human adenovirus C serotype 5
Query: 1 HPACLTACGA 10
HP T CGA
Sbjct: 95 HPRARTRCGA 104
>sp|UXP_ADE02|U exon protein|Human adenovirus C serotype 2
Query: 1 HPACLTACGA 10
HP T CGA
Sbjct: 95 HPRARTRCGA 104
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 1 HPACLTACG 9
HP L CG
Sbjct: 34 HPKILKKCG 42
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HPACLTACG 9
HP L CG
Sbjct: 34 HPKILKKCG 42
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 1 HPACLTA 7
HP C TA
Sbjct: 580 HPFCCTA 586
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 HPACLTA 7
+PACL A
Sbjct: 163 YPACLGA 169
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 HPACLTA 7
+PACL A
Sbjct: 163 YPACLGA 169
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 1 HPACLTA 7
+PACL A
Sbjct: 163 YPACLGA 169
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 CLTAC 8
C+TAC
Sbjct: 1998 CITAC 2002
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 4 CLTACGA 10
C T CGA
Sbjct: 1056 CETVCGA 1062
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 4 CLTACGA 10
C T CGA
Sbjct: 1056 CETVCGA 1062
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PACLTAC 8
P C T+C
Sbjct: 1304 PLCRTSC 1310
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PACLTAC 8
P C T+C
Sbjct: 1304 PLCRTSC 1310
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PACLTAC 8
P C T+C
Sbjct: 1304 PLCRTSC 1310
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PACLTAC 8
P C T+C
Sbjct: 1304 PLCRTSC 1310
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PACLTAC 8
P C T+C
Sbjct: 1304 PLCRTSC 1310
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 CLTAC 8
C+TAC
Sbjct: 6378 CITAC 6382
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 4 CLTACGA 10
C T CG+
Sbjct: 1318 CCTGCGS 1324
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 4 CLTACGA 10
C T CG+
Sbjct: 1318 CCTGCGS 1324
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 4 CLTACGA 10
C T CG+
Sbjct: 1323 CCTGCGS 1329
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 4 CLTAC 8
CLT+C
Sbjct: 634 CLTSC 638
>sp|IR06_HCMVA|UNCHARACTERIZED protein IRL6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CLTACG 9
C+++CG
Sbjct: 66 CVSSCG 71
>sp|IR06_HCMVM|UNCHARACTERIZED protein IRL6|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CLTACG 9
C+++CG
Sbjct: 66 CVSSCG 71
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 4 CLTACG 9
CL CG
Sbjct: 76 CLLTCG 81
>sp|NEF_HV1RH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 HPACL 5
HP CL
Sbjct: 168 HPICL 172
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 HPACLTACGA 10
H A T CG+
Sbjct: 598 HDATFTRCGS 607
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 4 CLTACG 9
CL CG
Sbjct: 453 CLVLCG 458
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 PACLTA 7
PAC+T+
Sbjct: 1286 PACVTS 1291
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 PACLTA 7
PAC+T+
Sbjct: 1286 PACVTS 1291
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 PACLTA 7
PAC+T+
Sbjct: 1285 PACVTS 1290
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 4 CLTACG 9
C T CG
Sbjct: 1319 CCTGCG 1324
34|SequenceR|175|166|GCQFEHPACL
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 6 HPACL 10
HPACL
Sbjct: 1459 HPACL 1463
>sp|VL2_HPV32|MINOR capsid protein L2|Human papillomavirus type 32
Query: 3 QFEHP 7
+FEHP
Sbjct: 269 EFEHP 273
>sp|VU84_HHV7J|PROTEIN U84|Human herpesvirus 7 (strain JI)
Query: 2 CQFEHPACL 10
C F HP L
Sbjct: 129 CDFMHPCGL 137
>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 GCQFEH 6
GC F+H
Sbjct: 767 GCLFQH 772
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 2 CQFEH 6
CQF+H
Sbjct: 237 CQFDH 241
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 6 HPACL 10
HP+C+
Sbjct: 227 HPSCI 231
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 3 QFEHPACL 10
+ HP CL
Sbjct: 545 RLRHPLCL 552
35|SequenceR|180|171|LCSRNGCQFE
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CSRNGCQF 9
CS++GC F
Sbjct: 2392 CSKSGCLF 2399
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CSRNGCQF 9
CS++GC F
Sbjct: 2392 CSKSGCLF 2399
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CSRNGCQ 8
C+++GCQ
Sbjct: 403 CTKSGCQ 409
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 2 CSRNGCQF 9
C RNG +F
Sbjct: 244 CGRNGIKF 251
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 2 CSRNGCQ 8
C R GCQ
Sbjct: 1067 CLRTGCQ 1073
>sp|M21_HRSVB|PROTEIN M2-1|Human respiratory syncytial virus B
Query: 1 LCSRNGCQFE 10
+ RN C+FE
Sbjct: 1 MSRRNPCKFE 10
>sp|M21_HRSV|PROTEIN M2-1|Human respiratory syncytial virus
Query: 1 LCSRNGCQFE 10
+ RN C+FE
Sbjct: 1 MSRRNPCKFE 10
>sp|M21_HRSVA|PROTEIN M2-1|Human respiratory syncytial virus A
Query: 1 LCSRNGCQFE 10
+ RN C+FE
Sbjct: 1 MSRRNPCKFE 10
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 2 CSRNGCQF 9
CS N C+F
Sbjct: 459 CSSNLCEF 466
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LCSRNG 6
LCSR+G
Sbjct: 1260 LCSRDG 1265
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LCSRNG 6
LCSR+G
Sbjct: 1260 LCSRDG 1265
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LCSRNG 6
LCSR+G
Sbjct: 1260 LCSRDG 1265
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CSRNGCQF 9
CS N C+F
Sbjct: 459 CSANLCEF 466
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 CSRNGCQF 9
CS N C+F
Sbjct: 459 CSANLCEF 466
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LCSRNGCQ 8
LC+ GCQ
Sbjct: 133 LCAAVGCQ 140
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LCSRNGCQ 8
LC+ GCQ
Sbjct: 133 LCAAVGCQ 140
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 LCSRNGCQFE 10
L SR+G +FE
Sbjct: 1904 LGSRHGLKFE 1913
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 LCSRNGCQFE 10
L SR+G +FE
Sbjct: 1880 LNSRHGLKFE 1889
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 LCSRNG 6
LCSR G
Sbjct: 748 LCSRKG 753
>sp|PAP1_MCV1|POLY(A) polymerase catalytic subunit|Molluscum contagiosum virus subtype
Query: 5 NGCQFE 10
NG QFE
Sbjct: 2 NGAQFE 7
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 CSRNGCQF 9
C++ GC F
Sbjct: 2450 CNKAGCLF 2457
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 CSRNGCQF 9
C++ GC F
Sbjct: 2480 CNKAGCLF 2487
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 CSRNGCQF 9
C++ GC F
Sbjct: 2430 CNKAGCLF 2437
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 RNGCQF 9
+NGC F
Sbjct: 331 KNGCPF 336
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 RNGCQF 9
+NGC F
Sbjct: 331 KNGCPF 336
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 RNGCQF 9
+NGC F
Sbjct: 331 KNGCPF 336
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 CSRNGCQF 9
C++ GC F
Sbjct: 2430 CNKAGCLF 2437
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 CSRNGCQF 9
C++ GC F
Sbjct: 2450 CNKAGCLF 2457
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 CSRNGCQF 9
C++ GC F
Sbjct: 2480 CNKAGCLF 2487
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 SRNGC 7
+RNGC
Sbjct: 4039 ARNGC 4043
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 SRNGC 7
+RNGC
Sbjct: 4039 ARNGC 4043
>sp|CEP3_HCMVM|CYTOPLASMIC envelopment protein 3|Human cytomegalovirus (strain Merlin)
Query: 1 LCSRNGCQF 9
LC R C+F
Sbjct: 5 LCKRICCEF 13
>sp|CEP3_HCMVA|CYTOPLASMIC envelopment protein 3|Human cytomegalovirus (strain AD169)
Query: 1 LCSRNGCQF 9
LC R C+F
Sbjct: 5 LCKRICCEF 13
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 1 LCSRNGCQ 8
LCS NG +
Sbjct: 57 LCSLNGVK 64
36|SequenceR|185|176|VFVAALCSRN
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 3 VAALCSRN 10
VAALCS+N
Sbjct: 329 VAALCSQN 336
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 3 VAALCSRN 10
VAALCS+N
Sbjct: 329 VAALCSQN 336
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 3 VAALCSRN 10
VAALCS+N
Sbjct: 329 VAALCSQN 336
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 3 VAALCSRN 10
VAALCS+N
Sbjct: 329 VAALCSQN 336
>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26
Query: 2 FVAALCSRN 10
FV++ CS N
Sbjct: 198 FVSSTCSSN 206
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 3 VAALCSRN 10
VAA+C R+
Sbjct: 115 VAAICDRH 122
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 6 LCSRN 10
LCSRN
Sbjct: 118 LCSRN 122
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 6 LCSRN 10
LCSRN
Sbjct: 118 LCSRN 122
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 1 VFVAALCS 8
V VAALC+
Sbjct: 710 VTVAALCA 717
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 FVAALCSRN 10
FV AL RN
Sbjct: 1516 FVRALIKRN 1524
>sp|TEG7_VZVO|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 5 ALCSRN 10
A CSRN
Sbjct: 79 AACSRN 84
>sp|TEG7_VZVD|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Dumas)
Query: 5 ALCSRN 10
A CSRN
Sbjct: 79 AACSRN 84
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 FVAALCSRN 10
+VA C++N
Sbjct: 274 YVAIFCNQN 282
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 FVAALCSRN 10
+VA C++N
Sbjct: 274 YVAIFCNQN 282
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 2 FVAALCSRN 10
+VAA+C N
Sbjct: 238 WVAAICGVN 246
37|SequenceR|190|181|DDGDCVFVAA
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 DGDCV 6
DGDC+
Sbjct: 1923 DGDCI 1927
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 DGDCV 6
DGDC+
Sbjct: 1923 DGDCI 1927
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 DGDCV 6
DGDC+
Sbjct: 1919 DGDCI 1923
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 DDGDCV 6
DDG+CV
Sbjct: 4217 DDGNCV 4222
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 DDGDCV 6
DDG+CV
Sbjct: 4237 DDGNCV 4242
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 DDGDCV 6
DDG+CV
Sbjct: 4267 DDGNCV 4272
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 DDGDCV 6
DDG+CV
Sbjct: 4217 DDGNCV 4222
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 DDGDCV 6
DDG+CV
Sbjct: 4237 DDGNCV 4242
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 DDGDCV 6
DDG+CV
Sbjct: 4267 DDGNCV 4272
>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 DDGDCV 6
D+G+CV
Sbjct: 206 DNGECV 211
>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 DDGDCV 6
D+G+CV
Sbjct: 206 DNGECV 211
>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 DDGDCV 6
D+G+CV
Sbjct: 206 DNGECV 211
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 DGDCVFVA 9
DG CV +A
Sbjct: 459 DGHCVHLA 466
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 2 DGDC 5
DGDC
Sbjct: 179 DGDC 182
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 DGDCVF 7
DG C+F
Sbjct: 423 DGHCIF 428
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 4 DCVFV 8
DC+F+
Sbjct: 108 DCIFI 112
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 DCVFV 8
DC+F+
Sbjct: 108 DCIFI 112
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 DCVFV 8
DC+F+
Sbjct: 108 DCIFI 112
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 4 DCVFV 8
DC+F+
Sbjct: 108 DCIFI 112
>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)
Query: 4 DCVFV 8
DC+F+
Sbjct: 108 DCIFI 112
>sp|CEP2_HCMVM|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain Merlin)
Query: 1 DDGDCVF 7
DDG C+
Sbjct: 51 DDGSCIL 57
38|SequenceR|195|186|GDGCDDDGDC
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GDGCDDDGDC 10
G G DD DC
Sbjct: 176 GLGLDDKSDC 185
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GDGCDDDGDC 10
G G DD DC
Sbjct: 176 GLGLDDKSDC 185
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GDGCDDDGDC 10
G G DD DC
Sbjct: 176 GLGLDDKSDC 185
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 GDGCDDDG 8
G G DDDG
Sbjct: 935 GSGPDDDG 942
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 4 CDDDGDC 10
CD D DC
Sbjct: 293 CDGDRDC 299
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 2 DGCDDDGD 9
D CDD GD
Sbjct: 433 DKCDDGGD 440
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 4 CDDDGDC 10
CDD G C
Sbjct: 143 CDDPGAC 149
>sp|UL76_HCMVM|PROTEIN UL76|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GCDDDGD 9
GC DD D
Sbjct: 4 GCGDDAD 10
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 5 DDDGD 9
DDDGD
Sbjct: 1452 DDDGD 1456
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 5 DDDGD 9
DDDGD
Sbjct: 1452 DDDGD 1456
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 5 DDDGD 9
DDDGD
Sbjct: 1453 DDDGD 1457
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 5 DDDGD 9
DDDGD
Sbjct: 1453 DDDGD 1457
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 5 DDDGD 9
DDDGD
Sbjct: 1453 DDDGD 1457
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 5 DDDGD 9
DDDGD
Sbjct: 1453 DDDGD 1457
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 1 GDGCDDDGD 9
G+G D+GD
Sbjct: 445 GNGSGDNGD 453
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 2 DGCDDDG 8
DG D+DG
Sbjct: 8 DGTDEDG 14
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 5 DDDGD 9
DDDGD
Sbjct: 1381 DDDGD 1385
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 1 GD-GCDDD 7
GD GC+DD
Sbjct: 1145 GDFGCEDD 1152
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 GD-GCDDD 7
GD GC+DD
Sbjct: 1145 GDFGCEDD 1152
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 1 GD-GCDDD 7
GD GC+DD
Sbjct: 1145 GDFGCEDD 1152
>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GDGCDD 6
DGCD+
Sbjct: 224 ADGCDE 229
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GCDDD 7
GC+DD
Sbjct: 433 GCEDD 437
>sp|VE8E2_HPV54|PROTEIN E8^E2C|Human papillomavirus type 54
Query: 3 GCDDD 7
GCD+D
Sbjct: 70 GCDND 74
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 1 GDGCDDDGDC 10
GD C + DC
Sbjct: 14 GDWCILEADC 23
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 2 DGCDDDGD 9
D C D GD
Sbjct: 382 DDCKDIGD 389
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 GDGCDDDGDC 10
G+G + GDC
Sbjct: 963 GEGPCEPGDC 972
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 GDGCDDDGDC 10
G+G + GDC
Sbjct: 947 GEGPCEPGDC 956
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 GDGCDDDGDC 10
G+G + GDC
Sbjct: 954 GEGPCEPGDC 963
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 GDGCDDDGDC 10
G+G + GDC
Sbjct: 954 GEGPCEPGDC 963
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 GDGCDDDGDC 10
G+G + GDC
Sbjct: 950 GEGPCEPGDC 959
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 2 DGCDDDGD 9
D C D GD
Sbjct: 382 DDCKDVGD 389
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 2 DGCDDDGD 9
D C D GD
Sbjct: 382 DDCKDVGD 389
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 DGCDDDGD 9
D C D GD
Sbjct: 382 DDCKDVGD 389
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 2 DGCDDDGD 9
D C D GD
Sbjct: 382 DDCKDVGD 389
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 DGCDDDGD 9
D C D GD
Sbjct: 382 DDCKDVGD 389
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 2 DGCDDDGD 9
D C D GD
Sbjct: 382 DDCKDVGD 389
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 GDGCDDDGDC 10
GD C + DC
Sbjct: 16 GDWCLLEADC 25
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 GDGCDDDGDC 10
GD C + DC
Sbjct: 16 GDWCLLEADC 25
>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54
Query: 3 GCDDD 7
GCD+D
Sbjct: 262 GCDND 266
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 CDDDGD 9
CDD G+
Sbjct: 347 CDDHGE 352
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 GDGCDDDGDC 10
G+G + GDC
Sbjct: 942 GEGHCEPGDC 951
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 4 CDDD 7
CDDD
Sbjct: 1969 CDDD 1972
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 4 CDDD 7
CDDD
Sbjct: 1969 CDDD 1972
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 4 CDDD 7
CDDD
Sbjct: 1969 CDDD 1972
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 4 CDDD 7
CDDD
Sbjct: 1969 CDDD 1972
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 4 CDDD 7
CDDD
Sbjct: 1969 CDDD 1972
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 4 CDDD 7
CDDD
Sbjct: 1969 CDDD 1972
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 5 DDDGD 9
DDDGD
Sbjct: 420 DDDGD 424
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 4 CDDD 7
CDDD
Sbjct: 1970 CDDD 1973
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 4 CDDD 7
CDDD
Sbjct: 1971 CDDD 1974
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 4 CDDD 7
CDDD
Sbjct: 1971 CDDD 1974
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 1 GDGCDDDGDC 10
GD C + DC
Sbjct: 14 GDWCILEADC 23
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 3 GCDD 6
GCDD
Sbjct: 345 GCDD 348
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 4 CDDD 7
CDDD
Sbjct: 1969 CDDD 1972
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 3 GCDD 6
GCDD
Sbjct: 481 GCDD 484
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 3 GCDD 6
GCDD
Sbjct: 481 GCDD 484
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 1 GDGCDDDGDC 10
GD C + DC
Sbjct: 14 GDWCILEADC 23
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 2 DGCDDDGD 9
D C D GD
Sbjct: 382 DDCRDIGD 389
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 6 DDGDC 10
DDG+C
Sbjct: 4217 DDGNC 4221
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 6 DDGDC 10
DDG+C
Sbjct: 4217 DDGNC 4221
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 DDDGDC 10
D D DC
Sbjct: 1711 DSDSDC 1716
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 DDDGDC 10
D D DC
Sbjct: 1712 DSDSDC 1717
>sp|VE2_HPV61|REGULATORY protein E2|Human papillomavirus type 61
Query: 1 GDGCD 5
GD CD
Sbjct: 292 GDNCD 296
>sp|M2_I77AC|MATRIX protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 4 CDDDGD 9
C+D GD
Sbjct: 19 CNDSGD 24
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 6 DDGDC 10
DDG+C
Sbjct: 4237 DDGNC 4241
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 6 DDGDC 10
DDG+C
Sbjct: 4237 DDGNC 4241
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 6 DDGDC 10
DDG+C
Sbjct: 4267 DDGNC 4271
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GDGCDD 6
GDG DD
Sbjct: 284 GDGRDD 289
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 3 GCDDDGD 9
C DD D
Sbjct: 25 ACSDDSD 31
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 6 DDGDC 10
DDG+C
Sbjct: 4267 DDGNC 4271
39|SequenceR|200|191|GREDSGDGCD
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GREDSGDGC 9
G++ +GDGC
Sbjct: 1429 GKQMAGDGC 1437
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GREDSGDGC 9
G++ +GDGC
Sbjct: 1429 GKQMAGDGC 1437
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 1 GREDSGDGCD 10
G ED G GC+
Sbjct: 5 GTEDEGAGCN 14
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 REDSGDGCD 10
RE+S D CD
Sbjct: 966 REESTDECD 974
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 REDSGDGCD 10
RE+S D CD
Sbjct: 966 REESTDECD 974
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 REDSGDGCD 10
RE+S D CD
Sbjct: 966 REESTDECD 974
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 REDSGDGCD 10
RE+S D CD
Sbjct: 894 REESTDECD 902
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 GREDSGDGCD 10
GRE+SG G +
Sbjct: 3016 GRENSGGGVE 3025
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 GREDSGDGCD 10
GRE+SG G +
Sbjct: 3020 GRENSGGGVE 3029
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 GREDSGDGCD 10
GRE+SG G +
Sbjct: 3020 GRENSGGGVE 3029
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 1 GREDSGDGC 9
G ED G GC
Sbjct: 6 GTEDGGAGC 14
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 REDSGDGCD 10
RE+S D CD
Sbjct: 966 REESTDECD 974
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 REDSGDGCD 10
RE+S D CD
Sbjct: 966 REESTDECD 974
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 REDSGDGCD 10
RE+S D CD
Sbjct: 966 REESTDECD 974
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 1 GREDSGDGC 9
G +D G GC
Sbjct: 6 GTDDEGGGC 14
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 REDSGDGCD 10
RE++ D CD
Sbjct: 966 REENTDECD 974
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 476 EDMGNGC 482
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 476 EDMGNGC 482
>sp|VE5_HPV5B|PROBABLE protein E5|Human papillomavirus type 5b
Query: 1 GREDSG 6
GR+DSG
Sbjct: 72 GRQDSG 77
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 476 EDMGNGC 482
>sp|VE2_HPV61|REGULATORY protein E2|Human papillomavirus type 61
Query: 4 DSGDGCD 10
++GD CD
Sbjct: 290 ETGDNCD 296
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 476 EDMGNGC 482
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 1 GREDSGDGC 9
GR GD C
Sbjct: 300 GRRGGGDSC 308
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 476 EDMGNGC 482
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 476 EDMGNGC 482
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 476 EDMGNGC 482
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 476 EDMGNGC 482
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 476 EDMGNGC 482
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 476 EDMGNGC 482
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 476 EDMGNGC 482
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 476 EDMGNGC 482
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 460 EDMGNGC 466
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 476 EDMGNGC 482
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 476 EDMGNGC 482
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 476 EDMGNGC 482
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 477 EDMGNGC 483
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 476 EDMGNGC 482
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 476 EDMGNGC 482
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 476 EDMGNGC 482
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 476 EDMGNGC 482
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 460 EDMGNGC 466
>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)
Query: 3 EDSGDG 8
ED GDG
Sbjct: 266 EDDGDG 271
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 460 EDMGNGC 466
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 GREDSGDGCD 10
GR++SG G +
Sbjct: 3026 GRKNSGGGVE 3035
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 460 EDMGNGC 466
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 GREDSGDGCD 10
GR++SG G +
Sbjct: 3029 GRKNSGGGVE 3038
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 3 EDSGDGC 9
ED G+GC
Sbjct: 460 EDMGNGC 466
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 GREDSGDGCD 10
GR++SG G +
Sbjct: 3029 GRKNSGGGVE 3038
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 GREDSGDGCD 10
GR++SG G +
Sbjct: 3030 GRKNSGGGVE 3039
>sp|MB43_HHV11|MEMBRANE protein UL43|Human herpesvirus 1 (strain 17)
Query: 2 REDSGDG 8
R+D GDG
Sbjct: 374 RKDPGDG 380
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 REDSGDGCD 10
RE+SG G +
Sbjct: 3000 RENSGGGVE 3008
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 REDSGDGCD 10
RE+SG G +
Sbjct: 3031 RENSGGGVE 3039
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 REDSGDGCD 10
RE+S GC+
Sbjct: 504 REESELGCE 512
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 REDSGDGCD 10
RE+S GC+
Sbjct: 504 REESELGCE 512
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 3 EDSGDGCD 10
ED G G D
Sbjct: 366 EDPGSGTD 373
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 2 REDSGDGC 9
RED D C
Sbjct: 192 REDLRDAC 199
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 REDSGDGCD 10
RE+SG G +
Sbjct: 3007 RENSGGGVE 3015
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 REDSGDGCD 10
RE+SG G +
Sbjct: 3007 RENSGGGVE 3015
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 6 GDGC 9
GDGC
Sbjct: 312 GDGC 315
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 REDSGDGCD 10
RE+SG G +
Sbjct: 3007 RENSGGGVE 3015
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 REDSGDGCD 10
RE+SG G +
Sbjct: 3007 RENSGGGVE 3015
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 REDSGDGCD 10
RE+SG G +
Sbjct: 3007 RENSGGGVE 3015
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 REDSGDGCD 10
RE+SG G +
Sbjct: 3007 RENSGGGVE 3015
>sp|CAP8_ADE05|PRE-HEXON-LINKING protein VIII|Human adenovirus C serotype 5
Query: 3 EDSGDGCD 10
+DS DG D
Sbjct: 220 KDSADGYD 227
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 REDSGDGCD 10
RE+SG G +
Sbjct: 3008 RENSGGGVE 3016
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 REDSGDGCD 10
RE+SG G +
Sbjct: 3008 RENSGGGVE 3016
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 REDSGDGCD 10
RE+SG G +
Sbjct: 3008 RENSGGGVE 3016
>sp|CAP8_ADE02|PRE-HEXON-LINKING protein VIII|Human adenovirus C serotype 2
Query: 3 EDSGDGCD 10
+DS DG D
Sbjct: 220 KDSADGYD 227
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 REDSGDGCD 10
RE++ D CD
Sbjct: 966 REENTDECD 974
40|SequenceR|205|196|APDACGREDS
>sp|VC17_VACCC|ANKYRIN repeat protein C17/B23|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 APDACGRE 8
A D CGRE
Sbjct: 18 AMDYCGRE 25
>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /
Query: 3 DACGRE 8
D CGRE
Sbjct: 2 DYCGRE 7
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 5 CGREDS 10
CGR+DS
Sbjct: 20 CGRQDS 25
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 PDACGR 7
PDAC +
Sbjct: 1490 PDACSK 1495
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 2 PDACG 6
PD CG
Sbjct: 173 PDGCG 177
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 5 CGREDS 10
C REDS
Sbjct: 300 CHREDS 305
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 1 APDACGREDS 10
AP+ C +DS
Sbjct: 129 APNTCQWKDS 138
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 5 CGREDS 10
C REDS
Sbjct: 300 CHREDS 305
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 5 CGREDS 10
C REDS
Sbjct: 300 CHREDS 305
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 5 CGRED 9
CGRE+
Sbjct: 192 CGREE 196
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 CGRED 9
CGRE+
Sbjct: 515 CGREE 519
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 2 PDACGRED 9
PD C R D
Sbjct: 122 PDGCYRVD 129
>sp|CAPSH_ADE04|HEXON protein|Human adenovirus E serotype 4
Query: 1 APDACGREDS 10
AP+ C +DS
Sbjct: 28 APNTCQWKDS 37
41|SequenceR|210|201|ERPGCAPDAC
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 1 ERPGCAPD 8
ERPGC D
Sbjct: 1200 ERPGCKID 1207
>sp|NCAP_BCCV|NUCLEOPROTEIN Creek Canal orthohantavirus (BCCV)
Query: 4 GCAPDAC 10
CAPD C
Sbjct: 308 ACAPDRC 314
>sp|NCAP_ANDV|NUCLEOPROTEIN orthohantavirus (ANDV) (Andes virus)
Query: 4 GCAPDAC 10
CAPD C
Sbjct: 308 ACAPDRC 314
>sp|NCAP_SINV|NUCLEOPROTEIN Nombre orthohantavirus (SNV) (Sin
Query: 4 GCAPDAC 10
CAPD C
Sbjct: 308 ACAPDRC 314
>sp|NCAP_PUUMS|NUCLEOPROTEIN virus (strain Sotkamo/V-2969/81)
Query: 4 GCAPDAC 10
CAPD C
Sbjct: 313 ACAPDRC 319
>sp|NCAP_PUUMP|NUCLEOPROTEIN virus (strain P360)
Query: 4 GCAPDAC 10
CAPD C
Sbjct: 313 ACAPDRC 319
>sp|NCAP_PUUMU|NUCLEOPROTEIN virus (strain Udmurtia/894CG/91)
Query: 4 GCAPDAC 10
CAPD C
Sbjct: 313 ACAPDRC 319
>sp|NCAP_PUUME|NUCLEOPROTEIN virus (strain Evo/12CG/93)
Query: 4 GCAPDAC 10
CAPD C
Sbjct: 313 ACAPDRC 319
>sp|NCAP_PUUMG|NUCLEOPROTEIN virus (strain Bank vole/Russia/CG1820/1984)
Query: 4 GCAPDAC 10
CAPD C
Sbjct: 313 ACAPDRC 319
>sp|NCAP_PUUMB|NUCLEOPROTEIN virus (strain Berkel)
Query: 4 GCAPDAC 10
CAPD C
Sbjct: 270 ACAPDRC 276
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 2 RPGCAP 7
+PGCAP
Sbjct: 387 KPGCAP 392
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 RPGCAPDAC 10
RP C D C
Sbjct: 2033 RPKCMDDIC 2041
>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)
Query: 1 ERPGCAPDA 9
+RPG PDA
Sbjct: 433 QRPGPVPDA 441
>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)
Query: 2 RPGCAPD 8
RPG PD
Sbjct: 532 RPGLKPD 538
>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)
Query: 2 RPGCAPD 8
RPG PD
Sbjct: 532 RPGLKPD 538
>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)
Query: 2 RPGCAPD 8
RPG PD
Sbjct: 532 RPGLKPD 538
>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)
Query: 2 RPGCAPD 8
RPG PD
Sbjct: 532 RPGLKPD 538
>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)
Query: 2 RPGCAPD 8
RPG PD
Sbjct: 532 RPGLKPD 538
>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)
Query: 2 RPGCAPD 8
RPG PD
Sbjct: 532 RPGLKPD 538
>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 RPGCAPD 8
RPG PD
Sbjct: 532 RPGLKPD 538
>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 RPGCAPD 8
RPG PD
Sbjct: 532 RPGLKPD 538
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 PGCAPD 8
P C PD
Sbjct: 769 PNCPPD 774
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 RPGCAP 7
R GCAP
Sbjct: 1330 RAGCAP 1335
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 RPGCAP 7
R GCAP
Sbjct: 1330 RAGCAP 1335
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 RPGCAP 7
R GCAP
Sbjct: 1330 RAGCAP 1335
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 RPGCAPD 8
+PG PD
Sbjct: 933 KPGSGPD 939
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 RPGCAP 7
R GCAP
Sbjct: 1330 RAGCAP 1335
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 RPGCAP 7
R GCAP
Sbjct: 1330 RAGCAP 1335
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 3 PGCAP 7
PGC P
Sbjct: 262 PGCPP 266
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 3 PGCAP 7
PGC P
Sbjct: 262 PGCPP 266
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 3 PGCAP 7
PGC P
Sbjct: 262 PGCPP 266
>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4
Query: 2 RPGCAP 7
+PGC P
Sbjct: 381 KPGCVP 386
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 4 GCAPDAC 10
C PD C
Sbjct: 309 ACRPDRC 315
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 3 PGCAPDAC 10
PG P++C
Sbjct: 127 PGFPPESC 134
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 3 PGCAP 7
PGC P
Sbjct: 108 PGCVP 112
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 5 CAPDAC 10
C P AC
Sbjct: 1620 CQPGAC 1625
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RPGCAPDAC 10
R GC D C
Sbjct: 1041 RNGCLGDLC 1049
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 3 PGCAP 7
PGC P
Sbjct: 108 PGCVP 112
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 3 PGCAP 7
PGC P
Sbjct: 96 PGCVP 100
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 2 RPGCAPDAC 10
R GC D C
Sbjct: 718 RNGCLGDLC 726
>sp|MC007_MCV1|PROTEIN MC007|Molluscum contagiosum virus subtype 1
Query: 2 RPGCA 6
RPGCA
Sbjct: 25 RPGCA 29
>sp|VE6_HPVME|PROTEIN E6|Human papillomavirus type ME180
Query: 1 ERPGCAPDAC 10
ERP PD C
Sbjct: 9 ERPYKLPDLC 18
>sp|VE6_HPV68|PROTEIN E6|Human papillomavirus 68
Query: 1 ERPGCAPDAC 10
ERP PD C
Sbjct: 9 ERPYKLPDLC 18
>sp|VE6_HPV70|PROTEIN E6|Human papillomavirus type 70
Query: 1 ERPGCAPDAC 10
ERP PD C
Sbjct: 9 ERPYKLPDLC 18
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 PGCAP 7
PGC P
Sbjct: 224 PGCVP 228
>sp|VL2_HPV49|MINOR capsid protein L2|Human papillomavirus type 49
Query: 2 RPGCAPDA 9
RPG P+A
Sbjct: 88 RPGILPEA 95
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 PGCAP 7
PGC P
Sbjct: 224 PGCVP 228
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 PGCAP 7
PGC P
Sbjct: 224 PGCVP 228
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 RPGCAPDAC 10
RP AP C
Sbjct: 679 RPSWAPSVC 687
>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 PGCAPD 8
P C+PD
Sbjct: 239 PQCSPD 244
>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996
Query: 5 CAPDAC 10
C PD C
Sbjct: 124 CDPDKC 129
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PGCAPD 8
P C+PD
Sbjct: 239 PQCSPD 244
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 2 RPGCAP 7
RP C P
Sbjct: 1703 RPACVP 1708
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 PGCAP 7
PGC P
Sbjct: 224 PGCVP 228
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 PGCAP 7
PGC P
Sbjct: 224 PGCVP 228
>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PGCAPD 8
P C+PD
Sbjct: 239 PQCSPD 244
>sp|VE6_HPV39|PROTEIN E6|Human papillomavirus 39
Query: 1 ERPGCAPDAC 10
ERP PD C
Sbjct: 9 ERPYKLPDLC 18
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 GCAPDA 9
GC+PD+
Sbjct: 2375 GCSPDS 2380
42|SequenceR|215|206|GGCRFERPGC
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 GGCRFERPG 9
GGC + +PG
Sbjct: 5035 GGCYYVKPG 5043
Query: 3 CRFER 7
CRF+R
Sbjct: 4423 CRFQR 4427
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 GGCRFERPG 9
GGC + +PG
Sbjct: 5073 GGCYYVKPG 5081
Query: 3 CRFER 7
CRF+R
Sbjct: 4461 CRFQR 4465
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 GGCRFERPG 9
GGC + +PG
Sbjct: 5093 GGCYYVKPG 5101
Query: 3 CRFER 7
CRF+R
Sbjct: 4481 CRFQR 4485
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 GGCRFERPG 9
GGC + +PG
Sbjct: 5123 GGCYYVKPG 5131
Query: 3 CRFER 7
CRF+R
Sbjct: 4511 CRFQR 4515
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GGCRFERPGC 10
GGC F GC
Sbjct: 407 GGCVFSYVGC 416
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GGCRFERPGC 10
GGC F GC
Sbjct: 407 GGCVFSYVGC 416
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GGCRFERPGC 10
GGC F GC
Sbjct: 407 GGCVFAYVGC 416
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GGCRFERPGC 10
GGC F GC
Sbjct: 407 GGCVFAYVGC 416
>sp|VL2_HPV56|MINOR capsid protein L2|Human papillomavirus 56
Query: 1 GGCRFERPG 9
GG RF R G
Sbjct: 292 GGVRFSRLG 300
>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53
Query: 1 GGCRFERPG 9
GG RF R G
Sbjct: 292 GGVRFSRLG 300
>sp|VL2_HPV30|MINOR capsid protein L2|Human papillomavirus 30
Query: 1 GGCRFERPG 9
GG RF R G
Sbjct: 292 GGVRFSRLG 300
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 GCRFERPG 9
GC F PG
Sbjct: 979 GCGFAEPG 986
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 5 FERPG 9
FERPG
Sbjct: 28 FERPG 32
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 1 GGCRFERPGC 10
G CR P C
Sbjct: 600 GTCRILGPSC 609
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 GGCRFERPGC 10
G CR P C
Sbjct: 600 GTCRILGPSC 609
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 GGCRFERPGC 10
G CR P C
Sbjct: 600 GTCRILGPSC 609
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GGCRFERP 8
GG F+RP
Sbjct: 481 GGVGFDRP 488
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 3 CRFERP 8
C+F RP
Sbjct: 231 CQFSRP 236
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 3 CRFERP 8
C+F RP
Sbjct: 230 CQFSRP 235
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 GGCRFER 7
GG RFER
Sbjct: 862 GGLRFER 868
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 3 CRFER 7
CRFER
Sbjct: 116 CRFER 120
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 CRFERPG 9
C++E PG
Sbjct: 948 CQYEIPG 954
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 GGCRFERPGC 10
G CR P C
Sbjct: 599 GTCRILGPDC 608
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 GGCRFERPGC 10
G CR P C
Sbjct: 599 GTCRILGPDC 608
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 GGCRFERPGC 10
G CR P C
Sbjct: 599 GTCRILGPDC 608
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 3 CRFER 7
CRFER
Sbjct: 118 CRFER 122
>sp|UL136_HCMVT|PROTEIN UL136|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 GCRFE 6
GCRF+
Sbjct: 152 GCRFD 156
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GGCRFER 7
G CRF+R
Sbjct: 331 GLCRFDR 337
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GGCRFER 7
G CRF+R
Sbjct: 331 GLCRFDR 337
>sp|UL136_HCMVM|PROTEIN UL136|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GCRFE 6
GCRF+
Sbjct: 152 GCRFD 156
43|SequenceR|220|211|AGGGDGGCRF
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 GGGDGGCRF 10
GGGD C F
Sbjct: 295 GGGDNICIF 303
>sp|YVAP_VACCC|UNCHARACTERIZED 9.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GGGDGGC 8
G GDG C
Sbjct: 64 GAGDGNC 70
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 GGGDGG 7
GGDGG
Sbjct: 1027 AGGDGG 1032
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 GGGDGGCRF 10
GG +GG R+
Sbjct: 739 GGSNGGDRY 747
>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57
Query: 3 GGDGG 7
GGDGG
Sbjct: 204 GGDGG 208
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 GGDGG 7
GGDGG
Sbjct: 487 GGDGG 491
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 GGGDGGCR 9
G DG CR
Sbjct: 615 AGSDGPCR 622
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 GGGDGG 7
GGDGG
Sbjct: 1026 AGGDGG 1031
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 GGGDGG 7
GGDGG
Sbjct: 2517 AGGDGG 2522
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 4 GDGGCR 9
GDG CR
Sbjct: 1366 GDGVCR 1371
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 4 GDGGCR 9
GDG CR
Sbjct: 30 GDGVCR 35
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 4 GDGGCR 9
GDG CR
Sbjct: 1364 GDGVCR 1369
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 2 GGGDGG 7
GG DGG
Sbjct: 418 GGSDGG 423
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 AGGGDGGCRF 10
A GG G C+
Sbjct: 2438 ANGGKGFCKL 2447
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 AGGGDGGCRF 10
A GG G C+
Sbjct: 2438 ANGGKGFCKL 2447
>sp|U150A_HCMVM|UNCHARACTERIZED protein UL150A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GGDGGC 8
GGDG C
Sbjct: 249 GGDGEC 254
>sp|F_HCV1|F protein|Hepatitis C virus genotype 1a
Query: 1 AGGGDGGC 8
AGG DG C
Sbjct: 92 AGGRDGSC 99
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 GGDGGCR 9
G DG CR
Sbjct: 617 GSDGPCR 623
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 2 GGGDGGC 8
GGGD C
Sbjct: 305 GGGDSCC 311
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 2 GGGDGGC 8
GGGD C
Sbjct: 303 GGGDSCC 309
>sp|F_HCV77|F protein|Hepatitis C virus genotype 1a
Query: 1 AGGGDGGC 8
AGG DG C
Sbjct: 92 AGGRDGSC 99
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 5 DGGCR 9
+GGCR
Sbjct: 463 NGGCR 467
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 3 GGDGG 7
GGDGG
Sbjct: 500 GGDGG 504
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 AGGGDGGCR 9
A GG G C+
Sbjct: 2415 ANGGRGFCK 2423
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 AGGGDGGCR 9
A GG G C+
Sbjct: 2415 ANGGRGFCK 2423
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 GGDGGCR 9
G DG C+
Sbjct: 624 GSDGSCK 630
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 GDGGCR 9
GDG CR
Sbjct: 2023 GDGICR 2028
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 3 GGDGGCR 9
GG G C+
Sbjct: 150 GGSGACK 156
>sp|EP84_HCMVM|EARLY phosphoprotein p84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GGDGGCR 9
GG GG R
Sbjct: 167 GGSGGTR 173
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 GGGDGGCRF 10
GGD C F
Sbjct: 311 AGGDNVCIF 319
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 4 GDGGC 8
DGGC
Sbjct: 1301 ADGGC 1305
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 GDGGC 8
DGGC
Sbjct: 1301 ADGGC 1305
>sp|EP84_HCMVA|EARLY phosphoprotein p84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GGDGGCR 9
GG GG R
Sbjct: 167 GGSGGTR 173
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 GDGGC 8
DGGC
Sbjct: 1305 ADGGC 1309
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 GDGGC 8
DGGC
Sbjct: 1301 ADGGC 1305
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 GDGGC 8
DGGC
Sbjct: 1301 ADGGC 1305
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 GDGGC 8
DGGC
Sbjct: 1305 ADGGC 1309
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 GDGGC 8
DGGC
Sbjct: 1301 ADGGC 1305
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 GDGGC 8
DGGC
Sbjct: 1305 ADGGC 1309
44|SequenceR|225|216|REPICAGGGD
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 5 CAGGG 9
CAGGG
Sbjct: 1631 CAGGG 1635
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 1 REPICAGGGD 10
+ P+C GD
Sbjct: 171 KAPVCDNAGD 180
>sp|US13_HCMVM|MEMBRANE protein US13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 REPICAGGG 9
R C GGG
Sbjct: 251 RSSYCEGGG 259
>sp|US13_HCMVA|UNCHARACTERIZED protein HVLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 REPICAGGG 9
R C GGG
Sbjct: 251 RSSYCEGGG 259
>sp|NEF_HV1YF|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 PICAGGGD 10
PIC G D
Sbjct: 173 PICQHGAD 180
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 REPICAGGG 9
REP+ G G
Sbjct: 929 REPVKPGSG 937
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 2 EPICAG 7
+PIC+G
Sbjct: 58 QPICSG 63
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 1 REPICAGGG 9
REP+ G G
Sbjct: 926 REPVKLGSG 934
>sp|VL2_HPV54|MINOR capsid protein L2|Human papillomavirus type 54
Query: 1 REPICAGGGD 10
+ PI GGD
Sbjct: 433 QTPIAVNGGD 442
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 5 CAGGGD 10
CA GGD
Sbjct: 672 CAAGGD 677
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 5 CAGGGD 10
CA GGD
Sbjct: 672 CAAGGD 677
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 REPICAGGG 9
R+ +C G G
Sbjct: 1653 RDALCGGDG 1661
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 EPICAG 7
+P+C+G
Sbjct: 1409 DPLCSG 1414
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 EPICAG 7
+P+C+G
Sbjct: 1409 DPLCSG 1414
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 EPICAG 7
+P+C+G
Sbjct: 1409 DPLCSG 1414
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 EPICAG 7
+P+C+G
Sbjct: 1409 DPLCSG 1414
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 EPICAG 7
+P+C+G
Sbjct: 1409 DPLCSG 1414
>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)
Query: 3 PICAGGG 9
P+C GG
Sbjct: 51 PVCMFGG 57
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 5 CAGGG 9
C GGG
Sbjct: 155 CGGGG 159
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 5 CAGGG 9
C GGG
Sbjct: 158 CGGGG 162
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 1 REPICAGGGD 10
RE +C G G+
Sbjct: 614 RECVCPGSGE 623
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 REPICAGGG 9
R+ +C G G
Sbjct: 1653 RDVLCGGDG 1661
45|SequenceR|230|221|RDCVWREPIC
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 RDCVWREPI 9
R C+W EPI
Sbjct: 419 RPCLWVEPI 427
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 4 VWREPIC 10
VW++P+C
Sbjct: 450 VWKKPLC 456
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 4 VWREPIC 10
VW++P+C
Sbjct: 450 VWKKPLC 456
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 2 DCVWREPIC 10
DCV P+C
Sbjct: 365 DCVRSVPVC 373
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 2 DCVWREPIC 10
DCV P+C
Sbjct: 365 DCVRSVPVC 373
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 RDCVWRE 7
++CVW++
Sbjct: 889 QNCVWKD 895
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DCVWREPIC 10
DCV P+C
Sbjct: 362 DCVRPVPVC 370
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 DCVWRE 7
DC WR+
Sbjct: 545 DCYWRK 550
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 DCVWRE 7
DC WR+
Sbjct: 545 DCYWRK 550
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 2 DCVWREPI 9
+ VW EP+
Sbjct: 409 NVVWTEPL 416
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 1 RDCVWREPI 9
R C+W + +
Sbjct: 8 RSCLWTQSL 16
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 RDCVWRE 7
++CVW +
Sbjct: 890 QNCVWED 896
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 RDCVWRE 7
++CVW +
Sbjct: 886 QNCVWED 892
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 RDCVWRE 7
++CVW +
Sbjct: 879 QNCVWED 885
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 RDCVWRE 7
++CVW +
Sbjct: 879 QNCVWED 885
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 RDCVWRE 7
++CVW +
Sbjct: 878 QNCVWED 884
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 RDCVWRE 7
++CVW +
Sbjct: 888 QNCVWED 894
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 RDCVWRE 7
++CVW +
Sbjct: 896 QNCVWED 902
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 RDCVWREPI 9
R C +EPI
Sbjct: 1877 RQCKLQEPI 1885
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 RDCVWRE 7
++CVW +
Sbjct: 882 QNCVWED 888
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 3 CVWREPI 9
C+ R+P+
Sbjct: 314 CILRDPV 320
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 2 DCVWREPI 9
DC +R P+
Sbjct: 504 DCKYRAPM 511
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 RDCVWRE 7
++CVW +
Sbjct: 891 QNCVWED 897
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 2 DCVW 5
DCVW
Sbjct: 900 DCVW 903
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VWREP 8
VW+EP
Sbjct: 45 VWKEP 49
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 5 WREPIC 10
W +P+C
Sbjct: 507 WLQPLC 512
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 CVWREPIC 10
CV P+C
Sbjct: 5382 CVDHRPVC 5389
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DCVWRE 7
DC W E
Sbjct: 1961 DCQWDE 1966
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 RDCVWRE 7
R C W E
Sbjct: 1007 RSCTWPE 1013
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 5 WREPIC 10
W +P+C
Sbjct: 504 WLQPLC 509
>sp|NEF_HV1S3|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 DCVWRE 7
DC W E
Sbjct: 53 DCAWLE 58
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 VWREPI 9
+WR P+
Sbjct: 517 LWRRPV 522
>sp|NEF_HV1Z2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 DCVWRE 7
DC W E
Sbjct: 54 DCAWLE 59
>sp|NEF_HV1S1|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 DCVWRE 7
DC W E
Sbjct: 56 DCAWLE 61
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 VWREPI 9
+WR P+
Sbjct: 515 LWRRPV 520
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 VWREPI 9
+WR P+
Sbjct: 517 LWRRPV 522
>sp|NEF_HV1LW|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 DCVWRE 7
DC W E
Sbjct: 54 DCAWLE 59
>sp|ORF23_TTVV7|PROBABLE protein VP2|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 4 VWREPI 9
+WR P+
Sbjct: 3 IWRPPL 8
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 RDCVWRE 7
++C+W +
Sbjct: 898 QNCIWED 904
>sp|NEF_HV1B8|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 DCVWRE 7
DC W E
Sbjct: 54 DCAWLE 59
>sp|NEF_HV1MN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 DCVWRE 7
DC W E
Sbjct: 56 DCAWLE 61
>sp|NEF_HV1LA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 DCVWRE 7
DC W E
Sbjct: 54 DCAWLE 59
>sp|NEF_HV1JR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 DCVWRE 7
DC W E
Sbjct: 64 DCAWLE 69
>sp|NEF_HV1BN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 DCVWRE 7
DC W E
Sbjct: 66 DCAWLE 71
>sp|NEF_HV1A2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 DCVWRE 7
DC W E
Sbjct: 58 DCAWLE 63
>sp|NEF_HV192|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 DCVWRE 7
DC W E
Sbjct: 53 DCAWLE 58
46|SequenceR|235|226|ECDFQRDCVW
>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)
Query: 2 CDFQRDC 8
CD Q DC
Sbjct: 60 CDMQTDC 66
>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CDFQRDC 8
CD Q DC
Sbjct: 58 CDMQTDC 64
>sp|NSS_TOSV|NON-STRUCTURAL protein NS-S|Toscana virus (Tos)
Query: 3 DFQRDC 8
DF++DC
Sbjct: 33 DFEKDC 38
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 DFQRDC 8
DF+R+C
Sbjct: 184 DFEREC 189
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DFQRDC 8
DF+R+C
Sbjct: 184 DFEREC 189
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 2 CDFQRDC 8
CD RDC
Sbjct: 293 CDGDRDC 299
>sp|PG181_VARV|PROTEIN OPG181|Variola virus
Query: 2 CDFQRDCV 9
CD R C+
Sbjct: 271 CDMNRHCI 278
>sp|PG181_VAR67|PROTEIN OPG181|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 CDFQRDCV 9
CD R C+
Sbjct: 271 CDMNRHCI 278
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 3 DFQRDCV 9
DF+R+C+
Sbjct: 55 DFKRECL 61
>sp|PG181_VACCC|PROTEIN OPG181|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CDFQRDCV 9
CD R C+
Sbjct: 271 CDMNRHCI 278
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 4 FQRDC 8
FQ+DC
Sbjct: 1396 FQKDC 1400
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 2 CDFQRDC 8
CD + DC
Sbjct: 272 CDIEVDC 278
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 2 CDFQRDC 8
CD + DC
Sbjct: 272 CDIEVDC 278
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 FQRDC 8
FQ+DC
Sbjct: 1381 FQKDC 1385
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 4 FQRDC 8
FQ+DC
Sbjct: 1396 FQKDC 1400
>sp|PG181_VACCA|PROTEIN OPG181|Vaccinia virus (strain Ankara) (VACV)
Query: 2 CDFQRDCV 9
CD R C+
Sbjct: 267 CDMNRHCI 274
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 4 FQRDC 8
FQ+DC
Sbjct: 1379 FQKDC 1383
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 FQRDC 8
FQ+DC
Sbjct: 1381 FQKDC 1385
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 FQRDC 8
FQ+DC
Sbjct: 1381 FQKDC 1385
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 FQRDC 8
FQ+DC
Sbjct: 1381 FQKDC 1385
>sp|CEP1_HHV11|CYTOPLASMIC envelopment protein 1|Human herpesvirus 1 (strain 17)
Query: 2 CDFQRDCVW 10
C F R C W
Sbjct: 183 CLFLRSCHW 191
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 FQRDC 8
FQ+DC
Sbjct: 1381 FQKDC 1385
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 4 FQRDC 8
FQ+DC
Sbjct: 1395 FQKDC 1399
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 DFQRDCVW 10
DFQ VW
Sbjct: 1852 DFQGKTVW 1859
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 ECDFQRD 7
EC +RD
Sbjct: 1462 ECSIERD 1468
>sp|E4RF4_ADE02|EARLY 4 ORF4 protein|Human adenovirus C serotype 2
Query: 2 CDFQRDCV 9
CD Q +CV
Sbjct: 12 CDSQNECV 19
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 ECDFQRD 7
EC +RD
Sbjct: 1455 ECQIERD 1461
47|SequenceR|240|231|EDSRDECDFQ
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 EDSRDECD 8
E+S DECD
Sbjct: 967 EESTDECD 974
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 EDSRDECD 8
E+S DECD
Sbjct: 967 EESTDECD 974
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 EDSRDECD 8
E+S DECD
Sbjct: 967 EESTDECD 974
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 EDSRDECD 8
E+S DECD
Sbjct: 895 EESTDECD 902
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 EDSRDECD 8
E+S DECD
Sbjct: 967 EESTDECD 974
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 EDSRDECD 8
E+S DECD
Sbjct: 967 EESTDECD 974
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 EDSRDECD 8
E+S DECD
Sbjct: 967 EESTDECD 974
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 2 DSRDECDF 9
+SRD+ DF
Sbjct: 575 NSRDDTDF 582
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 DSRDECDFQ 10
D+R CD+Q
Sbjct: 2096 DARVCCDYQ 2104
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 RDECDFQ 10
+D CDF+
Sbjct: 394 QDSCDFK 400
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 1 EDSRDE 6
ED+RDE
Sbjct: 534 EDARDE 539
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 RDECDFQ 10
+D CDF+
Sbjct: 394 QDSCDFK 400
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 2 DSRDECD 8
DSR +C+
Sbjct: 39 DSRSDCN 45
>sp|HEMA_CVHN2|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N2)
Query: 2 DSRDECD 8
DSR +C+
Sbjct: 33 DSRSDCN 39
>sp|HEMA_CVHN5|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N5)
Query: 2 DSRDECD 8
DSR +C+
Sbjct: 33 DSRSDCN 39
>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus
Query: 2 DSRDEC 7
D RD+C
Sbjct: 209 DKRDDC 214
>sp|HEMA_CVHN1|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N1)
Query: 2 DSRDECD 8
DSR +C+
Sbjct: 33 DSRSDCN 39
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 1 EDSRDECD 8
ED DE D
Sbjct: 679 EDENDEVD 686
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 5 DECDF 9
D CDF
Sbjct: 368 DNCDF 372
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 5 DECDF 9
D CDF
Sbjct: 368 DNCDF 372
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 DECDF 9
D CDF
Sbjct: 368 DNCDF 372
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 5 DECDF 9
D CDF
Sbjct: 368 DNCDF 372
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 5 DECDF 9
D CDF
Sbjct: 368 DNCDF 372
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 DECDF 9
D CDF
Sbjct: 368 DNCDF 372
48|SequenceR|245|236|CLEAAEDSRD
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 3 EAAEDSRD 10
+ AEDSRD
Sbjct: 145 DTAEDSRD 152
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 CLEAAED 7
CLE ED
Sbjct: 1777 CLEPGED 1783
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 CLEAAED 7
CLE ED
Sbjct: 1777 CLEPGED 1783
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 CLEAAED 7
CLE ED
Sbjct: 1777 CLEPGED 1783
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CLEAAEDSRD 10
C A+D RD
Sbjct: 695 CYHIADDGRD 704
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CLEAAEDSRD 10
CL+ AE+ R+
Sbjct: 6378 CLKHAEEYRE 6387
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CLEAAEDSRD 10
CL A + S+D
Sbjct: 303 CLRAEQASQD 312
49|SequenceR|250|241|PGPRGCLEAA
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 1 PGPRGCLEA 9
PGP GCL++
Sbjct: 146 PGPGGCLQS 154
>sp|TRX2_HHV8P|TRIPLEX capsid protein 2|Human herpesvirus 8 type P
Query: 3 PRGCL 7
PRGCL
Sbjct: 219 PRGCL 223
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PGPRGCLEA 9
PGPR C ++
Sbjct: 231 PGPRTCKDS 239
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 3 PRGCLEA 9
P GC+E+
Sbjct: 238 PNGCIES 244
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 PGPRGCLEA 9
P GCLEA
Sbjct: 2139 PENLGCLEA 2147
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 PGPRGCLEA 9
P GCLEA
Sbjct: 2139 PENLGCLEA 2147
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 234 PNGCIEG 240
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 215 PNGCIEG 221
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 231 PNGCIEG 237
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 231 PNGCIEG 237
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 3 PRGCLEA 9
P GC+E
Sbjct: 238 PNGCIEG 244
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PRGC 6
PRGC
Sbjct: 696 PRGC 699
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 PGPRGCLEA 9
P P+ CL+
Sbjct: 1512 PSPKPCLKG 1520
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 PRGCLE 8
P GC+E
Sbjct: 2948 PSGCVE 2953
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 PRGCLE 8
P GC+E
Sbjct: 2948 PSGCVE 2953
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 PGPRGC 6
P PRGC
Sbjct: 1029 PEPRGC 1034
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 PGPRGC 6
P PRGC
Sbjct: 1029 PEPRGC 1034
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 PGPRGC 6
P PRGC
Sbjct: 1029 PEPRGC 1034
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 PGPRGC 6
P PRGC
Sbjct: 1029 PEPRGC 1034
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 PGPRGC 6
P PRGC
Sbjct: 1029 PEPRGC 1034
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 PGPRGC 6
P PRGC
Sbjct: 1029 PEPRGC 1034
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 PGPRGC 6
P PRGC
Sbjct: 1029 PEPRGC 1034
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PRGCLE 8
P GCL+
Sbjct: 54 PEGCLQ 59
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 PGPRGCLEAA 10
P P CLE A
Sbjct: 2067 PFPIDCLELA 2076
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 PGPRGCLEAA 10
P P CLE A
Sbjct: 2067 PFPIDCLELA 2076
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 PGPRGCLEAA 10
P P CLE A
Sbjct: 2067 PFPIDCLELA 2076
>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)
Query: 1 PGPRGCLE 8
PG CLE
Sbjct: 180 PGNPNCLE 187
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 1 PGPRGCLE 8
PG CLE
Sbjct: 180 PGNPNCLE 187
>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PGPRGCLE 8
PG CLE
Sbjct: 180 PGNPNCLE 187
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PGPRGCLE 8
PG CLE
Sbjct: 180 PGNPNCLE 187
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 1 PGPRGCLE 8
PG CLE
Sbjct: 180 PGNPNCLE 187
50|SequenceR|255|246|ASTAGPGPRG
>sp|NEF_HV1M2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 TAGPGPR 9
T GPGPR
Sbjct: 123 TPGPGPR 129
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 TAGPGPR 9
T GPGP+
Sbjct: 1183 TLGPGPQ 1189
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 TAGPGPR 9
T GPGP+
Sbjct: 1183 TLGPGPQ 1189
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 STAGPGP 8
+TAGPGP
Sbjct: 103 ATAGPGP 109
>sp|NEF_HV1MV|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 TAGPGPR 9
T GPGPR
Sbjct: 133 TPGPGPR 139
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 TAGPGPRG 10
T G GP G
Sbjct: 416 TGGDGPEG 423
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 TAGPGPRG 10
T G GP G
Sbjct: 416 TGGDGPEG 423
>sp|NEF_HV1JR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 TAGPGPR 9
TAGPG R
Sbjct: 138 TAGPGVR 144
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AGPGPRG 10
AGP P G
Sbjct: 216 AGPAPPG 222
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 2 STAGPGPRG 10
S + PGP G
Sbjct: 66 SESRPGPSG 74
51|SequenceR|260|251|ACAAPASTAG
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 ACAAPASTA 9
AC P STA
Sbjct: 184 ACCLPVSTA 192
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 ACAAPASTA 9
AC P STA
Sbjct: 184 ACCLPVSTA 192
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 1 ACAAPASTA 9
AC P STA
Sbjct: 184 ACCLPVSTA 192
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 ACAAPASTA 9
AC P STA
Sbjct: 184 ACCLPVSTA 192
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 1 ACAAPASTA 9
AC P STA
Sbjct: 184 ACCLPVSTA 192
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 1 ACAAPASTA 9
AC P STA
Sbjct: 184 ACCLPVSTA 192
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 1 ACAAPAST 8
CA PAS+
Sbjct: 196 GCADPASS 203
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 3 AAPASTA 9
AAPAST+
Sbjct: 484 AAPASTS 490
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CAAPASTAG 10
C+A A+T+G
Sbjct: 892 CSAAAATSG 900
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CAAPASTAG 10
C+A A+T+G
Sbjct: 892 CSAAAATSG 900
52|SequenceR|265|256|FQSATACAAP
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 FQSATACA 8
+ +ATACA
Sbjct: 2816 YWAATACA 2823
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 FQSATACAAP 10
F+ ATA AP
Sbjct: 757 FRVATASTAP 766
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SATACAA 9
SATAC A
Sbjct: 442 SATACTA 448
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 SATACAA 9
SATAC A
Sbjct: 432 SATACTA 438
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 FQSATACAAP 10
F+ ATA AP
Sbjct: 757 FRVATASTAP 766
53|SequenceR|270|261|GSRCAFQSAT
>sp|NEC2_HHV11|NUCLEAR egress protein 2|Human herpesvirus 1 (strain 17)
Query: 2 SRCAFQ 7
SRCAFQ
Sbjct: 48 SRCAFQ 53
>sp|NEC2_HHV2H|NUCLEAR egress protein 2|Human herpesvirus 2 (strain HG52)
Query: 2 SRCAFQ 7
SRCAFQ
Sbjct: 48 SRCAFQ 53
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 3 RCAFQS 8
RC FQS
Sbjct: 583 RCPFQS 588
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 4 CAFQS 8
CAFQS
Sbjct: 638 CAFQS 642
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 4 CAFQS 8
CAFQS
Sbjct: 638 CAFQS 642
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 4 CAFQS 8
CAFQS
Sbjct: 638 CAFQS 642
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 4 CAFQS 8
CAFQS
Sbjct: 638 CAFQS 642
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 4 CAFQS 8
CAFQS
Sbjct: 638 CAFQS 642
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 4 CAFQS 8
CAFQS
Sbjct: 638 CAFQS 642
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 4 CAFQS 8
CAFQS
Sbjct: 638 CAFQS 642
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 4 CAFQS 8
CAFQS
Sbjct: 637 CAFQS 641
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 4 CAFQS 8
CAFQS
Sbjct: 636 CAFQS 640
54|SequenceR|275|266|LHVCEGSRCA
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 LHVCEGSRC 9
LH+C+G +C
Sbjct: 677 LHLCKGFQC 685
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 1 LHVCEGSRC 9
LH+C+G +C
Sbjct: 673 LHLCKGFQC 681
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 1 LHVCEGSRC 9
H+C+G +C
Sbjct: 670 FHICKGFQC 678
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 LHVCEGSR 8
L +CEG R
Sbjct: 1912 LEICEGKR 1919
Query: 1 LHVCEGSR 8
L +CEG R
Sbjct: 2074 LEICEGKR 2081
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 LHVCEGSR 8
L +CEG R
Sbjct: 1912 LEICEGKR 1919
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 VCEGSRCA 10
VCEGS+ A
Sbjct: 587 VCEGSKFA 594
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 VCEGSRCA 10
VCEGS+ A
Sbjct: 587 VCEGSKFA 594
>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 VCEGSRC 9
VC SRC
Sbjct: 456 VCNCSRC 462
>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 VCEGSRC 9
VC SRC
Sbjct: 456 VCNCSRC 462
>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)
Query: 3 VCEGSRC 9
VC SRC
Sbjct: 455 VCNCSRC 461
>sp|UL92_EBVB9|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain B95-8)
Query: 2 HVCEGS 7
HVC+GS
Sbjct: 53 HVCDGS 58
>sp|UL92_EBVA8|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain AG876)
Query: 2 HVCEGS 7
HVC+GS
Sbjct: 53 HVCDGS 58
>sp|UL20_HCMVM|MEMBRANE protein UL20|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HVCEGS 7
H CEG+
Sbjct: 120 HTCEGT 125
>sp|UL24_HHV8P|PROTEIN UL24 homolog|Human herpesvirus 8 type P
Query: 1 LHVCEGSRCA 10
+H EG CA
Sbjct: 165 VHTTEGKLCA 174
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 HVCEGS 7
H+C+GS
Sbjct: 589 HMCKGS 594
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 1 LHVCEGSRC 9
L +CE S C
Sbjct: 616 LSLCEESTC 624
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 4 CEGSRCA 10
C GS CA
Sbjct: 15 CFGSTCA 21
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 CEGSRCA 10
C GS CA
Sbjct: 15 CFGSTCA 21
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 LHVCEGSR 8
+H C G+R
Sbjct: 544 VHPCPGAR 551
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 LHVCEGSRC 9
LH+ GS C
Sbjct: 1371 LHLHTGSSC 1379
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 LHVCEGSRC 9
LH+ GS C
Sbjct: 1371 LHLHTGSSC 1379
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 LHVCEGSRC 9
LH+ GS C
Sbjct: 1371 LHLHTGSSC 1379
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 HVCEGS 7
+VC+GS
Sbjct: 1600 YVCDGS 1605
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 HVCEGS 7
+VC+GS
Sbjct: 1630 YVCDGS 1635
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 HVCEGS 7
+VC+GS
Sbjct: 1580 YVCDGS 1585
55|SequenceR|280|271|DCRWGLHVCE
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 1 DCRWGL 6
DC+WG+
Sbjct: 275 DCKWGV 280
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 CRWGLHVCE 10
CR G++ CE
Sbjct: 936 CRCGVYYCE 944
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 1 DCRWGL 6
DC+WG+
Sbjct: 261 DCKWGV 266
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 2 CRWGLHVC 9
C+W H+C
Sbjct: 404 CQWIKHIC 411
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 2 CRWGLHVC 9
C +G HVC
Sbjct: 1161 CDYGAHVC 1168
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 2 CRWGL 6
CRWG+
Sbjct: 252 CRWGM 256
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 2 CRWGL 6
CRWG+
Sbjct: 269 CRWGM 273
>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26
Query: 3 RWGLHVC 9
+W +HVC
Sbjct: 183 QWAVHVC 189
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 3 RWGLHVC 9
RW L +C
Sbjct: 422 RWTLEIC 428
>sp|VE2_HPV17|REGULATORY protein E2|Human papillomavirus 17
Query: 3 RWGLHVCE 10
RW +HV E
Sbjct: 184 RWEVHVNE 191
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 RWGLHVCE 10
RW VCE
Sbjct: 1087 RWPADVCE 1094
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 1 DCRWGL 6
DC WG+
Sbjct: 262 DCAWGV 267
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 DCRWGL 6
DC+W L
Sbjct: 6917 DCQWDL 6922
Query: 1 DCRWGL 6
DC W L
Sbjct: 4101 DCNWPL 4106
>sp|VIF_HV1MN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 2 CRWGL 6
C+WG+
Sbjct: 270 CKWGM 274
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 RWGLHV 8
+WG+H+
Sbjct: 511 KWGVHL 516
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RWGLHV 8
+WG+H+
Sbjct: 511 KWGVHL 516
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 DCRWGLHV 8
+C W HV
Sbjct: 3346 NCAWDYHV 3353
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 DCRWGLHV 8
+C W HV
Sbjct: 3346 NCAWDYHV 3353
>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|VIF_HV1ND|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|VIF_HV1B9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40
Query: 4 WGLHVCE 10
W + +CE
Sbjct: 214 WEMQICE 220
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 4 WGLHVCE 10
W + +CE
Sbjct: 217 WEMQICE 223
>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7
Query: 4 WGLHVCE 10
W + +CE
Sbjct: 215 WEMQICE 221
>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5
Query: 4 WGLHVCE 10
W + +CE
Sbjct: 215 WEMQICE 221
>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2
Query: 4 WGLHVCE 10
W + +CE
Sbjct: 215 WEMQICE 221
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 3 RWGLHVC 9
RW +VC
Sbjct: 526 RWKWYVC 532
>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|VIF_HV1N5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|VIF_HV1EL|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 3 RWGLHVC 9
+W +HVC
Sbjct: 183 QWDVHVC 189
>sp|VIF_HV1RH|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|VIF_HV1Z6|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|VIF_HV19N|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHAGE 76
>sp|VIF_HV1Z2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|VIF_HV1M2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 71 WGLHTGE 77
>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|VIF_HV1V9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|VIF_HV1LW|TRUNCATED virion infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|VIF_HV1SE|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|VIF_HV1OY|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|VIF_HV1MP|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 71 WGLHTGE 77
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 DCRWGL 6
DC W L
Sbjct: 6954 DCHWDL 6959
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 DCRWGL 6
DC W L
Sbjct: 6974 DCHWDL 6979
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 DCRWGL 6
DC W L
Sbjct: 7004 DCHWDL 7009
>sp|VIF_HV1JR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 WGLHVCE 10
WGLH E
Sbjct: 70 WGLHTGE 76
>sp|VE2_HPV37|REGULATORY protein E2|Human papillomavirus 37
Query: 3 RWGLHV 8
RW +HV
Sbjct: 184 RWEVHV 189
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 DCRWGL 6
DC W L
Sbjct: 4101 DCNWPL 4106
>sp|ICP22_HHV11|TRANSCRIPTIONAL regulator ICP22|Human herpesvirus 1 (strain 17)
Query: 4 WGLHV 8
WG+H+
Sbjct: 251 WGMHL 255
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 CRWGL 6
CRW L
Sbjct: 3155 CRWWL 3159
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 CRWGL 6
CRW L
Sbjct: 3155 CRWWL 3159
56|SequenceR|285|276|CDRDGDCRWG
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 4 DGDCRWG 10
DGD +WG
Sbjct: 549 DGDSQWG 555
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 2 DRDGDCRWG 10
DR+G CR G
Sbjct: 456 DRNGACRCG 464
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 6 DCRWG 10
DC+WG
Sbjct: 275 DCKWG 279
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 4 DGDCRWG 10
DGD WG
Sbjct: 549 DGDILWG 555
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 6 DCRWG 10
DC+WG
Sbjct: 261 DCKWG 265
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 DGDCRW 9
D DC+W
Sbjct: 1959 DPDCQW 1964
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 1 CDRDGDC 7
CD D DC
Sbjct: 293 CDGDRDC 299
>sp|YM2_DHVI1|PUTATIVE uncharacterized protein M2|Dhori virus (strain Indian/1313/61)
Query: 1 CDRDGDCRWG 10
C R+GD R G
Sbjct: 31 CGREGDLRAG 40
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 3 RDGDC 7
+DGDC
Sbjct: 178 KDGDC 182
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 DRDGDCR 8
D DGDCR
Sbjct: 696 DLDGDCR 702
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DRDGDCR 8
D DGDCR
Sbjct: 696 DLDGDCR 702
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DRDGDCR 8
D DGDCR
Sbjct: 696 DLDGDCR 702
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 DRDGD 6
DRDGD
Sbjct: 1936 DRDGD 1940
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 3 RDGDCRWG 10
+DG WG
Sbjct: 728 KDGSISWG 735
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 3 RDGDCRWG 10
+DG WG
Sbjct: 728 KDGSISWG 735
>sp|ARBH_HHV8P|APOPTOSIS regulator Bcl-2 homolog|Human herpesvirus 8 type P
Query: 4 DGDCRWG 10
DG+ WG
Sbjct: 79 DGNMNWG 85
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 RDGDCRWG 10
R+G+ WG
Sbjct: 1330 RNGEGSWG 1337
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 RDGDCRWG 10
R+G+ WG
Sbjct: 1330 RNGEGSWG 1337
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 RDGDCRWG 10
R+G+ WG
Sbjct: 1330 RNGEGSWG 1337
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 RDGDCRWG 10
R+G+ WG
Sbjct: 1330 RNGEGSWG 1337
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 RDGDCRWG 10
R+G+ WG
Sbjct: 1330 RNGEGSWG 1337
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 1 CDRDGDCRWG 10
C DG WG
Sbjct: 499 CGGDGGAFWG 508
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 2 DRDGDC 7
DR+G C
Sbjct: 1129 DREGQC 1134
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 2 DRDGDC 7
DR+G C
Sbjct: 1129 DREGQC 1134
>sp|PP71_HCMVM|PROTEIN pp71|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DRDGDCR 8
D DGD R
Sbjct: 518 DMDGDVR 524
>sp|PP71_HCMVA|PROTEIN pp71|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DRDGDCR 8
D DGD R
Sbjct: 518 DMDGDVR 524
>sp|M21_HMPVC|PROTEIN M2-1|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 CDRDGDCRW 9
C+R +C++
Sbjct: 15 CNRGSECKF 23
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 6 DCRWG 10
DC WG
Sbjct: 262 DCAWG 266
>sp|VE2_HPV56|REGULATORY protein E2|Human papillomavirus 56
Query: 4 DGDCRW 9
+GDC W
Sbjct: 83 NGDCGW 88
>sp|VE2_HPV63|REGULATORY protein E2|Human papillomavirus type 63
Query: 3 RDGDCRW 9
++GD RW
Sbjct: 140 QNGDNRW 146
>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)
Query: 1 CDRDGDC 7
CD DC
Sbjct: 60 CDMQTDC 66
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 6 DCRW 9
DC+W
Sbjct: 6917 DCQW 6920
>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CDRDGDC 7
CD DC
Sbjct: 58 CDMQTDC 64
>sp|UL92_HCMVM|UNCHARACTERIZED protein UL92|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CDRDGDC 7
CD G C
Sbjct: 2 CDASGAC 8
>sp|UL92_HCMVA|PROTEIN UL92|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CDRDGDC 7
CD G C
Sbjct: 2 CDASGAC 8
>sp|BEL1_SFV3L|PROTEIN Bel-1|Simian foamy virus type 3
Query: 2 DRDGDCRWG 10
DR RWG
Sbjct: 215 DRPKRSRWG 223
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 2 DRDGDC 7
DR+G C
Sbjct: 1120 DREGHC 1125
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 DGDCRWG 10
+ +C WG
Sbjct: 460 NNECPWG 466
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 DGDCRWG 10
+ +C WG
Sbjct: 460 NNECPWG 466
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 DGDCRWG 10
+ +C WG
Sbjct: 460 NNECPWG 466
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 DGDCRWG 10
+ +C WG
Sbjct: 460 NNECPWG 466
>sp|VPU_HV1YF|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 2 DRDGDCRW 9
+ DGD W
Sbjct: 53 ESDGDAEW 60
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 DGDCRWG 10
+ +C WG
Sbjct: 460 NNECPWG 466
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 DGDCRWG 10
+ +C WG
Sbjct: 460 NNECPWG 466
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 DGDCRWG 10
+ +C WG
Sbjct: 460 NNECPWG 466
57|SequenceR|290|281|DSKDKCDRDG
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 DSKDKCDRDG 10
D+K+ DRDG
Sbjct: 1596 DAKELIDRDG 1605
>sp|POLG_ECHO9|GENOME polyprotein|Echo 9 virus (EV-9) (Coxsackievirus
Query: 1 DSKDKCDRDG 10
D+K+ D+DG
Sbjct: 80 DAKELVDKDG 89
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 DSKDKCDRDG 10
D+K+ D+DG
Sbjct: 1607 DAKELVDKDG 1616
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 DSKDKCDRDG 10
D+K+ D+DG
Sbjct: 1606 DAKELVDKDG 1615
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 DSKDKCDRDG 10
D+K+ D+DG
Sbjct: 1608 DAKELVDKDG 1617
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 DSKDKCDRDG 10
D+K+ D+DG
Sbjct: 1606 DAKELVDKDG 1615
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 DSKDKCDRDG 10
D+K+ D+DG
Sbjct: 1616 DAKELVDKDG 1625
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 DSKDKCDRDG 10
D+K+ D+DG
Sbjct: 1604 DAKELVDKDG 1613
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 DSKDKCDRDG 10
D+K+ D+DG
Sbjct: 1609 DAKELVDKDG 1618
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 DSKDKCDRDG 10
D+K+ D+DG
Sbjct: 1597 DAKELVDKDG 1606
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 DSKDKCDRDG 10
D+K+ D+DG
Sbjct: 1597 DAKELVDKDG 1606
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 DSKDKCDRDG 10
D+K+ D+DG
Sbjct: 1598 DAKELVDKDG 1607
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 DSKDKCDRDG 10
D+K+ D+DG
Sbjct: 1596 DAKELVDKDG 1605
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 DSKDKCDRDG 10
D+K+ D+DG
Sbjct: 1598 DAKELVDKDG 1607
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 DSKDKCDRDG 10
D+K+ D+DG
Sbjct: 1598 DAKELVDKDG 1607
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 DSKDKCDRDG 10
D+K+ D+DG
Sbjct: 1600 DAKELVDKDG 1609
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 DSKDKCDRDG 10
D+K+ D+DG
Sbjct: 1595 DAKELVDKDG 1604
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 DSKDKCDRDG 10
D+K+ D+DG
Sbjct: 1614 DAKELVDKDG 1623
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 SKDKCD 7
SK+KCD
Sbjct: 1404 SKEKCD 1409
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 DSKDKCD 7
D K KCD
Sbjct: 2521 DGKSKCD 2527
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 DSKDKCD 7
D K KCD
Sbjct: 2521 DGKSKCD 2527
>sp|V_MUMP1|NON-STRUCTURAL protein V|Mumps virus (strain SBL-1) (MuV)
Query: 4 DKCDRD 9
D+C+RD
Sbjct: 215 DQCERD 220
>sp|FUS_HMPVC|FUSION glycoprotein F0|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 SKDKCDRD 9
+K+KCD D
Sbjct: 178 NKNKCDID 185
>sp|V_MUMPZ|NON-STRUCTURAL protein V|Mumps virus genotype N (strain
Query: 4 DKCDRD 9
D+C+RD
Sbjct: 215 DQCERD 220
>sp|V_MUMPE|NON-STRUCTURAL protein V|Mumps virus (strain Enders) (MuV)
Query: 4 DKCDRD 9
D+C+RD
Sbjct: 215 DQCERD 220
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 KCDRD 9
KCD+D
Sbjct: 368 KCDKD 372
>sp|V_MUMPJ|NON-STRUCTURAL protein V|Mumps virus genotype A (strain
Query: 4 DKCDRD 9
D+C+RD
Sbjct: 215 DQCERD 220
>sp|V_MUMPS|NON-STRUCTURAL protein V|Mumps virus (strain SBL) (MuV)
Query: 4 DKCDRD 9
D+C+RD
Sbjct: 215 DQCERD 220
>sp|V_MUMPM|NON-STRUCTURAL protein V|Mumps virus genotype B (strain
Query: 4 DKCDRD 9
D+C+RD
Sbjct: 215 DQCERD 220
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 5 KCDRDG 10
KC RDG
Sbjct: 1618 KCVRDG 1623
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 5 KCDRDG 10
KC RDG
Sbjct: 1630 KCVRDG 1635
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 5 KCDRDG 10
KC RDG
Sbjct: 1628 KCVRDG 1633
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 5 KCDRDG 10
KC RDG
Sbjct: 1626 KCVRDG 1631
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 5 KCDRDG 10
KC RDG
Sbjct: 1627 KCVRDG 1632
58|SequenceR|295|286|PCDAEDSKDK
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 PCDAEDSK 8
PC AE+SK
Sbjct: 2430 PCAAEESK 2437
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PCDAEDSK 8
PC AE+SK
Sbjct: 2432 PCAAEESK 2439
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PCDAEDSK 8
PC AE+SK
Sbjct: 2432 PCAAEESK 2439
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PCDAEDSK 8
PC AE+SK
Sbjct: 2432 PCAAEESK 2439
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PCDAEDSK 8
PC AE+SK
Sbjct: 2432 PCAAEESK 2439
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PCDAEDSK 8
PC AE+SK
Sbjct: 2432 PCAAEESK 2439
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PCDAEDSK 8
PC AE+SK
Sbjct: 2432 PCAAEESK 2439
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 PCDAEDSK 8
PC AE++K
Sbjct: 2433 PCAAEETK 2440
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PCDAEDSK 8
PC AE++K
Sbjct: 2432 PCAAEETK 2439
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 PCDAEDSK 8
PC AE+ K
Sbjct: 2445 PCSAEEEK 2452
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 PCDAEDSK 8
PC AE+ K
Sbjct: 2443 PCSAEEEK 2450
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 PCDAEDSK 8
PC AE+ K
Sbjct: 2443 PCSAEEEK 2450
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 PCDAEDSK 8
PC AE+ K
Sbjct: 2436 PCSAEEEK 2443
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 PCDAEDSK 8
PC AE+ K
Sbjct: 2436 PCSAEEEK 2443
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PCDAEDSK 8
PC AE+ K
Sbjct: 2433 PCAAEEQK 2440
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 PCDAEDSK 8
PC AE+ K
Sbjct: 2433 PCAAEEQK 2440
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 PCDAEDSK 8
PC AE+ K
Sbjct: 2444 PCAAEEEK 2451
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 PCDAEDSK 8
PC AE+ K
Sbjct: 2433 PCAAEEQK 2440
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 PCDAEDSK 8
PC AE+ K
Sbjct: 2441 PCAAEEEK 2448
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 PCDAEDSK 8
PC AE+ K
Sbjct: 2438 PCAAEEEK 2445
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 PCDAEDSK 8
PC AE+ K
Sbjct: 2441 PCAAEEEK 2448
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 PCDAEDSK 8
PC AE+ K
Sbjct: 2437 PCAAEEEK 2444
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 PCDAEDSK 8
PC AE+ K
Sbjct: 2435 PCAAEEEK 2442
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 PCDAEDSK 8
PC AE+ K
Sbjct: 2440 PCAAEEEK 2447
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 PCDAEDSK 8
PC AE+ K
Sbjct: 2441 PCAAEEEK 2448
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 1 PCDAEDS 7
PC EDS
Sbjct: 125 PCHVEDS 131
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 DAEDSKDK 10
DAE +KD+
Sbjct: 2043 DAETTKDE 2050
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 DAEDSKDK 10
DAE +KD+
Sbjct: 2043 DAETTKDE 2050
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 DAEDSKDK 10
DAE +KD+
Sbjct: 2043 DAETTKDE 2050
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 DAEDSKDK 10
DAE +KD+
Sbjct: 2043 DAETTKDE 2050
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 2 CDAEDSKD 9
CD +D K+
Sbjct: 460 CDIKDEKN 467
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 2 CDAEDSKD 9
CD +D K+
Sbjct: 470 CDIKDEKN 477
59|SequenceR|300|291|RCTGLPCDAE
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 1 RCTGLPCDA 9
+C G P DA
Sbjct: 462 KCAGAPSDA 470
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RCTGLPCDA 9
+C G P DA
Sbjct: 462 KCAGAPSDA 470
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CTGLPCDAE 10
C G PC+ E
Sbjct: 211 CGGNPCERE 219
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 2 CTGLPCDAE 10
C G PC+ E
Sbjct: 1098 CGGNPCERE 1106
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 RCTGLPCDA 9
R TG PC A
Sbjct: 2339 RLTGSPCAA 2347
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 RCTGLPCDA 9
R TG PC A
Sbjct: 2331 RLTGSPCAA 2339
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 RCTGLPCDA 9
R TG PC A
Sbjct: 2339 RLTGSPCAA 2347
>sp|PG191_MONPV|PROTEIN OPG191|Monkeypox virus (MPXV)
Query: 1 RCTGLPCD 8
RCT +P D
Sbjct: 45 RCTVIPFD 52
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RCTGLPCDAE 10
+ +GL CDA+
Sbjct: 102 KLSGLYCDAD 111
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 1 RCTGLPCDAE 10
+ +GL CDA+
Sbjct: 102 KLSGLYCDAD 111
>sp|GM_VZVO|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Oka vaccine)
Query: 3 TGLPC 7
TG+PC
Sbjct: 64 TGIPC 68
>sp|GM_VZVD|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 TGLPC 7
TG+PC
Sbjct: 64 TGIPC 68
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 4 GLPCDA 9
G+PC+A
Sbjct: 198 GVPCNA 203
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 1 RCTGLPCDA 9
RC L C A
Sbjct: 14 RCISLTCGA 22
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 5 LPCDAE 10
LPCD +
Sbjct: 263 LPCDCD 268
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 5 LPCDAE 10
LPCD +
Sbjct: 225 LPCDCD 230
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 5 LPCDAE 10
LPCD +
Sbjct: 260 LPCDCD 265
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 5 LPCDAE 10
LPCD +
Sbjct: 288 LPCDCD 293
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 5 LPCDAE 10
LPCD +
Sbjct: 288 LPCDCD 293
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 6 PCDAE 10
PCDA+
Sbjct: 176 PCDAD 180
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 RCTGLPCDA 9
R TGL C++
Sbjct: 2778 RITGLYCNS 2786
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 6 PCDAE 10
PCDAE
Sbjct: 100 PCDAE 104
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 RCTGLPCD 8
RC G P D
Sbjct: 124 RCQGPPVD 131
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RCTGLPCD 8
RC G P D
Sbjct: 124 RCQGPPVD 131
>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins
Query: 2 CTGLPCDAE 10
CTG+ +AE
Sbjct: 80 CTGVVTEAE 88
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 2 CTGLPCDAE 10
CTG+ +AE
Sbjct: 80 CTGVVTEAE 88
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 2 CTGLPCDAE 10
CTG+ +AE
Sbjct: 80 CTGVVTEAE 88
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 2 CTGLPCDAE 10
CTG+ +AE
Sbjct: 80 CTGVVTEAE 88
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 2 CTGLPCDAE 10
CTG+ +AE
Sbjct: 80 CTGVVTEAE 88
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 2 CTGLP 6
C+GLP
Sbjct: 61 CSGLP 65
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 2 CTGLPCDAE 10
CTG+ +AE
Sbjct: 80 CTGVVTEAE 88
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 2 CTGLPCDAE 10
CTG+ +AE
Sbjct: 80 CTGVVTEAE 88
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 2 CTGLPCDAE 10
CTG+ +AE
Sbjct: 80 CTGVVTEAE 88
>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)
Query: 2 CTGLPCDAE 10
CTG+ +AE
Sbjct: 80 CTGVVTEAE 88
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 2 CTGLPCDAE 10
CTG+ +AE
Sbjct: 80 CTGVVTEAE 88
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 2 CTGLPCDAE 10
CTG+ +AE
Sbjct: 80 CTGVVTEAE 88
>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)
Query: 2 CTGLPCDAE 10
CTG+ +AE
Sbjct: 80 CTGVVTEAE 88
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 2 CTGLPCDAE 10
CTG+ +AE
Sbjct: 80 CTGVVTEAE 88
60|SequenceR|305|296|QFEDGRCTGL
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 1 QFEDGRCT 8
QF++GRCT
Sbjct: 264 QFQNGRCT 271
>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 QFEDGRCTGL 10
QF+DG+ GL
Sbjct: 318 QFQDGKALGL 327
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 1 QFEDGRC 7
QF++GRC
Sbjct: 265 QFQNGRC 271
>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 FEDGRCTGL 10
FED +C GL
Sbjct: 140 FEDMKCIGL 148
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 3 EDGRCTGL 10
EDG CT L
Sbjct: 153 EDGSCTSL 160
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 4 DGRCTG 9
+GRCTG
Sbjct: 8 EGRCTG 13
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 FEDGRCTG 9
F DG C+G
Sbjct: 1301 FADGGCSG 1308
>sp|US02_HCMVT|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain Towne)
Query: 1 QFEDGRC 7
Q ED RC
Sbjct: 46 QIEDNRC 52
>sp|US02_HCMVA|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 QFEDGRC 7
Q ED RC
Sbjct: 46 QIEDNRC 52
>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 FEDGRCTGL 10
FE+ +C GL
Sbjct: 140 FEEMKCIGL 148
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 FEDGRCTGL 10
FE+ +C GL
Sbjct: 140 FEEMKCIGL 148
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 1 QFEDGRCT 8
Q ++GRCT
Sbjct: 260 QPQNGRCT 267
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 FEDGRC 7
FE+G+C
Sbjct: 828 FEEGKC 833
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 FEDGRC 7
FE+G+C
Sbjct: 828 FEEGKC 833
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 FEDGRC 7
FE+G+C
Sbjct: 828 FEEGKC 833
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 FEDGRC 7
FE+G+C
Sbjct: 828 FEEGKC 833
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 FEDGRC 7
FE+G+C
Sbjct: 828 FEEGKC 833
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 FEDGRC 7
FE+G+C
Sbjct: 828 FEEGKC 833
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 4 DGRCTG 9
+GRC+G
Sbjct: 8 EGRCSG 13
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 2 FEDGRC 7
FE+G+C
Sbjct: 828 FEEGKC 833
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 QFEDGRCT 8
Q+E+GR T
Sbjct: 192 QYENGRFT 199
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 QFEDGRCT 8
Q+E+GR T
Sbjct: 208 QYENGRFT 215
Query: 4 DGRCT 8
DG+CT
Sbjct: 597 DGKCT 601
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 QFEDGRCT 8
Q+E+GR T
Sbjct: 208 QYENGRFT 215
Query: 4 DGRCT 8
DG+CT
Sbjct: 597 DGKCT 601
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 QFEDGRCT 8
Q+E+GR T
Sbjct: 207 QYENGRFT 214
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 QFEDGRCT 8
Q+E+GR T
Sbjct: 207 QYENGRFT 214
Query: 4 DGRCT 8
DG+CT
Sbjct: 596 DGKCT 600
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 QFEDGRCT 8
Q+E+GR T
Sbjct: 208 QYENGRFT 215
Query: 4 DGRCT 8
DG+CT
Sbjct: 597 DGKCT 601
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 QFEDGRCT 8
Q+E+GR T
Sbjct: 208 QYENGRFT 215
Query: 4 DGRCT 8
DG+CT
Sbjct: 597 DGKCT 601
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 4 DGRCTG 9
+GRC+G
Sbjct: 223 EGRCSG 228
>sp|US02_HCMVM|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 1 QFEDGRC 7
+ ED RC
Sbjct: 46 EIEDNRC 52
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 1 QFEDGRCTGL 10
+F D C G+
Sbjct: 62 EFADALCIGI 71
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 QFEDGRCTGL 10
+F D C G+
Sbjct: 62 EFADALCIGI 71
>sp|VE2_HPV31|REGULATORY protein E2|Human papillomavirus 31
Query: 4 DGRCT 8
DG+CT
Sbjct: 142 DGQCT 146
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 FEDGRC 7
FE+G C
Sbjct: 826 FEEGSC 831
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 FEDGRC 7
FE+G C
Sbjct: 826 FEEGSC 831
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 FEDGRC 7
FE+G C
Sbjct: 826 FEEGSC 831
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 EDGRCTGL 10
E+G+ TGL
Sbjct: 1528 ENGKFTGL 1535
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 FEDGRC 7
FE+G C
Sbjct: 826 FEEGSC 831
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 4 DGRCTGL 10
DG C G+
Sbjct: 410 DGMCVGV 416
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 FEDGRC 7
FE+G C
Sbjct: 826 FEEGTC 831
61|SequenceR|310|301|TGDGCQFEDG
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 TGDGCQ 6
TG+GCQ
Sbjct: 53 TGEGCQ 58
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 TGDGCQ 6
TG+GCQ
Sbjct: 53 TGEGCQ 58
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 TGDGCQ 6
T DGCQ
Sbjct: 53 TADGCQ 58
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 GDGCQFED 9
GD C+ ED
Sbjct: 653 GDRCRLED 660
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 GDGCQFED 9
GD C+ ED
Sbjct: 653 GDRCRLED 660
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 TGDGCQ 6
T DGCQ
Sbjct: 53 TADGCQ 58
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 2 GDGCQFED 9
GD C+ ED
Sbjct: 653 GDRCRLED 660
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 GDGCQFED 9
GD C ED
Sbjct: 653 GDRCNLED 660
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 GDGCQFED 9
GD C ED
Sbjct: 653 GDRCNLED 660
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 GDGCQFED 9
GD C ED
Sbjct: 653 GDRCNLED 660
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 2 GDGCQFED 9
GD C ED
Sbjct: 653 GDPCNLED 660
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 GDGCQFED 9
GD C ED
Sbjct: 653 GDRCDLED 660
>sp|M2_I85A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Netherlands/12/1985
Query: 2 GDGCQFED 9
G GC+F D
Sbjct: 14 GWGCRFSD 21
>sp|UL136_HCMVT|PROTEIN UL136|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 GDGCQFE 8
G GC+F+
Sbjct: 150 GSGCRFD 156
>sp|UL136_HCMVM|PROTEIN UL136|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GDGCQFE 8
G GC+F+
Sbjct: 150 GSGCRFD 156
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 GDGCQFED 9
GD C+ +D
Sbjct: 650 GDRCELDD 657
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 GDGCQFED 9
GD C ED
Sbjct: 448 GDPCWLED 455
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GDGCQFED 9
GD C ED
Sbjct: 463 GDPCWLED 470
>sp|VE5B_HPV6B|PROBABLE protein E5B|Human papillomavirus type 6b
Query: 5 CQFEDG 10
CQF DG
Sbjct: 5 CQFNDG 10
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 5 CQFED 9
CQF+D
Sbjct: 1088 CQFKD 1092
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 CQFED 9
CQF+D
Sbjct: 1088 CQFKD 1092
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 TGDGC 5
TG+GC
Sbjct: 308 TGNGC 312
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 TGDGC 5
TG+GC
Sbjct: 308 TGNGC 312
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 TGDGC 5
TG+GC
Sbjct: 308 TGNGC 312
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GDGC 5
GDGC
Sbjct: 1434 GDGC 1437
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GDGC 5
GDGC
Sbjct: 1434 GDGC 1437
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 GDGC 5
GDGC
Sbjct: 312 GDGC 315
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 GDGCQFEDG 10
GDGC+ G
Sbjct: 93 GDGCRSPGG 101
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 TGDGCQ 6
T DGC+
Sbjct: 53 TSDGCK 58
>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 TGDGCQ 6
T DGC+
Sbjct: 53 TSDGCK 58
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 TGDGCQF 7
T DGC +
Sbjct: 1111 TADGCWY 1117
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 TGDGCQF 7
TG GC +
Sbjct: 260 TGTGCAY 266
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 TGDGCQF 7
TG GC +
Sbjct: 260 TGTGCAY 266
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 GDGCQFEDG 10
GDGC+ G
Sbjct: 93 GDGCRSPGG 101
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 GDGCQFEDG 10
GDGC+ G
Sbjct: 93 GDGCRSPGG 101
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 2 GDGC 5
GDGC
Sbjct: 474 GDGC 477
62|SequenceR|315|306|IALVCTGDGC
>sp|VGPCR_HHV8P|VIRAL G-protein coupled receptor|Human herpesvirus 8 type P
Query: 1 IALVCTGDGC 10
IALV +GD C
Sbjct: 171 IALVLSGDAC 180
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 2 ALVCTGDG 9
+L CTGD
Sbjct: 205 SLTCTGDA 212
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 ALVCTGDG 9
+L CTGD
Sbjct: 205 SLTCTGDA 212
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 4 VCTGDG 9
VC GDG
Sbjct: 498 VCGGDG 503
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 5 CTGDGC 10
C+GD C
Sbjct: 218 CSGDTC 223
>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)
Query: 4 VCTGDGC 10
+C GD C
Sbjct: 419 ICLGDLC 425
>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 VCTGDGC 10
+C GD C
Sbjct: 419 ICLGDLC 425
>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain Copenhagen)
Query: 5 CTGDGC 10
CT GC
Sbjct: 169 CTSTGC 174
>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)
Query: 5 CTGDGC 10
CT GC
Sbjct: 169 CTSTGC 174
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 LVCTGDG 9
++C GDG
Sbjct: 1655 VLCGGDG 1661
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 CTGDGC 10
CT GC
Sbjct: 403 CTKSGC 408
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 4 VCTGD 8
VCTGD
Sbjct: 109 VCTGD 113
>sp|TRX2_HHV11|TRIPLEX capsid protein 2|Human herpesvirus 1 (strain 17)
Query: 1 IALVCTGDG 9
+ VCT DG
Sbjct: 294 VVRVCTFDG 302
>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate
Query: 1 IALVCTG 7
IALV TG
Sbjct: 228 IALVATG 234
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 1 IALVCTG 7
IALV TG
Sbjct: 228 IALVATG 234
>sp|TRX2_HHV2H|TRIPLEX capsid protein 2|Human herpesvirus 2 (strain HG52)
Query: 4 VCTGDG 9
VCT DG
Sbjct: 297 VCTFDG 302
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 4 VCTGDGC 10
+CT GC
Sbjct: 589 LCTAPGC 595
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 4 VCTGDGC 10
+CT GC
Sbjct: 589 LCTAPGC 595
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 2 ALVCTGD 8
ALV TGD
Sbjct: 208 ALVFTGD 214
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 2 ALVCTGD 8
ALV TGD
Sbjct: 208 ALVFTGD 214
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 2 ALVCTGD 8
ALV TGD
Sbjct: 208 ALVFTGD 214
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 4 VCTGDGC 10
+CT GC
Sbjct: 589 LCTAPGC 595
>sp|J1I_HCMVA|UNCHARACTERIZED protein HKRFX|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 IALVCTGDGC 10
++ VC GC
Sbjct: 173 VSAVCAASGC 182
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 VCTGD 8
VCTGD
Sbjct: 1022 VCTGD 1026
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 4 VCTGDGC 10
+CT GC
Sbjct: 589 LCTAPGC 595
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 4 VCTGDGC 10
+CT GC
Sbjct: 589 LCTAPGC 595
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 4 VCTGDGC 10
+CT GC
Sbjct: 589 LCTAPGC 595
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 4 VCTGDGC 10
+CT GC
Sbjct: 589 LCTAPGC 595
63|SequenceR|320|311|QNCHKIALVC
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QNCHKIA 7
QN H+IA
Sbjct: 1224 QNAHQIA 1230
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QNCHKIA 7
QN H+IA
Sbjct: 1224 QNAHQIA 1230
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 QNCHKIA 7
QN H+IA
Sbjct: 1224 QNAHQIA 1230
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 QNCHKIALV 9
+ CHKI V
Sbjct: 55 EGCHKILTV 63
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 QNCHKIALV 9
+ CHKI V
Sbjct: 55 EGCHKILTV 63
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 NCHK 5
NCHK
Sbjct: 1364 NCHK 1367
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 NCHK 5
NCHK
Sbjct: 1364 NCHK 1367
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 QNCHKIAL 8
QN +K+AL
Sbjct: 1366 QNAYKLAL 1373
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 2 NCHKIALVC 10
NC + L+C
Sbjct: 103 NCRRWRLLC 111
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 4 HKIALVC 10
H++ LVC
Sbjct: 1988 HEVYLVC 1994
>sp|ORF23_HHV8P|PROTEIN ORF23|Human herpesvirus 8 type P
Query: 4 HKIALVC 10
H IA VC
Sbjct: 192 HNIAQVC 198
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 4 HKIALVC 10
HKI L C
Sbjct: 159 HKIPLSC 165
>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)
Query: 3 CHKIALVC 10
C K +L+C
Sbjct: 455 CLKFSLIC 462
64|SequenceR|325|316|PCDQEQNCHK
>sp|U13_HHV6U|UNCHARACTERIZED protein U13|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CDQEQNC 8
CD E NC
Sbjct: 94 CDSEHNC 100
>sp|U13_HHV6Z|UNCHARACTERIZED protein U13|Human herpesvirus 6B (strain Z29)
Query: 2 CDQEQNC 8
CD E NC
Sbjct: 95 CDSENNC 101
>sp|PG005_VACCC|PROTEIN OPG005|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PCDQEQNCH 9
PC Q + CH
Sbjct: 35 PCAQFRPCH 43
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 DQEQNCH 9
D+E+ CH
Sbjct: 2967 DEERECH 2973
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 1 PCDQEQNCH 9
PCD+ C+
Sbjct: 282 PCDRPPTCY 290
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CDQEQNC 8
CD +NC
Sbjct: 142 CDDPRNC 148
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 CDQEQNC 8
CD +NC
Sbjct: 142 CDDPRNC 148
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 1 PCDQEQNCH 9
PCD+ C+
Sbjct: 282 PCDRPPTCY 290
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 2 CDQEQNC 8
CD +NC
Sbjct: 142 CDDPRNC 148
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PCDQEQ 6
PC +EQ
Sbjct: 100 PCSEEQ 105
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PCDQEQ 6
PC +EQ
Sbjct: 100 PCSEEQ 105
>sp|PG005_MONPV|PROTEIN OPG005|Monkeypox virus (MPXV)
Query: 1 PCDQEQNCH 9
PC Q CH
Sbjct: 4 PCAQFSPCH 12
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PCDQEQNC 8
PC Q NC
Sbjct: 136 PCIQLNNC 143
>sp|AN_HHV7J|ALKALINE nuclease|Human herpesvirus 7 (strain JI)
Query: 3 DQEQNC 8
D E+NC
Sbjct: 402 DDEKNC 407
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PCDQEQNC 8
PC + NC
Sbjct: 145 PCARADNC 152
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 PCDQEQNCHK 10
P D Q+C +
Sbjct: 2396 PVDDTQDCDR 2405
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 1 PCDQEQNCH 9
PC++ + C+
Sbjct: 206 PCEEGKKCY 214
>sp|UNG_HHV6U|URACIL-DNA glycosylase|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 DQEQNC 8
D+E+NC
Sbjct: 13 DEEKNC 18
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 PCDQEQNCH 9
PCD+ C+
Sbjct: 274 PCDKPPVCY 282
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 PCDQEQNCHK 10
PC E+N H+
Sbjct: 284 PCCYEKNPHE 293
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PCDQEQNC 8
PC + NC
Sbjct: 142 PCIRTNNC 149
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 PCDQEQNCHK 10
PC E+N H+
Sbjct: 284 PCCYEKNPHE 293
65|SequenceR|330|321|EDSGDPCDQE
>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain
Query: 3 SGDPCDQE 10
SGDP DQ+
Sbjct: 47 SGDPSDQQ 54
>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain
Query: 3 SGDPCDQE 10
SGDP DQ+
Sbjct: 47 SGDPSDQQ 54
>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain
Query: 3 SGDPCDQE 10
SGDP DQ+
Sbjct: 47 SGDPSDQQ 54
>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)
Query: 3 SGDPCDQE 10
SGDP DQ+
Sbjct: 47 SGDPSDQQ 54
>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)
Query: 3 SGDPCDQE 10
SGDP DQ+
Sbjct: 47 SGDPSDQQ 54
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 4 GDPCDQ 9
GDPC Q
Sbjct: 563 GDPCKQ 568
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 4 GDPCDQE 10
GDPC+ E
Sbjct: 653 GDPCNLE 659
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 4 GDPCDQE 10
GDP DQE
Sbjct: 215 GDPRDQE 221
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 SGDPC 7
SGDPC
Sbjct: 474 SGDPC 478
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 SGDPC 7
SGDPC
Sbjct: 474 SGDPC 478
>sp|VE8E2_HPV16|PROTEIN E8^E2C|Human papillomavirus type 16
Query: 2 DSGDPC 7
D+G+PC
Sbjct: 58 DTGNPC 63
>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16
Query: 2 DSGDPC 7
D+G+PC
Sbjct: 246 DTGNPC 251
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 GDPCDQE 10
G+PC++E
Sbjct: 213 GNPCERE 219
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 2 DSGDPCDQE 10
D G PC E
Sbjct: 592 DRGAPCSSE 600
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 DSGDPCDQE 10
D G PC E
Sbjct: 592 DRGAPCSSE 600
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 4 GDPCDQE 10
GDP DQ+
Sbjct: 215 GDPRDQD 221
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 EDSGDPCD 8
E+S D CD
Sbjct: 895 EESTDECD 902
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 EDSGDPCD 8
E+S D CD
Sbjct: 967 EESTDECD 974
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 EDSGDPCD 8
E+S D CD
Sbjct: 967 EESTDECD 974
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 EDSGDPCD 8
E+S D CD
Sbjct: 967 EESTDECD 974
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 4 GDPCDQE 10
G+PC++E
Sbjct: 1100 GNPCERE 1106
>sp|REV_HV1YB|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 1 EDSGDP 6
EDSGDP
Sbjct: 88 EDSGDP 93
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 4 GDPC 7
GDPC
Sbjct: 446 GDPC 449
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 4 GDPCDQ 9
G PCD+
Sbjct: 154 GQPCDE 159
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 2 DSGDPCDQE 10
D+G P D+E
Sbjct: 710 DAGGPGDEE 718
Query: 2 DSGDPCDQ 9
D+G PC +
Sbjct: 1047 DAGTPCSR 1054
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 EDSGDPCD 8
E+S D CD
Sbjct: 967 EESTDECD 974
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 EDSGDPC 7
ED+ PC
Sbjct: 1971 EDTATPC 1977
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 1 EDSGDPCDQE 10
ED D CD E
Sbjct: 373 EDVLDVCDDE 382
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 EDSGDPCD 8
E+S D CD
Sbjct: 967 EESTDECD 974
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 EDSGDPCD 8
E+S D CD
Sbjct: 967 EESTDECD 974
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 4 GDPCDQ 9
G PCD+
Sbjct: 154 GQPCDE 159
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 4 GDPCDQ 9
G PCD+
Sbjct: 154 GQPCDE 159
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 4 GDPCDQE 10
GDP DQ+
Sbjct: 215 GDPRDQK 221
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 EDSGDPC 7
ED+ PC
Sbjct: 1970 EDTATPC 1976
>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain
Query: 4 GDPCDQ 9
G PCD+
Sbjct: 154 GQPCDE 159
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 EDSGDPC 7
ED+ PC
Sbjct: 1971 EDTSTPC 1977
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 DSGDPCD 8
D G PC+
Sbjct: 165 DVGHPCE 171
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 3 SGDPCDQ 9
SG PCD+
Sbjct: 32 SGAPCDE 38
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 GDPCDQE 10
GD CD E
Sbjct: 653 GDRCDLE 659
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 2 DSGDPC 7
D+G PC
Sbjct: 1040 DAGTPC 1045
>sp|TAT_HV1MV|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 3 SGDPCDQE 10
SG PC Q+
Sbjct: 94 SGQPCHQD 101
66|SequenceR|335|326|QLCGAEDSGD
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 2 LCGAEDSG 9
LCG D+G
Sbjct: 441 LCGPSDTG 448
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 2 LCGAEDSGD 10
LC SGD
Sbjct: 344 LCATATSGD 352
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 3 CGAEDSGD 10
C A+ +GD
Sbjct: 174 CSAQSNGD 181
>sp|AGNO_POVBA|AGNOPROTEIN polyomavirus (strain AS) (BKPyV)
Query: 1 QLCGAEDSGD 10
+ C EDS D
Sbjct: 46 EFCRGEDSVD 55
>sp|AGNO_POVBK|AGNOPROTEIN polyomavirus (BKPyV) (Human polyomavirus
Query: 1 QLCGAEDSGD 10
+ C EDS D
Sbjct: 38 EFCRGEDSVD 47
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 2 LCGAEDSG 9
+CG D+G
Sbjct: 434 ICGPPDTG 441
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 2 LCGAEDS 8
LCG +DS
Sbjct: 19 LCGRQDS 25
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 CGAEDSGD 10
CGA SG+
Sbjct: 2035 CGANISGN 2042
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 CGAEDSGD 10
CGA SG+
Sbjct: 2035 CGANISGN 2042
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 2 LCGAEDSG 9
LC +DSG
Sbjct: 125 LCEEQDSG 132
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 5 AEDSGD 10
+EDSGD
Sbjct: 181 SEDSGD 186
67|SequenceR|340|331|CENLGQLCGA
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 4 LGQLCG 9
LGQLCG
Sbjct: 424 LGQLCG 429
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 4 LGQLCG 9
LGQLCG
Sbjct: 424 LGQLCG 429
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 4 LGQLCG 9
LGQLCG
Sbjct: 424 LGQLCG 429
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CENLGQLC 8
CE+L +LC
Sbjct: 246 CEDLSELC 253
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CENLGQLC 8
CE+L +LC
Sbjct: 246 CEDLSELC 253
>sp|NSP2_ROTHC|NON-STRUCTURAL protein 2|Rotavirus C (isolate RVC/Human/United
Query: 4 LGQLCGA 10
+GQLCG
Sbjct: 270 IGQLCGG 276
>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)
Query: 5 GQLCG 9
GQLCG
Sbjct: 223 GQLCG 227
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 CENLGQLCGA 10
CE + CGA
Sbjct: 920 CETVCSYCGA 929
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 5 GQLCG 9
GQLCG
Sbjct: 2696 GQLCG 2700
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 5 GQLCG 9
GQLCG
Sbjct: 2695 GQLCG 2699
>sp|NS1_INCAA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Ann
Query: 1 CENLGQLCG 9
C N ++CG
Sbjct: 166 CRNTKKICG 174
>sp|NS1_INCCA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/California/1978)
Query: 1 CENLGQLCG 9
C N ++CG
Sbjct: 166 CRNTKKICG 174
>sp|NS1_INCY6|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/1964)
Query: 1 CENLGQLCG 9
C N ++CG
Sbjct: 166 CRNTKKICG 174
>sp|ORF24_TTVV4|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 CENLGQLCG 9
C++ G CG
Sbjct: 22 CQSHGAFCG 30
>sp|NS1_INCHY|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 CENLGQLCG 9
C N ++CG
Sbjct: 166 CRNTKKICG 174
>sp|NS1_INCTA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 CENLGQLCG 9
C N ++CG
Sbjct: 161 CRNTKKICG 169
>sp|NS1_INCJH|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 CENLGQLCG 9
C N ++CG
Sbjct: 161 CRNTKKICG 169
>sp|NS1_INCGL|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Great
Query: 1 CENLGQLCG 9
C N ++CG
Sbjct: 161 CRNTKKICG 169
>sp|NS1_INCYA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/10/1981)
Query: 1 CENLGQLCG 9
C N ++CG
Sbjct: 161 CRNTKKICG 169
>sp|NS1_INCMI|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Mississippi/1980)
Query: 1 CENLGQLCG 9
C N ++CG
Sbjct: 161 CRNTKKICG 169
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 4 LGQLC 8
LGQLC
Sbjct: 424 LGQLC 428
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 4 LGQLC 8
LGQLC
Sbjct: 424 LGQLC 428
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 CENLGQLCGA 10
CE + CGA
Sbjct: 1047 CETVCAQCGA 1056
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 CENLGQLCGA 10
CE + CGA
Sbjct: 1056 CETVCGACGA 1065
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 CENLGQLCGA 10
CE + CGA
Sbjct: 1056 CETVCGACGA 1065
>sp|ORF23_TTVV4|PROBABLE protein VP2|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 CENLGQLCG 9
C++ G CG
Sbjct: 22 CQSHGAFCG 30
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 1 CENLGQLCGA 10
CE + CGA
Sbjct: 1051 CETVCAHCGA 1060
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 NLGQLC 8
N+G LC
Sbjct: 779 NMGSLC 784
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 4 LGQLCG 9
GQ+CG
Sbjct: 1158 FGQMCG 1163
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 2 ENLGQLC 8
ENL Q C
Sbjct: 388 ENLSQTC 394
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 CENLGQLCGA 10
CE + CGA
Sbjct: 980 CETVCVSCGA 989
68|SequenceR|345|336|GNNHLCENLG
>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)
Query: 2 NNHLCENLG 10
NNH C+++G
Sbjct: 342 NNHQCDDIG 350
>sp|GLYC_HRSV8|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 1 GNNHLCENL 9
GNN LC+++
Sbjct: 177 GNNQLCKSI 185
>sp|GLYC_HRSV1|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 1 GNNHLCENL 9
GNN LC+++
Sbjct: 177 GNNQLCKSI 185
>sp|MCES_VARV|MRNA-CAPPING enzyme regulatory subunit|Variola virus
Query: 2 NNHLCEN 8
NNHL EN
Sbjct: 120 NNHLTEN 126
>sp|MCES_VAR67|MRNA-CAPPING enzyme regulatory subunit OPG124|Variola virus (isolate
Query: 2 NNHLCEN 8
NNHL EN
Sbjct: 120 NNHLTEN 126
>sp|MCES_VACCC|MRNA-CAPPING enzyme regulatory subunit OPG124|Vaccinia virus (strain Copenhagen)
Query: 2 NNHLCEN 8
NNHL EN
Sbjct: 120 NNHLTEN 126
>sp|MCES_VACCA|MRNA-CAPPING enzyme regulatory subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 NNHLCEN 8
NNHL EN
Sbjct: 120 NNHLTEN 126
>sp|MCES_MONPV|MRNA-CAPPING enzyme regulatory subunit OPG124|Monkeypox virus (MPXV)
Query: 2 NNHLCEN 8
NNHL EN
Sbjct: 120 NNHLTEN 126
>sp|GLYC_HRSVB|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 1 GNNHLCENL 9
GNN LC+++
Sbjct: 177 GNNQLCKSI 185
>sp|UL33_HHV7J|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 7 (strain JI)
Query: 2 NNHLCENLG 10
NNH+ N+G
Sbjct: 156 NNHIKRNVG 164
>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 LCENLG 10
LCEN+G
Sbjct: 248 LCENIG 253
>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 LCENLG 10
LCEN+G
Sbjct: 248 LCENIG 253
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 3 NHLCENL 9
N+LC+N
Sbjct: 261 NYLCDNF 267
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 3 NHLCENL 9
N+LC+N
Sbjct: 261 NYLCDNF 267
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 LCENLG 10
LCE+LG
Sbjct: 359 LCESLG 364
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HLCENL 9
HLCE L
Sbjct: 507 HLCEAL 512
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 2 NNHLCENL 9
NN LC +L
Sbjct: 1019 NNRLCASL 1026
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 4 HLCENLG 10
++CEN G
Sbjct: 1085 YICENCG 1091
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 HLCENLG 10
++CEN G
Sbjct: 1085 YICENCG 1091
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 4 HLCENLG 10
++CEN G
Sbjct: 1085 YICENCG 1091
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 4 HLCENLG 10
++CEN G
Sbjct: 1085 YICENCG 1091
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 4 HLCENLG 10
++CEN G
Sbjct: 1085 YICENCG 1091
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 GNNHLC 6
GNN++C
Sbjct: 5636 GNNNVC 5641
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 2 NNHLCE 7
NN+LC+
Sbjct: 414 NNYLCK 419
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 NNHLCE 7
NN+LC+
Sbjct: 414 NNYLCK 419
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 2 NNHLCE 7
NN+LC+
Sbjct: 414 NNYLCK 419
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 NNHLCEN 8
N H C+N
Sbjct: 667 NRHKCDN 673
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 4 HLCENLG 10
HL E+LG
Sbjct: 1498 HLSEDLG 1504
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 4 HLCENLG 10
++CEN G
Sbjct: 1085 YVCENCG 1091
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 HLCENLG 10
++CEN G
Sbjct: 1085 YVCENCG 1091
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 4 HLCENLG 10
++CEN G
Sbjct: 1077 YVCENCG 1083
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 4 HLCENLG 10
++CEN G
Sbjct: 1085 YVCENCG 1091
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 HLCENL 9
HLCE L
Sbjct: 505 HLCEVL 510
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 2 NNHLCENLG 10
+N LC N G
Sbjct: 210 HNTLCLNFG 218
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 2 NNHLCENLG 10
+N LC N G
Sbjct: 210 HNTLCLNFG 218
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 GNNHLCENLG 10
GN +CE +
Sbjct: 2430 GNTFICEEVA 2439
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 GNNHLCENLG 10
GN +CE +
Sbjct: 2430 GNTFICEEVA 2439
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 1 GNNHLCENL 9
NN LC +L
Sbjct: 1011 ANNRLCVSL 1019
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 4 HLCENLG 10
HL EN G
Sbjct: 333 HLIENYG 339
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 4 HLCENLG 10
HL EN G
Sbjct: 333 HLIENYG 339
>sp|ORF24_TTVV3|ORF2/4 protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 4 HLCENLG 10
HL NLG
Sbjct: 39 HLATNLG 45
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 1 GNNHLCE 7
GN+ +CE
Sbjct: 356 GNHSICE 362
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 GNNHLCE 7
GN+ +CE
Sbjct: 356 GNHSICE 362
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 GNNHLCE 7
GN+ +CE
Sbjct: 356 GNHSICE 362
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 NNHLCENL 9
N+H+ EN+
Sbjct: 594 NDHVYENI 601
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 NNHLCENL 9
N+H+ EN+
Sbjct: 594 NDHVYENI 601
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 GNNHLCEN 8
GNN C N
Sbjct: 2638 GNNVYCYN 2645
69|SequenceR|350|341|IHSCGGNNHL
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 3 SCGGNNHL 10
S GNNHL
Sbjct: 1998 SGAGNNHL 2005
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 IHSCGGNNHL 10
I+ CG NH+
Sbjct: 1124 INFCGNGNHI 1133
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 IHSCGGNNHL 10
I + GG+NH+
Sbjct: 969 IVTAGGDNHV 978
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 2 HSCGGNN 8
H CGG +
Sbjct: 650 HRCGGQS 656
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 2 HSCGGNN 8
H CGG +
Sbjct: 650 HRCGGQS 656
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 2 HSCGGNN 8
H CGG +
Sbjct: 650 HRCGGQS 656
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 SCGGNNHL 10
+ GG+NH+
Sbjct: 966 TAGGDNHV 973
>sp|CEP3_HCMVM|CYTOPLASMIC envelopment protein 3|Human cytomegalovirus (strain Merlin)
Query: 4 CGGNN 8
CGGN+
Sbjct: 71 CGGND 75
>sp|CEP3_HCMVA|CYTOPLASMIC envelopment protein 3|Human cytomegalovirus (strain AD169)
Query: 4 CGGNN 8
CGGN+
Sbjct: 71 CGGND 75
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 2 HSCGGNN 8
H C G+N
Sbjct: 189 HMCAGHN 195
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 2 HSCGGNN 8
H C G+N
Sbjct: 189 HMCAGHN 195
>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)
Query: 6 GNNHL 10
GNNH+
Sbjct: 548 GNNHI 552
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 HSCGGNN 8
H+C G N
Sbjct: 1201 HACRGGN 1207
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 1 IHSCG 5
+H+CG
Sbjct: 321 VHTCG 325
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 HSCG 5
HSCG
Sbjct: 6137 HSCG 6140
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 3 SCGGNN 8
+CGG+N
Sbjct: 527 NCGGSN 532
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 SCGGNN 8
+CGG+N
Sbjct: 527 NCGGSN 532
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 1 IHSCG 5
+H+CG
Sbjct: 311 VHACG 315
>sp|PG138_MONPV|25 kDa core protein OPG138|Monkeypox virus (MPXV)
Query: 5 GGNNHL 10
GGNN+L
Sbjct: 42 GGNNNL 47
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 3 SCGGNN 8
+CGG+N
Sbjct: 527 NCGGSN 532
70|SequenceR|355|346|KLDTCIHSCG
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 LDTCIHSC 9
+D CIH C
Sbjct: 2164 IDKCIHIC 2171
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 LDTCIHSC 9
+D CIH C
Sbjct: 2164 IDKCIHIC 2171
>sp|HEMA_I70A0|HEMAGGLUTININ A virus (strain A/Qu/7/1970
Query: 2 LDTCIHSC 9
+DTCI C
Sbjct: 274 IDTCISEC 281
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 4 TCIHSCG 10
+C+H CG
Sbjct: 701 SCVHPCG 707
>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969
Query: 2 LDTCIHSC 9
+DTCI C
Sbjct: 274 IDTCISEC 281
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 2 LDTCIHSC 9
+DTCI C
Sbjct: 290 IDTCISEC 297
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 2 LDTCIHSC 9
+DTCI C
Sbjct: 290 IDTCISEC 297
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 2 LDTCIHSC 9
+DTCI C
Sbjct: 290 IDTCISEC 297
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 LDTCIHSC 9
+DTCI C
Sbjct: 290 IDTCISEC 297
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 2 LDTCIHSC 9
+DTCI C
Sbjct: 290 IDTCISEC 297
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 LDTCIHS 8
LD C+HS
Sbjct: 1345 LDICMHS 1351
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 2 LDTCIHSC 9
+DTCI C
Sbjct: 290 IDTCISEC 297
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 TCIHSC 9
TC H+C
Sbjct: 478 TCCHTC 483
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 TCIHSC 9
TC H+C
Sbjct: 478 TCCHTC 483
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 2 LDTCIHSC 9
+DTC+ C
Sbjct: 289 IDTCVSEC 296
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 2 LDTCIHSC 9
+DTC+ C
Sbjct: 274 IDTCVSEC 281
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 LDTCIHSC 9
+DTC+ C
Sbjct: 274 IDTCVSEC 281
>sp|DR7_HHV6U|TRANSACTIVATOR protein DR7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LDTCIHSC 9
LD+C++ C
Sbjct: 71 LDSCLYVC 78
>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LDTCIHSC 9
LD+C++ C
Sbjct: 103 LDSCLYVC 110
>sp|VE7_HPV60|PROTEIN E7|Human papillomavirus type 60
Query: 2 LDTCIHSCG 10
+DTC CG
Sbjct: 46 IDTCCKPCG 54
>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate
Query: 2 LDTCIHSCG 10
LD C CG
Sbjct: 411 LDKCEEECG 419
Query: 1 KLDTCIHS 8
+LD C H+
Sbjct: 627 RLDECTHN 634
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 2 LDTCIHSCG 10
LD C CG
Sbjct: 412 LDKCEEECG 420
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 LDTCIHS 8
LD C+H+
Sbjct: 1346 LDICLHT 1352
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 DTCIHSCG 10
+ C H CG
Sbjct: 2030 NCCYHVCG 2037
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 DTCIHSCG 10
+ C H CG
Sbjct: 2029 NCCYHVCG 2036
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 DTCIHSCG 10
+ C H CG
Sbjct: 2029 NCCYHVCG 2036
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 DTCIHSCG 10
+ C H CG
Sbjct: 2029 NCCYHVCG 2036
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 DTCIHSCG 10
+ C H CG
Sbjct: 1863 NCCYHVCG 1870
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 DTCIHSCG 10
+ C H CG
Sbjct: 2029 NCCYHVCG 2036
>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P
Query: 5 CIHSCG 10
CI SCG
Sbjct: 239 CIKSCG 244
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 2 LDTCIHSC 9
LD C ++C
Sbjct: 234 LDICTNTC 241
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 5 CIHSC 9
CIH C
Sbjct: 159 CIHFC 163
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 3 DTCIHSC 9
D C+ SC
Sbjct: 632 DICLTSC 638
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 4 TCIHSCG 10
TCIH+ G
Sbjct: 556 TCIHAPG 562
>sp|GL_HHV6Z|ENVELOPE glycoprotein L|Human herpesvirus 6B (strain Z29)
Query: 1 KLDTCI 6
KLD CI
Sbjct: 31 KLDDCI 36
>sp|GL_HHV6U|ENVELOPE glycoprotein L|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KLDTCI 6
KLD CI
Sbjct: 31 KLDDCI 36
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 4 TCIHSCG 10
+C H CG
Sbjct: 700 SCDHPCG 706
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LDTCIHSC 9
++ C H C
Sbjct: 39 IEVCAHRC 46
>sp|NSP3_ROTGA|NON-STRUCTURAL protein 3|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 2 LDTCIHSCG 10
L+T + +CG
Sbjct: 10 LETVLRNCG 18
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 5 CIHSCG 10
CI +CG
Sbjct: 671 CIDNCG 676
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 DTCIHS 8
+TC HS
Sbjct: 8 ETCAHS 13
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 3 DTCIHS 8
+TC HS
Sbjct: 8 ETCAHS 13
71|SequenceR|360|351|CEFGIKLDTC
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 CEFGIKLD 8
C+FGIK D
Sbjct: 1584 CKFGIKKD 1591
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 FGIKLDTC 10
FG+ LD C
Sbjct: 198 FGVSLDLC 205
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 FGIKLDTC 10
FG+ LD C
Sbjct: 198 FGVSLDLC 205
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 FGIKLDTC 10
FG+ LD C
Sbjct: 198 FGVSLDLC 205
>sp|PG145_VARV|TRANSCRIPT termination protein OPG145|Variola virus
Query: 1 CEFGIKLDTC 10
C FG + TC
Sbjct: 115 CGFGKTITTC 124
>sp|PG145_VAR67|TRANSCRIPT termination protein OPG145|Variola virus (isolate
Query: 1 CEFGIKLDTC 10
C FG + TC
Sbjct: 115 CGFGKTITTC 124
>sp|PG145_VACCC|TRANSCRIPT termination protein OPG145|Vaccinia virus (strain Copenhagen)
Query: 1 CEFGIKLDTC 10
C FG + TC
Sbjct: 115 CGFGKTITTC 124
>sp|PG145_MONPV|TRANSCRIPT termination protein OPG145|Monkeypox virus (MPXV)
Query: 1 CEFGIKLDTC 10
C FG + TC
Sbjct: 115 CGFGKTITTC 124
>sp|A18_VACCT|TRANSCRIPT termination protein A18|Vaccinia virus (strain Tian Tan)
Query: 1 CEFGIKLDTC 10
C FG + TC
Sbjct: 115 CGFGKTITTC 124
>sp|A18_VACCA|TRANSCRIPT termination protein A18|Vaccinia virus (strain Ankara) (VACV)
Query: 1 CEFGIKLDTC 10
C FG + TC
Sbjct: 115 CGFGKTITTC 124
>sp|A18_CWPXG|TRANSCRIPT termination protein A18|Cowpox virus (strain GRI-90 /
Query: 1 CEFGIKLDTC 10
C FG + TC
Sbjct: 115 CGFGKTITTC 124
>sp|A18_CWPXB|TRANSCRIPT termination protein A18|Cowpox virus (strain Brighton Red)
Query: 1 CEFGIKLDTC 10
C FG + TC
Sbjct: 115 CGFGKTITTC 124
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 3 FGIKLDTC 10
FG LD C
Sbjct: 1341 FGFDLDIC 1348
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 3 FGIKLDTC 10
FG LD C
Sbjct: 1342 FGFDLDIC 1349
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 FGIKLDT 9
FGIKL+T
Sbjct: 1395 FGIKLET 1401
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 FGIKLDT 9
FGIKL+T
Sbjct: 1395 FGIKLET 1401
>sp|A18_YMTV5|TRANSCRIPT termination protein A18|Yaba monkey tumor virus (strain
Query: 1 CEFGIKLDTC 10
C FG + TC
Sbjct: 113 CGFGKTITTC 122
>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)
Query: 3 FGIKLDTC 10
FG LD C
Sbjct: 208 FGASLDAC 215
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 EFGIKLDTC 10
E G DTC
Sbjct: 385 ELGFNHDTC 393
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 EFGIKLDTC 10
E G DTC
Sbjct: 385 ELGFNHDTC 393
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 2 EFGIKLDT 9
EFG+ L+T
Sbjct: 257 EFGVLLET 264
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 2 EFGIKLDT 9
EFG+ L+T
Sbjct: 257 EFGVLLET 264
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 CEFGIK 6
C+FGI+
Sbjct: 1584 CKFGIQ 1589
>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 FGIKLDTC 10
FG LD C
Sbjct: 208 FGASLDAC 215
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 CEFGIKLD 8
C F +KLD
Sbjct: 120 CIFEVKLD 127
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 CEFGIKLD 8
C F +KLD
Sbjct: 120 CIFEVKLD 127
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 CEFGIKLD 8
C F +KLD
Sbjct: 122 CIFEVKLD 129
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 CEFGIKLD 8
C F +KLD
Sbjct: 122 CIFEVKLD 129
>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12
Query: 2 EFGIKLDT 9
+ G+K DT
Sbjct: 195 DIGVKFDT 202
>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5
Query: 2 EFGIKLDT 9
+ G+K DT
Sbjct: 205 DIGVKFDT 212
>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2
Query: 2 EFGIKLDT 9
+ G+K DT
Sbjct: 205 DIGVKFDT 212
72|SequenceR|365|356|GAPCTCEFGI
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 GAPCTCEFGI 10
G CTC FG+
Sbjct: 3773 GFMCTCYFGV 3782
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 GAPCTCEFGI 10
G CTC FG+
Sbjct: 3773 GFMCTCYFGV 3782
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GAPCTCEFGI 10
G CTC FG+
Sbjct: 3787 GYFCTCYFGL 3796
Query: 3 PCTC 6
PCTC
Sbjct: 1786 PCTC 1789
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GAPCTCEFGI 10
G CTC FG+
Sbjct: 3787 GYFCTCYFGL 3796
Query: 3 PCTC 6
PCTC
Sbjct: 1786 PCTC 1789
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 APCTC 6
APCTC
Sbjct: 1121 APCTC 1125
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 1 GAPCTCEF 8
GAP TC++
Sbjct: 128 GAPNTCQW 135
>sp|CAPSH_ADE04|HEXON protein|Human adenovirus E serotype 4
Query: 1 GAPCTCEF 8
GAP TC++
Sbjct: 27 GAPNTCQW 34
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 GAPCT 5
GAPCT
Sbjct: 2082 GAPCT 2086
>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6
Query: 1 GAPCTCEF 8
GAP +CE+
Sbjct: 9 GAPNSCEW 16
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 1 GAPCTCEF 8
GAP +CE+
Sbjct: 128 GAPNSCEW 135
>sp|CAPSH_ADE01|HEXON protein|Human adenovirus C serotype 1
Query: 1 GAPCTCEF 8
GAP +CE+
Sbjct: 9 GAPNSCEW 16
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 APCTC 6
APCTC
Sbjct: 1126 APCTC 1130
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 GAPCTC 6
GAP TC
Sbjct: 533 GAPATC 538
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 PCTCE 7
PC CE
Sbjct: 1648 PCLCE 1652
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 1 GAPCTCE 7
GAP CE
Sbjct: 688 GAPLPCE 694
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 4 CTCEFGI 10
CTCE +
Sbjct: 164 CTCELSM 170
Query: 3 PCTCE 7
PC CE
Sbjct: 93 PCFCE 97
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 CTCEFGI 10
CTCE +
Sbjct: 164 CTCELSM 170
Query: 3 PCTCE 7
PC CE
Sbjct: 93 PCFCE 97
>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)
Query: 3 PCTCE 7
PC CE
Sbjct: 93 PCYCE 97
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 GAPCTCEF 8
G PCT ++
Sbjct: 1490 GVPCTSQW 1497
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 APCTCEF 8
APC+C +
Sbjct: 1968 APCSCSW 1974
Query: 3 PCTC 6
PCTC
Sbjct: 1120 PCTC 1123
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GAPCTCEFGI 10
G C C FG+
Sbjct: 3764 GYCCCCYFGL 3773
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 1 GAPCTCEF 8
GAP CE+
Sbjct: 128 GAPNPCEW 135
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 3 PCTCEFGI 10
PC C + +
Sbjct: 1593 PCLCRYAM 1600
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 PCTCEFGI 10
PC C + +
Sbjct: 1595 PCLCRYAM 1602
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 3 PCTCEFGI 10
PC C + +
Sbjct: 1593 PCLCRYAM 1600
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 PCTCEFGI 10
PC C + +
Sbjct: 1592 PCLCRYAM 1599
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 PCTCEFGI 10
PC C + +
Sbjct: 1592 PCLCRYAM 1599
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 PCTCEFGI 10
PC C + +
Sbjct: 1594 PCLCRYAM 1601
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 PCTCEFGI 10
PC C + +
Sbjct: 1594 PCLCRYAM 1601
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 PCTCEFGI 10
PC C + +
Sbjct: 1594 PCLCRYAM 1601
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 PCTCEFGI 10
PC C + +
Sbjct: 1594 PCLCRYAM 1601
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GAPCTCEFGI 10
G C C FG+
Sbjct: 3764 GYCCCCYFGL 3773
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 PCTCEFGI 10
PC C + +
Sbjct: 1587 PCLCNYAM 1594
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 PCTCEFGI 10
PC C + +
Sbjct: 1588 PCLCNYAM 1595
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 PCTCEFGI 10
PC C + +
Sbjct: 1588 PCLCNYAM 1595
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 APCTCEFGI 10
APC C I
Sbjct: 455 APCRCRTAI 463
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 3 PCTCEFGI 10
PC C + +
Sbjct: 261 PCLCRYAM 268
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 3 PCTCEFGI 10
PC C + +
Sbjct: 1597 PCLCRYAM 1604
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 PCTCEFGI 10
PC C + +
Sbjct: 1588 PCLCNYAM 1595
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 PCTCEFGI 10
PC C + +
Sbjct: 1594 PCLCRYAM 1601
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GAPCTCE 7
G PCT E
Sbjct: 180 GIPCTIE 186
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 GAPCT 5
G+PCT
Sbjct: 2017 GSPCT 2021
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 GAPCT 5
G+PCT
Sbjct: 2008 GSPCT 2012
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 GAPCT 5
G+PCT
Sbjct: 2009 GSPCT 2013
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GAPCT 5
G+PCT
Sbjct: 2042 GSPCT 2046
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GAPCT 5
G+PCT
Sbjct: 2041 GSPCT 2045
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GAPCT 5
G+PCT
Sbjct: 2041 GSPCT 2045
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GAPCT 5
G+PCT
Sbjct: 2042 GSPCT 2046
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GAPCT 5
G+PCT
Sbjct: 2041 GSPCT 2045
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GAPCT 5
G+PCT
Sbjct: 1875 GSPCT 1879
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GAPCT 5
G+PCT
Sbjct: 2041 GSPCT 2045
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GAPCT 5
G+PCT
Sbjct: 2041 GSPCT 2045
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GAPCT 5
G+PCT
Sbjct: 2039 GSPCT 2043
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GAPCT 5
G+PCT
Sbjct: 2041 GSPCT 2045
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GAPCTCEFG 9
G P C FG
Sbjct: 1166 GGPLLCPFG 1174
Query: 3 PCTC 6
PCTC
Sbjct: 1122 PCTC 1125
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 PCTC 6
PCTC
Sbjct: 1126 PCTC 1129
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 APCTCEFGI 10
A C C+ G+
Sbjct: 916 ARCNCQTGV 924
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 PCTC 6
PCTC
Sbjct: 1126 PCTC 1129
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 APCTCEFGI 10
A C C+ G+
Sbjct: 916 ARCNCQTGV 924
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 APCTCEFGI 10
A C C+ G+
Sbjct: 916 ARCNCQTGV 924
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 APCTCEFGI 10
APC C I
Sbjct: 455 APCHCRTAI 463
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 PCTC 6
PCTC
Sbjct: 1130 PCTC 1133
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 APCTCEFGI 10
APC C I
Sbjct: 455 APCHCRTAI 463
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 APCTCEFGI 10
APC C I
Sbjct: 455 APCHCRTAI 463
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 APCTCEFGI 10
A C C+ G+
Sbjct: 916 ARCNCQTGV 924
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 PCTC 6
PCTC
Sbjct: 1126 PCTC 1129
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 PCTC 6
PCTC
Sbjct: 1127 PCTC 1130
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 PCTC 6
PCTC
Sbjct: 1126 PCTC 1129
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 PCTC 6
PCTC
Sbjct: 1124 PCTC 1127
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 PCTC 6
PCTC
Sbjct: 1122 PCTC 1125
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 PCTC 6
PCTC
Sbjct: 1126 PCTC 1129
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 PCTC 6
PCTC
Sbjct: 1122 PCTC 1125
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 PCTC 6
PCTC
Sbjct: 1122 PCTC 1125
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 PCTC 6
PCTC
Sbjct: 1122 PCTC 1125
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 GAPCT 5
G+PCT
Sbjct: 172 GSPCT 176
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 PCTC 6
PCTC
Sbjct: 1128 PCTC 1131
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 PCTC 6
PCTC
Sbjct: 1122 PCTC 1125
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 PCTC 6
PCTC
Sbjct: 1122 PCTC 1125
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 PCTC 6
PCTC
Sbjct: 1126 PCTC 1129
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 PCTC 6
PCTC
Sbjct: 1127 PCTC 1130
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 PCTC 6
PCTC
Sbjct: 1122 PCTC 1125
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 PCTC 6
PCTC
Sbjct: 1123 PCTC 1126
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 PCTC 6
PCTC
Sbjct: 1122 PCTC 1125
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 PCTC 6
PCTC
Sbjct: 1122 PCTC 1125
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PCTCEF 8
P TCE+
Sbjct: 77 PITCEY 82
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PCTCEF 8
P TCE+
Sbjct: 77 PITCEY 82
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PCTCEF 8
P TCE+
Sbjct: 77 PITCEY 82
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 3 PCTCEF 8
PC C++
Sbjct: 264 PCDCDW 269
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 3 PCTCEF 8
PC C++
Sbjct: 226 PCDCDW 231
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 3 PCTCEF 8
PC C++
Sbjct: 261 PCDCDW 266
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 3 PCTCEF 8
PC C++
Sbjct: 289 PCDCDW 294
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 3 PCTCEF 8
PC C++
Sbjct: 289 PCDCDW 294
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 PCTC 6
PCTC
Sbjct: 1122 PCTC 1125
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 3 PCTCE 7
PC C+
Sbjct: 486 PCVCQ 490
>sp|US09_HCMVM|MEMBRANE glycoprotein US9|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 APCTCEF 8
+P TC F
Sbjct: 5 SPSTCSF 11
>sp|US09_HCMVA|UNIQUE short US9 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 APCTCEF 8
+P TC F
Sbjct: 5 SPSTCSF 11
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 GAPCTC 6
APC C
Sbjct: 454 AAPCRC 459
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 APCTC 6
APC C
Sbjct: 455 APCHC 459
73|SequenceR|370|361|DLLQFGAPCT
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 1 DLLQFGAPC 9
DL+ FGA C
Sbjct: 760 DLVHFGASC 768
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 1 DLLQFGAP 8
DLL+ GAP
Sbjct: 407 DLLRSGAP 414
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 1 DLLQFGAPCT 10
+LLQ PCT
Sbjct: 343 NLLQDWGPCT 352
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 1 DLLQFGAPCT 10
+LLQ PCT
Sbjct: 343 NLLQDWGPCT 352
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 1 DLLQFGAP 8
DLL+ GAP
Sbjct: 407 DLLRNGAP 414
>sp|NCAP_INBSI|NUCLEOPROTEIN B virus (strain B/Singapore/222/1979)
Query: 3 LQFGAPCT 10
LQF AP T
Sbjct: 439 LQFWAPMT 446
>sp|NCAP_INBP9|NUCLEOPROTEIN B virus (strain B/Panama/45/1990)
Query: 3 LQFGAPCT 10
LQF AP T
Sbjct: 439 LQFWAPMT 446
>sp|NCAP_INBLE|NUCLEOPROTEIN B virus (strain B/Lee/1940)
Query: 3 LQFGAPCT 10
LQF AP T
Sbjct: 439 LQFWAPMT 446
>sp|NCAP_INBAD|NUCLEOPROTEIN B virus (strain B/Ann
Query: 3 LQFGAPCT 10
LQF AP T
Sbjct: 439 LQFWAPMT 446
>sp|NCAP_INBAC|NUCLEOPROTEIN B virus (strain B/Ann
Query: 3 LQFGAPCT 10
LQF AP T
Sbjct: 439 LQFWAPMT 446
>sp|NCAP_INBAA|NUCLEOPROTEIN B virus (strain B/Ann
Query: 3 LQFGAPCT 10
LQF AP T
Sbjct: 439 LQFWAPMT 446
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 DLLQFGAP 8
DL+ +G P
Sbjct: 1573 DLISYGGP 1580
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 DLLQFGAP 8
DL+ +G P
Sbjct: 1574 DLISYGGP 1581
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 DLLQFGAP 8
DL+ +G P
Sbjct: 1578 DLISYGGP 1585
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 1 DLLQFGAP 8
D L+FG+P
Sbjct: 342 DGLEFGSP 349
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 DLLQFGAP 8
DLLQ G P
Sbjct: 866 DLLQRGQP 873
>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P
Query: 1 DLLQFGAPCT 10
+ L FGA CT
Sbjct: 281 NRLVFGAVCT 290
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 DLLQFGAPC 9
DL+Q PC
Sbjct: 237 DLVQSSNPC 245
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 3 LQFGAP 8
LQFG P
Sbjct: 3098 LQFGPP 3103
74|SequenceR|375|366|GCTKQDLLQF
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 CTKQDLLQF 10
C K D LQ+
Sbjct: 169 CMKSDTLQY 177
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 CTKQDLLQF 10
C K D LQ+
Sbjct: 169 CMKSDTLQY 177
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 CTKQDLLQF 10
C K D LQ+
Sbjct: 168 CMKSDTLQY 176
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 CTKQDLLQF 10
C K D LQ+
Sbjct: 167 CMKSDTLQY 175
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 CTKQDLLQF 10
C K D LQ+
Sbjct: 169 CMKSDTLQY 177
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 5 QDLLQF 10
QDLLQ+
Sbjct: 186 QDLLQY 191
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 5 QDLLQF 10
QDLLQ+
Sbjct: 186 QDLLQY 191
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 5 QDLLQF 10
QDLLQ+
Sbjct: 186 QDLLQY 191
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 5 QDLLQF 10
QDLLQ+
Sbjct: 186 QDLLQY 191
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 5 QDLLQF 10
QDLLQ+
Sbjct: 186 QDLLQY 191
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 5 QDLLQF 10
QDLLQ+
Sbjct: 186 QDLLQY 191
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 5 QDLLQF 10
QDLLQ+
Sbjct: 192 QDLLQY 197
>sp|PAP1_MCV1|POLY(A) polymerase catalytic subunit|Molluscum contagiosum virus subtype 1
Query: 1 GCTKQDLL 8
GC Q+LL
Sbjct: 423 GCNYQELL 430
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 5 QDLLQF 10
QDLLQ+
Sbjct: 186 QDLLQY 191
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 5 QDLLQF 10
QDLLQ+
Sbjct: 186 QDLLQY 191
>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1
Query: 5 QDLLQF 10
QDLLQ+
Sbjct: 186 QDLLQY 191
>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2
Query: 5 QDLLQF 10
QDLLQ+
Sbjct: 192 QDLLQY 197
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 5 QDLLQF 10
QDLLQ+
Sbjct: 186 QDLLQY 191
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 CTKQD 6
CT+QD
Sbjct: 764 CTRQD 768
>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2
Query: 5 QDLLQF 10
QDLLQ+
Sbjct: 192 QDLLQY 197
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 CTKQDLL 8
CT +D+L
Sbjct: 3307 CTSEDML 3313
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 CTKQDLL 8
CT +D+L
Sbjct: 3307 CTSEDML 3313
>sp|UL117_HCMVM|PROTEIN UL117|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GCTKQDLL 8
G TK+DL
Sbjct: 370 GATKKDLF 377
>sp|UL117_HCMVA|PROTEIN UL117|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GCTKQDLL 8
G TK+DL
Sbjct: 369 GATKKDLF 376
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 CTKQDLL 8
CT +D+L
Sbjct: 3284 CTAEDML 3290
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 CTKQDLL 8
CT +D+L
Sbjct: 3284 CTAEDML 3290
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d
Query: 1 GCTKQDLLQF 10
GC K LQ+
Sbjct: 18 GCPKCSALQY 27
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 GCTKQDLLQF 10
GC K LQ+
Sbjct: 18 GCPKCSALQY 27
75|SequenceR|380|371|CEDIDGCTKQ
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 1 CEDIDG 6
CEDI+G
Sbjct: 342 CEDIEG 347
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 1 CEDIDG 6
CEDI+G
Sbjct: 342 CEDIEG 347
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 1 CEDIDG 6
CEDI+G
Sbjct: 342 CEDIEG 347
>sp|NEP_INCJJ|NUCLEAR export protein|Influenza C virus (strain C/JJ/1950)
Query: 2 EDIDGCTK 9
ED+D CT+
Sbjct: 24 EDLDTCTE 31
>sp|NEP_INCCA|NUCLEAR export protein|Influenza C virus (strain C/California/1978)
Query: 2 EDIDGCTK 9
ED+D CT+
Sbjct: 24 EDLDTCTE 31
>sp|NEP_INCYA|NUCLEAR export protein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 2 EDIDGCTK 9
ED+D CT+
Sbjct: 19 EDLDTCTE 26
>sp|NEP_INCY6|NUCLEAR export protein|Influenza C virus (strain C/Yamagata/1964)
Query: 2 EDIDGCTK 9
ED+D CT+
Sbjct: 24 EDLDTCTE 31
>sp|NEP_INCTA|NUCLEAR export protein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 EDIDGCTK 9
ED+D CT+
Sbjct: 19 EDLDTCTE 26
>sp|NEP_INCJH|NUCLEAR export protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 EDIDGCTK 9
ED+D CT+
Sbjct: 19 EDLDTCTE 26
>sp|NEP_INCGL|NUCLEAR export protein|Influenza C virus (strain C/Great
Query: 2 EDIDGCTK 9
ED+D CT+
Sbjct: 19 EDLDTCTE 26
>sp|NEP_INCMI|NUCLEAR export protein|Influenza C virus (strain C/Mississippi/1980)
Query: 2 EDIDGCTK 9
ED+D CT+
Sbjct: 19 EDLDTCTE 26
>sp|NS1_INCYA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/10/1981)
Query: 2 EDIDGCTK 9
ED+D CT+
Sbjct: 19 EDLDTCTE 26
>sp|NEP_INCHY|NUCLEAR export protein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 EDIDGCTK 9
ED+D CT+
Sbjct: 24 EDLDTCTE 31
>sp|NEP_INCAA|NUCLEAR export protein|Influenza C virus (strain C/Ann
Query: 2 EDIDGCTK 9
ED+D CT+
Sbjct: 24 EDLDTCTE 31
>sp|NS1_INCTA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 EDIDGCTK 9
ED+D CT+
Sbjct: 19 EDLDTCTE 26
>sp|NS1_INCJH|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 EDIDGCTK 9
ED+D CT+
Sbjct: 19 EDLDTCTE 26
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 4 IDGCTKQ 10
++GCTK+
Sbjct: 2526 LNGCTKE 2532
>sp|NS1_INCMI|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Mississippi/1980)
Query: 2 EDIDGCTK 9
ED+D CT+
Sbjct: 19 EDLDTCTE 26
>sp|NS1_INCHY|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 EDIDGCTK 9
ED+D CT+
Sbjct: 24 EDLDTCTE 31
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 1 CEDIDG 6
CE IDG
Sbjct: 327 CEQIDG 332
>sp|NS1_INCGL|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Great
Query: 2 EDIDGCTK 9
ED+D CT+
Sbjct: 19 EDLDTCTE 26
>sp|NS1_INCY6|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/1964)
Query: 2 EDIDGCTK 9
ED+D CT+
Sbjct: 24 EDLDTCTE 31
>sp|NS1_INCCA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/California/1978)
Query: 2 EDIDGCTK 9
ED+D CT+
Sbjct: 24 EDLDTCTE 31
>sp|NS1_INCAA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Ann
Query: 2 EDIDGCTK 9
ED+D CT+
Sbjct: 24 EDLDTCTE 31
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 CEDIDGCTKQ 10
CE DG T Q
Sbjct: 1484 CEYFDGYTGQ 1493
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 1 CEDIDG 6
CE IDG
Sbjct: 327 CEKIDG 332
>sp|PG065_MONPV|RNA-BINDING protein OPG065|Monkeypox virus (MPXV)
Query: 1 CEDIDG 6
C DIDG
Sbjct: 114 CVDIDG 119
>sp|NSP5_ROTHC|NON-STRUCTURAL protein 5|Rotavirus C (isolate RVC/Human/United
Query: 2 EDIDGC 7
EDI+GC
Sbjct: 178 EDIEGC 183
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CEDIDGCT 8
C D DG T
Sbjct: 2586 CYDFDGVT 2593
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 4 IDGCTKQ 10
+DGC K
Sbjct: 648 VDGCDKH 654
>sp|LHDAG_HDVV2|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 4 IDGCTKQ 10
+ GCT+Q
Sbjct: 208 VPGCTQQ 214
>sp|LHDAG_HDVP1|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 4 IDGCTKQ 10
+ GCT+Q
Sbjct: 208 VPGCTQQ 214
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CEDIDGCT 8
C D DG T
Sbjct: 2586 CYDFDGVT 2593
>sp|LHDAG_HDVV1|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 4 IDGCTKQ 10
+ GCT+Q
Sbjct: 208 VPGCTQQ 214
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 2 EDIDGCTK 9
E+ID C +
Sbjct: 299 EEIDACLR 306
>sp|LHDAG_HDVV3|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 4 IDGCTKQ 10
+ GCT+Q
Sbjct: 208 VPGCTQQ 214
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 CEDIDGC 7
CE +D C
Sbjct: 368 CESVDAC 374
>sp|PG137_VACCC|PROTEIN OPG137|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 EDIDGCTK 9
ED+D C++
Sbjct: 213 EDLDVCSE 220
>sp|PG137_VACCA|PROTEIN OPG137|Vaccinia virus (strain Ankara) (VACV)
Query: 2 EDIDGCTK 9
ED+D C++
Sbjct: 213 EDLDVCSE 220
>sp|PG137_MONPV|PROTEIN OPG137|Monkeypox virus (MPXV)
Query: 2 EDIDGCTK 9
ED+D C++
Sbjct: 213 EDLDVCSE 220
>sp|PG137_VARV|PROTEIN OPG137|Variola virus
Query: 2 EDIDGCTK 9
ED+D C++
Sbjct: 214 EDLDVCSE 221
>sp|PG137_VAR67|PROTEIN OPG137|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 EDIDGCTK 9
ED+D C++
Sbjct: 214 EDLDVCSE 221
>sp|PG065_VAR67|RNA-BINDING protein OPG065|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 CEDIDG 6
C DIDG
Sbjct: 151 CVDIDG 156
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 CEDIDGCTK 9
CE ++G T+
Sbjct: 977 CEAVEGSTE 985
76|SequenceR|385|376|ADPDKCEDID
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ADPDKCEDI 9
ADPD ED+
Sbjct: 555 ADPDNMEDV 563
>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996
Query: 2 DPDKC 6
DPDKC
Sbjct: 125 DPDKC 129
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 6 CEDID 10
CEDID
Sbjct: 170 CEDID 174
>sp|VCYCL_HHV8P|VIRAL cyclin homolog|Human herpesvirus 8 type P
Query: 2 DPDKCED 8
DP CED
Sbjct: 13 DPTLCED 19
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 2 DPDKCEDID 10
DPD C +D
Sbjct: 121 DPDGCYRVD 129
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 3 PDKCE 7
PD+CE
Sbjct: 17 PDRCE 21
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 5 KCEDID 10
KC DID
Sbjct: 2224 KCPDID 2229
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 4 DKCEDI 9
D+CED+
Sbjct: 111 DRCEDV 116
>sp|BVLF1_EBVB9|LATE gene expression regulator BVLF1|Epstein-Barr virus (strain B95-8)
Query: 2 DPDKCEDI 9
DP +CE++
Sbjct: 255 DPLQCEEL 262
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 DPDKCEDID 10
DPD +ID
Sbjct: 1459 DPDPVSEID 1467
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 DPDKCEDID 10
DPD +ID
Sbjct: 1459 DPDPVSEID 1467
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 2 DPDKCEDI 9
+PD+C +
Sbjct: 306 NPDRCHSL 313
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 3 PDKCED 8
PD CED
Sbjct: 1187 PDFCED 1192
>sp|VP22_HHV2H|TEGUMENT protein VP22|Human herpesvirus 2 (strain HG52)
Query: 2 DPDKCEDID 10
+PD +D+D
Sbjct: 260 NPDAAQDVD 268
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ADPDKCEDI 9
A P K ED+
Sbjct: 77 ASPIKAEDV 85
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 1 ADPDKCEDI 9
A P K ED+
Sbjct: 77 ASPIKAEDV 85
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 PDKCED 8
PDK ED
Sbjct: 671 PDKFED 676
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 2 DPDKCEDI 9
D D C+DI
Sbjct: 380 DFDDCKDI 387
77|SequenceR|390|381|CIQSCADPDK
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 CIQSCADP 8
C++ C DP
Sbjct: 790 CMRECQDP 797
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 CIQSCADP 8
C++ C DP
Sbjct: 790 CMRECQDP 797
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 SCADPDK 10
+C DPDK
Sbjct: 199 TCRDPDK 205
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CIQSCADP 8
CI +C +P
Sbjct: 671 CIDNCGEP 678
Query: 2 IQSCADPDK 10
I C DP+K
Sbjct: 3560 INLCDDPEK 3568
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 2 IQSCADP 8
+Q+C+DP
Sbjct: 646 MQNCSDP 652
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 2 IQSCADP 8
+Q+C+DP
Sbjct: 646 MQNCSDP 652
>sp|CEP1_HHV8P|CYTOPLASMIC envelopment protein 1|Human herpesvirus 8 type P
Query: 3 QSCADP 8
Q+CADP
Sbjct: 234 QTCADP 239
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CIQSCADP 8
CI +C +P
Sbjct: 671 CIDNCGEP 678
Query: 2 IQSCADPDK 10
I C DP+K
Sbjct: 3560 INLCDDPEK 3568
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 SCADPDK 10
+C DPDK
Sbjct: 130 TCRDPDK 136
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 CIQSCADPD 9
C CA PD
Sbjct: 2217 CTTHCAHPD 2225
>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CIQSCA 6
C+Q CA
Sbjct: 97 CVQDCA 102
>sp|GP42_EBVA8|GLYCOPROTEIN 42|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 CIQSCAD 7
C Q+CA+
Sbjct: 128 CFQACAE 134
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 1 CIQSCAD 7
CI SC D
Sbjct: 200 CILSCID 206
>sp|GP42_EBVG|GLYCOPROTEIN 42|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 CIQSCAD 7
C Q+CA+
Sbjct: 128 CFQACAE 134
>sp|GP42_EBVB9|GLYCOPROTEIN 42|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CIQSCAD 7
C Q+CA+
Sbjct: 128 CFQACAE 134
>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)
Query: 2 IQSCADPDK 10
I C DP++
Sbjct: 28 IPKCPDPER 36
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 5 CADPD 9
C DPD
Sbjct: 549 CQDPD 553
>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)
Query: 2 IQSCADPDK 10
I C DP++
Sbjct: 28 IPKCPDPER 36
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 1 CIQSCAD 7
CI SC D
Sbjct: 210 CILSCID 216
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 5 CADPD 9
C DPD
Sbjct: 309 CLDPD 313
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 CIQSCAD 7
CI +C D
Sbjct: 1998 CITACKD 2004
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 CIQSCAD 7
CI SC D
Sbjct: 210 CILSCID 216
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 5 CADPDK 10
CA PD+
Sbjct: 262 CAGPDR 267
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 4 SCADPD 9
+C DPD
Sbjct: 199 TCRDPD 204
>sp|K6_HHV8P|PROTEIN K6|Human herpesvirus 8 type P
Query: 3 QSCADPDK 10
Q CADP K
Sbjct: 74 QICADPSK 81
>sp|NEF_HV1RH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 CIQSCADPDK 10
C+ DP+K
Sbjct: 171 CLHGMDDPEK 180
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 1 CIQSCADPD 9
CI S + PD
Sbjct: 218 CISSYSKPD 226
>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P
Query: 1 CIQSCA 6
CI+SC
Sbjct: 239 CIKSCG 244
78|SequenceR|395|386|GKYNVCIQSC
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 2 KYNVCIQSC 10
KYN+C+ C
Sbjct: 618 KYNICMGKC 626
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 2 KYNVCIQSC 10
KYN+C+ C
Sbjct: 618 KYNICMGKC 626
>sp|PG087_VACCC|LATE transcription elongation factor OPG087|Vaccinia virus (strain
Query: 2 KYNVCIQSC 10
KY+ CI+ C
Sbjct: 85 KYSKCIRPC 93
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 4 NVCIQSC 10
N+C QSC
Sbjct: 588 NICDQSC 594
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 4 NVCIQSC 10
N+C QSC
Sbjct: 589 NICDQSC 595
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 4 NVCIQSC 10
N+C QSC
Sbjct: 582 NICDQSC 588
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 4 NVCIQSC 10
N+C QSC
Sbjct: 575 NICDQSC 581
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 4 NVCIQSC 10
N+C QSC
Sbjct: 576 NICDQSC 582
>sp|PG087_VARV|LATE transcription elongation factor OPG087|Variola virus
Query: 2 KYNVCIQSC 10
KY+ CI+ C
Sbjct: 85 KYSKCIRPC 93
>sp|PG087_VAR67|LATE transcription elongation factor OPG087|Variola virus (isolate
Query: 2 KYNVCIQSC 10
KY+ CI+ C
Sbjct: 85 KYSKCIRPC 93
>sp|ORF11_HHV8P|PROTEIN ORF11|Human herpesvirus 8 type P
Query: 4 NVCIQSC 10
N+C+ SC
Sbjct: 51 NICLPSC 57
>sp|NSP3_ROTHC|NON-STRUCTURAL protein 3|Rotavirus C (isolate RVC/Human/United
Query: 1 GKYNVCI 7
G YN CI
Sbjct: 55 GVYNACI 61
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 4 NVCIQSC 10
N+C QSC
Sbjct: 576 NICDQSC 582
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 4 NVCIQSC 10
N+C QSC
Sbjct: 575 NICDQSC 581
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 4 NVCIQSC 10
N+C QSC
Sbjct: 575 NICDQSC 581
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 4 NVCIQSC 10
N+C QSC
Sbjct: 575 NICDQSC 581
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 4 NVCIQSC 10
N+C QSC
Sbjct: 576 NICDQSC 582
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 4 NVCIQSC 10
N+C QSC
Sbjct: 582 NICDQSC 588
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 4 NVCIQSC 10
N+C QSC
Sbjct: 589 NICDQSC 595
>sp|IR06_HCMVM|UNCHARACTERIZED protein IRL6|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GKYNVCIQSC 10
G +C+ SC
Sbjct: 61 GNATICVSSC 70
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 4 NVCIQSC 10
N+C QSC
Sbjct: 576 NICDQSC 582
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 4 NVCIQSC 10
N+C QSC
Sbjct: 576 NICDQSC 582
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 4 NVCIQSC 10
N+C QSC
Sbjct: 576 NICDQSC 582
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 4 NVCIQSC 10
N+C QSC
Sbjct: 576 NICDQSC 582
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 GKYNVCIQSC 10
GK+N+ Q C
Sbjct: 1112 GKWNINKQIC 1121
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 GKYNVCIQSC 10
GK+N+ Q C
Sbjct: 1112 GKWNINKQIC 1121
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 GKYNVCIQSC 10
GK+N+ Q C
Sbjct: 1112 GKWNINKQIC 1121
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 GKYNVCIQSC 10
GK+N+ Q C
Sbjct: 1112 GKWNINKQIC 1121
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 4 NVCIQSC 10
++C+ SC
Sbjct: 632 DICLTSC 638
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GKYNVC 6
G YN+C
Sbjct: 759 GLYNIC 764
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 5 VCIQSC 10
VC+ SC
Sbjct: 13 VCVVSC 18
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 5 VCIQSC 10
VC+ SC
Sbjct: 13 VCVVSC 18
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GKYNVC 6
G YN+C
Sbjct: 767 GLYNIC 772
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GKYNVC 6
G YN+C
Sbjct: 858 GGYNLC 863
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GKYNVC 6
G YN+C
Sbjct: 769 GLYNIC 774
79|SequenceR|400|391|ECKFYGKYNV
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 ECKFYGKYN 9
+CKFY Y+
Sbjct: 1422 DCKFYDGYS 1430
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 ECKFYGKYN 9
+CKFY Y+
Sbjct: 1419 DCKFYDGYS 1427
>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)
Query: 4 FYGKYN 9
FYG YN
Sbjct: 222 FYGLYN 227
>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 FYGKYN 9
FYG YN
Sbjct: 222 FYGLYN 227
>sp|GL_HCMVA|ENVELOPE glycoprotein L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 FYGKYN 9
FYG YN
Sbjct: 222 FYGLYN 227
>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)
Query: 4 FYGKYN 9
FYG YN
Sbjct: 222 FYGLYN 227
>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)
Query: 4 FYGKYN 9
FYG YN
Sbjct: 222 FYGLYN 227
>sp|GL_HCMV6|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5040) (HHV-5)
Query: 4 FYGKYN 9
FYG YN
Sbjct: 222 FYGLYN 227
>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)
Query: 4 FYGKYN 9
FYG YN
Sbjct: 222 FYGLYN 227
>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)
Query: 4 FYGKYN 9
FYG YN
Sbjct: 222 FYGLYN 227
>sp|GL_HCMV3|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 2387) (HHV-5)
Query: 4 FYGKYN 9
FYG YN
Sbjct: 222 FYGLYN 227
>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)
Query: 4 FYGKYN 9
FYG YN
Sbjct: 222 FYGLYN 227
>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)
Query: 4 FYGKYN 9
FYG YN
Sbjct: 222 FYGLYN 227
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 5 YGKYNV 10
YG+YN+
Sbjct: 2369 YGQYNL 2374
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 5 YGKYNV 10
YG+YN+
Sbjct: 2367 YGQYNL 2372
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 3 KFYGKY 8
+FYG+Y
Sbjct: 374 EFYGEY 379
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 3 KFYGKY 8
+FYG+Y
Sbjct: 374 EFYGEY 379
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 3 KFYGKY 8
+FYG+Y
Sbjct: 374 EFYGEY 379
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 3 KFYGKY 8
+FYG+Y
Sbjct: 374 EFYGEY 379
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 2 CKFYGKY 8
C F+G Y
Sbjct: 462 CGFHGSY 468
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 CKFYGKYNV 10
C F+GK ++
Sbjct: 383 CGFFGKGSI 391
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 CKFYGKY 8
CK+ GK+
Sbjct: 4327 CKYKGKF 4333
>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)
Query: 1 ECKFYGKYNV 10
E ++GK+N+
Sbjct: 666 EVFYFGKFNI 675
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 1 ECKFYGKYNV 10
E ++GK+N+
Sbjct: 665 EVFYFGKFNI 674
>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate
Query: 1 ECKFYGKYNV 10
E ++GK+N+
Sbjct: 665 EVFYFGKFNI 674
>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 ECKFYGKYNV 10
E ++GK+N+
Sbjct: 665 EVFYFGKFNI 674
>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 ECKFYGKYNV 10
E ++GK+N+
Sbjct: 665 EVFYFGKFNI 674
>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 1 ECKFYGKYNV 10
E ++GK+N+
Sbjct: 665 EVFYFGKFNI 674
>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 KFYGKY 8
+FYG Y
Sbjct: 446 RFYGPY 451
>sp|UL84_HCMVM|PROTEIN UL84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 KFYGKY 8
+FYG Y
Sbjct: 446 RFYGPY 451
>sp|UL84_HCMVA|PROTEIN UL84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 KFYGKY 8
+FYG Y
Sbjct: 445 RFYGPY 450
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 2 CKFYGK 7
C FYG+
Sbjct: 690 CVFYGQ 695
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 CKFYGK 7
C FYG+
Sbjct: 690 CVFYGQ 695
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 3 KFYGKYN 9
+FY +YN
Sbjct: 1121 EFYQRYN 1127
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 CKFYGKY 8
CK+ GK+
Sbjct: 4327 CKYKGKF 4333
>sp|Z_MACHU|RING finger protein Z|Machupo virus (MACV)
Query: 4 FYGKYN 9
YG+YN
Sbjct: 33 LYGRYN 38
>sp|VP7_ROTHU|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 3 KFYGKYNV 10
+FY YNV
Sbjct: 132 QFYCDYNV 139
>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus
Query: 1 ECKFYGKYNV 10
E ++GK+N+
Sbjct: 665 EVFYFGKFNI 674
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 5 YGKYN 9
+GKYN
Sbjct: 1803 FGKYN 1807
>sp|VE2_HPV45|REGULATORY protein E2|Human papillomavirus 45
Query: 1 ECKFYGKYN 9
EC+ YG N
Sbjct: 181 ECEKYGNSN 189
>sp|Z_JUNIN|RING finger protein Z|Junin mammarenavirus (JUNV) (Junn
Query: 4 FYGKYN 9
YG+YN
Sbjct: 33 LYGRYN 38
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 KFYGKYNV 10
K+Y KY+V
Sbjct: 674 KWYKKYHV 681
80|SequenceR|405|396|YGPYCECKFY
>sp|VE7_HPV56|PROTEIN E7|Human papillomavirus 56
Query: 3 PYCECKF 9
P CECKF
Sbjct: 64 PCCECKF 70
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 PYCECK 8
PYC CK
Sbjct: 629 PYCRCK 634
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PYCECK 8
PYC CK
Sbjct: 629 PYCRCK 634
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PYCECK 8
PYC CK
Sbjct: 629 PYCRCK 634
>sp|RUVV_MONPV|RESOLVASE OPG149|Monkeypox virus (MPXV)
Query: 1 YGPYCECKF 9
Y PY CK+
Sbjct: 172 YTPYNRCKY 180
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YGPYCEC 7
Y +CEC
Sbjct: 277 YAAFCEC 283
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YGPYCEC 7
Y +CEC
Sbjct: 277 YAAFCEC 283
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 PYCECK 8
P CEC+
Sbjct: 131 PRCECQ 136
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 YGPYCE 6
+GP+C+
Sbjct: 1478 FGPFCD 1483
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 YGPYCE 6
+GP+C+
Sbjct: 1479 FGPFCD 1484
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 GPYCE 6
GPYC+
Sbjct: 506 GPYCD 510
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 2 GPYCE 6
GPYC+
Sbjct: 506 GPYCD 510
>sp|RUVV_VACCC|RESOLVASE OPG149|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YGPYCECK 8
Y PY CK
Sbjct: 161 YTPYNRCK 168
>sp|RUVV_VACCA|HOLLIDAY junction resolvase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 YGPYCECK 8
Y PY CK
Sbjct: 172 YTPYNRCK 179
>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)
Query: 2 GPYCE 6
GPYC+
Sbjct: 497 GPYCD 501
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 5 CECKF 9
CEC F
Sbjct: 60 CECNF 64
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 5 CECKFY 10
C C FY
Sbjct: 688 CHCVFY 693
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 CECKFY 10
C C FY
Sbjct: 688 CHCVFY 693
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 4 YCEC 7
YCEC
Sbjct: 141 YCEC 144
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 4 YCEC 7
YCEC
Sbjct: 141 YCEC 144
>sp|PG089_VACCC|PUTATIVE nuclease OPG089|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YGPYCEC 7
Y P C+C
Sbjct: 308 YVPPCQC 314
>sp|PKG2_ADE02|PACKAGING protein 2|Human adenovirus C serotype 2
Query: 1 YGPYC 5
Y PYC
Sbjct: 171 YSPYC 175
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 5 CECK 8
CECK
Sbjct: 1648 CECK 1651
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 3 PYCECKFY 10
PY +C F+
Sbjct: 240 PYGDCMFF 247
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 3 PYCECKFY 10
PY +C F+
Sbjct: 242 PYGDCMFF 249
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 1 YGPYCECKFY 10
YGP K Y
Sbjct: 131 YGPLTRIKIY 140
>sp|PKG2_ADE05|PACKAGING protein 2|Human adenovirus C serotype 5
Query: 1 YGPYC 5
Y PYC
Sbjct: 172 YSPYC 176
>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain
Query: 1 YGPYCEC 7
YG + EC
Sbjct: 191 YGTFVEC 197
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 1 YGPYCEC 7
YG + EC
Sbjct: 191 YGTFVEC 197
81|SequenceR|410|401|LLDMEYGPYC
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 LDMEYGPYC 10
LDM GP C
Sbjct: 679 LDMSNGPTC 687
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 LDMEYGPYC 10
LDM GP C
Sbjct: 679 LDMSNGPTC 687
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 LDMEYGPYC 10
LDM GP C
Sbjct: 679 LDMSNGPTC 687
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 LDMEYGPYC 10
LDM GP C
Sbjct: 679 LDMSNGPTC 687
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 LLDMEYGP 8
L++ME+GP
Sbjct: 1975 LVEMEFGP 1982
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 2 LDMEYGPYC 10
LDM GP C
Sbjct: 680 LDMSDGPTC 688
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 2 LDMEYGPYC 10
LDM GP C
Sbjct: 679 LDMSDGPTC 687
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 LDMEYGPYC 10
LDM GP C
Sbjct: 680 LDMSDGPTC 688
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 LLDMEYGPY 9
LLD E PY
Sbjct: 1398 LLDREESPY 1406
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 LLDMEYGPY 9
LLD E PY
Sbjct: 1398 LLDREESPY 1406
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 LLDMEYGPY 9
LLD E PY
Sbjct: 1398 LLDREESPY 1406
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 LDMEYGPYC 10
LD+ GP C
Sbjct: 679 LDISNGPTC 687
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 LDMEYGPYC 10
LD+ GP C
Sbjct: 679 LDISNGPTC 687
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 1 LLDMEYGP 8
+L EYGP
Sbjct: 356 MLRAEYGP 363
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDEEAGP 20
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDEEAGP 20
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDEEAGP 20
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDEEAGP 20
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 MEYGPY 9
ME+ PY
Sbjct: 683 MEFSPY 688
Query: 4 MEYGP 8
+EYGP
Sbjct: 387 LEYGP 391
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDNEAGP 20
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 LDMEYGPYC 10
L ++YG +C
Sbjct: 752 LLLQYGSFC 760
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 3 DMEYGP 8
DME GP
Sbjct: 390 DMEIGP 395
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDNEAGP 20
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDNEAGP 20
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDNEAGP 20
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDEEAGP 20
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDEEAGP 20
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 4 MEYGPYC 10
+EYG +C
Sbjct: 832 VEYGSFC 838
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDEEAGP 20
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDEEAGP 20
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDEEAGP 20
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 LDMEYGPYC 10
L ++YG +C
Sbjct: 734 LLLQYGSFC 742
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDEEAGP 20
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 5 EYGPYC 10
EYG +C
Sbjct: 831 EYGTFC 836
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 6 YGPY 9
YGPY
Sbjct: 286 YGPY 289
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 6 YGPY 9
YGPY
Sbjct: 287 YGPY 290
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 6 YGPY 9
YGPY
Sbjct: 288 YGPY 291
>sp|ICP22_HHV11|TRANSCRIPTIONAL regulator ICP22|Human herpesvirus 1 (strain 17)
Query: 6 YGPYC 10
YGP C
Sbjct: 284 YGPEC 288
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 5 EYGPYC 10
EYG +C
Sbjct: 831 EYGTFC 836
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 1 LLDMEYG 7
LL+MEY
Sbjct: 110 LLEMEYA 116
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 5 EYGPYC 10
EYG +C
Sbjct: 823 EYGQFC 828
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 5 EYGPYC 10
EYG +C
Sbjct: 835 EYGTFC 840
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 6 YGPY 9
YGPY
Sbjct: 287 YGPY 290
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 LLDMEYG--PYC 10
+ D+EYG P C
Sbjct: 156 IYDLEYGDVPQC 167
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 6 YGPYC 10
YGP C
Sbjct: 280 YGPEC 284
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 LLDMEYG--PYC 10
+ D+EYG P C
Sbjct: 158 IYDLEYGDVPQC 169
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 LLDMEYG--PYC 10
+ D+EYG P C
Sbjct: 157 IYDLEYGDVPQC 168
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 LLDMEYG--PYC 10
+ D+EYG P C
Sbjct: 158 IYDLEYGDVPQC 169
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 LLDMEYG--PYC 10
+ D+EYG P C
Sbjct: 158 IYDLEYGDVPQC 169
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LLDMEYGP 8
LLD E GP
Sbjct: 13 LLDDEAGP 20
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 LLDMEYG 7
+ D+EYG
Sbjct: 156 MYDLEYG 162
82|SequenceR|415|406|KCNKTLLDME
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 CNKTLLD 8
C +TL+D
Sbjct: 382 CKRTLVD 388
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 CNKTLLD 8
C +TL+D
Sbjct: 382 CKRTLVD 388
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 CNKTLLD 8
C +TL+D
Sbjct: 382 CKRTLVD 388
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 KCNKTLLDM 9
+ NK LLD+
Sbjct: 338 EANKVLLDL 346
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 KCNKTLLDM 9
+ NK LLD+
Sbjct: 338 EANKVLLDL 346
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 KCNKTLLDM 9
+ NK LLD+
Sbjct: 338 EANKVLLDL 346
83|SequenceR|420|411|KGAAAKCNKT
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 3 AAAKCNK 9
A AKCNK
Sbjct: 355 AIAKCNK 361
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 AAAKCNK 9
A AKCNK
Sbjct: 355 AIAKCNK 361
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 6 KCNKT 10
KCNKT
Sbjct: 112 KCNKT 116
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 1 KGAAAKCNKT 10
KG+ +KC +T
Sbjct: 600 KGSNSKCTET 609
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 1 KGAAAKCNKT 10
KG A CN +
Sbjct: 181 KGVAKNCNNS 190
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 1 KGAAAKCNKT 10
KG A CN +
Sbjct: 169 KGVAKNCNNS 178
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 1 KGAAAKCNKT 10
KG A CN +
Sbjct: 175 KGVAKNCNNS 184
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 1 KGAAAKCNKT 10
KG A CN +
Sbjct: 175 KGVAKNCNNS 184
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 1 KGAAAKCNKT 10
KG A CN +
Sbjct: 169 KGVAKNCNNS 178
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 1 KGAAAKCNKT 10
KG A CN +
Sbjct: 169 KGVAKNCNNS 178
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 1 KGAAAKCNKT 10
KG A CN +
Sbjct: 169 KGVAKNCNNS 178
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 2 GAAAKCNKT 10
GAA NKT
Sbjct: 170 GAAVYANKT 178
>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27
Query: 3 AAAKCNKT 10
A KC+KT
Sbjct: 344 AGGKCDKT 351
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 1 KGAAAKCNKT 10
KG+ A C+ T
Sbjct: 390 KGSKAHCHLT 399
84|SequenceR|425|416|ILSPSKGAAA
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LSPSKGAA 9
L+PSKG A
Sbjct: 6580 LTPSKGPA 6587
>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 ILSPSKGA 8
ILSP KGA
Sbjct: 86 ILSPIKGA 93
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LSPSKGAAA 10
L PS+GAA
Sbjct: 519 LRPSRGAAG 527
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LSPSKGAAA 10
L PS+GAA
Sbjct: 519 LRPSRGAAG 527
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 1 ILSPSKGA 8
IL+P KGA
Sbjct: 86 ILTPIKGA 93
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 1 ILSPSKGAAA 10
+++PS+GA A
Sbjct: 158 LITPSRGATA 167
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 1 ILSPSKGAAA 10
+++PS+GA A
Sbjct: 158 LITPSRGATA 167
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 1 ILSPSKGAAA 10
+++PS+GA A
Sbjct: 158 LITPSRGATA 167
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 ILSPSKGA 8
+++PS+GA
Sbjct: 1251 VVNPSEGA 1258
85|SequenceR|430|421|HRNTFILSPS
>sp|VEMP_CVHOC|ENVELOPE small membrane protein|Human coronavirus OC43 (HCoV-OC43)
Query: 3 NTFILSPS 10
NT +LSPS
Sbjct: 50 NTLVLSPS 57
>sp|VEMP_CVHN5|ENVELOPE small membrane protein|Human coronavirus HKU1 (isolate N5)
Query: 3 NTFILSPS 10
N FI+SPS
Sbjct: 48 NIFIISPS 55
>sp|VEMP_CVHN2|ENVELOPE small membrane protein|Human coronavirus HKU1 (isolate N2)
Query: 3 NTFILSPS 10
N FI+SPS
Sbjct: 48 NIFIISPS 55
>sp|VEMP_CVHN1|ENVELOPE small membrane protein|Human coronavirus HKU1 (isolate N1)
Query: 3 NTFILSPS 10
N FI+SPS
Sbjct: 48 NFFIISPS 55
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 RNTFILSPS 10
RNT IL P+
Sbjct: 1508 RNTGILEPN 1516
>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 TFILSPS 10
TF++SPS
Sbjct: 540 TFVISPS 546
>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)
Query: 4 TFILSPS 10
TF++SPS
Sbjct: 540 TFVISPS 546
>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)
Query: 4 TFILSPS 10
TF++SPS
Sbjct: 540 TFVISPS 546
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 RNTFILSPS 10
RNT +L PS
Sbjct: 1846 RNTSLLQPS 1854
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 HRNTFIL 7
HR+ FIL
Sbjct: 1009 HRDNFIL 1015
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 HRNTFIL 7
HR+ FIL
Sbjct: 1009 HRDNFIL 1015
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 HRNTFIL 7
HR+ FIL
Sbjct: 1010 HRDNFIL 1016
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 HRNTFIL 7
HR+ FIL
Sbjct: 1009 HRDNFIL 1015
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 HRNTFILSP 9
HR LSP
Sbjct: 402 HRTVLTLSP 410
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 HRNTFIL 7
HR+ FIL
Sbjct: 1009 HRDNFIL 1015
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 HRNTFIL 7
HR+ FIL
Sbjct: 1009 HRDNFIL 1015
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 HRNTFIL 7
HR+ FIL
Sbjct: 1009 HRDNFIL 1015
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 HRNTFIL 7
HR+ FIL
Sbjct: 1009 HRDNFIL 1015
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 HRNTFIL 7
HR+ FIL
Sbjct: 1009 HRDNFIL 1015
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 HRNTFIL 7
HR+ FIL
Sbjct: 1009 HRDNFIL 1015
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 HRNTFIL 7
HR+ FIL
Sbjct: 1009 HRDNFIL 1015
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 HRNTFIL 7
HR+ FIL
Sbjct: 1010 HRDNFIL 1016
>sp|UL145_HCMVM|PROTEIN UL145|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HRNTFILSPS 10
H +FI SPS
Sbjct: 7 HYYSFISSPS 16
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HRNTFILS 8
H +TF+LS
Sbjct: 315 HLSTFVLS 322
86|SequenceR|435|426|IRRVEHRNTF
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 IRRVEHRNTF 10
IRRV H+N +
Sbjct: 137 IRRVIHKNRY 146
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 IRRVEHRNTF 10
IRRV H+N +
Sbjct: 137 IRRVIHKNRY 146
>sp|PB1F2_I96A3|PROTEIN PB1-F2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 IRRVEHRNT 9
I ++EHRN+
Sbjct: 27 IPKLEHRNS 35
>sp|PB1F2_I00A1|PROTEIN PB1-F2|Influenza A virus (strain A/New
Query: 1 IRRVEHRNT 9
I ++EHRN+
Sbjct: 27 IPKLEHRNS 35
>sp|PB1F2_I07A0|PROTEIN PB1-F2|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 IRRVEHRNT 9
I ++EHRN+
Sbjct: 27 IPKLEHRNS 35
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 3 RVEHRNTF 10
RVE RN F
Sbjct: 821 RVESRNNF 828
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 3 RVEHRNTF 10
R+E+RN F
Sbjct: 820 RIENRNNF 827
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 3 RVEHRNTF 10
R+E+RN F
Sbjct: 820 RIENRNNF 827
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 3 RVEHRNTF 10
R EH NTF
Sbjct: 525 RGEHGNTF 532
>sp|PB1F2_I96A2|PROTEIN PB1-F2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 IRRVEHRNT 9
I ++EHRN+
Sbjct: 27 IPKLEHRNS 35
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 3 RVEHRNTF 10
R EH NTF
Sbjct: 525 RGEHGNTF 532
>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain
Query: 3 RVEHRNTF 10
R EH NTF
Sbjct: 525 RGEHGNTF 532
>sp|PB1F2_I83A1|PROTEIN PB1-F2|Influenza A virus (strain A/Chile/1/1983
Query: 3 RVEHRNT 9
++EHRN+
Sbjct: 29 KLEHRNS 35
>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12
Query: 5 EHRNT 9
EHRNT
Sbjct: 474 EHRNT 478
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 RVEHRNT 9
R+E RNT
Sbjct: 1842 RIESRNT 1848
>sp|VE2_HPV31|REGULATORY protein E2|Human papillomavirus 31
Query: 5 EHRNT 9
EHRNT
Sbjct: 251 EHRNT 255
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 6 HRNTF 10
HRNT+
Sbjct: 668 HRNTY 672
>sp|PB1F2_I80AA|PROTEIN PB1-F2|Influenza A virus (strain A/India/6263/1980
Query: 3 RVEHRNT 9
++EHRN+
Sbjct: 29 KLEHRNS 35
>sp|PB1F2_I77AB|PROTEIN PB1-F2|Influenza A virus (strain A/USSR/90/1977
Query: 3 RVEHRNT 9
++EHRN+
Sbjct: 29 KLEHRNS 35
>sp|PB1F2_I77AA|PROTEIN PB1-F2|Influenza A virus (strain A/Brazil/11/1978
Query: 3 RVEHRNT 9
++EHRN+
Sbjct: 29 KLEHRNS 35
>sp|YVAG_VACCC|UNCHARACTERIZED 9.3 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 RRVEHRNT 9
R + HRNT
Sbjct: 22 RLISHRNT 29
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 RVEHRNTF 10
R HR TF
Sbjct: 70 RPSHRGTF 77
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 VEHRNTF 10
V+H++TF
Sbjct: 3613 VKHKHTF 3619
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 VEHRNTF 10
V+H++TF
Sbjct: 3613 VKHKHTF 3619
>sp|VE8E2_HPV31|PROTEIN E8^E2C|Human papillomavirus 31
Query: 5 EHRNT 9
EHRNT
Sbjct: 63 EHRNT 67
>sp|PB1F2_I06A0|PROTEIN PB1-F2|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 RVEHRNT 9
++EHRN+
Sbjct: 29 KLEHRNS 35
>sp|PB1F2_I33A0|PROTEIN PB1-F2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 3 RVEHRNT 9
++EHRN+
Sbjct: 29 KLEHRNS 35
87|SequenceR|440|431|RKVLDIRRVE
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 RKVLDIR 7
RKV+DI+
Sbjct: 126 RKVIDIK 132
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RKVLDIR 7
RKV+DI+
Sbjct: 126 RKVIDIK 132
>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)
Query: 5 DIRRVE 10
D+RRVE
Sbjct: 119 DLRRVE 124
>sp|PAP_HHV11|DNA polymerase processivity factor|Human herpesvirus 1 (strain 17)
Query: 5 DIRRVE 10
D+RRVE
Sbjct: 119 DLRRVE 124
88|SequenceR|445|436|LRSYNRKVLD
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 1 LRSYNRK 7
LRS NRK
Sbjct: 156 LRSSNRK 162
>sp|VIF_HV1ET|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LRSYNRKV 8
LRSYN +V
Sbjct: 91 LRSYNTQV 98
>sp|VE2_HPV15|REGULATORY protein E2|Human papillomavirus 15
Query: 2 RSYNRK 7
R YNRK
Sbjct: 168 RRYNRK 173
>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)
Query: 1 LRSYNRKVL 9
L+ YN K+L
Sbjct: 478 LKQYNNKIL 486
89|SequenceR|450|441|KLMPILRSYN
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 MPILRSYN 10
MP++R Y+
Sbjct: 3371 MPVMRRYS 3378
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 2 LMPILRSYN 10
++P+LR YN
Sbjct: 272 IIPMLRVYN 280
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 2 LMPILRSYN 10
++P+LR YN
Sbjct: 272 IIPMLRVYN 280
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LMPILRSYN 10
++P+LR YN
Sbjct: 272 IIPMLRVYN 280
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 LMPILRSYN 10
++P+LR YN
Sbjct: 272 IIPMLRVYN 280
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 2 LMPILRSYN 10
++P+LR YN
Sbjct: 272 IIPMLRVYN 280
>sp|NSP2_ROTAD|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 1 KLMPIL 6
KLMPIL
Sbjct: 175 KLMPIL 180
>sp|NSP2_ROTHL|NON-STRUCTURAL protein 2|Rotavirus A (strain
Query: 1 KLMPIL 6
KLMPIL
Sbjct: 175 KLMPIL 180
>sp|NSP2_ROTHW|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 1 KLMPIL 6
KLMPIL
Sbjct: 175 KLMPIL 180
>sp|NSP2_ROTHP|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 1 KLMPIL 6
KLMPIL
Sbjct: 175 KLMPIL 180
>sp|NSP2_ROTHT|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 1 KLMPIL 6
KLMPIL
Sbjct: 175 KLMPIL 180
>sp|NSP2_ROTHD|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 1 KLMPIL 6
KLMPIL
Sbjct: 175 KLMPIL 180
>sp|NSP2_ROTH7|NON-STRUCTURAL protein 2|Rotavirus A (isolate RVA/Human/United
Query: 1 KLMPIL 6
KLMPIL
Sbjct: 175 KLMPIL 180
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 2 LMPILRSYN 10
L+P+LR N
Sbjct: 49 LLPLLRRQN 57
>sp|NSP2_ROTHK|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 1 KLMPIL 6
KLMPIL
Sbjct: 175 KLMPIL 180
>sp|NSP2_ROTH6|NON-STRUCTURAL protein 2|Rotavirus A (strain
Query: 1 KLMPIL 6
KLMPIL
Sbjct: 175 KLMPIL 180
>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain
Query: 4 PILRSYN 10
P+++SYN
Sbjct: 216 PLMKSYN 222
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 1 KLMPILR 7
+LMP++R
Sbjct: 610 RLMPVIR 616
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 1 KLMPILR 7
+LMP++R
Sbjct: 610 RLMPVIR 616
>sp|TEG6_VZVO|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 KLMPILRSYN 10
+L+P + +YN
Sbjct: 104 RLLPEMANYN 113
>sp|TEG6_VZVD|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 KLMPILRSYN 10
+L+P + +YN
Sbjct: 104 RLLPEMANYN 113
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 KLMPILRSYN 10
KLM ++ YN
Sbjct: 4069 KLMVVIPDYN 4078
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 KLMPILRSYN 10
KLM ++ YN
Sbjct: 4069 KLMVVIPDYN 4078
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 2 LMPILRSYN 10
L ILR YN
Sbjct: 612 LETILREYN 620
>sp|MATRX_RABVA|MATRIX protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 LMPILRSYN 10
L ILRS+N
Sbjct: 72 LRHILRSFN 80
90|SequenceR|455|446|LAVVNKLMPI
>sp|TEG7_HHV2H|TEGUMENT protein UL51|Human herpesvirus 2 (strain HG52)
Query: 1 LAVVNKLMP 9
LAVVN L+P
Sbjct: 40 LAVVNALLP 48
>sp|TEG7_HHV11|TEGUMENT protein UL51|Human herpesvirus 1 (strain 17)
Query: 1 LAVVNKLMP 9
LAVVN L+P
Sbjct: 39 LAVVNALLP 47
>sp|E434_ADE12|EARLY E4 34 kDa protein|Human adenovirus A serotype 12
Query: 3 VVNKLMP 9
VVN LMP
Sbjct: 154 VVNHLMP 160
>sp|UL107_HCMVA|UNCHARACTERIZED protein UL107|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 VVNKLMP 9
VVN+L+P
Sbjct: 70 VVNRLLP 76
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 4 VNKLMPI 10
VN+LMP+
Sbjct: 608 VNRLMPV 614
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 4 VNKLMPI 10
VN+LMP+
Sbjct: 608 VNRLMPV 614
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 LAVVNKLMPI 10
LAV N +PI
Sbjct: 246 LAVANASVPI 255
>sp|TRM2_HCMVA|TRIPARTITE terminase subunit 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 AVVNKLMPI 10
A+V+KLM I
Sbjct: 135 AIVSKLMDI 143
91|SequenceR|460|451|AVEVDLAVVN
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 AVEVDLAVVN 10
A DL+VVN
Sbjct: 5703 ATNYDLSVVN 5712
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 AVEVDLAVVN 10
A DL+VVN
Sbjct: 5680 ATNYDLSVVN 5689
92|SequenceR|465|456|YIRNTAVEVD
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 IRNTAVEV 9
IRNTAV+V
Sbjct: 702 IRNTAVKV 709
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 IRNTAVEV 9
IRNTAV+V
Sbjct: 702 IRNTAVKV 709
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 IRNTAVEV 9
IRNTAV+V
Sbjct: 702 IRNTAVKV 709
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 IRNTAVEV 9
IRNTAV+V
Sbjct: 702 IRNTAVKV 709
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 IRNTAVEV 9
IRNTAV+V
Sbjct: 702 IRNTAVKV 709
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 IRNTAVEV 9
IRNTAV+V
Sbjct: 702 IRNTAVKV 709
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 IRNTAVEV 9
IRNTAV+V
Sbjct: 702 IRNTAVKV 709
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 IRNTAVEV 9
IRNTAV+V
Sbjct: 691 IRNTAVKV 698
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 IRNTAVEV 9
IRNTAV+V
Sbjct: 692 IRNTAVKV 699
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 YIRNTAVEVD 10
Y+R T E+D
Sbjct: 269 YMRPTQAEID 278
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 1 YIRNTAV 7
Y+R+TA+
Sbjct: 453 YVRSTAI 459
>sp|ICP22_HHV11|TRANSCRIPTIONAL regulator ICP22|Human herpesvirus 1 (strain 17)
Query: 1 YIRNTAVEVD 10
++RNT EV+
Sbjct: 254 HLRNTIREVE 263
93|SequenceR|470|461|SLDCWYIRNT
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 DCWY 6
DCWY
Sbjct: 1107 DCWY 1110
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 DCWY 6
DCWY
Sbjct: 1107 DCWY 1110
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 DCWY 6
DCWY
Sbjct: 1105 DCWY 1108
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 DCWY 6
DCWY
Sbjct: 1105 DCWY 1108
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 DCWY 6
DCWY
Sbjct: 1105 DCWY 1108
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 DCWY 6
DCWY
Sbjct: 1105 DCWY 1108
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 DCWY 6
DCWY
Sbjct: 1105 DCWY 1108
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 DCWY 6
DCWY
Sbjct: 1105 DCWY 1108
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 DCWY 6
DCWY
Sbjct: 1105 DCWY 1108
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 DCWY 6
DCWY
Sbjct: 1105 DCWY 1108
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LDCWYIRN 9
LDCW + +
Sbjct: 385 LDCWILHD 392
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LDCWYIRN 9
LDCW + +
Sbjct: 385 LDCWILHD 392
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 LDCWYIRN 9
LDCW + +
Sbjct: 385 LDCWILHD 392
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 LDCWY 6
L CWY
Sbjct: 518 LSCWY 522
>sp|NS1_I02A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 2 LDC--WYIRN 9
+DC W++RN
Sbjct: 11 VDCFLWHVRN 20
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 LDCWY 6
L CWY
Sbjct: 518 LSCWY 522
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 4 CWYIRN 9
CW IRN
Sbjct: 388 CWLIRN 393
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 LDCWYIRN 9
+ CWY N
Sbjct: 520 ISCWYQTN 527
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 LDCWYIRN 9
+ CWY N
Sbjct: 520 ISCWYQTN 527
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 LDCW 5
LDCW
Sbjct: 2014 LDCW 2017
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 4 CWYIRN 9
CW +RN
Sbjct: 380 CWLVRN 385
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 2 LDCWYIRN 9
+ CWY N
Sbjct: 522 ISCWYQTN 529
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 2 LDCWYIR 8
L CW+++
Sbjct: 321 LSCWWLQ 327
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 LDCWYIR 8
L CW+++
Sbjct: 321 LSCWWLQ 327
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 DCWYIRN 9
DC Y++N
Sbjct: 1894 DCLYLKN 1900
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 DCWYIRN 9
DC Y++N
Sbjct: 1858 DCLYLKN 1864
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 DCWYIRN 9
DC Y++N
Sbjct: 1914 DCLYLKN 1920
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 DCWYIRN 9
DC Y++N
Sbjct: 1944 DCLYLKN 1950
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 LDCWYIR 8
L CW+++
Sbjct: 321 LSCWWLQ 327
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 2 LDCWYIR 8
L CW+++
Sbjct: 321 LSCWWLQ 327
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 LDCWYIR 8
L CW+++
Sbjct: 321 LSCWWLQ 327
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 DCWYIRN 9
DC Y++N
Sbjct: 1858 DCLYLKN 1864
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 5 WYIRN 9
W++RN
Sbjct: 245 WFVRN 249
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 5 WYIRN 9
W++RN
Sbjct: 245 WFVRN 249
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 LDCWYIR 8
L CW+++
Sbjct: 321 LSCWWLQ 327
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 LDCWYIR 8
L CW+++
Sbjct: 321 LSCWWLQ 327
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 5 WYIRN 9
W++RN
Sbjct: 245 WFVRN 249
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 DCWYIRN 9
DC Y++N
Sbjct: 1894 DCLYLKN 1900
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 DCWYIRN 9
DC Y++N
Sbjct: 1914 DCLYLKN 1920
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 DCWYIRN 9
DC Y++N
Sbjct: 1944 DCLYLKN 1950
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 2 LDCWYIR 8
L CW+++
Sbjct: 321 LSCWWLQ 327
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 2 LDCWYIRN 9
+ CW++++
Sbjct: 1087 ISCWFVKS 1094
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 4 CWYIRN 9
CW I+N
Sbjct: 377 CWLIKN 382
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 LDCWYIR 8
L CW+++
Sbjct: 321 LPCWWLQ 327
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 4 CWYIRN 9
CW ++N
Sbjct: 376 CWMVKN 381
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 1 SLDCWY 6
SLDC Y
Sbjct: 501 SLDCKY 506
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 1 SLDCWY 6
SLDC Y
Sbjct: 501 SLDCKY 506
94|SequenceR|475|466|YIKRYSLDCW
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 YIKRYSLD 8
+IKR+SLD
Sbjct: 867 FIKRFSLD 874
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 YIKRYSLD 8
+IKR+SLD
Sbjct: 867 FIKRFSLD 874
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 2 IKRYSLDCW 10
+KRY L+ W
Sbjct: 424 LKRYDLELW 432
>sp|VP1_POVJC|MAJOR capsid protein VP1|JC polyomavirus (JCPyV) (JCV)
Query: 3 KRYSLDCW 10
K Y ++CW
Sbjct: 194 KAYPVECW 201
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 1 YIKRYSLD 8
+IK++SLD
Sbjct: 867 FIKKFSLD 874
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 1 YIKRYSLD 8
+IK++SLD
Sbjct: 867 FIKKFSLD 874
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 YIKRYSLD 8
+IK++SLD
Sbjct: 867 FIKKFSLD 874
>sp|VP1_POVKI|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 350)
Query: 3 KRYSLDCW 10
+RYS++ W
Sbjct: 212 ERYSVESW 219
>sp|VP1_POVK6|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 60)
Query: 3 KRYSLDCW 10
+RYS++ W
Sbjct: 212 ERYSVESW 219
>sp|VP1_POVK3|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 380)
Query: 3 KRYSLDCW 10
+RYS++ W
Sbjct: 212 ERYSVESW 219
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 YIKRYSLDC 9
Y+KRY C
Sbjct: 1969 YVKRYERGC 1977
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 YIKRYSLDC 9
Y+KRY C
Sbjct: 1969 YVKRYERGC 1977
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YIKRYSLDC 9
+I RY+ DC
Sbjct: 117 FIPRYNSDC 125
>sp|VE2_HPV10|REGULATORY protein E2|Human papillomavirus type 10
Query: 1 YIKRYSLDCW 10
Y++ YS D W
Sbjct: 138 YVQNYSDDRW 147
>sp|VPK2_VACCP|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 YIKRYSLDC 9
YIK Y L C
Sbjct: 258 YIKIYELPC 266
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 YIKRYSLDCW 10
YI+R + D W
Sbjct: 1094 YIERQANDGW 1103
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 YIKRYSLDCW 10
YI+R + D W
Sbjct: 1095 YIERQANDGW 1104
>sp|VPK2_VACCT|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Tian Tan)
Query: 1 YIKRYSLDC 9
YIK Y L C
Sbjct: 291 YIKIYELPC 299
>sp|VPK2_VACCC|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YIKRYSLDC 9
YIK Y L C
Sbjct: 291 YIKIYELPC 299
>sp|VPK2_VACCA|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Ankara) (VACV)
Query: 1 YIKRYSLDC 9
YIK Y L C
Sbjct: 291 YIKIYELPC 299
>sp|VPK2_MONPV|SERINE/THREONINE-PROTEIN kinase 2|Monkeypox virus (MPXV)
Query: 1 YIKRYSLDC 9
YIK Y L C
Sbjct: 291 YIKIYELPC 299
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 2 IKRYSLDCW 10
+K+YS D W
Sbjct: 489 MKKYSPDEW 497
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 YIKRYSLDCW 10
Y+K + CW
Sbjct: 836 YMKPKHIRCW 845
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 2 IKRYSLDCW 10
+K+YS D W
Sbjct: 489 MKKYSPDEW 497
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 YSLDC 9
YS+DC
Sbjct: 142 YSMDC 146
>sp|VP1_POVWU|MAJOR capsid protein VP1|WU polyomavirus (WUPyV)
Query: 3 KRYSLDCW 10
++YS++ W
Sbjct: 204 EKYSIESW 211
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 YSLDC 9
YS+DC
Sbjct: 142 YSMDC 146
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 2 IKRYSLDCW 10
+K+YS D W
Sbjct: 491 MKKYSPDEW 499
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 YIKRYSLDCW 10
Y+K + CW
Sbjct: 842 YMKPKHVRCW 851
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 5 YSLDC 9
YS+DC
Sbjct: 953 YSVDC 957
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 5 YSLDC 9
YS+DC
Sbjct: 953 YSVDC 957
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 5 YSLDC 9
YS+DC
Sbjct: 953 YSVDC 957
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 2 IKRYSLDCW 10
+KRY + W
Sbjct: 420 LKRYDEEMW 428
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 KRYSLDC 9
++YS DC
Sbjct: 1796 QKYSSDC 1802
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 YIKRYSLDCW 10
Y++ +CW
Sbjct: 2050 YLRGSKANCW 2059
95|SequenceR|480|471|DMYASYIKRY
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 3 YASYIKRY 10
YA+Y+K +
Sbjct: 477 YANYVKTF 484
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 1 DMYASY 6
DMYA+Y
Sbjct: 444 DMYANY 449
>sp|PG081_VARV|PROTEIN OPG081|Variola virus
Query: 2 MYASYIK 8
+YA+YIK
Sbjct: 67 LYATYIK 73
>sp|PG081_VAR67|PROTEIN OPG081|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 MYASYIK 8
+YA+YIK
Sbjct: 67 LYATYIK 73
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 3 YASYIKRY 10
YA Y+K +
Sbjct: 477 YAGYVKTF 484
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 DMYASYIK 8
D YAS+++
Sbjct: 597 DSYASFVR 604
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 DMYASYIK 8
D+Y YIK
Sbjct: 2152 DIYQRYIK 2159
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 DMYASYIK 8
D YAS+++
Sbjct: 597 DSYASFVR 604
96|SequenceR|485|476|PDSAKDMYAS
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 1 PDSAKDMYA 9
PD+ K M+A
Sbjct: 434 PDTGKSMFA 442
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 PDSAKDM 7
PD+ KDM
Sbjct: 152 PDALKDM 158
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 PDSAKDM 7
PD+ KDM
Sbjct: 152 PDALKDM 158
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 PDSAKDM 7
PD+ KDM
Sbjct: 150 PDALKDM 156
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 PDSAKDM 7
PD+ KDM
Sbjct: 152 PDALKDM 158
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 1 PDSAKDMYA 9
PD K M+A
Sbjct: 439 PDCGKSMFA 447
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 PDSAKDM 7
PD+ KDM
Sbjct: 152 PDALKDM 158
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 PDSAKDM 7
PD+ KDM
Sbjct: 152 PDALKDM 158
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 PDSAKDM 7
PD+ KDM
Sbjct: 152 PDALKDM 158
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 PDSAKDM 7
PD+ KDM
Sbjct: 152 PDALKDM 158
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 PDSAKDM 7
PD+ KDM
Sbjct: 152 PDALKDM 158
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 PDSAKDM 7
PD+ KDM
Sbjct: 152 PDALKDM 158
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 5 KDMYAS 10
KDMY S
Sbjct: 522 KDMYVS 527
>sp|VB18_VARV|ANKYRIN repeat protein B18|Variola virus
Query: 5 KDMYAS 10
KDMY S
Sbjct: 522 KDMYVS 527
>sp|VB18_VAR67|ANKYRIN repeat protein B18|Variola virus (isolate Human/India/Ind3/1967)
Query: 5 KDMYAS 10
KDMY S
Sbjct: 522 KDMYVS 527
>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 KDMYAS 10
KDMY S
Sbjct: 522 KDMYVS 527
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PDSAKDMYAS 10
PDS + Y+S
Sbjct: 2378 PDSDAESYSS 2387
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 PDSAKDMYAS 10
PDS + Y+S
Sbjct: 2378 PDSDAESYSS 2387
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 PDSAKDM 7
PD KDM
Sbjct: 152 PDCLKDM 158
97|SequenceR|490|481|VEQEKPDSAK
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 VEQEKPD 7
V +EKPD
Sbjct: 1892 VREEKPD 1898
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 VEQEKPD 7
V +EKPD
Sbjct: 1892 VREEKPD 1898
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 VEQEKPD 7
V +EKPD
Sbjct: 1894 VREEKPD 1900
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 VEQEKPD 7
V +EKPD
Sbjct: 1894 VREEKPD 1900
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 VEQEKPD 7
V +EKPD
Sbjct: 1893 VHEEKPD 1899
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 2 EQEKPDSAK 10
E+EKPD K
Sbjct: 429 EKEKPDPYK 437
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 2 EQEKPDSAK 10
E+EKPD K
Sbjct: 429 EKEKPDPYK 437
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 VEQEKPD 7
++Q+KPD
Sbjct: 1886 IKQKKPD 1892
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 VEQEKPD 7
++Q+KPD
Sbjct: 1886 IKQKKPD 1892
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 VEQEKPD 7
++Q+KPD
Sbjct: 1886 IKQKKPD 1892
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 VEQEKPD 7
++Q+KPD
Sbjct: 1886 IKQKKPD 1892
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 VEQEKPD 7
++Q+KPD
Sbjct: 1886 IKQKKPD 1892
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 VEQEKPD 7
++Q+KPD
Sbjct: 1886 IKQKKPD 1892
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 VEQEKPD 7
++Q+KPD
Sbjct: 1886 IKQKKPD 1892
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 2 EQEKPDSA 9
E+E PD A
Sbjct: 240 ERENPDRA 247
98|SequenceR|495|486|QEDILVEQEK
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 QEDILVEQE 9
++DI VE+E
Sbjct: 2660 EQDIRVEEE 2668
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 QEDILVEQE 9
++DI VE+E
Sbjct: 2647 EKDIRVEEE 2655
99|SequenceR|500|491|EPSHLQEDIL
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 4 HLQEDIL 10
HLQEDI+
Sbjct: 83 HLQEDII 89
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 4 HLQEDIL 10
HLQEDI+
Sbjct: 83 HLQEDII 89
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 4 HLQEDIL 10
HLQEDI+
Sbjct: 83 HLQEDII 89
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 4 HLQEDIL 10
HLQEDI+
Sbjct: 83 HLQEDII 89
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 4 HLQEDIL 10
HLQEDI+
Sbjct: 83 HLQEDII 89
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 HLQEDIL 10
HLQEDI+
Sbjct: 85 HLQEDII 91
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 4 HLQEDIL 10
HLQEDI+
Sbjct: 85 HLQEDII 91
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 HLQEDIL 10
HLQEDI+
Sbjct: 85 HLQEDII 91
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 HLQEDIL 10
HLQEDI+
Sbjct: 85 HLQEDII 91
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 4 HLQEDIL 10
HLQEDI+
Sbjct: 83 HLQEDII 89
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 HLQEDIL 10
HLQEDI+
Sbjct: 85 HLQEDII 91
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 4 HLQEDIL 10
HLQEDI+
Sbjct: 83 HLQEDII 89
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 4 HLQEDIL 10
HLQEDI+
Sbjct: 83 HLQEDII 89
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 HLQEDIL 10
HLQEDI+
Sbjct: 83 HLQEDII 89
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 4 HLQEDIL 10
HLQEDI+
Sbjct: 83 HLQEDII 89
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 PSHLQEDI 9
PSH Q+D+
Sbjct: 210 PSHAQKDL 217
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 HLQEDIL 10
HLQEDI+
Sbjct: 83 HLQEDIV 89
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 4 HLQEDIL 10
HLQEDI+
Sbjct: 83 HLQEDIV 89
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 HLQEDIL 10
HLQEDI+
Sbjct: 83 HLQEDIV 89
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 4 HLQEDIL 10
HLQEDI+
Sbjct: 83 HLQEDIV 89
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 HLQEDIL 10
HLQEDI+
Sbjct: 83 HLQEDIV 89
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 4 HLQEDIL 10
HLQEDI+
Sbjct: 83 HLQEDIV 89
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 4 HLQEDIL 10
HLQEDI+
Sbjct: 83 HLQEDIV 89
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 2 PSHLQEDI 9
PSH Q D+
Sbjct: 210 PSHAQRDL 217
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 PSHLQEDI 9
PSH Q D+
Sbjct: 210 PSHAQRDL 217
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 EPSHLQEDIL 10
+PS +QE +L
Sbjct: 2102 KPSQMQEHVL 2111
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 EPSHLQEDIL 10
+PS +QE +L
Sbjct: 2102 KPSQMQEHVL 2111
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 EPSHLQEDIL 10
+PS +QE +L
Sbjct: 2098 KPSQMQEHVL 2107
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 PSHLQEDIL 10
P+H Q+D++
Sbjct: 208 PTHAQKDMV 216
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 EPSHLQE 7
+PSH QE
Sbjct: 622 DPSHSQE 628
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 SHLQEDIL 10
S+L+ED+L
Sbjct: 3743 SNLEEDVL 3750
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 SHLQEDIL 10
S+L+ED+L
Sbjct: 3763 SNLEEDVL 3770
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 SHLQEDIL 10
S+L+ED+L
Sbjct: 3793 SNLEEDVL 3800
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 SHLQEDIL 10
S+L+ED+L
Sbjct: 3743 SNLEEDVL 3750
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 SHLQEDIL 10
S+L+ED+L
Sbjct: 3763 SNLEEDVL 3770
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 SHLQEDIL 10
S+L+ED+L
Sbjct: 3793 SNLEEDVL 3800
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 4 HLQEDIL 10
HL+EDI+
Sbjct: 83 HLKEDII 89
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 4 HLQEDIL 10
HL EDI+
Sbjct: 85 HLHEDII 91
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 4 HLQEDIL 10
HL EDI+
Sbjct: 85 HLHEDII 91
>sp|NS1_I97A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 PSHLQEDI 9
P H +ED+
Sbjct: 167 PGHTEEDV 174
>sp|NS1_I97A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 2 PSHLQEDI 9
P H +ED+
Sbjct: 167 PGHTEEDV 174
>sp|NS1_I96A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHFTEDV 174
>sp|UL58_HCMVA|UNCHARACTERIZED protein UL58|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EPSHLQEDI 9
+P H+ ED+
Sbjct: 79 DPRHVLEDL 87
>sp|NS1_I07A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHTNEDV 174
>sp|NS1_I96A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHTNEDV 174
>sp|NS1_I96A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHTNEDV 174
>sp|NS1_I45A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHTNEDV 174
>sp|NS1_I00A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/New
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHTNEDV 174
>sp|NS1_I40A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hickox/1940
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHTNEDV 174
>sp|NS1_I57A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Japan/305/1957
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHTNEDV 174
>sp|NS1_I47A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Fort
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHTNEDV 174
>sp|NS1_I80AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/India/6263/1980
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHTNEDV 174
>sp|NS1_I77AB|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USSR/90/1977
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHTNEDV 174
>sp|NS1_I77AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brazil/11/1978
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHTNEDV 174
>sp|NS1_I83A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chile/1/1983
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHTNEDV 174
>sp|NS1_I54A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHTNEDV 174
>sp|NS1_I51A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHTNEDV 174
>sp|NS1_I43A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 161 PGHTNEDV 168
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 1 EPSHLQE 7
+P HLQE
Sbjct: 266 KPPHLQE 272
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 4 HLQEDI 9
HL EDI
Sbjct: 85 HLHEDI 90
>sp|NS1_I50A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Fort
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHTNEDV 174
>sp|NS1_I57A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Singapore/1/1957
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHTNEDV 174
>sp|NS1_I60A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Ann
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHTNEDV 174
>sp|NS1_I57A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHTNEDV 174
>sp|NS1_I57A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHTNEDV 174
>sp|NS1_I57A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHTNEDV 174
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SHLQEDIL 10
+HL E+IL
Sbjct: 289 AHLHEEIL 296
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 SHLQEDIL 10
+HL E+IL
Sbjct: 289 AHLHEEIL 296
>sp|NS1_I61A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHTDEDV 174
>sp|NS1_I56A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 2 PSHLQEDI 9
P H ED+
Sbjct: 167 PGHTNEDV 174
100|SequenceR|505|496|DVALGEPSHL
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 3 ALGEPSHL 10
+LG+PSH+
Sbjct: 77 SLGKPSHI 84
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 ALGEPSHL 10
+LG+PSH+
Sbjct: 77 SLGKPSHI 84
>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 75 DVALGRP 81
>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 76 DVALGRP 82
>sp|HEMA_INBF2|HEMAGGLUTININ B virus (strain B/Finland/56/1988)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 64 DVALGRP 70
>sp|HEMA_INBGL|HEMAGGLUTININ B virus (strain B/GL/1954)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 75 DVALGRP 81
>sp|HEMA_INBFU|HEMAGGLUTININ B virus (strain B/Fukuoka/80/1981)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 64 DVALGRP 70
>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 64 DVALGRP 70
>sp|HEMA_INBF9|HEMAGGLUTININ B virus (strain B/Finland/151/1990)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 64 DVALGRP 70
>sp|HEMA_INBF8|HEMAGGLUTININ B virus (strain B/Finland/150/1990)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 64 DVALGRP 70
>sp|HEMA_INBF7|HEMAGGLUTININ B virus (strain B/Finland/149/1990)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 64 DVALGRP 70
>sp|HEMA_INBF6|HEMAGGLUTININ B virus (strain B/Finland/148/1990)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 64 DVALGRP 70
>sp|HEMA_INBF5|HEMAGGLUTININ B virus (strain B/Finland/147/1990)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 64 DVALGRP 70
>sp|HEMA_INBF4|HEMAGGLUTININ B virus (strain B/Finland/146/1990)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 64 DVALGRP 70
>sp|HEMA_INBF3|HEMAGGLUTININ B virus (strain B/Finland/145/1990)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 64 DVALGRP 70
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 79 DVALGRP 85
>sp|HEMA_INBNA|HEMAGGLUTININ B virus (strain B/Nagasaki/1/1987)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 64 DVALGRP 70
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 79 DVALGRP 85
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 69 DVALGRP 75
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 79 DVALGRP 85
>sp|HEMA_INBF1|HEMAGGLUTININ B virus (strain B/Finland/24/1985)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 64 DVALGRP 70
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 72 DVALGRP 78
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 72 DVALGRP 78
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 79 DVALGRP 85
>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann
Query: 1 DVALGEP 7
DVALG P
Sbjct: 71 DVALGRP 77
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 DVALGEP 7
DVALG P
Sbjct: 72 DVALGRP 78
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 72 DVALGRP 78
>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)
Query: 1 DVALGEP 7
DVALG P
Sbjct: 64 DVALGRP 70
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 ALGEPSHL 10
+LG+P+H+
Sbjct: 77 SLGKPAHI 84
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 3 ALGEPSHL 10
+LG+P+H+
Sbjct: 77 SLGKPAHI 84
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 3 ALGEPSHL 10
+LG+P+H+
Sbjct: 77 SLGKPAHI 84
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 3 ALGEPSHL 10
+LG+P+H+
Sbjct: 77 SLGKPAHI 84
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 VALGEPSHL 10
VALG PS +
Sbjct: 527 VALGRPSPM 535
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 VALGEPSHL 10
VALG PS +
Sbjct: 527 VALGRPSPM 535
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 VALGEPSHL 10
VALG PS +
Sbjct: 527 VALGRPSPM 535
>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)
Query: 1 DVALGEPSHL 10
DV+LG+ HL
Sbjct: 417 DVSLGDELHL 426
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 5 GEPSHL 10
G PSHL
Sbjct: 1750 GMPSHL 1755
>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)
Query: 1 DVALGEPSHL 10
DV+LG+ HL
Sbjct: 417 DVSLGDELHL 426
>sp|PG115_VACCT|CORE protein OPG115|Vaccinia virus (strain Tian Tan)
Query: 3 ALGEPSHL 10
+LG+ SHL
Sbjct: 132 SLGDDSHL 139
>sp|PG115_VACCC|CORE protein OPG115|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 ALGEPSHL 10
+LG+ SHL
Sbjct: 132 SLGDDSHL 139
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 1 DVALGEP 7
DVA G P
Sbjct: 72 DVAFGRP 78
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 4 LGEPSH 9
+G+PSH
Sbjct: 585 VGQPSH 590
101|SequenceR|510|501|HKHVWDVALG
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 HKHVWDVALG 10
HKH+W+ G
Sbjct: 1768 HKHMWNFVSG 1777
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 HKHVWDVALG 10
HKH+W+ G
Sbjct: 1768 HKHMWNFVSG 1777
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 HKHVWDVAL 9
HK WD+ +
Sbjct: 316 HKMAWDMMM 324
Query: 2 KHVWDVALG 10
KH+W+ G
Sbjct: 1767 KHMWNFVSG 1775
>sp|MATRX_VSNJO|MATRIX protein|Vesicular stomatitis New Jersey virus
Query: 3 HVWD 6
HVWD
Sbjct: 188 HVWD 191
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 4 VWDVALG 10
VWD+A G
Sbjct: 1349 VWDMAAG 1355
>sp|U150A_HCMVM|UNCHARACTERIZED protein UL150A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 VWDVAL 9
+WDVAL
Sbjct: 153 LWDVAL 158
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 HKHVWDVALG 10
KH+W+ G
Sbjct: 1760 QKHLWNFVSG 1769
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 HKHVWDVALG 10
+KH+W+ G
Sbjct: 1766 YKHMWNFISG 1775
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 HKHVWDVALG 10
KH+W+ G
Sbjct: 1764 QKHLWNFVSG 1773
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KHVWD 6
KH WD
Sbjct: 210 KHYWD 214
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 4 VWDVA 8
+WDVA
Sbjct: 159 IWDVA 163
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 4 VWDVA 8
+WDVA
Sbjct: 159 IWDVA 163
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HKHVWD 6
++H WD
Sbjct: 381 YRHTWD 386
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HKHVWD 6
++H WD
Sbjct: 381 YRHTWD 386
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KHVWD 6
KH WD
Sbjct: 215 KHYWD 219
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KHVWD 6
KH WD
Sbjct: 215 KHYWD 219
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KHVWD 6
KH WD
Sbjct: 216 KHYWD 220
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KHVWD 6
KH WD
Sbjct: 215 KHYWD 219
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KHVWD 6
KH WD
Sbjct: 207 KHYWD 211
>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)
Query: 2 KHVW 5
KHVW
Sbjct: 431 KHVW 434
>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)
Query: 2 KHVW 5
KHVW
Sbjct: 430 KHVW 433
>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 KHVW 5
KHVW
Sbjct: 430 KHVW 433
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 HKHVWD 6
++H WD
Sbjct: 371 YRHTWD 376
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KHVWD 6
KH WD
Sbjct: 205 KHYWD 209
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 KHVWDVALG 10
KH+W+ G
Sbjct: 1764 KHMWNFVSG 1772
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 KHVWDVALG 10
KH+W+ G
Sbjct: 1768 KHMWNFVSG 1776
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KHVWD 6
KH WD
Sbjct: 216 KHYWD 220
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 KHVWDVALG 10
KH+W+ G
Sbjct: 1764 KHMWNFVSG 1772
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 KHVWDVALG 10
KH+W+ G
Sbjct: 1768 KHMWNFVSG 1776
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KHVWD 6
KH WD
Sbjct: 210 KHYWD 214
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KHVWD 6
KH WD
Sbjct: 207 KHYWD 211
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KHVWD 6
KH WD
Sbjct: 206 KHYWD 210
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KHVWD 6
KH WD
Sbjct: 208 KHYWD 212
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 KHVWDVALG 10
KH+W+ G
Sbjct: 1763 KHMWNFVSG 1771
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 KHVWDVALG 10
KH+W+ G
Sbjct: 1768 KHMWNFVSG 1776
>sp|MC132_MCV1|PROTEIN MC132|Molluscum contagiosum virus subtype 1
Query: 1 HKHVWD 6
H H+W+
Sbjct: 131 HSHLWE 136
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 KHVWDVALG 10
KH+W+ G
Sbjct: 1763 KHMWNFVSG 1771
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KHVWD 6
KH WD
Sbjct: 216 KHYWD 220
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 HKHVWDV 7
H++V+DV
Sbjct: 665 HEYVYDV 671
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 HKHVWDV 7
H++V+DV
Sbjct: 665 HEYVYDV 671
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 HKHVWDV 7
H++V+DV
Sbjct: 665 HEYVYDV 671
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 HKHVWDV 7
H++V+DV
Sbjct: 665 HEYVYDV 671
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 HKHVWDV 7
H++V+DV
Sbjct: 665 HEYVYDV 671
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 1 HKHVWD 6
HK +W+
Sbjct: 406 HKDIWE 411
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 HKHVWD 6
HK +W+
Sbjct: 406 HKDIWE 411
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 KHVWDVALG 10
KH+W+ G
Sbjct: 1763 KHMWNFISG 1771
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 KHVWDVALG 10
KH+W+ G
Sbjct: 1763 KHMWNFISG 1771
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 KHVWDVALG 10
KH+W+ G
Sbjct: 1763 KHMWNFISG 1771
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 KHVWDVALG 10
KH+W+ G
Sbjct: 1763 KHMWNFISG 1771
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 KHVWDVALG 10
KH+W+ G
Sbjct: 1763 KHMWNFISG 1771
>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12
Query: 1 HKHVWDVAL 9
H+H WD L
Sbjct: 13 HQHKWDKLL 21
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 KHVWDVALG 10
KH+W+ G
Sbjct: 1767 KHMWNFISG 1775
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 KHVWDVALG 10
KH+W+ G
Sbjct: 1767 KHMWNFISG 1775
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 KHVWDVALG 10
KH+W+ G
Sbjct: 1767 KHMWNFISG 1775
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 KHVWDVALG 10
KH+W+ G
Sbjct: 1763 KHMWNFISG 1771
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 KHVWDVALG 10
KH+W+ G
Sbjct: 1767 KHMWNFISG 1775
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 KHVWDVALG 10
KH+W+ G
Sbjct: 1763 KHMWNFISG 1771
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 KHVWDVALG 10
KH+W+ G
Sbjct: 1763 KHMWNFISG 1771
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 KHVWDVALG 10
KH+W+ G
Sbjct: 1763 KHMWNFISG 1771
102|SequenceR|515|506|DTWYIHKHVW
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 WYIHKH 8
WY++KH
Sbjct: 1479 WYVYKH 1484
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 WYIHKH 8
WY++KH
Sbjct: 1479 WYVYKH 1484
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 TWYIHKHV 9
TW++HK V
Sbjct: 1222 TWHMHKLV 1229
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 1 DTWYIHKH 8
D WY +KH
Sbjct: 368 DGWYGYKH 375
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 1 DTWYIHKH 8
D WY +KH
Sbjct: 368 DGWYGYKH 375
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 DTWYIHKHV 9
+ W+IHK V
Sbjct: 1876 NVWFIHKGV 1884
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 DTWYIHKHV 9
+ WY++K V
Sbjct: 862 ENWYVYKDV 870
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 DTWYIHKHV 9
+ W+IHK +
Sbjct: 1876 NVWFIHKGI 1884
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 DTWYIHKHV 9
+ WY++K V
Sbjct: 862 ENWYVYKDV 870
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 WYIHKHVW 10
WYI VW
Sbjct: 254 WYILTEVW 261
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 WYIHKHVW 10
WYI VW
Sbjct: 254 WYILTEVW 261
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 WYIHKHVW 10
WYI VW
Sbjct: 254 WYILTEVW 261
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TWYIHKH 8
TW IH H
Sbjct: 3282 TWSIHAH 3288
Query: 2 TWYIHKH 8
TW +HK
Sbjct: 484 TWLVHKQ 490
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TWYIHKH 8
TW IH H
Sbjct: 3282 TWSIHAH 3288
Query: 2 TWYIHKH 8
TW +HK
Sbjct: 484 TWLVHKQ 490
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TWYIHKH 8
TW IH H
Sbjct: 3282 TWSIHAH 3288
Query: 2 TWYIHKH 8
TW +HK
Sbjct: 484 TWLVHKQ 490
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TWYIHKH 8
TW IH H
Sbjct: 3282 TWSIHAH 3288
Query: 2 TWYIHKH 8
TW +HK
Sbjct: 484 TWLVHKQ 490
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TWYIHKH 8
TW IH H
Sbjct: 3282 TWSIHAH 3288
Query: 2 TWYIHKH 8
TW +HK
Sbjct: 484 TWLVHKQ 490
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 1 DTWYIHKH 8
D WY ++H
Sbjct: 368 DGWYGYRH 375
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 TWYIHKH 8
TW IH H
Sbjct: 3286 TWSIHAH 3292
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 TWYIHKH 8
TW IH H
Sbjct: 3284 TWSIHAH 3290
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 TWYIHKH 8
TW IH H
Sbjct: 3284 TWSIHAH 3290
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 TWYIHKH 8
TW IH H
Sbjct: 3284 TWSIHAH 3290
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 TWYIHKH 8
TW IH H
Sbjct: 3284 TWSIHAH 3290
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 TWYIHKH 8
TW IH H
Sbjct: 3285 TWSIHAH 3291
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 TWYIHKH 8
TW IH H
Sbjct: 3284 TWSIHAH 3290
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 TWYIHKH 8
TW IH H
Sbjct: 3286 TWSIHAH 3292
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 1 DTWYIHKH 8
D WY ++H
Sbjct: 368 DGWYGYRH 375
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 1 DTWYIHKH 8
D WY ++H
Sbjct: 368 DGWYGYRH 375
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 1 DTWYIHKH 8
D WY ++H
Sbjct: 368 DGWYGYRH 375
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 1 DTWYIHKH 8
D WY ++H
Sbjct: 368 DGWYGYRH 375
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 1 DTWYIHKH 8
D WY ++H
Sbjct: 368 DGWYGYRH 375
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 1 DTWYIHKH 8
D WY ++H
Sbjct: 368 DGWYGYRH 375
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 1 DTWYIHKH 8
D WY ++H
Sbjct: 368 DGWYGYRH 375
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 WYIHKH 8
W+++KH
Sbjct: 1479 WFVYKH 1484
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 WYIHKH 8
W+++KH
Sbjct: 1479 WFVYKH 1484
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 WYIHKH 8
W+++KH
Sbjct: 1479 WFVYKH 1484
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 WYIHKH 8
W+++KH
Sbjct: 1313 WFVYKH 1318
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 WYIHKH 8
W+++KH
Sbjct: 1477 WFVYKH 1482
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 WYIHKH 8
W+++KH
Sbjct: 1479 WFVYKH 1484
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 WYIHKH 8
W+++KH
Sbjct: 1479 WFVYKH 1484
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 5 IHKHVW 10
IHK +W
Sbjct: 405 IHKDIW 410
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 IHKHVW 10
IHK +W
Sbjct: 405 IHKDIW 410
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 WYIHKHV 9
W++HK V
Sbjct: 1219 WHLHKAV 1225
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 3 WYIHKHV 9
W++HK V
Sbjct: 1233 WHLHKTV 1239
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 3 WYIHKHV 9
W++HK V
Sbjct: 1236 WHMHKMV 1242
Query: 2 TWYIHK 7
TW+ HK
Sbjct: 1868 TWFPHK 1873
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 3 WYIHKHV 9
W++HK V
Sbjct: 1233 WHMHKMV 1239
Query: 2 TWYIHK 7
TW+ HK
Sbjct: 1867 TWFPHK 1872
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 1 DTWYIH 6
D W++H
Sbjct: 28 DPWFLH 33
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 DTWYIHK 7
D W +HK
Sbjct: 472 DAWLVHK 478
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 2 TWYIHKHV 9
TW +++H+
Sbjct: 51 TWQLNQHI 58
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 TWYIH 6
TW++H
Sbjct: 172 TWFVH 176
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 TWYIH 6
TW++H
Sbjct: 172 TWFVH 176
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 TWYIH 6
TW++H
Sbjct: 172 TWFVH 176
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 TWYIH 6
TW++H
Sbjct: 172 TWFVH 176
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 3 WYIHKHV 9
W++HK V
Sbjct: 1230 WHLHKVV 1236
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 WYIHKHV 9
W++HK V
Sbjct: 1229 WHLHKVV 1235
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 3 WYIHKHV 9
W++HK V
Sbjct: 1229 WHLHKVV 1235
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 WYIHKH 8
W++++H
Sbjct: 1479 WFVYRH 1484
>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43
Query: 3 WYIHKHVW 10
+Y+H +W
Sbjct: 436 FYLHPSLW 443
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 DTWYIHKHVW 10
D W + VW
Sbjct: 373 DQWVLRPRVW 382
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 4 YIHKH 8
Y+HKH
Sbjct: 1296 YMHKH 1300
Query: 1 DTWYIHKHV 9
+ W+ HK +
Sbjct: 1876 NVWFTHKGI 1884
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 DTWYIHKHVW 10
D W + VW
Sbjct: 373 DQWVLRPRVW 382
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 DTWYIHKHVW 10
D W + VW
Sbjct: 373 DQWVLRPRVW 382
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 TWYIHKHVW 10
TW H+W
Sbjct: 760 TWESLDHLW 768
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 TWYIHKHVW 10
TW H+W
Sbjct: 760 TWESLDHLW 768
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 TWYIHKHVW 10
TW H+W
Sbjct: 760 TWESLDHLW 768
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 TWYIHKHVW 10
TW H+W
Sbjct: 759 TWESLDHLW 767
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 TWYIHKHVW 10
TW H+W
Sbjct: 760 TWESLDHLW 768
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 3 WYIHKHV 9
WY KH+
Sbjct: 637 WYNIKHI 643
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 TWYIHKH 8
+W +HK
Sbjct: 485 SWLVHKQ 491
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 TWYIHKH 8
+W +HK
Sbjct: 485 SWLVHKQ 491
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 TWYIHKHVW 10
T YI K VW
Sbjct: 1858 TEYIGKTVW 1866
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 DTWYIH 6
D WY++
Sbjct: 2686 DKWYVN 2691
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 DTWYIH 6
D WY++
Sbjct: 2686 DKWYVN 2691
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 TWYIHKHVW 10
TW H+W
Sbjct: 759 TWESLDHLW 767
>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)
Query: 3 WYIHKHV 9
W + KH+
Sbjct: 182 WIMEKHI 188
>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)
Query: 3 WYIHKHV 9
W + KH+
Sbjct: 182 WIMEKHI 188
>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann
Query: 3 WYIHKHV 9
W + KH+
Sbjct: 182 WIMEKHI 188
103|SequenceR|520|511|TKNGSDTWYI
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 TKNGSDTWYI 10
TKNG TW I
Sbjct: 1335 TKNGKRTWPI 1344
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 TKNGSDTWY 9
T N D+WY
Sbjct: 858 TSNFDDSWY 866
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 GSDTWY 9
G D+WY
Sbjct: 665 GEDSWY 670
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 GSDTWY 9
G D+WY
Sbjct: 664 GEDSWY 669
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 2 KNGSDTWYI 10
KN S+TW I
Sbjct: 613 KNKSETWPI 621
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 TKNGSDTWYI 10
T N SD++Y+
Sbjct: 180 TPNASDSYYL 189
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 KNGSDTWY 9
++G+D WY
Sbjct: 1103 RSGTDCWY 1110
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 KNGSDTWY 9
++G+D WY
Sbjct: 1103 RSGTDCWY 1110
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 KNGSDTWY 9
++G+D WY
Sbjct: 1101 RSGTDCWY 1108
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 KNGSDTWY 9
+ G+D WY
Sbjct: 1101 RTGTDCWY 1108
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 NGSDTW 8
NG+D W
Sbjct: 1236 NGTDAW 1241
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 NGSDTW 8
NG+D W
Sbjct: 1236 NGTDAW 1241
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 NGSDTW 8
NG+D W
Sbjct: 1236 NGTDAW 1241
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 KNGSDTWY 9
+ G+D WY
Sbjct: 1101 RTGTDCWY 1108
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 KNGSDTWY 9
+ G+D WY
Sbjct: 1101 RTGTDCWY 1108
Query: 5 SDTWYI 10
SDTW++
Sbjct: 2801 SDTWHV 2806
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 KNGSDTWY 9
+ G+D WY
Sbjct: 1101 RTGTDCWY 1108
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 KNGSDTWY 9
+ G+D WY
Sbjct: 1101 RTGTDCWY 1108
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 KNGSDTWY 9
+ G+D WY
Sbjct: 1101 RTGTDCWY 1108
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 TKNGSDTWYI 10
T N ++ WY+
Sbjct: 857 TSNFNENWYV 866
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 KNGSDTWY 9
+ G+D WY
Sbjct: 1101 RTGTDCWY 1108
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 TKNGSDTWYI 10
T N ++ WY+
Sbjct: 857 TSNFNENWYV 866
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENNSETWPI 621
>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)
Query: 5 SDTWY 9
SD+WY
Sbjct: 206 SDSWY 210
>sp|PA_I01A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 136 ENKSETWPI 144
>sp|PA_I01A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 136 ENKSETWPI 144
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 606 ENKSETWPI 614
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 1 TKNGSDTWYI 10
+K+G D W I
Sbjct: 9 SKDGLDDWCI 18
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 609 ENKSETWPI 617
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 606 ENKSETWPI 614
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 1 TKNGSDTWYI 10
+K+G D W I
Sbjct: 9 SKDGLDDWCI 18
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENKSETWPI 621
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 TKNGSDTWY 9
+K DTWY
Sbjct: 174 SKQYKDTWY 182
>sp|VE2_HPV1|REGULATORY protein E2|Human papillomavirus type 1 (Human
Query: 2 KNGSDTW 8
+NG D W
Sbjct: 140 QNGDDVW 146
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 KNGSDTW 8
+NG D W
Sbjct: 527 RNGVDHW 533
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENRSETWPI 621
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 NGSDTW 8
NGS W
Sbjct: 376 NGSSAW 381
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 1 TKNGSDTWYI 10
T+NG+ ++Y+
Sbjct: 359 TRNGTRSFYV 368
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENRSETWPI 621
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENRSETWPI 621
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENRSETWPI 621
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENRSETWPI 621
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENRSETWPI 621
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENRSETWPI 621
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 2 KNGSDTWYI 10
+N S+TW I
Sbjct: 613 ENRSETWPI 621
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GSDTWYI 10
G+DT+Y+
Sbjct: 1018 GADTFYV 1024
>sp|PG030_VARV|PROTEIN OPG030|Variola virus
Query: 4 GSDTWY 9
G D WY
Sbjct: 77 GKDNWY 82
>sp|PG030_VAR67|PROTEIN OPG030|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 GSDTWY 9
G D WY
Sbjct: 77 GKDNWY 82
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 KNGSDTW 8
+N S+TW
Sbjct: 613 ENKSETW 619
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 TKNGSDT 7
TK+GS+T
Sbjct: 542 TKSGSNT 548
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 6 DTWYI 10
DTWY+
Sbjct: 183 DTWYL 187
>sp|VE8E2_HPV51|PROTEIN E8^E2C|Human papillomavirus 51
Query: 2 KNGSDTWY 9
KN S TW+
Sbjct: 123 KNVSSTWH 130
104|SequenceR|525|516|TAVSITKNGS
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 3 VSITKNGS 10
VSITKN S
Sbjct: 497 VSITKNLS 504
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 3 VSITKNGS 10
VSITKN S
Sbjct: 497 VSITKNLS 504
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 3 VSITKNGS 10
VSITKN S
Sbjct: 497 VSITKNLS 504
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 3 VSITKNGS 10
VSITKN S
Sbjct: 497 VSITKNLS 504
>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)
Query: 3 VSITKNGS 10
+SITKN +
Sbjct: 276 ISITKNAT 283
>sp|NSP2_ROTWI|NON-STRUCTURAL protein 2|Rotavirus A (isolate RVA/Human/United
Query: 1 TAVSITKNGS 10
T +ITKNG+
Sbjct: 244 TYKNITKNGN 253
105|SequenceR|530|521|RGGDVTAVSI
>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GGDVTAVSI 10
G D TAVS+
Sbjct: 143 GSDYTAVSL 151
>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GGDVTAVSI 10
G D TAVS+
Sbjct: 143 GSDYTAVSL 151
>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GGDVTAVSI 10
G D TAVS+
Sbjct: 143 GSDYTAVSL 151
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 3 GDVTAVS 9
GDV AVS
Sbjct: 562 GDVMAVS 568
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 3 GDVTAVS 9
GDV AVS
Sbjct: 562 GDVMAVS 568
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 GGDVTAVSI 10
GGDVT +++
Sbjct: 1193 GGDVTHLAL 1201
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 3 GDVTAVS 9
GDV AVS
Sbjct: 565 GDVMAVS 571
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 3 GDVTAVS 9
GDV AVS
Sbjct: 564 GDVMAVS 570
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 3 GDVTAVS 9
GDV AVS
Sbjct: 565 GDVMAVS 571
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 3 GDVTAVS 9
GDV AVS
Sbjct: 470 GDVLAVS 476
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 3 GDVTAVS 9
GDV AVS
Sbjct: 565 GDVMAVS 571
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 3 GDVTAVS 9
GDV AVS
Sbjct: 550 GDVMAVS 556
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 GGDVTAV 8
GGDVT +
Sbjct: 2238 GGDVTRI 2244
106|SequenceR|535|526|FLTRRRGGDV
>sp|ORF24_TTVV3|ORF2/4 protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 4 RRRGGD 9
RRRGGD
Sbjct: 159 RRRGGD 164
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 2 LTRRRGGD 9
L RRRG D
Sbjct: 361 LKRRRGND 368
>sp|KITH_VZVO|THYMIDINE kinase|Varicella-zoster virus (strain Oka vaccine)
Query: 3 TRRRGGDV 10
TRR GDV
Sbjct: 70 TRRLNGDV 77
>sp|KITH_VZVD|THYMIDINE kinase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 TRRRGGDV 10
TRR GDV
Sbjct: 70 TRRLNGDV 77
>sp|ARBH_HHV8P|APOPTOSIS regulator Bcl-2 homolog|Human herpesvirus 8 type P
Query: 2 LTRRRG 7
LTRRRG
Sbjct: 145 LTRRRG 150
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 FLTRRRGGD 9
F TRR G D
Sbjct: 660 FNTRRTGND 668
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 FLTRRR 6
+LTRRR
Sbjct: 2274 YLTRRR 2279
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 FLTRRRGGD 9
LTR GGD
Sbjct: 447 LLTRDGGGD 455
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 4 RRRGGDV 10
RRR GD+
Sbjct: 249 RRRDGDL 255
>sp|PP71_HCMVA|PROTEIN pp71|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FLTRRRGGD 9
F ++RRGG+
Sbjct: 143 FQSQRRGGE 151
>sp|PP71_HCMVM|PROTEIN pp71|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FLTRRRGGD 9
F ++RRGG+
Sbjct: 143 FQSQRRGGE 151
>sp|UL56_HHV1E|PROTEIN UL56|Human herpesvirus 1 (strain HFEM)
Query: 2 LTRRRGG 8
LTR RGG
Sbjct: 172 LTRARGG 178
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FLTRRRG 7
FLT R+G
Sbjct: 317 FLTSRKG 323
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FLTRRRG 7
FLT R+G
Sbjct: 317 FLTSRKG 323
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 TRRRGGDV 10
T+RRG ++
Sbjct: 686 TQRRGAEI 693
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 TRRRGGDV 10
T+RRG ++
Sbjct: 685 TQRRGAEI 692
107|SequenceR|540|531|SLNRSFLTRR
***** No hits found ******
108|SequenceR|545|536|IARPESLNRS
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 RPESLNRS 10
RP+ +NRS
Sbjct: 996 RPDRINRS 1003
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 RPESLNRS 10
RP+ +NRS
Sbjct: 996 RPDRINRS 1003
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 RPESLNRS 10
RP+ +NRS
Sbjct: 996 RPDRINRS 1003
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 PESLNRS 10
PE++NRS
Sbjct: 495 PETVNRS 501
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 4 PESLNRS 10
PE++NRS
Sbjct: 495 PETVNRS 501
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 3 RPESLNRS 10
R ES+N+S
Sbjct: 15 RSESINKS 22
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 3 RPESLNRS 10
R ES+N+S
Sbjct: 15 RSESINKS 22
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 3 RPESLNRS 10
R ES+N+S
Sbjct: 15 RSESINKS 22
109|SequenceR|550|541|LPDVAIARPE
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 3 DVAIARPE 10
DVA+ARP+
Sbjct: 79 DVALARPK 86
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 3 DVAIARPE 10
DVA+ARP+
Sbjct: 79 DVALARPK 86
>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)
Query: 3 DVAIARPE 10
DVA+ARP+
Sbjct: 79 DVALARPK 86
>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)
Query: 3 DVAIARPE 10
DVA+ARP+
Sbjct: 79 DVALARPK 86
>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)
Query: 3 DVAIARPE 10
DVA+ARP+
Sbjct: 79 DVALARPK 86
>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)
Query: 3 DVAIARP 9
DVA+ARP
Sbjct: 79 DVALARP 85
>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)
Query: 3 DVAIARP 9
DVA+ARP
Sbjct: 79 DVALARP 85
>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New
Query: 3 DVAIARP 9
DVA+ARP
Sbjct: 79 DVALARP 85
>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)
Query: 3 DVAIARP 9
DVA+ARP
Sbjct: 79 DVALARP 85
>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South
Query: 3 DVAIARP 9
DVA+ARP
Sbjct: 79 DVALARP 85
>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)
Query: 3 DVAIARP 9
DVA+ARP
Sbjct: 79 DVALARP 85
>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong
Query: 3 DVAIARP 9
DVA+ARP
Sbjct: 79 DVALARP 85
>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong
Query: 3 DVAIARP 9
DVA+ARP
Sbjct: 79 DVALARP 85
>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)
Query: 3 DVAIARP 9
DVA+ARP
Sbjct: 79 DVALARP 85
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 DVAIARPE 10
D A+ARPE
Sbjct: 1292 DHAVARPE 1299
>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)
Query: 3 DVAIARP 9
DVA+ARP
Sbjct: 79 DVALARP 85
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 69 DVALGRPK 76
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 79 DVALGRPK 86
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 79 DVALGRPK 86
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 72 DVALGRPK 79
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 72 DVALGRPK 79
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 79 DVALGRPK 86
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 79 DVALGRPK 86
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 72 DVALGRPK 79
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 1 LPDVAIARPE 10
LPD +I PE
Sbjct: 146 LPDTSIYNPE 155
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 72 DVALGRPK 79
>sp|HEMA_INBF8|HEMAGGLUTININ B virus (strain B/Finland/150/1990)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 64 DVALGRPK 71
>sp|HEMA_INBF7|HEMAGGLUTININ B virus (strain B/Finland/149/1990)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 64 DVALGRPK 71
>sp|HEMA_INBF6|HEMAGGLUTININ B virus (strain B/Finland/148/1990)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 64 DVALGRPK 71
>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 76 DVALGRPK 83
>sp|HEMA_INBF9|HEMAGGLUTININ B virus (strain B/Finland/151/1990)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 64 DVALGRPK 71
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 2 PDVAIARP 9
PDV RP
Sbjct: 77 PDVGTPRP 84
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 PDVAIARP 9
P VA++RP
Sbjct: 244 PTVAVSRP 251
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 PDVAIA 7
PD+AIA
Sbjct: 222 PDIAIA 227
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 2 PDVAIA 7
PD+AIA
Sbjct: 222 PDIAIA 227
>sp|HEMA_INBNA|HEMAGGLUTININ B virus (strain B/Nagasaki/1/1987)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 64 DVALGRPK 71
>sp|HEMA_INBF2|HEMAGGLUTININ B virus (strain B/Finland/56/1988)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 64 DVALGRPK 71
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 1 LPDVAIARPE 10
LPD I PE
Sbjct: 85 LPDARIYNPE 94
>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 75 DVALGRPK 82
>sp|HEMA_INBGL|HEMAGGLUTININ B virus (strain B/GL/1954)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 75 DVALGRPK 82
>sp|HEMA_INBF5|HEMAGGLUTININ B virus (strain B/Finland/147/1990)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 64 DVALGRPK 71
>sp|HEMA_INBF4|HEMAGGLUTININ B virus (strain B/Finland/146/1990)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 64 DVALGRPK 71
>sp|HEMA_INBF3|HEMAGGLUTININ B virus (strain B/Finland/145/1990)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 64 DVALGRPK 71
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 3 DVAIARPE 10
DVA RP+
Sbjct: 72 DVAFGRPK 79
>sp|HEMA_INBF1|HEMAGGLUTININ B virus (strain B/Finland/24/1985)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 64 DVALGRPK 71
>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 71 DVALGRPK 78
>sp|HEMA_INBFU|HEMAGGLUTININ B virus (strain B/Fukuoka/80/1981)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 64 DVALGRPK 71
>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)
Query: 3 DVAIARPE 10
DVA+ RP+
Sbjct: 64 DVALGRPK 71
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 LPDVAIARPE 10
LPD I PE
Sbjct: 112 LPDSTIYNPE 121
>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)
Query: 3 DVAIARP 9
DVA+ RP
Sbjct: 64 DVALGRP 70
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 PDVAIA 7
PDVAIA
Sbjct: 1936 PDVAIA 1941
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 1 LPDVAIARPE 10
LPD ++ PE
Sbjct: 82 LPDPSLYNPE 91
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 1 LPDVAIARPE 10
+PD ++ PE
Sbjct: 85 IPDASLYNPE 94
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 1 LPDVAIARPE 10
LPD + PE
Sbjct: 92 LPDTNVFNPE 101
110|SequenceR|555|546|YMFGRLPDVA
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 1 YMFGRLPD 8
++FG+ PD
Sbjct: 279 FVFGQTPD 286
>sp|PG209_MONPV|PROTEIN OPG209|Monkeypox virus (MPXV)
Query: 2 MFGRLPDVA 10
+F R PD+A
Sbjct: 138 VFNRFPDMA 146
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 MFGRLPDVA 10
MFG P+VA
Sbjct: 1092 MFGFNPEVA 1100
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 MFGRLPDVA 10
MFG P+VA
Sbjct: 1092 MFGFNPEVA 1100
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 MFGRLPDVA 10
MFG P+VA
Sbjct: 1092 MFGFNPEVA 1100
>sp|VP2_SVSAP|MINOR capsid protein VP2|Sapporo virus (isolate
Query: 3 FGRLPDVA 10
FG L DVA
Sbjct: 11 FGSLADVA 18
>sp|VP2_SVM93|MINOR capsid protein VP2|Sapporo virus (strain Human/United
Query: 3 FGRLPDVA 10
FG L DVA
Sbjct: 11 FGSLADVA 18
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 MFGRLPD 8
+ GR+PD
Sbjct: 2123 VMGRMPD 2129
>sp|HEMA_CVHN1|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N1)
Query: 1 YMFGRLP 7
Y FGR P
Sbjct: 336 YSFGRCP 342
111|SequenceR|560|551|GWDSWYMFGR
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 2 WDSWYMFG 9
WD W+ FG
Sbjct: 377 WDQWFPFG 384
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 WDSWYMF 8
W WY+F
Sbjct: 304 WSDWYLF 310
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 WDSWYMF 8
W WY+F
Sbjct: 304 WSDWYLF 310
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 WDSWYMF 8
W WY+F
Sbjct: 304 WSDWYLF 310
>sp|NSP2_ROTWI|NON-STRUCTURAL protein 2|Rotavirus A (isolate RVA/Human/United
Query: 2 WDSWYMF 8
W +WY F
Sbjct: 266 WQNWYAF 272
>sp|NSP2_ROTHW|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 2 WDSWYMF 8
W +WY F
Sbjct: 266 WQNWYAF 272
>sp|NSP2_ROTHT|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 2 WDSWYMF 8
W +WY F
Sbjct: 266 WQNWYAF 272
>sp|NSP2_ROTHP|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 2 WDSWYMF 8
W +WY F
Sbjct: 266 WQNWYAF 272
>sp|NSP2_ROTHL|NON-STRUCTURAL protein 2|Rotavirus A (strain
Query: 2 WDSWYMF 8
W +WY F
Sbjct: 266 WQNWYAF 272
>sp|NSP2_ROTHK|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 2 WDSWYMF 8
W +WY F
Sbjct: 266 WQNWYAF 272
>sp|NSP2_ROTHD|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 2 WDSWYMF 8
W +WY F
Sbjct: 266 WQNWYAF 272
>sp|NSP2_ROTH7|NON-STRUCTURAL protein 2|Rotavirus A (isolate RVA/Human/United
Query: 2 WDSWYMF 8
W +WY F
Sbjct: 266 WQNWYAF 272
>sp|NSP2_ROTH6|NON-STRUCTURAL protein 2|Rotavirus A (strain
Query: 2 WDSWYMF 8
W +WY F
Sbjct: 266 WQNWYAF 272
>sp|NSP2_ROTH3|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 2 WDSWYMF 8
W +WY F
Sbjct: 266 WQNWYAF 272
>sp|NSP2_ROTAD|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 2 WDSWYMF 8
W +WY F
Sbjct: 266 WQNWYAF 272
>sp|NSP2_ROT41|NON-STRUCTURAL protein 2|Rotavirus A (isolate
Query: 2 WDSWYMF 8
W +WY F
Sbjct: 266 WQNWYAF 272
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 3 DSWYMF 8
DSWY F
Sbjct: 863 DSWYTF 868
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 GWDSWYM 7
G+D WY+
Sbjct: 2684 GFDKWYV 2690
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 GWDSWYM 7
G+D WY+
Sbjct: 2684 GFDKWYV 2690
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 WDSWYM 7
W++W+M
Sbjct: 987 WEAWWM 992
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 WDSWYM 7
W++W+M
Sbjct: 978 WEAWWM 983
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 WDSWYMF 8
W SW+ +
Sbjct: 1085 WKSWFSY 1091
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 WDSWYMF 8
W SW+ +
Sbjct: 1085 WKSWFSY 1091
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 WDSWYMF 8
W SW+ +
Sbjct: 1085 WKSWFSY 1091
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 2 WDSWY 6
WD W+
Sbjct: 93 WDEWW 97
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 2 WDSWY 6
WD W+
Sbjct: 93 WDEWW 97
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 2 WDSWY 6
WD W+
Sbjct: 93 WDEWW 97
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 WDSWYMF 8
W SW+ +
Sbjct: 1085 WKSWFSY 1091
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 WDSWY 6
WD+W+
Sbjct: 980 WDTWW 984
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 1 GW----DSWYMF 8
GW D WY F
Sbjct: 355 GWEGLVDGWYCF 366
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 GWDSW 5
GW+SW
Sbjct: 877 GWESW 881
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 WDSWY 6
WD+W+
Sbjct: 980 WDTWW 984
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 WDSWYMF 8
W SW+ +
Sbjct: 1085 WKSWFSY 1091
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 2 WDSWY 6
W+SW+
Sbjct: 90 WESWW 94
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 2 WDSWY 6
W+SW+
Sbjct: 90 WESWW 94
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 GWDSWYMFGR 10
GW W M R
Sbjct: 92 GWAGWLMSPR 101
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 3 DSWYMFG 9
D W +FG
Sbjct: 512 DPWVLFG 518
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 3 DSWYMFG 9
D W +FG
Sbjct: 510 DPWVLFG 516
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 WDSWY 6
WD W+
Sbjct: 1006 WDQWW 1010
>sp|U18_HHV6U|PUTATIVE immediate early glycoprotein|Human herpesvirus 6A (strain
Query: 1 GWDSWYMF 8
W +WY +
Sbjct: 227 AWSNWYKY 234
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 WDSWY 6
WD W+
Sbjct: 1008 WDQWW 1012
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 WDSWY 6
WD W+
Sbjct: 1007 WDQWW 1011
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 2 WDSWY 6
W+SW+
Sbjct: 90 WESWW 94
>sp|IR01_HCMVA|UNCHARACTERIZED protein HKLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DSWYMFGR 10
D W M+GR
Sbjct: 134 DCWCMWGR 141
>sp|IR01_HCMVM|PROTEIN RL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 DSWYMFGR 10
D W M+GR
Sbjct: 134 DCWCMWGR 141
>sp|U18_HHV6Z|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (strain Z29)
Query: 1 GWDSWYMF 8
W +WY +
Sbjct: 227 AWTNWYKY 234
>sp|U18_HHV6H|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 1 GWDSWYMF 8
W +WY +
Sbjct: 227 AWTNWYKY 234
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 3 DSWYMFGR 10
D W + GR
Sbjct: 526 DQWTILGR 533
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 DSWYMFGR 10
D W + GR
Sbjct: 526 DQWTILGR 533
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 2 WDSWY 6
WD W+
Sbjct: 93 WDYWW 97
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 2 WDSWY 6
WD W+
Sbjct: 320 WDRWH 324
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 WDSWYMFGR 10
+D W F R
Sbjct: 763 YDGWTQFSR 771
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GWDSWY 6
G+D+W+
Sbjct: 2810 GFDAWF 2815
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GWDSWY 6
G+D+W+
Sbjct: 2810 GFDAWF 2815
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 GWDSW 5
GW SW
Sbjct: 899 GWKSW 903
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 2 WDSWYMF 8
+++WY+F
Sbjct: 311 YETWYLF 317
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 WDSWYMFG 9
WD +FG
Sbjct: 320 WDXLMLFG 327
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 WDSWYMFG 9
WD +FG
Sbjct: 320 WDRLMLFG 327
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 5 WYMFGR 10
W++F R
Sbjct: 523 WFLFSR 528
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 WDSWYMFG 9
WD +FG
Sbjct: 320 WDRLMLFG 327
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 WDSWYMFG 9
WD +FG
Sbjct: 320 WDRLMLFG 327
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 WYMFGR 10
W++F R
Sbjct: 538 WFLFSR 543
>sp|CORE5_ADE40|CORE-CAPSID bridging protein|Human adenovirus F serotype 40
Query: 3 DSWYMF 8
D WY F
Sbjct: 265 DPWYEF 270
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 WDSWYMFG 9
WD +FG
Sbjct: 320 WDRLMLFG 327
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 2 WDSWYMFG 9
WD +FG
Sbjct: 320 WDRLMLFG 327
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 WDSWYMFG 9
WD +FG
Sbjct: 320 WDRLMLFG 327
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 2 WDSWYMFG 9
WD +FG
Sbjct: 320 WDRLMLFG 327
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 WDSWYMFG 9
WD +FG
Sbjct: 320 WDRLMLFG 327
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 5 WYMFG 9
W++FG
Sbjct: 34 WFLFG 38
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 GWDSWYM 7
G+D W++
Sbjct: 2710 GFDKWFV 2716
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 GWDSWYM 7
G+D W++
Sbjct: 2710 GFDKWFV 2716
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 5 WYMFG 9
WY FG
Sbjct: 407 WYSFG 411
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 5 WYMFG 9
WY FG
Sbjct: 408 WYSFG 412
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 5 WYMFG 9
WY FG
Sbjct: 407 WYSFG 411
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 5 WYMFG 9
WY FG
Sbjct: 408 WYSFG 412
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 WDSWYM 7
W++W++
Sbjct: 982 WETWWI 987
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 5 WYMFG 9
WY FG
Sbjct: 408 WYSFG 412
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 5 WYMFG 9
WY FG
Sbjct: 407 WYSFG 411
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 5 WYMFG 9
WY FG
Sbjct: 408 WYSFG 412
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 GWDSW 5
GW SW
Sbjct: 3202 GWASW 3206
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 5 WYMFG 9
WY FG
Sbjct: 408 WYSFG 412
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 5 WYMFG 9
WY FG
Sbjct: 408 WYSFG 412
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 5 WYMFG 9
WY FG
Sbjct: 407 WYSFG 411
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 5 WYMFG 9
WY FG
Sbjct: 407 WYSFG 411
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 3 DSWYMFG 9
D W +FG
Sbjct: 359 DEWQVFG 365
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 3 DSWYMFG 9
D W +FG
Sbjct: 359 DEWQVFG 365
>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus
Query: 2 WDSWYMFG 9
WD+ FG
Sbjct: 460 WDTMIKFG 467
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 GWDSWYMFGR 10
GW W+ R
Sbjct: 322 GWWRWFSLPR 331
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GWDSWYMFGR 10
GW W + R
Sbjct: 92 GWAGWLLSPR 101
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 5 WYMFG 9
WY FG
Sbjct: 408 WYSFG 412
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 2 WDSWYMF 8
+ +WY+F
Sbjct: 312 YQTWYLF 318
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 WDSWYM 7
W++W++
Sbjct: 986 WETWWV 991
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 WDSWYMFG 9
W +W+ +G
Sbjct: 10 WQNWWKWG 17
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 WDSWYMF 8
+ +WY+F
Sbjct: 312 YQTWYLF 318
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GWDSWYM 7
GW W++
Sbjct: 250 GWMLWFL 256
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GWDSWYM 7
GW W++
Sbjct: 250 GWMLWFL 256
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GWDSWYMFGR 10
GW W + R
Sbjct: 92 GWAGWLLSPR 101
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GWDSWYMFGR 10
GW W + R
Sbjct: 92 GWAGWLLSPR 101
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GWDSWYMFGR 10
GW W + R
Sbjct: 92 GWAGWLLSPR 101
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GWDSWYMFGR 10
GW W + R
Sbjct: 92 GWAGWLLSPR 101
>sp|VU51_HHV6U|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6A (strain
Query: 1 GWDSWYMF 8
G+D W M
Sbjct: 166 GYDMWLML 173
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 GWDSWYMFGR 10
GW W + R
Sbjct: 92 GWAGWLLSPR 101
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 GWDSWYMFGR 10
GW W + R
Sbjct: 92 GWAGWLLSPR 101
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GWDSWYMFGR 10
GW W + R
Sbjct: 92 GWAGWLLSPR 101
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 WDSWY 6
W++W+
Sbjct: 985 WETWW 989
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 GWDSWYMFGR 10
GW W + R
Sbjct: 92 GWAGWLLSPR 101
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 GWDSWYMFGR 10
GW W + R
Sbjct: 92 GWAGWLLSPR 101
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 GWDSWYMFGR 10
GW W + R
Sbjct: 92 GWAGWLLSPR 101
112|SequenceR|565|556|IKAQDGWDSW
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 KAQDGWDSW 10
K GWD+W
Sbjct: 3217 KPSTGWDNW 3225
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 KAQDGWDSW 10
K GWD+W
Sbjct: 3217 KPSTGWDNW 3225
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 IKAQDGWDSW 10
+ A GWD W
Sbjct: 319 LAANLGWDRW 328
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 6 GWDSW 10
GWD W
Sbjct: 188 GWDQW 192
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 6 GWDSW 10
GWD W
Sbjct: 324 GWDRW 328
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 5 DGWDSW 10
D W+SW
Sbjct: 88 DEWESW 93
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 6 GWDSW 10
GW+SW
Sbjct: 877 GWESW 881
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 KAQDGWDSW 10
K GW SW
Sbjct: 3198 KPSQGWASW 3206
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 6 GWDSW 10
GW SW
Sbjct: 899 GWKSW 903
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 IKAQDGWDSW 10
+K +DG SW
Sbjct: 725 LKKKDGSISW 734
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 QDGWDSW 10
Q GW +W
Sbjct: 890 QYGWKTW 896
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 4 QDGWDSW 10
Q GW +W
Sbjct: 890 QYGWKTW 896
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 4 QDGWDSW 10
Q GW +W
Sbjct: 890 QYGWKTW 896
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 4 QDGWDSW 10
Q GW +W
Sbjct: 890 QYGWKTW 896
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 QDGWDSW 10
Q GW +W
Sbjct: 890 QYGWKTW 896
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 4 QDGWDSW 10
Q GW +W
Sbjct: 890 QYGWKTW 896
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 4 QDGWDSW 10
Q GW +W
Sbjct: 890 QYGWKTW 896
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 4 QDGWDSW 10
Q GW +W
Sbjct: 890 QYGWKTW 896
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 4 QDGWDSW 10
Q GW +W
Sbjct: 890 QYGWKTW 896
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 6 GWDSW 10
GW+ W
Sbjct: 939 GWEDW 943
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 4 QDGWDSW 10
Q GW +W
Sbjct: 890 QYGWKTW 896
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 KAQDGWDSW 10
K GW +W
Sbjct: 3213 KPSTGWSNW 3221
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 IKAQDGWDSW 10
+K +DG SW
Sbjct: 725 LKKKDGSISW 734
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 KAQDGWDSW 10
K GW +W
Sbjct: 3224 KPSTGWHNW 3232
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 AQDGWDS 9
A+DGW +
Sbjct: 1283 ARDGWTT 1289
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 AQDGWDS 9
A+DGW +
Sbjct: 1283 ARDGWTT 1289
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 AQDGWDS 9
A+DGW +
Sbjct: 1283 ARDGWTT 1289
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 7 WDSW 10
W+SW
Sbjct: 90 WESW 93
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 KAQDGWDSW 10
K + GW +W
Sbjct: 897 KLEMGWKAW 905
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 KAQDGWDSW 10
K GW +W
Sbjct: 3220 KPSTGWTNW 3228
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 KAQDGWDSW 10
K + GW +W
Sbjct: 901 KLEIGWKAW 909
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 7 WDSW 10
W+SW
Sbjct: 90 WESW 93
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 KAQDGWDSW 10
K + GW +W
Sbjct: 901 KLEIGWKAW 909
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 KAQDGWDSW 10
K W SW
Sbjct: 1199 KVNSSWLSW 1207
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 AQDGW 7
A+DGW
Sbjct: 1283 ARDGW 1287
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 3 AQDGWDSW 10
++DG D W
Sbjct: 9 SKDGLDDW 16
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 AQDGW 7
A+DGW
Sbjct: 1283 ARDGW 1287
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 3 AQDGWDSW 10
++DG D W
Sbjct: 9 SKDGLDDW 16
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 KAQDGWDSW 10
K + GW +W
Sbjct: 904 KFEMGWKAW 912
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 KAQDGWDSW 10
K + GW +W
Sbjct: 904 KFEMGWKAW 912
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 KAQDGWDSW 10
K + GW +W
Sbjct: 904 KFEMGWKAW 912
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 KAQDGWDSW 10
K + GW +W
Sbjct: 904 KFEMGWKAW 912
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 QDGWDSW 10
++ WD W
Sbjct: 1003 RETWDQW 1009
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 QDGWDSW 10
++ WD W
Sbjct: 1005 RETWDQW 1011
113|SequenceR|570|561|LGSKEIKAQD
>sp|VE2_HPV23|REGULATORY protein E2|Human papillomavirus 23
Query: 1 LGSKEIKAQD 10
L + EIKA+D
Sbjct: 62 LATSEIKAKD 71
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 4 KEIKAQD 10
+EIKA+D
Sbjct: 83 REIKARD 89
114|SequenceR|575|566|RDVGNLGSKE
>sp|YVAH_VACCC|UNCHARACTERIZED 14.5 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 GNLGSKE 10
GNL SKE
Sbjct: 82 GNLSSKE 88
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RDVGNLGSKE 10
RD GN S+E
Sbjct: 446 RDGGNSSSRE 455
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RDVGNLGSKE 10
RD GN S+E
Sbjct: 455 RDGGNSSSRE 464
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 1 RDVGNLGSKE 10
R+VG GS+E
Sbjct: 192 RNVGEHGSQE 201
115|SequenceR|580|571|SVLTQRDVGN
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 1 SVLTQRDVGN 10
S+L Q+D GN
Sbjct: 125 SLLVQKDAGN 134
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 SVLTQRDV 8
+++TQRDV
Sbjct: 1287 ALMTQRDV 1294
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 SVLTQRDV 8
+++TQRDV
Sbjct: 1287 ALMTQRDV 1294
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 SVLTQRDVG 9
SVL +RD G
Sbjct: 1183 SVLIKRDSG 1191
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 SVLTQRDVGN 10
SVL +DV N
Sbjct: 1305 SVLQSKDVSN 1314
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 4 TQRDVGN 10
+Q+D+GN
Sbjct: 294 SQKDIGN 300
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 SVLTQRDVG 9
SVL +RD G
Sbjct: 1184 SVLIKRDSG 1192
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 4 TQRDVGN 10
+Q+D+GN
Sbjct: 293 SQKDIGN 299
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 TQRDVGN 10
+QR VGN
Sbjct: 503 SQRSVGN 509
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 4 TQRDVGN 10
TQ+++GN
Sbjct: 296 TQKNIGN 302
>sp|UL26_HCMVM|TEGUMENT protein UL26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SVLTQRDV 8
++LT RDV
Sbjct: 77 TILTPRDV 84
>sp|UL26_HCMVA|TEGUMENT protein UL26|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SVLTQRDV 8
++LT RDV
Sbjct: 77 TILTPRDV 84
116|SequenceR|585|576|WEINDSVLTQ
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 WEINDSVLT 9
+EIND++L+
Sbjct: 1173 YEINDAILS 1181
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 WEINDSVLT 9
+EIND++L+
Sbjct: 1173 YEINDAILS 1181
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 WEINDSV 7
WEINDS
Sbjct: 53 WEINDST 59
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 WEINDS 6
WE+NDS
Sbjct: 53 WEVNDS 58
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 WEINDS 6
WE+NDS
Sbjct: 53 WEVNDS 58
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 WEINDS 6
WE+NDS
Sbjct: 53 WEVNDS 58
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 WEINDSVL 8
W++ D+VL
Sbjct: 214 WQLTDAVL 221
>sp|PHOSP_PIV5|PHOSPHOPROTEIN virus 5 (strain W3)
Query: 4 NDSVLTQ 10
NDS LTQ
Sbjct: 306 NDSFLTQ 312
>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 WEINDS 6
W +NDS
Sbjct: 489 WWVNDS 494
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 WEINDSV 7
WE ND+V
Sbjct: 2532 WEGNDTV 2538
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 1 WEINDSV 7
W IND++
Sbjct: 384 WYINDTI 390
117|SequenceR|590|581|TIGNPWEIND
>sp|VPU_HV1JR|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 5 PWEIND 10
PW+IND
Sbjct: 75 PWDIND 80
>sp|DR7_HHV6U|TRANSACTIVATOR protein DR7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TIGNPW 6
T+G+PW
Sbjct: 198 TVGDPW 203
>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TIGNPW 6
T+G+PW
Sbjct: 230 TVGDPW 235
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 5 PWEIN 9
PWE+N
Sbjct: 1831 PWEMN 1835
>sp|VPU_HV1EL|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 5 PWEIND 10
PW+I+D
Sbjct: 75 PWDIDD 80
>sp|VPU_HV1MN|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 5 PWEIND 10
PW IND
Sbjct: 75 PWVIND 80
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 TIGNPWEIN 9
T G PW+++
Sbjct: 1581 TYGGPWKLD 1589
>sp|VPU_HV1N5|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 5 PWEIND 10
PW++ND
Sbjct: 39 PWDVND 44
>sp|VPU_HV1BN|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 5 PWEIND 10
PW+I+D
Sbjct: 76 PWDIDD 81
>sp|CAHH_VARV|CELL surface-binding protein OPG105|Variola virus
Query: 4 NPWEIND 10
NP+++ND
Sbjct: 221 NPYKLND 227
>sp|CAHH_VAR67|CELL surface-binding protein OPG105|Variola virus (isolate
Query: 4 NPWEIND 10
NP+++ND
Sbjct: 221 NPYKLND 227
>sp|CAHH_VACCC|CELL surface-binding protein OPG105|Vaccinia virus (strain Copenhagen)
Query: 4 NPWEIND 10
NP+++ND
Sbjct: 221 NPYKLND 227
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 6 WEIND 10
WE+ND
Sbjct: 53 WEVND 57
>sp|CAHH_MONPV|CELL surface-binding protein OPG105|Monkeypox virus (MPXV)
Query: 4 NPWEIND 10
NP+++ND
Sbjct: 221 NPYKLND 227
>sp|CAHH_MONPZ|CELL surface-binding protein OPG105|Monkeypox virus (strain
Query: 4 NPWEIND 10
NP+++ND
Sbjct: 221 NPYKLND 227
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 6 WEIND 10
WE+ND
Sbjct: 53 WEVND 57
>sp|CAHH_VACCT|CELL surface-binding protein OPG105|Vaccinia virus (strain Tian Tan)
Query: 4 NPWEIND 10
NP+++ND
Sbjct: 221 NPYKLND 227
>sp|CAHH_VACCA|CELL surface-binding protein OPG105|Vaccinia virus (strain Ankara)
Query: 4 NPWEIND 10
NP+++ND
Sbjct: 221 NPYKLND 227
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 6 WEIND 10
WE+ND
Sbjct: 53 WEVND 57
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 6 WEIND 10
WEIND
Sbjct: 53 WEIND 57
>sp|VPU_HV1Z2|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 5 PWEIND 10
PW+I+D
Sbjct: 75 PWDIDD 80
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 1 TIGNPW 6
T+GNP+
Sbjct: 105 TVGNPY 110
>sp|VPU_HV1J3|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 5 PWEIND 10
PW+I+D
Sbjct: 74 PWDIDD 79
>sp|VPU_HV1BR|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 5 PWEIND 10
PW+I+D
Sbjct: 75 PWDIDD 80
>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)
Query: 5 PWEIND 10
PW I+D
Sbjct: 19 PWTISD 24
>sp|US02_HHV2H|PROTEIN US2|Human herpesvirus 2 (strain HG52)
Query: 2 IGNPWEIND 10
+G PW + D
Sbjct: 159 VGEPWPLPD 167
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 TIGNPW 6
T+GNP+
Sbjct: 70 TVGNPY 75
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 TIGNPWEIN 9
T G PW+ +
Sbjct: 1581 TYGGPWKFD 1589
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 GNPWEI 8
G PW +
Sbjct: 5748 GQPWSV 5753
>sp|VPU_HV1Z8|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 5 PWEIND 10
PW+I+D
Sbjct: 31 PWDIDD 36
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 GNPWEI 8
GN W+I
Sbjct: 4077 GNVWQI 4082
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 GNPWEI 8
GN W+I
Sbjct: 4077 GNVWQI 4082
>sp|US02_HHV11|PROTEIN US2|Human herpesvirus 1 (strain 17)
Query: 2 IGNPWEI 8
+G PW +
Sbjct: 159 VGEPWAV 165
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 GNPWEI 8
G PW+I
Sbjct: 1466 GAPWKI 1471
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 GNPWEI 8
G PW+I
Sbjct: 1462 GAPWKI 1467
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 IGNPWE 7
+GN WE
Sbjct: 1094 LGNKWE 1099
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 GNPWEI 8
G PW+I
Sbjct: 1466 GAPWKI 1471
118|SequenceR|595|586|SLLDLTIGNP
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 5 LTIGNP 10
LT+GNP
Sbjct: 69 LTVGNP 74
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 5 LTIGNP 10
LT+GNP
Sbjct: 104 LTVGNP 109
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 5 LTIGNP 10
LT+GNP
Sbjct: 436 LTVGNP 441
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 1 SLLDLTI 7
SLLDLT+
Sbjct: 525 SLLDLTV 531
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 SLLDLTI 7
SLLDLT+
Sbjct: 525 SLLDLTV 531
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 LDLTIG 8
LDLT+G
Sbjct: 2363 LDLTVG 2368
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 LDLTIG 8
LDLT+G
Sbjct: 2363 LDLTVG 2368
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 LDLTIG 8
LDLT+G
Sbjct: 2363 LDLTVG 2368
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 LDLTIG 8
LDLT+G
Sbjct: 2363 LDLTVG 2368
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 1 SLLDLTIGNP 10
+L+D +G+P
Sbjct: 80 TLIDAMLGDP 89
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 1 SLLDLTIGNP 10
+L+D +G+P
Sbjct: 81 TLIDALLGDP 90
>sp|CEP1_HHV7J|CYTOPLASMIC envelopment protein 1|Human herpesvirus 7 (strain JI)
Query: 2 LLDLTIGN 9
L+D+++GN
Sbjct: 41 LIDISVGN 48
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 3 LDLTIGNP 10
LDL + NP
Sbjct: 320 LDLPLNNP 327
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 1 SLLDLTIGNP 10
+L+D +G+P
Sbjct: 65 TLIDALLGDP 74
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 SLLDLTIGNP 10
+L+D +G+P
Sbjct: 81 TLIDALLGDP 90
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 SLLDLTIGNP 10
+L+D +G+P
Sbjct: 81 TLIDALLGDP 90
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 1 SLLDLTIGNP 10
+L+D +G+P
Sbjct: 81 TLIDALLGDP 90
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 1 SLLDLTIGNP 10
+L+D +G+P
Sbjct: 81 TLIDALLGDP 90
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 1 SLLDLTIGNP 10
+L+D +G+P
Sbjct: 65 TLIDALLGDP 74
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 1 SLLDLTIGNP 10
+L+D +G+P
Sbjct: 81 TLIDALLGDP 90
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 1 SLLDLTIGNP 10
+L+D +G+P
Sbjct: 81 TLIDALLGDP 90
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 SLLDLTIGNP 10
+L+D +G+P
Sbjct: 65 TLIDALLGDP 74
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 1 SLLDLTIGNP 10
+L+D +G+P
Sbjct: 81 TLIDALLGDP 90
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 SLLDLTIGNP 10
+L+D +G+P
Sbjct: 65 TLIDALLGDP 74
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 1 SLLDLTIGNP 10
+L+D +G+P
Sbjct: 82 TLIDALLGDP 91
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 1 SLLDLTIGNP 10
+L+D +G+P
Sbjct: 81 TLIDALLGDP 90
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 1 SLLDLTIGNP 10
+L+D +G+P
Sbjct: 81 TLIDALLGDP 90
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 1 SLLDLTIGNP 10
+L+D +G+P
Sbjct: 81 TLIDALLGDP 90
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 1 SLLDLTIGNP 10
+L+D +G+P
Sbjct: 81 TLIDALLGDP 90
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 1 SLLDLTIGNP 10
+L+D +G+P
Sbjct: 81 TLIDALLGDP 90
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 LLDLTIGN 9
+L LT+GN
Sbjct: 82 VLQLTLGN 89
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 SLLDLTIGNP 10
+L+D +G+P
Sbjct: 65 TLIDALLGDP 74
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 5 LTIGNP 10
LTIG+P
Sbjct: 42 LTIGHP 47
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 LLDLTIGN 9
+L LT+GN
Sbjct: 82 VLQLTLGN 89
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 LLDLTIGN 9
+L LT+GN
Sbjct: 82 VLQLTLGN 89
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 5 LTIGNP 10
LTIG+P
Sbjct: 42 LTIGHP 47
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 4 DLTIGN 9
+LTIGN
Sbjct: 673 ELTIGN 678
119|SequenceR|600|591|WYLRQSLLDL
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 3 LRQSLLDL 10
+RQ+LLDL
Sbjct: 251 IRQALLDL 258
>sp|MC007_MCV1|PROTEIN MC007|Molluscum contagiosum virus subtype 1
Query: 4 RQSLLDL 10
RQ+LLDL
Sbjct: 171 RQTLLDL 177
>sp|NCAP_DUGBV|NUCLEOPROTEIN virus
Query: 3 LRQSLLDL 10
+RQ+LLDL
Sbjct: 250 IRQALLDL 257
>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)
Query: 2 YLRQSLLD 9
YL QS++D
Sbjct: 304 YLHQSIMD 311
>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 YLRQSLLD 9
YL QS++D
Sbjct: 304 YLHQSIMD 311
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 2 YLRQSLLD 9
++RQ+L+D
Sbjct: 648 HMRQTLID 655
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 2 YLRQSLLD 9
++RQ+L+D
Sbjct: 648 HMRQTLID 655
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YLRQSLLD 9
++RQ+L+D
Sbjct: 648 HMRQTLID 655
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 YLRQSLLD 9
++RQ+L+D
Sbjct: 648 HMRQTLID 655
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 2 YLRQSLLD 9
++RQ+L+D
Sbjct: 648 HMRQTLID 655
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 1 WYLRQSLL 8
W +RQ+L+
Sbjct: 333 WIVRQTLI 340
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 5 QSLLDL 10
QSLLDL
Sbjct: 524 QSLLDL 529
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 5 QSLLDL 10
QSLLDL
Sbjct: 524 QSLLDL 529
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 1 WYLRQSLL 8
W +RQ+L+
Sbjct: 333 WIVRQTLV 340
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 1 WYLRQSLL 8
W +RQ+L+
Sbjct: 333 WIVRQTLV 340
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 YLRQSLLD 9
Y+RQS+ D
Sbjct: 184 YVRQSIED 191
>sp|UL96_HHV6Z|PROTEIN U68|Human herpesvirus 6B (strain Z29)
Query: 2 YLRQSL 7
YLRQS+
Sbjct: 6 YLRQSI 11
>sp|UL96_HHV6U|PROTEIN U68|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 YLRQSL 7
YLRQS+
Sbjct: 6 YLRQSI 11
120|SequenceR|605|596|LKSDVWYLRQ
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 1 LKSDVWY 7
LK+D+W+
Sbjct: 247 LKNDLWF 253
>sp|CEP2_HCMVM|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LKSDVWYL 8
+K+DVW L
Sbjct: 315 VKTDVWDL 322
>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LKSDVWYL 8
+K+DVW L
Sbjct: 315 VKTDVWDL 322
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 KSDVWY 7
KSD WY
Sbjct: 165 KSDKWY 170
>sp|VE2_HPV58|REGULATORY protein E2|Human papillomavirus 58
Query: 2 KSDVWYLRQ 10
K+D W L+Q
Sbjct: 88 KTDEWTLQQ 96
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 SDVWYL 8
SD+W L
Sbjct: 738 SDIWVL 743
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 SDVWYL 8
SD+W L
Sbjct: 738 SDIWVL 743
>sp|ORF4B_MERS1|NON-STRUCTURAL protein ORF4b|Middle East respiratory syndrome-related
Query: 4 DVWYLR 9
++WYLR
Sbjct: 65 NMWYLR 70
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 VWYLRQ 10
VWYL +
Sbjct: 441 VWYLNR 446
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 VWYLRQ 10
VWYL +
Sbjct: 441 VWYLNR 446
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 KSDVWYLRQ 10
K+D W L++
Sbjct: 996 KNDTWRLKR 1004
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 KSDVWYLRQ 10
K+D W L++
Sbjct: 1000 KNDTWRLKR 1008
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 KSDVWYLRQ 10
K+D W L++
Sbjct: 1000 KNDTWRLKR 1008
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 SDVWY 7
SDVW+
Sbjct: 536 SDVWH 540
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 SDVWY 7
SDVW+
Sbjct: 536 SDVWH 540
121|SequenceR|610|601|SSLQHLKSDV
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 2 SLQHLKSDV 10
+LQH +SDV
Sbjct: 210 ALQHSRSDV 218
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 1 SSLQHLKSDV 10
+SLQ KSDV
Sbjct: 237 ASLQASKSDV 246
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 1 SSLQHLKSDV 10
+SLQ KSDV
Sbjct: 209 ASLQANKSDV 218
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 1 SSLQHLKSDV 10
+SLQ KSDV
Sbjct: 209 ASLQANKSDV 218
>sp|GK_HHV1R|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R15)
Query: 2 SLQHLKSDV 10
SLQHL + V
Sbjct: 6 SLQHLSTVV 14
>sp|GK_HHV1M|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain MP)
Query: 2 SLQHLKSDV 10
SLQHL + V
Sbjct: 6 SLQHLSTVV 14
>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)
Query: 2 SLQHLKSDV 10
SLQHL + V
Sbjct: 6 SLQHLSTVV 14
>sp|GK_HHV19|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R19)
Query: 2 SLQHLKSDV 10
SLQHL + V
Sbjct: 6 SLQHLSTVV 14
>sp|GK_HHV11|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain 17)
Query: 2 SLQHLKSDV 10
SLQHL + V
Sbjct: 6 SLQHLSTVV 14
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 2 SLQHLKSDV 10
SLQ KSDV
Sbjct: 242 SLQANKSDV 250
122|SequenceR|615|606|GSFDISSLQH
>sp|FUS_PI3H4|FUSION glycoprotein F0|Human parainfluenza 3 virus (strain
Query: 4 DISSLQH 10
DI+ LQH
Sbjct: 21 DITKLQH 27
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 2 SFDISSLQ 9
S+DI SLQ
Sbjct: 395 SYDIVSLQ 402
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 SFDISSLQ 9
SF++ SLQ
Sbjct: 25 SFEVESLQ 32
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 GSFDISS 7
GSF++SS
Sbjct: 451 GSFNVSS 457
123|SequenceR|620|611|TKRNGGSFDI
>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)
Query: 3 RNGGSFDI 10
R GGSFDI
Sbjct: 484 RGGGSFDI 491
>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 RNGGSFDI 10
R GGSFDI
Sbjct: 484 RGGGSFDI 491
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 3 RNGGSFDI 10
R GGSF++
Sbjct: 484 RGGGSFEV 491
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 TKRNGGSFDI 10
TKR SFDI
Sbjct: 390 TKRELKSFDI 399
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 TKRNGGSFDI 10
TKR SFDI
Sbjct: 390 TKRELKSFDI 399
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 2 KRNGGSFDI 10
KR+GG++ I
Sbjct: 313 KRSGGTYGI 321
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 NGGSFD 9
N GSFD
Sbjct: 284 NNGSFD 289
>sp|VL2_HPV35|MINOR capsid protein L2|Human papillomavirus 35
Query: 1 TKRNGGSFDI 10
T N G FDI
Sbjct: 353 TSLNDGMFDI 362
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 3 RNGGSFDI 10
RNG F+I
Sbjct: 647 RNGSVFEI 654
>sp|SCP_HHV6U|SMALL capsomere-interacting protein|Human herpesvirus 6A (strain
Query: 2 KRNGGSFD 9
K+NGG+ D
Sbjct: 57 KQNGGNVD 64
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 2 KRNGGSF 8
KR+GG++
Sbjct: 313 KRSGGTY 319
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 2 KRNGGSF 8
KR+GG++
Sbjct: 313 KRSGGTY 319
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 KRNGGSFDI 10
K N G FDI
Sbjct: 2020 KVNDGVFDI 2028
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 1 TKRNGGSFD 9
+KRN G D
Sbjct: 57 SKRNDGDLD 65
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TKRNGG 6
TK+NGG
Sbjct: 150 TKKNGG 155
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 NGGSFDI 10
+GG++DI
Sbjct: 1308 SGGAYDI 1314
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 4 NGGSFDI 10
+GG++DI
Sbjct: 1304 SGGAYDI 1310
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 NGGSFDI 10
+GG++DI
Sbjct: 1306 SGGAYDI 1312
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 4 NGGSFDI 10
+GG++DI
Sbjct: 1311 SGGAYDI 1317
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 NGGSFDI 10
+GG++DI
Sbjct: 1306 SGGAYDI 1312
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 NGGSFDI 10
+GG++DI
Sbjct: 1306 SGGAYDI 1312
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 NGGSFDI 10
+GG++DI
Sbjct: 1306 SGGAYDI 1312
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 NGGSFDI 10
+GG++DI
Sbjct: 1306 SGGAYDI 1312
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 NGGSFDI 10
+GG++DI
Sbjct: 1306 SGGAYDI 1312
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 NGGSFDI 10
+GG++DI
Sbjct: 1306 SGGAYDI 1312
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 NGGSFDI 10
+GG++DI
Sbjct: 1310 SGGAYDI 1316
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 4 NGGSFDI 10
+GG++DI
Sbjct: 1306 SGGAYDI 1312
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 NGGSFDI 10
+GG++DI
Sbjct: 1306 SGGAYDI 1312
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 NGGSFDI 10
+GG++DI
Sbjct: 1306 SGGAYDI 1312
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 NGGSFDI 10
+GG++DI
Sbjct: 1306 SGGAYDI 1312
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 NGGSFDI 10
+GG++DI
Sbjct: 1311 SGGAYDI 1317
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 NGGSFDI 10
+GG++DI
Sbjct: 1306 SGGAYDI 1312
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 1 TKRNGG 6
TK+NGG
Sbjct: 150 TKKNGG 155
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 1 TKRNGG 6
TK+NGG
Sbjct: 150 TKKNGG 155
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 5 GGSFDI 10
GGSF++
Sbjct: 1829 GGSFEV 1834
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 5 GGSFDI 10
GGSF++
Sbjct: 1829 GGSFEV 1834
>sp|SCP_HHV6Z|SMALL capsomere-interacting protein|Human herpesvirus 6B (strain Z29)
Query: 2 KRNGGSFD 9
K+NGG+ D
Sbjct: 58 KQNGGNVD 65
>sp|SCP_HHV6H|SMALL capsomere-interacting protein|Human herpesvirus 6B (HHV-6 variant
Query: 2 KRNGGSFD 9
K+NGG+ D
Sbjct: 58 KQNGGNVD 65
124|SequenceR|625|616|TSSILTKRNG
>sp|NSP1_ROTH6|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 2 SSILTKRNG 10
SS LTKR G
Sbjct: 32 SSTLTKRKG 40
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 2 SSILTKRNG 10
+SIL RNG
Sbjct: 1243 NSILAMRNG 1251
>sp|NSP1_ROTHD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 3 SILTKRNG 10
S LTKR G
Sbjct: 33 STLTKRKG 40
>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)
Query: 3 SILTKRNG 10
SILT R G
Sbjct: 304 SILTSRGG 311
125|SequenceR|630|621|HSLFDTSSIL
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 HSLFDTSS 8
H+LFD S+
Sbjct: 2245 HTLFDMSA 2252
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 HSLFDTSS 8
H+LFD S+
Sbjct: 2247 HTLFDMSA 2254
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 HSLFDTSS 8
H+LFD S+
Sbjct: 2161 HTLFDMSA 2168
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 HSLFDTSS 8
H+LFD S+
Sbjct: 2199 HTLFDMSA 2206
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 HSLFDTSS 8
H+LFD S+
Sbjct: 881 HTLFDMSA 888
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 HSLFDTSS 8
H+LFD S+
Sbjct: 2212 HTLFDMSA 2219
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 HSLFDTSS 8
H+LFD S+
Sbjct: 2245 HTLFDMSA 2252
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 HSLFDTSS 8
H+LFD S+
Sbjct: 2245 HTLFDMSA 2252
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 HSLFDTSS 8
H+LFD S+
Sbjct: 2246 HTLFDMSA 2253
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 HSLFDTSS 8
H+LFD S+
Sbjct: 2199 HTLFDMSA 2206
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 HSLFDTSS 8
H+LFD S+
Sbjct: 2228 HTLFDMSA 2235
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 HSLFDTSS 8
H+LFD S+
Sbjct: 2228 HTLFDMSA 2235
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 HSLFDTSS 8
H+LFD S+
Sbjct: 2234 HTLFDMSA 2241
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 HSLFDTSS 8
H+LFD S+
Sbjct: 2220 HTLFDMSA 2227
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 HSLFDTSS 8
H+LFD S+
Sbjct: 2206 HTLFDMSA 2213
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 HSLFDTSS 8
H+LFD S+
Sbjct: 2206 HTLFDMSA 2213
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 HSLFDTSS 8
H+LFD S+
Sbjct: 2143 HTLFDMSA 2150
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 HSLFDTSS 8
H+LFD S+
Sbjct: 2169 HTLFDMSA 2176
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 HSLFDTSS 8
H+LFD S+
Sbjct: 2209 HTLFDMSA 2216
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 HSLFDTSS 8
H+LFD S+
Sbjct: 2206 HTLFDMSA 2213
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 HSLFDTSS 8
H+LFD S+
Sbjct: 2202 HTLFDMSA 2209
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 HSLFDTSS 8
H+LFD S+
Sbjct: 2229 HTLFDMSA 2236
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 LFDTSSIL 10
+FDT S+L
Sbjct: 3920 IFDTPSVL 3927
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 LFDTSSIL 10
+FDT S+L
Sbjct: 3920 IFDTPSVL 3927
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 SLFDTS 7
S+FDTS
Sbjct: 598 SIFDTS 603
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 2 SLFDTS 7
S+FDTS
Sbjct: 598 SIFDTS 603
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 2 SLFDTS 7
S+FDTS
Sbjct: 598 SIFDTS 603
126|SequenceR|635|626|AIGFPHSLFD
>sp|PG042_VACCC|VIRION nicking-joining enzyme|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 GFPHSLF 9
G PHS+F
Sbjct: 197 GVPHSVF 203
>sp|PG042_MONPV|VIRION nicking-joining enzyme|Monkeypox virus (MPXV)
Query: 3 GFPHSLF 9
G PHS+F
Sbjct: 197 GVPHSVF 203
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 GFPHSLF 9
GFP S+F
Sbjct: 171 GFPFSIF 177
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 IGFPH 6
+GFPH
Sbjct: 632 VGFPH 636
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 2 IGFPHSLFD 10
+GF ++LFD
Sbjct: 702 VGFVNALFD 710
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 5 PHSLFD 10
PH LFD
Sbjct: 882 PHLLFD 887
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 4 FPHSLFD 10
FP++ FD
Sbjct: 196 FPYTAFD 202
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 GFPH 6
GFPH
Sbjct: 129 GFPH 132
127|SequenceR|640|631|KDEFVAIGFP
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 EFVAIGFP 10
E++ +GFP
Sbjct: 2053 EYIGLGFP 2060
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 EFVAIGFP 10
E++ +GFP
Sbjct: 2053 EYICLGFP 2060
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 KDEFVA 6
KDEF+A
Sbjct: 2909 KDEFIA 2914
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 2 DEFVAIGFP 10
D F+ +G P
Sbjct: 1665 DRFIRVGVP 1673
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 2 DEFVAIGFP 10
D F+ +G P
Sbjct: 1665 DRFIRVGVP 1673
>sp|PHOSP_RABVP|PHOSPHOPROTEIN virus (strain Pasteur vaccins
Query: 4 FVAIGFP 10
+VA+ FP
Sbjct: 128 YVAVNFP 134
>sp|PHOSP_RABVS|PHOSPHOPROTEIN virus (strain SAD B19)
Query: 4 FVAIGFP 10
+VA+ FP
Sbjct: 128 YVAVNFP 134
>sp|PHOSP_RABVM|PHOSPHOPROTEIN virus (strain PM) (RABV)
Query: 4 FVAIGFP 10
+VA+ FP
Sbjct: 128 YVAVNFP 134
>sp|PHOSP_RABVE|PHOSPHOPROTEIN virus (strain ERA) (RABV)
Query: 4 FVAIGFP 10
+VA+ FP
Sbjct: 128 YVAVNFP 134
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 KDEFVAI 7
KD+F+AI
Sbjct: 728 KDKFMAI 734
>sp|NEF_HV1RH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 KDEFVAIGFP 10
+DE +GFP
Sbjct: 62 EDEDEEVGFP 71
128|SequenceR|645|636|DTWFVKDEFV
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 TWFVKDEFV 10
TWFV DEF+
Sbjct: 172 TWFVHDEFI 180
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 TWFVKDEFV 10
TWFV DEF+
Sbjct: 172 TWFVHDEFI 180
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 2 TWFVKDEFV 10
TW DEF+
Sbjct: 482 TWAYADEFI 490
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 DTWFVKDEF 9
+ WFV++ F
Sbjct: 243 ERWFVRNPF 251
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 DTWFVKDEF 9
+ WFV++ F
Sbjct: 243 ERWFVRNPF 251
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 DTWFVKDEF 9
+ WFV++ F
Sbjct: 243 ERWFVRNPF 251
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 WFVKD 7
WFV+D
Sbjct: 299 WFVQD 303
>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TWFVK 6
TWFV+
Sbjct: 303 TWFVQ 307
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 WFVKDEFV 10
W +K EFV
Sbjct: 717 WAIKWEFV 724
>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TWFVK 6
TWFV+
Sbjct: 303 TWFVE 307
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 TWFVKDEFV 10
+W +K E+V
Sbjct: 711 SWVIKWEYV 719
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 TWFVKDEFV 10
+W VK E++
Sbjct: 715 SWVVKWEYI 723
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 TWFVKDEFV 10
+W VK E+V
Sbjct: 716 SWAVKWEYV 724
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DTWFVKDEFV 10
D F++++FV
Sbjct: 119 DIRFIREQFV 128
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 DTWFVKDEFV 10
D F++++FV
Sbjct: 119 DIRFIREQFV 128
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 1 DTWFVKDEFV 10
D F++++FV
Sbjct: 119 DIRFIREQFV 128
129|SequenceR|650|641|AENELDTWFV
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 2 ENELDTWF 9
+ ELD WF
Sbjct: 1234 KEELDQWF 1241
>sp|REX_HTL1C|PROTEIN Rex|Human T-cell leukemia virus 1
Query: 3 NELDTW 8
+E+DTW
Sbjct: 134 SEMDTW 139
>sp|REX_HTL1A|PROTEIN Rex|Human T-cell leukemia virus 1
Query: 3 NELDTW 8
+E+DTW
Sbjct: 134 SEMDTW 139
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 ELDTWF 9
+ DTWF
Sbjct: 2833 DFDTWF 2838
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 ELDTWF 9
+ DTWF
Sbjct: 2833 DFDTWF 2838
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 NELDTWF 9
NEL WF
Sbjct: 488 NELKLWF 494
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 2 ENELDTWF 9
E+EL WF
Sbjct: 1235 ESELSHWF 1242
>sp|NS2A_CVHOC|NON-STRUCTURAL protein 2a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 ENELDTWF 9
EN+ D WF
Sbjct: 226 ENDDDAWF 233
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 ENELDTW 8
EN LD W
Sbjct: 3319 ENMLDVW 3325
>sp|VB18_VARV|ANKYRIN repeat protein B18|Variola virus
Query: 2 ENELDTWF 9
ENE+ T+F
Sbjct: 21 ENEIYTYF 28
>sp|VB18_VAR67|ANKYRIN repeat protein B18|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 ENELDTWF 9
ENE+ T+F
Sbjct: 21 ENEIYTYF 28
>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 ENELDTWF 9
ENE+ T+F
Sbjct: 21 ENEIYTYF 28
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 2 ENELDTWF 9
ENE+ T+F
Sbjct: 21 ENEIYTYF 28
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 2 ENELDTW 8
E+EL TW
Sbjct: 99 ESELRTW 105
>sp|PG061_MONPV|PROTEIN OPG061|Monkeypox virus (MPXV)
Query: 4 ELDTW 8
E DTW
Sbjct: 51 EFDTW 55
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 ENELDTWF 9
E E+D W+
Sbjct: 1857 EPEVDAWW 1864
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 ENELDTWF 9
E E+D W+
Sbjct: 1857 EPEVDAWW 1864
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 ENELDTWF 9
E E+D W+
Sbjct: 1857 EPEVDAWW 1864
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 ENELDTWF 9
E E+D W+
Sbjct: 1857 EPEVDAWW 1864
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 ENELDTWF 9
E E+D W+
Sbjct: 1857 EPEVDAWW 1864
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 ENELDTWF 9
E E+D W+
Sbjct: 1857 EPEVDAWW 1864
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 ENELDTWF 9
E E+D W+
Sbjct: 1857 EPEVDAWW 1864
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 ENELDTWF 9
E E+D W+
Sbjct: 1857 EPEVDAWW 1864
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 ENELDTWF 9
E E+D W+
Sbjct: 1857 EPEVDAWW 1864
>sp|TEG3_VZVO|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 ENELDTWF 9
E+E TWF
Sbjct: 133 EHENHTWF 140
>sp|TEG3_VZVD|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 ENELDTWF 9
E+E TWF
Sbjct: 133 EHENHTWF 140
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 ELDTW 8
+LDTW
Sbjct: 12 KLDTW 16
>sp|PG061_VACCC|PROTEIN OPG061|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 ELDTW 8
E DTW
Sbjct: 51 EFDTW 55
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 LDTWFV 10
LDTW V
Sbjct: 254 LDTWKV 259
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 LDTWFV 10
LDTW V
Sbjct: 254 LDTWKV 259
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 LDTWFV 10
LDTW V
Sbjct: 254 LDTWKV 259
>sp|PG061_VACCP|PROTEIN OPG061|Vaccinia virus (strain L-IVP) (VACV)
Query: 4 ELDTW 8
E DTW
Sbjct: 51 EFDTW 55
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 NELDTWFV 10
N+LD +FV
Sbjct: 4471 NKLDKFFV 4478
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 NELDTWFV 10
N+LD +FV
Sbjct: 4491 NKLDKFFV 4498
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 NELDTWFV 10
N+LD +FV
Sbjct: 4521 NKLDKFFV 4528
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 2 ENELDTWF 9
+ E D WF
Sbjct: 10 KKEFDEWF 17
>sp|PA_I01A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 ENELDTW 8
EN+ +TW
Sbjct: 136 ENKSETW 142
>sp|PA_I01A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 ENELDTW 8
EN+ +TW
Sbjct: 136 ENKSETW 142
>sp|NCAP_DUGBV|NUCLEOPROTEIN virus
Query: 2 ENELDTWF 9
+ E D WF
Sbjct: 10 KKEFDEWF 17
130|SequenceR|655|646|NASFIAENEL
>sp|TEG6_HHV2H|TEGUMENT protein UL55|Human herpesvirus 2 (strain HG52)
Query: 1 NASFIAENEL 10
NA++ AEN L
Sbjct: 26 NATWQAENAL 35
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 2 ASFIAENE 9
A+FI +NE
Sbjct: 427 AAFIGDNE 434
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NASFIAEN 8
NAS+ EN
Sbjct: 286 NASYFGEN 293
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 NASFIAEN 8
NAS+ EN
Sbjct: 286 NASYFGEN 293
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NASFIAEN 8
NAS+ EN
Sbjct: 286 NASYFGEN 293
131|SequenceR|660|651|LGNLRNASFI
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LGNLRNAS 8
LGN RNAS
Sbjct: 1084 LGNGRNAS 1091
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LGNLRNAS 8
LGN RNAS
Sbjct: 1087 LGNGRNAS 1094
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LGNLRNAS 8
LGN RNAS
Sbjct: 1088 LGNGRNAS 1095
>sp|B6_HHV6Z|PROTEIN B6|Human herpesvirus 6B (strain Z29)
Query: 2 GNLRNASF 9
GNL+NA F
Sbjct: 24 GNLKNAQF 31
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 1 LGNLRNASFI 10
GN R+ SFI
Sbjct: 270 FGNERSVSFI 279
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 1 LGNLRNASFI 10
GN R+ SFI
Sbjct: 270 FGNERSVSFI 279
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 1 LGNLRN 6
+GN+RN
Sbjct: 378 IGNIRN 383
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 1 LGNLRN 6
+GN+RN
Sbjct: 378 IGNIRN 383
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 LGNLRN 6
+GN+RN
Sbjct: 378 IGNIRN 383
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LGNLRN 6
+GN+RN
Sbjct: 378 IGNIRN 383
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LGNLRN 6
+GN+RN
Sbjct: 370 IGNIRN 375
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 1 LGNLRN 6
+GN+RN
Sbjct: 378 IGNIRN 383
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 1 LGNLRN 6
+GN+RN
Sbjct: 378 IGNIRN 383
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 1 LGNLRN 6
+GN+RN
Sbjct: 378 IGNIRN 383
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 1 LGNLRN 6
+GN+RN
Sbjct: 378 IGNIRN 383
>sp|DUSP_VACCC|DUAL specificity protein phosphatase OPG106|Vaccinia virus (strain
Query: 1 LGNLRNA 7
LGN +NA
Sbjct: 36 LGNYKNA 42
>sp|DUSP_MONPV|DUAL specificity protein phosphatase OPG106|Monkeypox virus (MPXV)
Query: 1 LGNLRNA 7
LGN +NA
Sbjct: 36 LGNYKNA 42
132|SequenceR|665|656|LISIELGNLR
>sp|TRX1_HCMVM|TRIPLEX capsid protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SIELGNLR 10
S+ELG+ R
Sbjct: 280 SVELGDFR 287
>sp|TRX1_HCMVA|TRIPLEX capsid protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 SIELGNLR 10
S+ELG+ R
Sbjct: 280 SVELGDFR 287
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 1 LISIELGNL 9
LIS++LG +
Sbjct: 156 LISVKLGKI 164
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 1 LISIELGNL 9
LIS++LG +
Sbjct: 155 LISVKLGKI 163
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 1 LISIELGNL 9
LIS++LG +
Sbjct: 156 LISVKLGKI 164
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 1 LISIELGNL 9
LIS++LG +
Sbjct: 156 LISVKLGKI 164
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 1 LISIELGNL 9
LIS++LG +
Sbjct: 156 LISVKLGKI 164
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 1 LISIELGNL 9
LIS++LG +
Sbjct: 155 LISVKLGKI 163
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 1 LISIELGNL 9
LIS++LG +
Sbjct: 155 LISVKLGKI 163
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 1 LISIELGNL 9
LIS++LG +
Sbjct: 156 LISVKLGKI 164
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 1 LISIELGNL 9
LIS++LG +
Sbjct: 155 LISVKLGKI 163
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 1 LISIELGNL 9
LIS++LG +
Sbjct: 156 LISVKLGKI 164
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 1 LISIELGNL 9
LIS++LG +
Sbjct: 155 LISVKLGKI 163
133|SequenceR|670|661|NLNEALISIE
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 NLNEALIS 8
NLN LIS
Sbjct: 40 NLNSPLIS 47
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 NLNEALIS 8
NLN LIS
Sbjct: 40 NLNSPLIS 47
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 NLNEALIS 8
NLN LIS
Sbjct: 40 NLNSPLIS 47
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 NLNEALIS 8
NLN LIS
Sbjct: 40 NLNSPLIS 47
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 NLNEALIS 8
NLN LIS
Sbjct: 40 NLNSPLIS 47
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 NLNEALIS 8
NLN LIS
Sbjct: 40 NLNSPLIS 47
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 NLNEALIS 8
NLN LIS
Sbjct: 40 NLNSPLIS 47
134|SequenceR|675|666|IDHPNNLNEA
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 IDHPN 5
IDHPN
Sbjct: 4334 IDHPN 4338
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 IDHPN 5
IDHPN
Sbjct: 4311 IDHPN 4315
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 IDHPN 5
IDHPN
Sbjct: 4311 IDHPN 4315
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 IDHPN 5
IDHPN
Sbjct: 4334 IDHPN 4338
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 IDHPNNL 7
+DHPN L
Sbjct: 334 VDHPNAL 340
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 IDHPNNLNE 9
+ HP+NL E
Sbjct: 715 LPHPDNLKE 723
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 1 IDHPNNLNE 9
+ HP+NL E
Sbjct: 715 LPHPDNLKE 723
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 IDHPNNLN 8
I H NN+N
Sbjct: 692 ISHTNNVN 699
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 IDHPNNLN 8
I H NN+N
Sbjct: 692 ISHTNNVN 699
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 DHPNNL 7
DHP N+
Sbjct: 645 DHPENM 650
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 DHPNNL 7
DHP N+
Sbjct: 645 DHPENM 650
>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 DHPNN 6
DHPN+
Sbjct: 130 DHPND 134
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 DHPNNL 7
DHP N+
Sbjct: 645 DHPENI 650
>sp|US10_HHV11|VIRION protein US10|Human herpesvirus 1 (strain 17)
Query: 2 DHPNNL 7
DHP NL
Sbjct: 48 DHPENL 53
>sp|US10_HHV1F|VIRION protein US10|Human herpesvirus 1 (strain F)
Query: 2 DHPNNL 7
DHP NL
Sbjct: 48 DHPENL 53
>sp|PG112_VAR67|LATE protein OPG112|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 HPNN 6
HPNN
Sbjct: 35 HPNN 38
>sp|H7_VARV|LATE protein H7|Variola virus
Query: 3 HPNN 6
HPNN
Sbjct: 35 HPNN 38
>sp|PG112_VACCA|LATE protein OPG112|Vaccinia virus (strain Ankara) (VACV)
Query: 3 HPNN 6
HPNN
Sbjct: 35 HPNN 38
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 HPNNLNEA 10
HP +NE
Sbjct: 1419 HPETVNEG 1426
>sp|H7_VACCT|LATE protein H7|Vaccinia virus (strain Tian Tan)
Query: 3 HPNN 6
HPNN
Sbjct: 35 HPNN 38
>sp|PG112_VACCC|LATE protein OPG112|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 HPNN 6
HPNN
Sbjct: 35 HPNN 38
>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)
Query: 4 PNNLNE 9
PN+LNE
Sbjct: 154 PNSLNE 159
>sp|PB1F2_I96A0|PROTEIN PB1-F2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 IDHPNNL 7
++HPN++
Sbjct: 30 LEHPNSI 36
>sp|PB1F2_I68A4|PROTEIN PB1-F2|Influenza A virus (strain A/Hong
Query: 1 IDHPNNL 7
++HPN++
Sbjct: 30 LEHPNSI 36
>sp|PB1F2_I01A2|PROTEIN PB1-F2|Influenza A virus (strain A/Chicken/Hong
Query: 1 IDHPNNL 7
++HPN++
Sbjct: 30 LEHPNSI 36
>sp|PG112_MONPV|LATE protein OPG112|Monkeypox virus (MPXV)
Query: 3 HPNN 6
HPNN
Sbjct: 35 HPNN 38
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 3 HPNN 6
HPNN
Sbjct: 265 HPNN 268
>sp|SHUT_HHV1K|VIRION host shutoff protein|Human herpesvirus 1 (strain KOS)
Query: 3 HPNN 6
HPNN
Sbjct: 263 HPNN 266
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 3 HPNN 6
HPNN
Sbjct: 265 HPNN 268
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 3 HPNN 6
HPNN
Sbjct: 265 HPNN 268
>sp|PG089_MONPV|PUTATIVE nuclease OPG089|Monkeypox virus (MPXV)
Query: 4 PNNLNE 9
PNNLN+
Sbjct: 253 PNNLNK 258
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 HPNNLN 8
H NN+N
Sbjct: 5864 HANNIN 5869
>sp|SHUT_HHV11|VIRION host shutoff protein|Human herpesvirus 1 (strain 17)
Query: 3 HPNN 6
HPNN
Sbjct: 263 HPNN 266
>sp|PB1F2_I01A0|PROTEIN PB1-F2|Influenza A virus (strain A/Silky
Query: 1 IDHPNNL 7
++HPN++
Sbjct: 30 LEHPNSI 36
>sp|PB1F2_I00A0|PROTEIN PB1-F2|Influenza A virus (strain A/Duck/Hong
Query: 1 IDHPNNL 7
++HPN++
Sbjct: 30 LEHPNSI 36
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 DHPNNLNE 9
DH NLNE
Sbjct: 755 DHVVNLNE 762
>sp|PG089_VACCC|PUTATIVE nuclease OPG089|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 PNNLNE 9
PNNLN+
Sbjct: 253 PNNLNK 258
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 IDHPNNLNEA 10
I HP NL+
Sbjct: 418 IPHPKNLHRG 427
135|SequenceR|680|671|EHFIVIDHPN
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 EHFIVIDHP 9
E F++ID P
Sbjct: 1179 EKFVIIDAP 1187
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 5 VIDHPN 10
++DHPN
Sbjct: 333 IVDHPN 338
>sp|GM_HHV6Z|ENVELOPE glycoprotein M|Human herpesvirus 6B (strain Z29)
Query: 2 HFIVIDHPN 10
H I I+ PN
Sbjct: 31 HLIAINFPN 39
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 EHFIVIDHPN 10
EH + DHP+
Sbjct: 718 EHISLEDHPD 727
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 4 IVIDHP 9
+++DHP
Sbjct: 605 VIVDHP 610
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 IVIDHP 9
+++DHP
Sbjct: 605 VIVDHP 610
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 2 HFIVIDH 8
HF+ I+H
Sbjct: 782 HFLCINH 788
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 HFIVIDHPN 10
H+I ID+ N
Sbjct: 2305 HWIKIDYGN 2313
>sp|IE247_HCMVT|45 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 1 EHFIVIDHP 9
EH + + HP
Sbjct: 276 EHTMPVTHP 284
136|SequenceR|685|676|RPQKLEHFIV
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RPQKLEH 7
RPQ +EH
Sbjct: 880 RPQPMEH 886
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RPQKLEH 7
RPQ +EH
Sbjct: 879 RPQPMEH 885
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RPQKLEH 7
RPQ +EH
Sbjct: 880 RPQPMEH 886
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 RPQKLEHFI 9
R QKLEH I
Sbjct: 1224 RIQKLEHTI 1232
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 RPQKLEHFI 9
R QKLEH I
Sbjct: 1224 RIQKLEHTI 1232
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 RPQKLEHFI 9
R QKLEH I
Sbjct: 1225 RIQKLEHTI 1233
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 RPQKLEHFI 9
R QKLEH I
Sbjct: 1225 RIQKLEHTI 1233
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 RPQKLEHFI 9
R QKLEH I
Sbjct: 1227 RIQKLEHTI 1235
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 RPQKLEHFI 9
R QKLEH I
Sbjct: 1227 RIQKLEHTI 1235
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 1 RPQKLEH 7
+PQ+LEH
Sbjct: 801 KPQQLEH 807
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 RPQKLEH 7
+PQ+LEH
Sbjct: 801 KPQQLEH 807
>sp|GK_VZVO|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Oka vaccine)
Query: 4 KLEHFIV 10
K EHFI+
Sbjct: 7 KTEHFII 13
>sp|GK_VZVD|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 KLEHFIV 10
K EHFI+
Sbjct: 7 KTEHFII 13
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 2 PQKLEHFIV 10
P+K+E F++
Sbjct: 233 PEKIEEFLI 241
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RPQKLEHF 8
RP ++ HF
Sbjct: 47 RPARIGHF 54
>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RPQKLEHF 8
RP ++ HF
Sbjct: 47 RPARIGHF 54
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 2 PQKLEHFI 9
PQ L+H I
Sbjct: 942 PQHLDHTI 949
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 2 PQKLEHFI 9
PQ L+H I
Sbjct: 942 PQHLDHTI 949
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RPQKLEHFIV 10
RP K FIV
Sbjct: 109 RPSKQRTFIV 118
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RPQKLEHFIV 10
RP K FIV
Sbjct: 109 RPSKQRTFIV 118
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RPQKLEHFIV 10
RP K FIV
Sbjct: 109 RPSKQRTFIV 118
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 RPQKLEHFIV 10
RP+ LE +IV
Sbjct: 396 RPRFLELYIV 405
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PQKLEHFIV 10
PQK+E ++
Sbjct: 592 PQKIECLVI 600
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 2 PQKLEHFIV 10
PQK+E ++
Sbjct: 592 PQKIECLVI 600
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 PQKLEHFIV 10
PQK+E ++
Sbjct: 592 PQKIECLVI 600
137|SequenceR|690|681|CADPARPQKL
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 3 DPARPQK 9
DP++P K
Sbjct: 808 DPSKPSK 814
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 CADPARP 7
C DPA P
Sbjct: 1046 CLDPAHP 1052
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 CADPARP 7
C DPA P
Sbjct: 1044 CLDPAHP 1050
>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PARPQKL 10
PARPQ +
Sbjct: 253 PARPQHV 259
>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PARPQKL 10
PARPQ +
Sbjct: 253 PARPQHV 259
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 4 PARPQK 9
P RPQK
Sbjct: 161 PPRPQK 166
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 2 ADPARP 7
+DPARP
Sbjct: 1232 SDPARP 1237
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 2 ADPARPQ 8
ADP+RP
Sbjct: 208 ADPSRPS 214
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 2 ADPARPQ 8
ADP+RP
Sbjct: 208 ADPSRPS 214
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 2 ADPARPQ 8
ADP+RP
Sbjct: 208 ADPSRPS 214
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 DPARPQKL 10
D RPQ+L
Sbjct: 706 DQLRPQRL 713
>sp|VP1_POVKI|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 350)
Query: 4 PARPQK 9
P RPQK
Sbjct: 5 PCRPQK 10
>sp|VP1_POVK6|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 60)
Query: 4 PARPQK 9
P RPQK
Sbjct: 5 PCRPQK 10
>sp|VP1_POVK3|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 380)
Query: 4 PARPQK 9
P RPQK
Sbjct: 5 PCRPQK 10
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 3 DPARPQKL 10
D RPQ+L
Sbjct: 706 DQLRPQRL 713
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 3 DPARPQKL 10
D RPQ+L
Sbjct: 706 DQLRPQRL 713
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 3 DPARPQKL 10
D RPQ+L
Sbjct: 704 DQLRPQRL 711
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 3 DPARPQKL 10
D RPQ+L
Sbjct: 706 DQLRPQRL 713
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 3 DPARPQKL 10
D RPQ+L
Sbjct: 706 DQLRPQRL 713
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 ADPARPQK 9
A P RP+K
Sbjct: 216 AVPGRPEK 223
138|SequenceR|695|686|QVSLECADPA
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 4 LECADPA 10
L CADPA
Sbjct: 195 LGCADPA 201
>sp|NS8B_SARS|ORF8B protein|Severe acute respiratory syndrome coronavirus
Query: 2 VSLECADPA 10
V++ C DPA
Sbjct: 44 VTINCQDPA 52
>sp|VP30_MABVM|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 QVSLECADP 9
++ L CADP
Sbjct: 82 KIGLPCADP 90
>sp|VP30_MABVR|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 QVSLECADPA 10
++ L C DPA
Sbjct: 82 KIGLPCTDPA 91
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VSLECAD 8
VSL+C D
Sbjct: 127 VSLKCTD 133
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VSLECAD 8
VSL+C D
Sbjct: 127 VSLKCTD 133
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VSLECAD 8
VSL+C D
Sbjct: 127 VSLKCTD 133
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VSLECAD 8
VSL+C D
Sbjct: 127 VSLKCTD 133
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VSLECAD 8
VSL+C D
Sbjct: 127 VSLKCTD 133
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VSLECAD 8
VSL+C D
Sbjct: 127 VSLKCTD 133
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 6 CADPA 10
CADP+
Sbjct: 476 CADPS 480
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 6 CADPA 10
CADP+
Sbjct: 476 CADPS 480
>sp|VP30_MABVP|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 QVSLECADP 9
++ L C DP
Sbjct: 82 KIGLPCTDP 90
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 3 SLECADPA 10
+L C DPA
Sbjct: 1043 ALPCLDPA 1050
>sp|VP30_MABVA|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 QVSLECADP 9
++ L C DP
Sbjct: 82 KIGLPCTDP 90
139|SequenceR|700|691|CGGNPQVSLE
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 GGNPQVSL 9
GGNP+VS+
Sbjct: 1139 GGNPRVSV 1146
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 GGNPQVSL 9
GGNP+VS+
Sbjct: 1139 GGNPRVSV 1146
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 GGNPQVSL 9
GGNP+VS+
Sbjct: 1139 GGNPRVSV 1146
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 GGNPQVSL 9
GGNP+VS+
Sbjct: 1139 GGNPRVSV 1146
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 GGNPQVSL 9
GGNP+VS+
Sbjct: 1139 GGNPRVSV 1146
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 GGNPQVSL 9
GGNP+VS+
Sbjct: 1139 GGNPRVSV 1146
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 GGNPQVSL 9
GGNP+VS+
Sbjct: 1139 GGNPRVSV 1146
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 GGNPQVSL 9
GGNP+VS+
Sbjct: 1139 GGNPRVSV 1146
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 GGNPQVSL 9
GGNP+VS+
Sbjct: 1139 GGNPRVSV 1146
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 2 GGNPQVSL 9
GGNP++S+
Sbjct: 1140 GGNPRISV 1147
>sp|REV_HV190|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 GNPQVSLE 10
G+PQ+SLE
Sbjct: 98 GSPQISLE 105
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GGNPQVS 8
GG+PQV+
Sbjct: 371 GGDPQVT 377
>sp|MB43_VZVO|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 CGGNPQ 6
C GNPQ
Sbjct: 30 CVGNPQ 35
>sp|MB43_VZVD|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 CGGNPQ 6
C GNPQ
Sbjct: 30 CVGNPQ 35
>sp|REV_HV1M2|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 GNPQVSLE 10
G+PQ+S+E
Sbjct: 98 GSPQISVE 105
>sp|REV_HV1MP|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 GNPQVSLE 10
G+PQ+S+E
Sbjct: 98 GSPQISVE 105
>sp|REV_HV1EL|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 GNPQVSLE 10
G+PQ+S+E
Sbjct: 98 GHPQISVE 105
>sp|REV_HV1Z6|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 GNPQVSLE 10
G+PQ+S+E
Sbjct: 98 GSPQISVE 105
>sp|REV_HV1MA|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 GNPQVSLE 10
G+PQ+S+E
Sbjct: 99 GSPQISVE 106
>sp|REV_HV1Z2|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 GNPQVSLE 10
G+PQ+S+E
Sbjct: 98 GSPQISVE 105
>sp|REV_HV196|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 GNPQVSLE 10
G+PQ+S+E
Sbjct: 98 GSPQISVE 105
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CGGNPQ 6
C GNP+
Sbjct: 794 CNGNPR 799
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 1 CGGNPQVS 8
CG NP ++
Sbjct: 243 CGVNPTIA 250
>sp|UL130_HCMVM|ENVELOPE glycoprotein UL130|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GNPQVSLE 10
GN Q+S+E
Sbjct: 135 GNVQISVE 142
>sp|REV_HV1U4|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 GNPQVSLE 10
G PQ+S+E
Sbjct: 105 GGPQISVE 112
>sp|UL130_HCMVA|UNCHARACTERIZED protein UL130|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GNPQVSLE 10
GN Q+S+E
Sbjct: 135 GNVQISVE 142
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GGNPQVSL 9
GG+P++ L
Sbjct: 377 GGDPEIVL 384
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 CGGNPQVSLE 10
C G +VSLE
Sbjct: 183 CKGVERVSLE 192
>sp|ORF23_HHV8P|PROTEIN ORF23|Human herpesvirus 8 type P
Query: 1 CGGNP 5
C GNP
Sbjct: 369 CDGNP 373
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 NPQVSL 9
NPQVS+
Sbjct: 346 NPQVSI 351
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 4 NPQVSLE 10
NP+ SLE
Sbjct: 190 NPRTSLE 196
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 CGGNPQVSLE 10
C G +VSLE
Sbjct: 183 CRGVERVSLE 192
140|SequenceR|705|696|LCLYECGGNP
>sp|PKG2_ADE02|PACKAGING protein 2|Human adenovirus C serotype 2
Query: 2 CLYECGGN 9
CL +CGGN
Sbjct: 136 CLQDCGGN 143
>sp|PKG2_ADE05|PACKAGING protein 2|Human adenovirus C serotype 5
Query: 2 CLYECGGN 9
CL +CGGN
Sbjct: 137 CLQDCGGN 144
>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)
Query: 3 LYECGGN 9
LYECG N
Sbjct: 209 LYECGQN 215
>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LYECGGN 9
LYECG N
Sbjct: 209 LYECGQN 215
>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant
Query: 3 LYECGGN 9
LYECG N
Sbjct: 209 LYECGQN 215
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 6 CGGNP 10
CGGNP
Sbjct: 1098 CGGNP 1102
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 6 CGGNP 10
CGGNP
Sbjct: 211 CGGNP 215
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 4 YECGGNP 10
Y C GNP
Sbjct: 792 YVCNGNP 798
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 1 LCLYECG-GN 9
LCL CG GN
Sbjct: 75 LCLLTCGRGN 84
>sp|CEP3_HCMVM|CYTOPLASMIC envelopment protein 3|Human cytomegalovirus (strain Merlin)
Query: 1 LCLYECGGN 9
LC CGGN
Sbjct: 66 LCGSGCGGN 74
>sp|CEP3_HCMVA|CYTOPLASMIC envelopment protein 3|Human cytomegalovirus (strain AD169)
Query: 1 LCLYECGGN 9
LC CGGN
Sbjct: 66 LCGSGCGGN 74
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 2 CLYECGG 8
CLY C G
Sbjct: 528 CLYNCLG 534
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 3 LYECGGNP 10
+ +CGG P
Sbjct: 2060 ILKCGGTP 2067
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 3 LYECGGNP 10
+ +CGG P
Sbjct: 2060 ILKCGGTP 2067
>sp|CVC1_HHV8P|CAPSID vertex component 1|Human herpesvirus 8 type P
Query: 1 LCLYECGG 8
+C+YE GG
Sbjct: 251 VCVYERGG 258
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 3 LYECGGNP 10
+ CGG P
Sbjct: 2065 ILRCGGTP 2072
Query: 1 LCLYECGGNP 10
LCL G+P
Sbjct: 362 LCLMRLWGHP 371
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 2 CLYECG 7
C+Y CG
Sbjct: 357 CVYWCG 362
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 YECGGNP 10
+ CG NP
Sbjct: 445 FPCGPNP 451
>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)
Query: 1 LCLYECGGN 9
+ +Y C GN
Sbjct: 650 MAIYVCSGN 658
>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LCLYECGGN 9
+ +Y C GN
Sbjct: 651 MAIYVCSGN 659
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 CLYECGGNP 10
CLY G+P
Sbjct: 921 CLYRNLGDP 929
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 CLYECGGNP 10
CLY G+P
Sbjct: 921 CLYRNLGDP 929
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 4 YECGGN 9
YE GGN
Sbjct: 329 YETGGN 334
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 4 YECGGN 9
YE GGN
Sbjct: 329 YETGGN 334
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 LCLYECGGN 9
LC Y+ GN
Sbjct: 822 LCQYQKAGN 830
>sp|DR7_HHV6U|TRANSACTIVATOR protein DR7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CLYECGG 8
CLY C G
Sbjct: 74 CLYVCCG 80
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 5 ECGGNP 10
+CGG P
Sbjct: 1223 DCGGMP 1228
>sp|UL20_HCMVA|UNCHARACTERIZED protein UL20|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CLYECG 7
C Y CG
Sbjct: 247 CYYRCG 252
>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CLYECGG 8
CLY C G
Sbjct: 106 CLYVCCG 112
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 2 CLYEC 6
CL++C
Sbjct: 8 CLFQC 12
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CLYEC 6
CL++C
Sbjct: 8 CLFQC 12
>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)
Query: 2 CLYECGG 8
CLY GG
Sbjct: 261 CLYIIGG 267
>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CLYECGG 8
CLY GG
Sbjct: 261 CLYIIGG 267
>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /
Query: 2 CLYECGG 8
CLY GG
Sbjct: 261 CLYIIGG 267
>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)
Query: 4 YECG 7
YECG
Sbjct: 242 YECG 245
>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 YECG 7
YECG
Sbjct: 242 YECG 245
>sp|IR06_HCMVA|UNCHARACTERIZED protein IRL6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LCLYECGGN 9
+C+ CG N
Sbjct: 65 ICVSSCGHN 73
>sp|UL92_HHV8P|PROTEIN ORF31|Human herpesvirus 8 type P
Query: 1 LCLYEC 6
CLY+C
Sbjct: 15 FCLYQC 20
>sp|IR06_HCMVM|UNCHARACTERIZED protein IRL6|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LCLYECGGN 9
+C+ CG N
Sbjct: 65 ICVSSCGHN 73
141|SequenceR|710|701|IQPAPLCLYE
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 QPAPLCLY 9
+PAP C+Y
Sbjct: 300 KPAPRCMY 307
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 APLCLYE 10
APLC++E
Sbjct: 26 APLCVHE 32
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IQPAPLC 7
++P P+C
Sbjct: 364 VRPVPVC 370
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 APLCLYE 10
APLC++E
Sbjct: 26 APLCVHE 32
>sp|HEMA_CVHN5|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N5)
Query: 5 PLCLYE 10
PLCL++
Sbjct: 189 PLCLFK 194
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 QPAPLC 7
+P PLC
Sbjct: 231 RPQPLC 236
>sp|HEMA_CVHN2|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N2)
Query: 5 PLCLYE 10
PLCL++
Sbjct: 189 PLCLFK 194
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 3 PAPLC 7
P PLC
Sbjct: 159 PTPLC 163
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 PAPLCLYE 10
P+P C Y+
Sbjct: 1186 PSPQCTYK 1193
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 IQPAPLC 7
+QP P C
Sbjct: 855 LQPTPQC 861
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 IQPAPLC 7
+QP P C
Sbjct: 853 LQPTPQC 859
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 5 PLCLYE 10
PLC Y+
Sbjct: 50 PLCFYQ 55
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 3 PAPLCLYE 10
P P+ LYE
Sbjct: 140 PRPVPLYE 147
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 QPAPLCLYE 10
+P LC YE
Sbjct: 819 RPPRLCAYE 827
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 2 QPAPLCLY 9
+P P C+Y
Sbjct: 107 RPMPGCMY 114
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 PAPLCLYE 10
P P C Y+
Sbjct: 52 PCPFCQYD 59
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 IQPAPLC 7
+QP P C
Sbjct: 848 LQPTPQC 854
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 PAPLCLYE 10
P P C Y+
Sbjct: 1186 PGPQCTYK 1193
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 PAPLCLYE 10
P P C Y+
Sbjct: 1186 PGPQCTYK 1193
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 IQPAPLCL 8
I PA +CL
Sbjct: 155 IDPAGVCL 162
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 IQPAPLCL 8
I PA +CL
Sbjct: 155 IDPAGVCL 162
>sp|HEMA_CVHN1|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N1)
Query: 5 PLCLYE 10
PLCL++
Sbjct: 186 PLCLFK 191
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 6 LCLYE 10
LC+YE
Sbjct: 297 LCIYE 301
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 6 LCLYE 10
LC+YE
Sbjct: 297 LCIYE 301
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 6 LCLYE 10
LC+YE
Sbjct: 297 LCIYE 301
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 6 LCLYE 10
LC+YE
Sbjct: 297 LCIYE 301
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 6 LCLYE 10
LC+YE
Sbjct: 297 LCIYE 301
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 IQPAPLCLYE 10
I+P LC+ +
Sbjct: 433 IKPGALCIID 442
142|SequenceR|715|706|PSHSSIQPAP
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 3 HSSIQPAP 10
HS I+PAP
Sbjct: 384 HSFIEPAP 391
>sp|VL2_HPV58|MINOR capsid protein L2|Human papillomavirus 58
Query: 3 HSSIQPAP 10
HS I PAP
Sbjct: 270 HSDISPAP 277
>sp|VL2_HPV33|MINOR capsid protein L2|Human papillomavirus 33
Query: 3 HSSIQPAP 10
HS I PAP
Sbjct: 270 HSDISPAP 277
>sp|ORF3_HEVCT|PROTEIN ORF3|Hepatitis E virus genotype 4
Query: 1 PSHSSIQPAP 10
PSH + QP P
Sbjct: 64 PSHLTFQPPP 73
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 PSHSSIQPAP 10
P H QP P
Sbjct: 1163 PEHKEKQPGP 1172
143|SequenceR|720|711|ACTYKPSHSS
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 1 ACTYKPSHSS 10
AC Y P+ SS
Sbjct: 278 ACVYGPAVSS 287
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 1 ACTYKPSHSS 10
AC Y P+ SS
Sbjct: 278 ACVYGPAVSS 287
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 1 ACTYKPSHSS 10
AC Y P+ SS
Sbjct: 278 ACVYGPAVSS 287
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 1 ACTYKPSHSS 10
AC Y P+ SS
Sbjct: 278 ACVYGPAVSS 287
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 1 ACTYKPSHSS 10
AC Y P+ SS
Sbjct: 278 ACVYGPAVSS 287
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 1 ACTYKPSHSS 10
AC Y P+ SS
Sbjct: 278 ACVYGPAVSS 287
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 1 ACTYKPSHSS 10
AC Y P+ SS
Sbjct: 278 ACVYGPAVSS 287
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 1 ACTYKPSHSS 10
AC Y P+ SS
Sbjct: 278 ACVYGPAVSS 287
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 1 ACTYKPSHSS 10
AC Y P+ SS
Sbjct: 278 ACVYGPAVSS 287
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 1 ACTYKPSHSS 10
AC Y P+ SS
Sbjct: 278 ACVYGPAVSS 287
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 1 ACTYKPSHSS 10
AC Y P+ SS
Sbjct: 278 ACVYGPAVSS 287
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 1 ACTYKPSHSS 10
AC Y P+ SS
Sbjct: 278 ACVYGPAVSS 287
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 1 ACTYKPSHSS 10
AC Y P+ SS
Sbjct: 278 ACVYGPAVSS 287
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 ACTYKPSHSS 10
AC Y P+ SS
Sbjct: 278 ACVYGPAVSS 287
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 1 ACTYKPSHSS 10
AC Y P+ SS
Sbjct: 278 ACVYGPAVSS 287
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 1 ACTYKPSHSS 10
AC Y P+ SS
Sbjct: 278 ACVYGPAVSS 287
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 1 ACTYKPSHSS 10
AC Y P+ SS
Sbjct: 278 ACVYGPAVSS 287
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 1 ACTYKPSHSS 10
AC Y P+ SS
Sbjct: 278 ACVYGPAVSS 287
>sp|PG159_MONPV|PROTEIN OPG159|Monkeypox virus (MPXV)
Query: 4 YKPSHSS 10
YKP HS+
Sbjct: 40 YKPKHST 46
>sp|PG159_VACCC|PROTEIN OPG159|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 YKPSHSS 10
YKP HS+
Sbjct: 40 YKPKHST 46
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 ACTYKPSHSS 10
AC PSHS+
Sbjct: 2516 ACDLTPSHSA 2525
>sp|PG159_VARV|PROTEIN OPG159|Variola virus
Query: 4 YKPSHSS 10
YKP HS+
Sbjct: 40 YKPKHST 46
>sp|PG159_VAR67|PROTEIN OPG159|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 YKPSHSS 10
YKP HS+
Sbjct: 40 YKPKHST 46
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 ACTYKPSHSS 10
AC PSHS+
Sbjct: 2515 ACDLTPSHSA 2524
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 ACTYKPSHSS 10
AC PSHS+
Sbjct: 2516 ACRLVPSHSA 2525
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 1 ACTYKPSHSS 10
AC Y P+ +S
Sbjct: 278 ACVYGPAVAS 287
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 YKPSHSS 10
Y PSH+S
Sbjct: 419 YLPSHAS 425
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 CTYKPSHS 9
C YKP+ S
Sbjct: 1521 CLYKPALS 1528
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 ACTYKPSHS 9
+CT+ SH+
Sbjct: 1008 SCTWPESHT 1016
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 ACTYKPSHSS 10
AC P+HS+
Sbjct: 2519 ACDLTPAHSA 2528
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 ACTYKPSHS 9
+CT+ SH+
Sbjct: 1008 SCTWPESHT 1016
>sp|VP1_POVWU|MAJOR capsid protein VP1|WU polyomavirus (WUPyV)
Query: 1 ACTYKPSHS 9
ACT KP S
Sbjct: 8 ACTAKPGRS 16
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 ACTYKPSHSS 10
AC+ P HS+
Sbjct: 2508 ACSLAPPHSA 2517
>sp|PG031_VAR67|PROTEIN C4|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 TYKPS 7
TYKPS
Sbjct: 146 TYKPS 150
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 ACTYKPSHSS 10
AC+ P HS+
Sbjct: 2516 ACSLTPPHSA 2525
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ACTYKPSHSS 10
AC+ P HS+
Sbjct: 2508 ACSLTPPHSA 2517
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 ACTYKPSHSS 10
AC+ P HS+
Sbjct: 2508 ACSLTPPHSA 2517
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 ACTYKPSHSS 10
AC+ P HS+
Sbjct: 2508 ACSLTPPHSA 2517
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 ACTYKPSHSS 10
AC+ P HS+
Sbjct: 2508 ACSLTPPHSA 2517
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 CTYKPSHS 9
CT+ SH+
Sbjct: 1000 CTWPASHT 1007
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 CTYKPSHS 9
CT+ SH+
Sbjct: 1000 CTWPASHT 1007
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 CTYKPSHS 9
CT+ SH+
Sbjct: 1002 CTWPASHT 1009
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 CTYKPSHS 9
CT+ SH+
Sbjct: 1002 CTWPASHT 1009
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 ACTYKPSHSS 10
AC+ P HS+
Sbjct: 2513 ACSLTPPHSA 2522
>sp|PG031_VACCC|PROTEIN C4|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 TYKPS 7
TYKPS
Sbjct: 146 TYKPS 150
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 CTYKPSHS 9
CT+ SH+
Sbjct: 996 CTWPKSHT 1003
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 CTYKPSHS 9
CT+ SH+
Sbjct: 996 CTWPKSHT 1003
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 CTYKPSHS 9
CT+ SH+
Sbjct: 996 CTWPKSHT 1003
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 CTYKPSHS 9
CT+ SH+
Sbjct: 996 CTWPKSHT 1003
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 CTYKPSHS 9
CT+ SH+
Sbjct: 996 CTWPKSHT 1003
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 ACTYKPS 7
CTY PS
Sbjct: 331 VCTYVPS 337
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 CTYKPS 7
CTY PS
Sbjct: 331 CTYVPS 336
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 ACTYKPSHSS 10
AC P HS+
Sbjct: 2530 ACALTPPHSA 2539
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 ACTYKPSHSS 10
AC P HS+
Sbjct: 2530 ACALTPPHSA 2539
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 ACTYKPSHSS 10
AC P HS+
Sbjct: 2530 ACALTPPHSA 2539
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 ACTYKPSHSS 10
AC P HS+
Sbjct: 2534 ACALTPPHSA 2543
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 ACTYKPSHSS 10
AC P HS+
Sbjct: 2510 ACALTPPHSA 2519
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 ACTYKPSHSS 10
AC P HS+
Sbjct: 2530 ACQLTPPHSA 2539
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 ACTYKPSHSS 10
AC P HS+
Sbjct: 2530 ACQLTPPHSA 2539
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 ACTYKPSHSS 10
AC P HS+
Sbjct: 2505 ACDLTPPHSA 2514
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 ACTYKPSHSS 10
AC+ P HS
Sbjct: 2520 ACSLVPPHSG 2529
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ACTYKPSHSS 10
AC P HS+
Sbjct: 2507 ACKLTPPHSA 2516
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 ACTYKPSHSS 10
AC P HS+
Sbjct: 2512 ACDLTPPHSA 2521
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ACTYKPSHSS 10
AC P HS+
Sbjct: 2507 ACKLTPPHSA 2516
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ACTYKPSHSS 10
AC P HS+
Sbjct: 2507 ACKLTPPHSA 2516
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ACTYKPSHSS 10
AC P HS+
Sbjct: 2507 ACKLTPPHSA 2516
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ACTYKPSHSS 10
AC P HS+
Sbjct: 2507 ACKLTPPHSA 2516
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 TYKPSHSS 10
TY SHSS
Sbjct: 473 TYNESHSS 480
Query: 1 ACTYKPSHSS 10
AC P HS+
Sbjct: 2507 ACKLTPPHSA 2516
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ACTYKPSHSS 10
AC P HS+
Sbjct: 2507 ACKLTPPHSA 2516
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 ACTYKPSHSS 10
AC P HS+
Sbjct: 2511 ACGLTPPHSA 2520
144|SequenceR|725|716|MTDPCACTYK
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 2 TDPCACTY 9
TDP +CT+
Sbjct: 265 TDPFSCTF 272
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 MTDPCACTYK 10
+TD C+ +YK
Sbjct: 65 LTDNCSRSYK 74
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 MTDPCACTYK 10
+TD C+ +YK
Sbjct: 65 LTDNCSRSYK 74
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 MTDPCACTYK 10
+TD C+ +YK
Sbjct: 65 LTDNCSRSYK 74
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 MTDPCACTYK 10
+TD C+ +YK
Sbjct: 65 LTDNCSRSYK 74
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 MTDPCACTYK 10
+TD C+ +YK
Sbjct: 65 LTDNCSRSYK 74
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 MTDPCACTYK 10
+TD C+ +YK
Sbjct: 65 LTDNCSRSYK 74
>sp|MIR2_HHV8P|E3 ubiquitin-protein ligase MIR2|Human herpesvirus 8 type P
Query: 4 PCACT 8
PCACT
Sbjct: 29 PCACT 33
>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)
Query: 1 MTDPCAC 7
+T PC C
Sbjct: 81 LTTPCIC 87
>sp|PG089_MONPV|PUTATIVE nuclease OPG089|Monkeypox virus (MPXV)
Query: 4 PCACTYK 10
PC CT +
Sbjct: 311 PCQCTVQ 317
>sp|PG089_VARV|PUTATIVE nuclease OPG089|Variola virus
Query: 4 PCACTYK 10
PC CT +
Sbjct: 311 PCQCTVQ 317
>sp|PG089_VAR67|PUTATIVE nuclease OPG089|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 PCACTYK 10
PC CT +
Sbjct: 311 PCQCTVQ 317
>sp|PG089_VACCC|PUTATIVE nuclease OPG089|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 PCACTYK 10
PC CT +
Sbjct: 311 PCQCTVQ 317
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 DPCAC 7
DPC C
Sbjct: 1125 DPCTC 1129
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 DPCAC 7
DPC C
Sbjct: 1125 DPCTC 1129
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 DPCAC 7
DPC C
Sbjct: 1125 DPCTC 1129
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 DPCAC 7
DPC C
Sbjct: 1129 DPCTC 1133
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 1 MTDPC 5
+TDPC
Sbjct: 479 VTDPC 483
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 1 MTDPC 5
+TDPC
Sbjct: 478 VTDPC 482
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 1 MTDPC 5
+TDPC
Sbjct: 480 VTDPC 484
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 1 MTDPC 5
+TDPC
Sbjct: 479 VTDPC 483
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 1 MTDPC 5
+TDPC
Sbjct: 480 VTDPC 484
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 1 MTDPC 5
+TDPC
Sbjct: 479 VTDPC 483
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 1 MTDPC 5
+TDPC
Sbjct: 478 VTDPC 482
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 1 MTDPC 5
+TDPC
Sbjct: 479 VTDPC 483
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 1 MTDPCACTYK 10
+TD C +YK
Sbjct: 65 LTDNCIRSYK 74
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 1 MTDPCACTYK 10
+TD C +YK
Sbjct: 66 LTDNCIRSYK 75
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 MTDPC 5
+TDPC
Sbjct: 481 VTDPC 485
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 1 MTDPC 5
+TDPC
Sbjct: 480 VTDPC 484
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 DPCAC 7
+PCAC
Sbjct: 1127 EPCAC 1131
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 MTDPC 5
+TDPC
Sbjct: 481 VTDPC 485
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 1 MTDPC 5
+TDPC
Sbjct: 479 VTDPC 483
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 4 PCACTY 9
PC+C++
Sbjct: 1969 PCSCSW 1974
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 1 MTDPCACTYK 10
+TD C YK
Sbjct: 370 ITDDCEIAYK 379
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 TDPCACTY 9
T PC C Y
Sbjct: 1586 TIPCLCNY 1593
>sp|RP18_VACCC|DNA-DIRECTED RNA polymerase 18 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 PCACTY 9
PC TY
Sbjct: 71 PCVITY 76
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 TDPCACTY 9
T PC C Y
Sbjct: 1586 TIPCLCNY 1593
>sp|RP18_MONPV|DNA-DIRECTED RNA polymerase 18 kDa|Monkeypox virus (MPXV)
Query: 4 PCACTY 9
PC TY
Sbjct: 71 PCVITY 76
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 TDPCACTY 9
T PC C Y
Sbjct: 1586 TIPCLCNY 1593
>sp|RP18_VACCA|DNA-DIRECTED RNA polymerase 18 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 4 PCACTY 9
PC TY
Sbjct: 71 PCVITY 76
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 3 DPCACTY 9
D C C Y
Sbjct: 461 DACLCQY 467
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 DPCACTY 9
D C C Y
Sbjct: 461 DACLCQY 467
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 DPCACTY 9
D C C Y
Sbjct: 462 DACLCQY 468
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 DPCACTY 9
D C C Y
Sbjct: 462 DACLCQY 468
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 3 DPCACTY 9
D C C Y
Sbjct: 462 DACLCQY 468
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 MTDPCAC 7
+ D CAC
Sbjct: 586 LLDECAC 592
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 MTDPCAC 7
+ D CAC
Sbjct: 586 LLDECAC 592
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 1 MTDPCACTY 9
+ D C C Y
Sbjct: 462 LHDACLCLY 470
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 TDPCACTY 9
T PC C Y
Sbjct: 1585 TLPCLCNY 1592
145|SequenceR|730|721|DPGLWMTDPC
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 DPGLWM 6
DPG WM
Sbjct: 959 DPGFWM 964
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DPGLWMTDP 9
DP W +DP
Sbjct: 277 DPEDWKSDP 285
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 3 GLWMTDP 9
G WM DP
Sbjct: 540 GPWMYDP 546
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 GLWMTDP 9
G WM DP
Sbjct: 540 GPWMYDP 546
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 GLWMTDP 9
G WM DP
Sbjct: 540 GPWMYDP 546
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 3 GLWMTDP 9
G WM DP
Sbjct: 540 GPWMYDP 546
>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean
Query: 5 WMTDPC 10
W+ +PC
Sbjct: 239 WLIEPC 244
>sp|E321_ADE35|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 35
Query: 5 WMTDPC 10
W T PC
Sbjct: 51 WFTKPC 56
>sp|VE2_HPV56|REGULATORY protein E2|Human papillomavirus 56
Query: 4 LWMTDP 9
LW+T+P
Sbjct: 44 LWLTEP 49
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 PGLWM 6
PGLW+
Sbjct: 445 PGLWI 449
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 PGLWM 6
PGLW+
Sbjct: 445 PGLWI 449
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 4 LWMTDP 9
LW+T+P
Sbjct: 101 LWLTNP 106
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 PGLWM 6
PGLW+
Sbjct: 445 PGLWI 449
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 PGLWM 6
PGLW+
Sbjct: 445 PGLWI 449
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 PGLWM 6
PGLW+
Sbjct: 445 PGLWI 449
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 PGLWM 6
PGLW+
Sbjct: 445 PGLWI 449
>sp|E321_ADE1P|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 11
Query: 5 WMTDPC 10
W T PC
Sbjct: 51 WFTKPC 56
>sp|E321_ADE1A|EARLY E3 20.2 kDa glycoprotein|Human adenovirus B serotype 11
Query: 5 WMTDPC 10
W T PC
Sbjct: 51 WFTKPC 56
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1205 PGIWQLD 1211
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1206 PGIWQLD 1212
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1204 PGIWQLD 1210
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1211 PGIWQLD 1217
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1200 PGIWQLD 1206
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1217 PGIWQLD 1223
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1217 PGIWQLD 1223
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 1 DPGLWMTD 8
DPG +TD
Sbjct: 562 DPGFSLTD 569
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1205 PGIWQLD 1211
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1210 PGIWQLD 1216
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1205 PGIWQLD 1211
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1205 PGIWQLD 1211
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1209 PGIWQLD 1215
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1217 PGIWQLD 1223
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1206 PGIWQLD 1212
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1206 PGIWQLD 1212
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1202 PGIWQLD 1208
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1205 PGIWQLD 1211
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1205 PGIWQLD 1211
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1207 PGIWQLD 1213
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1200 PGIWQLD 1206
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1202 PGIWQLD 1208
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1200 PGIWQLD 1206
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1203 PGIWQLD 1209
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1204 PGIWQLD 1210
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1202 PGIWQLD 1208
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1205 PGIWQLD 1211
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1200 PGIWQLD 1206
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1200 PGIWQLD 1206
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1209 PGIWQLD 1215
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1201 PGIWQLD 1207
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 DPGLWMTDP 9
+ G W+ DP
Sbjct: 526 ESGDWLDDP 534
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 PGLWMTD 8
PG W+ D
Sbjct: 581 PGCWIID 587
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1198 PGIWQLD 1204
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 PGLWMTD 8
PG W+ D
Sbjct: 568 PGCWIID 574
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 2 PGLWMTD 8
PG W+ D
Sbjct: 568 PGCWIID 574
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 2 PGLWMTD 8
PG W+ D
Sbjct: 574 PGCWIID 580
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 2 PGLWMTD 8
PG W+ D
Sbjct: 580 PGCWIID 586
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1205 PGIWQLD 1211
>sp|GD_HHV23|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain 333)
Query: 1 DPGLWMTDP 9
DP L M DP
Sbjct: 31 DPSLKMADP 39
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 2 PGLWMTD 8
PG W+ D
Sbjct: 574 PGCWIID 580
>sp|GD_HHV2H|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain HG52)
Query: 1 DPGLWMTDP 9
DP L M DP
Sbjct: 31 DPSLKMADP 39
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 2 PGLWMTD 8
PG W+ D
Sbjct: 568 PGCWIID 574
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 2 PGLWMTD 8
PG W+ D
Sbjct: 568 PGCWIID 574
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 2 PGLWMTD 8
PG W+ D
Sbjct: 568 PGCWIID 574
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 2 PGLWMT 7
PGLW +
Sbjct: 597 PGLWTS 602
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 2 PGLWMT 7
PGLW +
Sbjct: 614 PGLWTS 619
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 2 PGLWMTD 8
PG W+ D
Sbjct: 568 PGCWIID 574
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 2 PGLWMT 7
PGLW +
Sbjct: 614 PGLWTS 619
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 2 PGLWMTD 8
PG W+ D
Sbjct: 568 PGCWVID 574
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 2 PGLWMTD 8
PG W+ D
Sbjct: 581 PGCWVID 587
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 2 PGLWMTD 8
PG W+ D
Sbjct: 567 PGCWIID 573
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 PGLWMTD 8
PG W+ D
Sbjct: 567 PGCWIID 573
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 2 PGLWMTD 8
PG W+ D
Sbjct: 567 PGCWIID 573
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 2 PGLWMTD 8
PG W+ D
Sbjct: 567 PGCWIID 573
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 2 PGLWMT 7
PG+W T
Sbjct: 1145 PGVWNT 1150
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 PGLWMT 7
PG+W T
Sbjct: 1145 PGVWNT 1150
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PGLWMT 7
PG+W T
Sbjct: 1145 PGVWNT 1150
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PGLWMT 7
PG+W T
Sbjct: 1145 PGVWNT 1150
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 2 PGLWMT 7
PG+W T
Sbjct: 1145 PGVWNT 1150
>sp|BMRF2_EBVB9|PROTEIN BMRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 WMTDPC 10
W++ PC
Sbjct: 99 WVSAPC 104
>sp|BMRF2_EBVA8|PROTEIN BMRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 WMTDPC 10
W++ PC
Sbjct: 99 WVSAPC 104
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1215 PGVWQLD 1221
>sp|BMRF2_EBVG|PROTEIN BMRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 WMTDPC 10
W++ PC
Sbjct: 99 WVSAPC 104
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGLWMTD 8
PG+W D
Sbjct: 1215 PGVWQLD 1221
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 2 PGLWMTDP 9
P WMT P
Sbjct: 419 PTSWMTGP 426
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 1 DPGLWMT 7
+P LW T
Sbjct: 484 NPALWST 490
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 PGLWMTDP 9
P WMT P
Sbjct: 420 PTSWMTGP 427
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 2 PGLWMTDP 9
P WMT P
Sbjct: 422 PTSWMTGP 429
>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 WMTDP 9
W+TDP
Sbjct: 260 WLTDP 264
>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 WMTDP 9
W+TDP
Sbjct: 260 WLTDP 264
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 2 PGLWMTDP 9
P WMT P
Sbjct: 423 PTSWMTGP 430
>sp|UL41_HCMVA|UNCHARACTERIZED protein UL41|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PGLW 5
PGLW
Sbjct: 15 PGLW 18
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 2 PGLWM 6
PGLW+
Sbjct: 3 PGLWV 7
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 4 LWMTD 8
LWM+D
Sbjct: 2216 LWMSD 2220
>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66
Query: 4 LWMTDP 9
LW T+P
Sbjct: 101 LWRTEP 106
146|SequenceR|735|726|YCRKMDPGLW
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CRKMDP 7
CR MDP
Sbjct: 109 CRHMDP 114
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CRKMDP 7
CR MDP
Sbjct: 109 CRHMDP 114
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 YCRKMDP 7
YC K DP
Sbjct: 2212 YCNKFDP 2218
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 YCRKMDP 7
YC K DP
Sbjct: 2208 YCNKFDP 2214
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 5 MDPGLW 10
M PGLW
Sbjct: 1 MGPGLW 6
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 CRKMDPGL 9
C K+DP L
Sbjct: 252 CAKLDPKL 259
>sp|VIE2_HCMVT|VIRAL transcription factor IE2|Human cytomegalovirus (strain Towne)
Query: 3 RKMDP 7
RKMDP
Sbjct: 7 RKMDP 11
>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)
Query: 3 RKMDP 7
RKMDP
Sbjct: 7 RKMDP 11
>sp|VIE2_HCMVA|VIRAL transcription factor IE2|Human cytomegalovirus (strain AD169)
Query: 3 RKMDP 7
RKMDP
Sbjct: 7 RKMDP 11
>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 RKMDP 7
RKMDP
Sbjct: 7 RKMDP 11
>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 RKMDP 7
RKMDP
Sbjct: 7 RKMDP 11
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RKMDP 7
RKMDP
Sbjct: 7 RKMDP 11
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 6 DPGLW 10
DPG W
Sbjct: 959 DPGFW 963
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 6 DPGLW 10
DPG W
Sbjct: 2952 DPGFW 2956
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 RKMDPGLW 10
RK +P LW
Sbjct: 421 RKEEPVLW 428
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 6 DPGLW 10
DPG W
Sbjct: 2937 DPGFW 2941
>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P
Query: 1 YCRKMDPGL 9
YC PGL
Sbjct: 225 YCSAQSPGL 233
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 6 DPGLW 10
DPG W
Sbjct: 2950 DPGFW 2954
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 1 YCRKMDPGLW 10
YC DP W
Sbjct: 534 YCPDRDPIAW 543
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 1 YCRKMDPGLW 10
YC DP W
Sbjct: 534 YCPDRDPIAW 543
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 6 DPGLW 10
DPG W
Sbjct: 143 DPGTW 147
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 CRKMDP 7
CR+ DP
Sbjct: 2031 CRRFDP 2036
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 CRKMDP 7
CR+ DP
Sbjct: 2031 CRRFDP 2036
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 CRKMDP 7
CR+ DP
Sbjct: 2031 CRRFDP 2036
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 CRKMDP 7
CR+ DP
Sbjct: 2031 CRRFDP 2036
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 CRKMDP 7
CR+ DP
Sbjct: 2031 CRRFDP 2036
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 CRKMDP 7
CR+ DP
Sbjct: 2031 CRRFDP 2036
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 CRKMDP 7
CR+ DP
Sbjct: 2031 CRRFDP 2036
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 CRKMDP 7
CR+ DP
Sbjct: 2031 CRRFDP 2036
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 CRKMDP 7
CR+ DP
Sbjct: 2031 CRRFDP 2036
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 1 YCRKMDPGL 9
Y RK+ PG
Sbjct: 322 YLRKLVPGF 330
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 3 RKMDPGLW 10
RKM G W
Sbjct: 411 RKMSIGQW 418
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 1 YCRKMDPGLW 10
+C K D +W
Sbjct: 134 WCSKSDDQIW 143
>sp|V073_ORFSA|PROTEIN ORFV073|Orf virus (strain Goat/Texas/SA00/2000) (OV-SA00)
Query: 1 YCRKMDPGL 9
Y R +DP L
Sbjct: 71 YVRSLDPRL 79
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 KMDPGL 9
MDPGL
Sbjct: 316 SMDPGL 321
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 KMDPGL 9
MDPGL
Sbjct: 316 SMDPGL 321
147|SequenceR|740|731|SQPARYCRKM
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 1 SQPARYCR 8
S PARY R
Sbjct: 348 SAPARYIR 355
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 SQPARYCRKM 10
++PA Y RKM
Sbjct: 2422 AKPALYERKM 2431
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 SQPARYCRKM 10
++PA Y RKM
Sbjct: 2422 AKPALYERKM 2431
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 SQPARYCRKM 10
++PA Y RKM
Sbjct: 2422 AKPALYERKM 2431
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 SQPARYCRKM 10
++PA Y RKM
Sbjct: 2422 AKPALYERKM 2431
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 YCRKM 10
YCRKM
Sbjct: 606 YCRKM 610
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 YCRKM 10
YCRKM
Sbjct: 606 YCRKM 610
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 QPARYCRKM 10
+PA Y RKM
Sbjct: 2424 KPALYERKM 2432
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 QPARYCRKM 10
+PA Y RKM
Sbjct: 2423 KPALYERKM 2431
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 4 ARYCRK 9
A YCRK
Sbjct: 1190 AHYCRK 1195
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 4 ARYCRK 9
A YCRK
Sbjct: 1183 AHYCRK 1188
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 4 ARYCRK 9
A YCRK
Sbjct: 1194 AHYCRK 1199
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 4 ARYCRK 9
A YCRK
Sbjct: 1183 AHYCRK 1188
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 4 ARYCRK 9
A YCRK
Sbjct: 1184 AHYCRK 1189
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 4 ARYCRK 9
A YCRK
Sbjct: 1192 AHYCRK 1197
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 4 ARYCRK 9
A YCRK
Sbjct: 1195 AHYCRK 1200
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 3 PARYCR 8
PAR CR
Sbjct: 166 PARGCR 171
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 4 ARYCRK 9
A YCRK
Sbjct: 1182 AHYCRK 1187
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 4 ARYCRK 9
A YCRK
Sbjct: 1193 AHYCRK 1198
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 4 ARYCRK 9
A YCRK
Sbjct: 1184 AHYCRK 1189
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SQPARYCRKM 10
S+ RY R+M
Sbjct: 445 SESVRYTRRM 454
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 4 ARYCRK 9
A YCRK
Sbjct: 1184 AHYCRK 1189
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 4 ARYCRK 9
A YCRK
Sbjct: 1186 AHYCRK 1191
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 4 ARYCRK 9
A YCRK
Sbjct: 1202 AHYCRK 1207
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 4 ARYCRK 9
A YCRK
Sbjct: 1192 AHYCRK 1197
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 4 ARYCRK 9
A YCRK
Sbjct: 1181 AHYCRK 1186
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 QPARYCRK 9
QP+RY R+
Sbjct: 407 QPSRYLRR 414
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 QPARYCRK 9
QP+RY R+
Sbjct: 407 QPSRYLRR 414
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 4 ARYCRK 9
A YCRK
Sbjct: 1200 AHYCRK 1205
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 6 YCRKM 10
YCRK+
Sbjct: 3145 YCRKL 3149
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 6 YCRKM 10
YCRK+
Sbjct: 3145 YCRKL 3149
>sp|UL10_HCMVM|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SQPARYCRK 9
S P YCR+
Sbjct: 115 SDPRNYCRR 123
>sp|UL10_HCMVA|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SQPARYCRK 9
S P YCR+
Sbjct: 115 SDPKNYCRR 123
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 4 ARYCRK 9
A YCRK
Sbjct: 1182 AHYCRK 1187
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 6 YCRKM 10
YCRK+
Sbjct: 3183 YCRKI 3187
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 6 YCRKM 10
YCRK+
Sbjct: 3203 YCRKI 3207
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 6 YCRKM 10
YCRK+
Sbjct: 3233 YCRKI 3237
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 6 YCRKM 10
YCRK+
Sbjct: 3183 YCRKI 3187
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 6 YCRKM 10
YCRK+
Sbjct: 3203 YCRKI 3207
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 6 YCRKM 10
YCRK+
Sbjct: 3233 YCRKI 3237
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 SQPARYCRKM 10
S+ YCRK+
Sbjct: 1821 SEVYMYCRKI 1830
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 4 ARYCRK 9
AR+CR+
Sbjct: 314 ARFCRQ 319
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 3 PARYCR 8
PAR CR
Sbjct: 6 PARGCR 11
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 4 ARYCRK 9
AR+CR+
Sbjct: 330 ARFCRQ 335
148|SequenceR|745|736|TTTSTSQPAR
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 5 TSQPAR 10
TSQPAR
Sbjct: 521 TSQPAR 526
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 5 TSQPAR 10
TSQPAR
Sbjct: 521 TSQPAR 526
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 TTSTSQPAR 10
TTST++P R
Sbjct: 876 TTSTTKPQR 884
149|SequenceR|750|741|MTSALTTTST
***** No hits found ******
150|SequenceR|755|746|PVTRTMTSAL
***** No hits found ******
151|SequenceR|760|751|ARTTAPVTRT
>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)
Query: 1 ARTTAPVTR 9
+++T PVTR
Sbjct: 205 SKSTKPVTR 213
>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 ARTTAPVTR 9
+++T PVTR
Sbjct: 205 SKSTKPVTR 213
>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /
Query: 1 ARTTAPVTR 9
+++T PVTR
Sbjct: 205 SKSTKPVTR 213
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 2 RTTAPVTRT 10
R APVTR
Sbjct: 316 RAAAPVTRN 324
152|SequenceR|765|756|VTTGPARTTA
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 4 GPARTTA 10
GP RTTA
Sbjct: 552 GPERTTA 558
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 4 GPARTTA 10
GP RTTA
Sbjct: 552 GPERTTA 558
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 2 TTGPARTTA 10
TT PA+TT+
Sbjct: 402 TTQPAKTTS 410
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 TGPART 8
TGP+RT
Sbjct: 458 TGPSRT 463
>sp|E1BS_ADE04|E1B protein, small T-antigen|Human adenovirus E serotype 4
Query: 3 TGPARTT 9
T P RTT
Sbjct: 84 TTPGRTT 90
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 2 TTGPAR 7
TTGP R
Sbjct: 631 TTGPKR 636
153|SequenceR|770|761|YTSRHVTTGP
>sp|PG087_MONPV|LATE transcription elongation factor OPG087|Monkeypox virus (MPXV)
Query: 1 YTSRHVTT 8
YT+ H+TT
Sbjct: 160 YTTSHITT 167
>sp|PG087_VARV|LATE transcription elongation factor OPG087|Variola virus
Query: 1 YTSRHVTT 8
YT+ H+TT
Sbjct: 160 YTTSHITT 167
>sp|PG087_VAR67|LATE transcription elongation factor OPG087|Variola virus (isolate
Query: 1 YTSRHVTT 8
YT+ H+TT
Sbjct: 160 YTTSHITT 167
>sp|PG087_VACCC|LATE transcription elongation factor OPG087|Vaccinia virus (strain
Query: 1 YTSRHVTT 8
YT+ H+TT
Sbjct: 160 YTTSHITT 167
>sp|ORF24_TTVV6|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 2 TSRHVTTGP 10
+SRH T GP
Sbjct: 134 SSRHQTRGP 142
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 RHVTTGP 10
RH+ TGP
Sbjct: 289 RHLKTGP 295
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 RHVTTGP 10
RH+ TGP
Sbjct: 289 RHLKTGP 295
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 1 YTSRHVTT 8
YT +HV++
Sbjct: 512 YTDKHVSS 519
>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)
Query: 1 YTSRHVTT 8
YT +H+ T
Sbjct: 131 YTKKHIET 138
>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YTSRHVTT 8
YT +H+ T
Sbjct: 131 YTKKHIET 138
>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant
Query: 1 YTSRHVTT 8
YT +H+ T
Sbjct: 131 YTKKHIET 138
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 1 YTSRHVTTG 9
+TSR+V TG
Sbjct: 312 HTSRYVCTG 320
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 1 YTSRHVTTG 9
Y S HV TG
Sbjct: 434 YNSSHVRTG 442
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 YTSRHVTTG 9
Y S HV TG
Sbjct: 434 YNSSHVRTG 442
>sp|BZLF1_EBVB9|LYTIC switch protein BZLF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 TSRHVTTGP 10
T+ HV+T P
Sbjct: 62 TAYHVSTAP 70
154|SequenceR|775|766|TSHNQYTSRH
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 TSHNQYTSRH 10
TSH +T++H
Sbjct: 435 TSHGSFTTKH 444
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 TSHNQYTSRH 10
+SH Q T++H
Sbjct: 435 SSHEQITAKH 444
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 HNQYTSR 9
HNQ T+R
Sbjct: 2320 HNQSTAR 2326
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 3 HNQYTS 8
HNQY S
Sbjct: 401 HNQYPS 406
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 3 HNQYTSR 9
HNQ T+R
Sbjct: 2298 HNQSTAR 2304
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 3 HNQYTSR 9
HNQ T+R
Sbjct: 2293 HNQSTAR 2299
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 TSHNQYT 7
TSH +YT
Sbjct: 134 TSHERYT 140
>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 SHNQYTSR 9
S N YTSR
Sbjct: 438 SGNDYTSR 445
155|SequenceR|780|771|LSPTETSHNQ
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LSPTETSHNQ 10
L P TSHNQ
Sbjct: 180 LQPMYTSHNQ 189
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 1 LSPTETSHNQ 10
L P TSHNQ
Sbjct: 180 LQPMYTSHNQ 189
>sp|TRX2_VZVD|TRIPLEX capsid protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LSPTETSHNQ 10
LSP ETS Q
Sbjct: 15 LSPAETSALQ 24
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 1 LSPTETSHNQ 10
+ PT++ HN+
Sbjct: 470 IEPTDSDHNE 479
>sp|VL2_HPV03|MINOR capsid protein L2|Human papillomavirus 3
Query: 1 LSPTETSH 8
LSP +T+H
Sbjct: 428 LSPVDTTH 435
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 LSPTETSH 8
++PT+ SH
Sbjct: 2507 VNPTDASH 2514
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 LSPTETSH 8
++PT+ SH
Sbjct: 2527 VNPTDASH 2534
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 LSPTETSH 8
++PT+ SH
Sbjct: 2557 VNPTDASH 2564
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 LSPTETSH 8
++PT+ SH
Sbjct: 2507 VNPTDASH 2514
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 LSPTETSH 8
++PT+ SH
Sbjct: 2527 VNPTDASH 2534
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 LSPTETSH 8
++PT+ SH
Sbjct: 2557 VNPTDASH 2564
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 2 SPTETSHN 9
+ ETSHN
Sbjct: 536 TAVETSHN 543
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 1 LSPTET 6
LSPTET
Sbjct: 10 LSPTET 15
>sp|VL2_HPV10|MINOR capsid protein L2|Human papillomavirus type 10
Query: 1 LSPTETSH 8
LSP +T+H
Sbjct: 425 LSPADTTH 432
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 SPTETSH 8
+PT+T H
Sbjct: 579 TPTDTGH 585
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 SPTETSH 8
+PT+T H
Sbjct: 594 NPTDTGH 600
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 SPTETSH 8
+PT+T H
Sbjct: 594 NPTDTDH 600
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 SPTETSH 8
+PT+T H
Sbjct: 594 NPTDTGH 600
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 SPTETSH 8
+PT+T H
Sbjct: 594 NPTDTGH 600
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 SPTETSH 8
+PT+T H
Sbjct: 594 NPTDTGH 600
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 SPTETSH 8
+PT+T H
Sbjct: 594 NPTDTGH 600
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 SPTETSH 8
+PT+T H
Sbjct: 594 NPTDTGH 600
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 SPTETSH 8
+PT+T H
Sbjct: 594 NPTDTGH 600
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 SPTETSH 8
+PT+T H
Sbjct: 594 NPTDTGH 600
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 SPTETSH 8
+PT+T H
Sbjct: 601 NPTDTGH 607
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 2 SPTETSH 8
+PT+T H
Sbjct: 594 NPTDTGH 600
>sp|PAX_I80A2|PROTEIN PA-X|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 SPTETSH 8
SPT+ SH
Sbjct: 214 SPTKVSH 220
>sp|VL2_HPV32|MINOR capsid protein L2|Human papillomavirus type 32
Query: 3 PTETSHN 9
PT+TSH
Sbjct: 121 PTDTSHG 127
>sp|PHOSP_PI3H4|PHOSPHOPROTEIN parainfluenza 3 virus (strain
Query: 1 LSPTETSH 8
+ PTETS
Sbjct: 66 IKPTETSE 73
156|SequenceR|785|776|PVAATLSPTE
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 PVAATLSPT 9
P TLSPT
Sbjct: 1159 PKKTTLSPT 1167
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 PVAATLSPT 9
P TLSPT
Sbjct: 1159 PKKTTLSPT 1167
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 PVAATLSPTE 10
P ATL PTE
Sbjct: 379 PPKATLPPTE 388
157|SequenceR|790|781|VSVSSPVAAT
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VSVSSPVAAT 10
VSVSSP A T
Sbjct: 1475 VSVSSPDAVT 1484
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VSVSSPVAAT 10
VSVSSP A T
Sbjct: 1451 VSVSSPDAVT 1460
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 VSVSSPVAAT 10
VSVSSP A T
Sbjct: 1475 VSVSSPDAVT 1484
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 VSVSSPVAAT 10
VSVSSP A T
Sbjct: 1451 VSVSSPDAVT 1460
>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)
Query: 1 VSVSSPVAAT 10
+++S+P AAT
Sbjct: 127 ITMSTPYAAT 136
>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)
Query: 1 VSVSSPVAAT 10
+++S+P AAT
Sbjct: 127 ITMSTPYAAT 136
158|SequenceR|795|786|SPARPVSVSS
>sp|PHOSP_MUMPM|PHOSPHOPROTEIN virus genotype B (strain
Query: 1 SPARPVSVSS 10
S ARP+ VSS
Sbjct: 74 SGARPIIVSS 83
>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|V_MUMPM|NON-STRUCTURAL protein V|Mumps virus genotype B (strain
Query: 1 SPARPVSVSS 10
S ARP+ VSS
Sbjct: 74 SGARPIIVSS 83
>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 4 RPVSVSS 10
RPV +SS
Sbjct: 707 RPVGISS 713
159|SequenceR|800|791|TSPSISPARP
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 TSPSISPA 8
TSPS+SPA
Sbjct: 244 TSPSVSPA 251
>sp|VE2_HPV38|REGULATORY protein E2|Human papillomavirus 38
Query: 2 SPSISPARP 10
S S+SP RP
Sbjct: 221 STSVSPERP 229
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 TSPSISPARP 10
TSP++SP P
Sbjct: 396 TSPAVSPVCP 405
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 TSPSISPARP 10
TSP++SP P
Sbjct: 396 TSPAVSPVCP 405
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 TSPSISPARP 10
TSP++SP P
Sbjct: 396 TSPAVSPVCP 405
>sp|NP03_HHV1F|NUCLEAR phosphoprotein UL3|Human herpesvirus 1 (strain F)
Query: 1 TSPSISPAR 9
T+PS SP R
Sbjct: 74 TAPSFSPTR 82
>sp|NP03_HHV11|NUCLEAR phosphoprotein UL3|Human herpesvirus 1 (strain 17)
Query: 1 TSPSISPAR 9
T+PS SP R
Sbjct: 74 TAPSFSPTR 82
>sp|PG130_MONPV|39KDA core protein OPG130|Monkeypox virus (MPXV)
Query: 1 TSPSISPARP 10
T+P+++P +P
Sbjct: 182 TTPTVTPLQP 191
>sp|VL2_HPV39|MINOR capsid protein L2|Human papillomavirus 39
Query: 5 ISPARP 10
+SPARP
Sbjct: 84 VSPARP 89
>sp|VL2_HPVME|MINOR capsid protein L2|Human papillomavirus type ME180
Query: 5 ISPARP 10
+SPARP
Sbjct: 84 VSPARP 89
>sp|VU84_HHV6U|PROTEIN U84|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TSPSISPARP 10
TSP SP P
Sbjct: 164 TSPPYSPCSP 173
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 TSPSISPARP 10
TSP +P RP
Sbjct: 1037 TSPRRAPTRP 1046
160|SequenceR|805|796|TAPSLTSPSI
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 TAPSLTSPSI 10
TAP+L SP+I
Sbjct: 64 TAPTLNSPNI 73
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 TAPSLTSPSI 10
TAP+L SP+I
Sbjct: 64 TAPTLNSPNI 73
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 TAPSLTSPSI 10
TAP+L SP++
Sbjct: 64 TAPALNSPNV 73
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 TAPSLTSPSI 10
TAP+L SP++
Sbjct: 64 TAPALNSPNV 73
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 TAPSLTSPSI 10
TAP+L SP++
Sbjct: 64 TAPALNSPNV 73
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 TAPSLTSPSI 10
TAP L SP+I
Sbjct: 64 TAPMLNSPNI 73
>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19
Query: 1 TAPSLTSPSI 10
TAP +T P +
Sbjct: 19 TAPQVTEPPL 28
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 TAPSLTSPSI 10
+AP+L SP++
Sbjct: 64 SAPALNSPNV 73
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 TAPSLTSPSI 10
T PSL+ P I
Sbjct: 476 TVPSLSFPQI 485
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 TAPSLTSPSI 10
T PSL+ P I
Sbjct: 477 TVPSLSFPQI 486
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 TAPSLTSPSI 10
T P+L SPS+
Sbjct: 62 TNPALMSPSV 71
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 TAPSLTSPS 9
T P+L SPS
Sbjct: 64 TLPALNSPS 72
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 APSLTSPSI 10
AP+L SP++
Sbjct: 65 APALNSPNV 73
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 APSLTSPSI 10
AP+L SP++
Sbjct: 65 APALNSPNV 73
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 TAPSLTSPS 9
T P+L SPS
Sbjct: 64 TLPALNSPS 72
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 TAPSLTSPSI 10
T+P L SP+I
Sbjct: 64 TSPMLNSPNI 73
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 TAPSLTSPSI 10
T P+L SP++
Sbjct: 64 TLPALNSPTV 73
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 TAPSLTSPSI 10
T P+L SP++
Sbjct: 64 TLPALNSPTV 73
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 TAPSLTSP 8
T PSL SP
Sbjct: 1645 TVPSLVSP 1652
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 TAPSLTSP 8
T PSL SP
Sbjct: 1646 TVPSLVSP 1653
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 TAPSLTSP 8
T PSL SP
Sbjct: 1646 TVPSLVSP 1653
>sp|GC_HHV1K|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain KOS)
Query: 1 TAPSLTSPSI 10
+AP+LT P +
Sbjct: 194 SAPNLTDPHV 203
>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)
Query: 1 TAPSLTSPSI 10
+AP+LT P +
Sbjct: 194 SAPNLTDPHV 203
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 PSLTSPSI 10
P+L SPS+
Sbjct: 66 PTLQSPSV 73
>sp|GLYC_HRSV7|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 1 TAPSLTSPS 9
T P+LT+PS
Sbjct: 113 TTPALTTPS 121
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 PSLTSPSI 10
P+L SPS+
Sbjct: 66 PTLQSPSV 73
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 PSLTSPSI 10
P+L SPS+
Sbjct: 66 PTLQSPSV 73
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 APSLTSPS 9
AP+LT+P
Sbjct: 455 APTLTTPE 462
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 APSLTSPS 9
AP+LT+P
Sbjct: 455 APTLTTPE 462
161|SequenceR|810|801|QSHNSTAPSL
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 1 QSHNSTAPS 9
QS+N TAP+
Sbjct: 79 QSYNGTAPN 87
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 1 QSHNSTAPS 9
QS+N TAP+
Sbjct: 79 QSYNGTAPN 87
>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 QSHNSTAPSL 10
Q+H S PSL
Sbjct: 139 QAHKSKVPSL 148
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 1 QSHNSTAPS 9
QS+N TAP+
Sbjct: 79 QSYNGTAPN 87
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 QSHNSTAPS 9
QS+N TAP+
Sbjct: 79 QSYNGTAPN 87
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 1 QSHNSTAPS 9
QS+N TAP+
Sbjct: 79 QSYNGTAPN 87
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 1 QSHNSTAPS 9
QS+N TAP+
Sbjct: 79 QSYNGTAPN 87
>sp|UL74A_HCMVM|UNCHARACTERIZED protein UL74A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QSHNSTA 7
Q+HNST+
Sbjct: 64 QTHNSTS 70
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 1 QSHNSTAPS 9
Q H STAP+
Sbjct: 357 QCHKSTAPN 365
>sp|VIF_HV2BE|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 QSHNSTAPSL 10
Q+H + PSL
Sbjct: 139 QAHKAQVPSL 148
>sp|VIF_HV2D1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 QSHNSTAPSL 10
Q+H + PSL
Sbjct: 139 QAHKAQVPSL 148
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 QSHNSTAPSL 10
++H S PSL
Sbjct: 139 RAHRSQVPSL 148
>sp|VIF_HV2NZ|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 QSHNSTAPSL 10
++H S PSL
Sbjct: 139 RAHRSQVPSL 148
>sp|MATRX_MEASY|MATRIX protein|Measles virus (strain Yamagata-1) (MeV)
Query: 3 HNSTAPSL 10
HN+T P+L
Sbjct: 64 HNNTPPTL 71
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 QSHNSTAPSL 10
++H S AP+L
Sbjct: 1239 KNHTSIAPNL 1248
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 QSHNSTAPSL 10
++H S AP+L
Sbjct: 1239 KNHTSIAPNL 1248
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 SHNSTAP 8
SH ST P
Sbjct: 320 SHKSTVP 326
162|SequenceR|815|806|ENAYHQSHNS
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 NAYHQSHN 9
N Y +SHN
Sbjct: 410 NGYRRSHN 417
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 NAYHQSHN 9
N Y +SHN
Sbjct: 410 NGYRRSHN 417
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 NAYHQSHN 9
N Y +SHN
Sbjct: 410 NGYRRSHN 417
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 ENAYHQSHN 9
E+AY Q H+
Sbjct: 219 EDAYDQVHD 227
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 ENAYHQSHN 9
E+AY Q H+
Sbjct: 219 EDAYDQVHD 227
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 YHQSH 8
YHQ H
Sbjct: 4609 YHQKH 4613
>sp|UL38_HHV6H|APOPTOSIS inhibitor U19|Human herpesvirus 6B (HHV-6 variant
Query: 1 ENAYHQS 7
ENA H+S
Sbjct: 378 ENAVHES 384
163|SequenceR|820|811|GMKSDENAYH
>sp|UL38_HHV6H|APOPTOSIS inhibitor U19|Human herpesvirus 6B (HHV-6 variant
Query: 2 MKSDENAYH 10
+KS ENA H
Sbjct: 374 LKSPENAVH 382
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 MKSDENAYH 10
+ D+NA+H
Sbjct: 209 LNGDKNAFH 217
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 2 MKSDENAYH 10
+ D+NA+H
Sbjct: 209 LNGDKNAFH 217
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 4 SDENAYH 10
SDE YH
Sbjct: 322 SDEGTYH 328
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 SDENAYH 10
SDE YH
Sbjct: 322 SDEGTYH 328
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 4 SDENAYH 10
SDE YH
Sbjct: 322 SDEGTYH 328
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 2 MKSDENAYH 10
++ DE AYH
Sbjct: 330 LQEDEIAYH 338
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 4 SDENAY 9
SDENA+
Sbjct: 1877 SDENAF 1882
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 MKSDENAYH 10
+KS +AYH
Sbjct: 462 LKSVNDAYH 470
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 MKSDENAYH 10
+KS +AYH
Sbjct: 462 LKSVNDAYH 470
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 MKSDENAYH 10
+KS +AYH
Sbjct: 462 LKSVNDAYH 470
>sp|NSP2_ROTJ1|NON-STRUCTURAL protein 2|Rotavirus X (strain
Query: 2 MKSDEN 7
MKSD+N
Sbjct: 292 MKSDKN 297
164|SequenceR|825|816|ATVTSGMKSD
>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain
Query: 1 ATVTSGMKS 9
A VTS MKS
Sbjct: 386 AIVTSKMKS 394
>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus
Query: 1 ATVTSGMKS 9
A VTS MKS
Sbjct: 387 AIVTSKMKS 395
>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate
Query: 1 ATVTSGMKS 9
A VTS MKS
Sbjct: 387 AIVTSKMKS 395
>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 ATVTSGMKS 9
A VTS MKS
Sbjct: 387 AIVTSKMKS 395
>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)
Query: 1 ATVTSGMKS 9
A VTS MKS
Sbjct: 387 AIVTSKMKS 395
>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 ATVTSGMKS 9
A VTS MKS
Sbjct: 387 AIVTSKMKS 395
>sp|ETF1_MONPV|EARLY transcription factor 70 kDa|Monkeypox virus (MPXV)
Query: 1 ATVTSGMKS 9
A VTS MKS
Sbjct: 387 AIVTSKMKS 395
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 1 ATVTSGMKS 9
A VTS MKS
Sbjct: 386 AIVTSKMKS 394
>sp|YVBE_VACCC|UNCHARACTERIZED 10.5 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 TVTSGM 7
TVTSGM
Sbjct: 30 TVTSGM 35
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 ATVTSGMK 8
A +TSG+K
Sbjct: 4802 AAITSGIK 4809
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 ATVTSGMK 8
A +TSG+K
Sbjct: 4822 AAITSGIK 4829
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 ATVTSGMK 8
A +TSG+K
Sbjct: 4852 AAITSGIK 4859
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 ATVTSGMK 8
A +TSG+K
Sbjct: 4764 AAITSGVK 4771
165|SequenceR|830|821|IGIVAATVTS
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 4 VAATVTS 10
VAATVT+
Sbjct: 797 VAATVTT 803
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 4 VAATVTS 10
VAATVT+
Sbjct: 838 VAATVTT 844
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 4 VAATVTS 10
VAATVT+
Sbjct: 838 VAATVTT 844
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 4 VAATVTS 10
VAATVT+
Sbjct: 833 VAATVTT 839
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 4 VAATVTS 10
VAATVT+
Sbjct: 833 VAATVTT 839
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 4 VAATVTS 10
VAATVT+
Sbjct: 833 VAATVTT 839
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 4 VAATVTS 10
VAATVT+
Sbjct: 833 VAATVTT 839
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 4 VAATVTS 10
VAATVT+
Sbjct: 797 VAATVTT 803
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 IGIVAATVTS 10
IG+V AT+ +
Sbjct: 1236 IGLVLATIVA 1245
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 IGIVAATVTS 10
IG+V AT+ +
Sbjct: 1236 IGLVLATIVA 1245
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 IGIVAATVTS 10
IG+V AT+ +
Sbjct: 1235 IGLVLATIVA 1244
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 IGIVAATVTS 10
IG+V AT+ +
Sbjct: 1235 IGLVLATIVA 1244
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 IGIVAATVTS 10
I IVA T+TS
Sbjct: 1322 IPIVALTLTS 1331
166|SequenceR|835|826|VIPVIIGIVA
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 1 VIPVIIGIV 9
V+PV IG++
Sbjct: 730 VVPVTIGVL 738
>sp|PG181_VACCC|PROTEIN OPG181|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VIPVIIGI 8
VIPVII I
Sbjct: 107 VIPVIISI 114
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 PVIIGIVA 10
PV+ GIVA
Sbjct: 2414 PVVDGIVA 2421
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 VIIGIVA 10
VIIGI+A
Sbjct: 675 VIIGIIA 681
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 VIPVIIGIV 9
V+PV +G++
Sbjct: 738 VVPVTLGVL 746
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 VIPVIIGIV 9
V+PV +G++
Sbjct: 738 VVPVTLGVL 746
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 1 VIPVIIGIV 9
V+ V+IG+V
Sbjct: 92 VVKVVIGLV 100
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 2 IPVIIGIVA 10
+P ++GI+A
Sbjct: 860 LPHLVGIIA 868
>sp|VP11_CTFVL|UNCHARACTERIZED protein VP11|Colorado tick fever virus (strain
Query: 1 VIPVIIGI 8
+IP IIGI
Sbjct: 42 LIPQIIGI 49
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 IPVIIG 7
+PV+IG
Sbjct: 4950 VPVVIG 4955
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 IPVIIG 7
+PV+IG
Sbjct: 5038 VPVVIG 5043
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 IPVIIG 7
+PV+IG
Sbjct: 4988 VPVVIG 4993
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 IPVIIG 7
+PV+IG
Sbjct: 5008 VPVVIG 5013
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 VIPVIIG 7
++PVI+G
Sbjct: 408 LVPVILG 414
>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VIPVIIGIVA 10
V+ VIIG+++
Sbjct: 562 VVAVIIGVIS 571
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 IPVIIGIVA 10
+ +++GIVA
Sbjct: 673 VMIVVGIVA 681
>sp|PG181_VACCA|PROTEIN OPG181|Vaccinia virus (strain Ankara) (VACV)
Query: 2 IPVIIGI 8
IPVII I
Sbjct: 104 IPVIISI 110
>sp|PG181_MONPV|PROTEIN OPG181|Monkeypox virus (MPXV)
Query: 2 IPVIIGI 8
IPVII I
Sbjct: 108 IPVIISI 114
>sp|G7_VARV|ASSEMBLY protein G7|Variola virus
Query: 1 VIPVIIG 7
++P+IIG
Sbjct: 174 ILPMIIG 180
>sp|G7_VAR67|ASSEMBLY protein G7|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 VIPVIIG 7
++P+IIG
Sbjct: 174 ILPMIIG 180
>sp|G7_VACCA|ASSEMBLY protein G7|Vaccinia virus (strain Ankara) (VACV)
Query: 1 VIPVIIG 7
++P+IIG
Sbjct: 174 ILPMIIG 180
167|SequenceR|840|831|LLAIVVIPVI
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 LAIVVIPVI 10
L++V+IP++
Sbjct: 290 LSLVIIPLV 298
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 LAIVVIPVI 10
LA+ V PVI
Sbjct: 972 LAVAVEPVI 980
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 LAIVVIPVI 10
LA+ V PVI
Sbjct: 971 LAVAVEPVI 979
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 LAIVVIPVI 10
LA+ V PVI
Sbjct: 972 LAVAVEPVI 980
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 LAIVVIPVI 10
LA+ V PVI
Sbjct: 972 LAVAVEPVI 980
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LLAIVVIPV 9
+LA+V++P+
Sbjct: 5 VLAVVILPL 13
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LLAIVVIPV 9
+LA+V++P+
Sbjct: 5 VLAVVILPL 13
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 LLAIVVIPV 9
+LAIV+I +
Sbjct: 822 MLAIVIITI 830
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 LAIVVIPVI 10
LAI V PV+
Sbjct: 971 LAIAVEPVV 979
168|SequenceR|845|836|YGSMCLLAIV
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 SMCLLAIV 10
+MCLLA V
Sbjct: 280 TMCLLANV 287
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 SMCLLAIV 10
+MCLLA V
Sbjct: 280 TMCLLANV 287
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 SMCLLAIV 10
+MCLLA V
Sbjct: 279 TMCLLANV 286
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 SMCLLAIV 10
+MCLLA V
Sbjct: 279 TMCLLANV 286
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 SMCLLAIV 10
+MCLLA V
Sbjct: 280 TMCLLANV 287
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 SMCLLAIV 10
+MCLLA V
Sbjct: 280 TMCLLANV 287
>sp|PG115_VACCT|CORE protein OPG115|Vaccinia virus (strain Tian Tan)
Query: 1 YGSMCL 6
YGS+C+
Sbjct: 55 YGSLCV 60
>sp|PG115_VACCC|CORE protein OPG115|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YGSMCL 6
YGS+C+
Sbjct: 55 YGSLCV 60
>sp|PG115_VACCA|CORE protein OPG115|Vaccinia virus (strain Ankara) (VACV)
Query: 1 YGSMCL 6
YGS+C+
Sbjct: 55 YGSLCV 60
>sp|PG115_MONPV|CORE protein OPG115|Monkeypox virus (MPXV)
Query: 1 YGSMCL 6
YGS+C+
Sbjct: 55 YGSLCV 60
>sp|D3_VARV|CORE protein D3|Variola virus
Query: 1 YGSMCL 6
YGS+C+
Sbjct: 55 YGSLCV 60
>sp|D3_VAR67|CORE protein D3|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 YGSMCL 6
YGS+C+
Sbjct: 55 YGSLCV 60
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 GSMCLLAIV 10
G+M LLAI+
Sbjct: 1149 GTMLLLAIM 1157
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 1 YGSMCLL 7
YGS CL+
Sbjct: 169 YGSKCLM 175
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 2 GSMCLLAIV 10
GS+C L+++
Sbjct: 226 GSLCFLSLI 234
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 GSMCLLA 8
GSMC+++
Sbjct: 1933 GSMCVIS 1939
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 GSMCLLA 8
GSMC+++
Sbjct: 1933 GSMCVIS 1939
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 GSMCLLA 8
G+MC LA
Sbjct: 209 GTMCRLA 215
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2161 SLCLLA 2166
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2161 SLCLLA 2166
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2160 SLCLLA 2165
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2162 SLCLLA 2167
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2164 SLCLLA 2169
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2164 SLCLLA 2169
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2107 SLCLLA 2112
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2148 SLCLLA 2153
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2148 SLCLLA 2153
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2148 SLCLLA 2153
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2149 SLCLLA 2154
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2149 SLCLLA 2154
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2148 SLCLLA 2153
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2150 SLCLLA 2155
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2148 SLCLLA 2153
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2158 SLCLLA 2163
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2146 SLCLLA 2151
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2151 SLCLLA 2156
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2139 SLCLLA 2144
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2139 SLCLLA 2144
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2140 SLCLLA 2145
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2138 SLCLLA 2143
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2138 SLCLLA 2143
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2140 SLCLLA 2145
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2140 SLCLLA 2145
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2142 SLCLLA 2147
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2137 SLCLLA 2142
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2156 SLCLLA 2161
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2169 SLCLLA 2174
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2161 SLCLLA 2166
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2148 SLCLLA 2153
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 SMCLLA 8
S+CLLA
Sbjct: 2148 SLCLLA 2153
>sp|U131A_HCMVM|PROTEIN UL131A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SMCLLAIV 10
S+CL A+V
Sbjct: 9 SVCLCAVV 16
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YGSMCL 6
YGS CL
Sbjct: 169 YGSKCL 174
169|SequenceR|850|841|NRWILYGSMC
>sp|VP7_ROTAM|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 NRWILYGSMC 10
N+WI GS C
Sbjct: 182 NKWISMGSSC 191
>sp|VP7_ROT41|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 NRWILYGSMC 10
N+WI GS C
Sbjct: 182 NKWISMGSSC 191
>sp|VP7_ROTYO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 NRWILYGSMC 10
N+WI GS C
Sbjct: 182 NKWISMGSSC 191
>sp|VP7_ROTHP|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 NRWILYGSMC 10
N+WI GS C
Sbjct: 182 NKWISMGSSC 191
>sp|VP7_ROTHT|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 NRWILYGSMC 10
N+WI GS C
Sbjct: 182 NKWISMGSSC 191
>sp|VP7_ROTH3|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 NRWILYGSMC 10
N+WI GS C
Sbjct: 182 NKWISMGSSC 191
>sp|VP7_ROTHO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 NRWILYGSMC 10
N+WI GS C
Sbjct: 182 NKWISMGSSC 191
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 RWILYGSM 9
RW+++G M
Sbjct: 2007 RWLIHGGM 2014
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 RWILYGSM 9
RW+++G M
Sbjct: 1998 RWLIHGGM 2005
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 RWILYGSM 9
RW+++G M
Sbjct: 1999 RWLIHGGM 2006
>sp|VP7_ROTHV|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 NRWILYGSMC 10
N+WI GS C
Sbjct: 182 NKWISMGSSC 191
>sp|VP7_ROTHK|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 NRWILYGSMC 10
N+WI GS C
Sbjct: 182 NKWISMGSSC 191
>sp|VP7_ROTAD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 NRWILYGSMC 10
N+WI GS C
Sbjct: 182 NKWISMGSSC 191
>sp|VP7_ROTHJ|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 NRWILYGSMC 10
N+WI GS C
Sbjct: 182 NKWISMGSSC 191
>sp|VP7_ROTHW|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 NRWILYGSMC 10
N+WI GS C
Sbjct: 182 NKWISMGSSC 191
>sp|VP7_ROTH4|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 NRWILYGSMC 10
N+WI GS C
Sbjct: 182 NKWISMGSSC 191
>sp|VP7_ROTHX|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 NRWILYGSMC 10
N+WI GS C
Sbjct: 182 NKWISMGSSC 191
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 2 RWILYGSMC 10
RW++Y +C
Sbjct: 450 RWVMYFFVC 458
>sp|VP7_ROTHM|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 NRWILYGSMC 10
N+WI GS C
Sbjct: 182 NKWISMGSSC 191
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 2 RWILY 6
RWILY
Sbjct: 410 RWILY 414
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 2 RWILY 6
RWI+Y
Sbjct: 444 RWIMY 448
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 WILYGSMC 10
WI YG C
Sbjct: 4360 WIGYGCNC 4367
>sp|UL116_HCMVA|UNCHARACTERIZED protein UL116|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 WILYGSMC 10
W+L+ ++C
Sbjct: 10 WLLFPALC 17
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 WILYGSMC 10
WI YG C
Sbjct: 4360 WIGYGCNC 4367
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 WILYGS 8
W++YG+
Sbjct: 187 WVMYGT 192
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 WILYGS 8
W++YG+
Sbjct: 187 WVMYGT 192
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 WILYGS 8
W++YG+
Sbjct: 187 WVMYGT 192
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 WILYGS 8
W++YG+
Sbjct: 187 WVMYGT 192
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 WILYGS 8
W++YG+
Sbjct: 187 WVMYGT 192
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 2 RWILY 6
RW++Y
Sbjct: 475 RWVMY 479
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 2 RWILY 6
RW++Y
Sbjct: 475 RWVMY 479
>sp|PG115_VACCT|CORE protein OPG115|Vaccinia virus (strain Tian Tan)
Query: 6 YGSMC 10
YGS+C
Sbjct: 55 YGSLC 59
>sp|PG115_VACCC|CORE protein OPG115|Vaccinia virus (strain Copenhagen) (VACV)
Query: 6 YGSMC 10
YGS+C
Sbjct: 55 YGSLC 59
>sp|PG115_VACCA|CORE protein OPG115|Vaccinia virus (strain Ankara) (VACV)
Query: 6 YGSMC 10
YGS+C
Sbjct: 55 YGSLC 59
>sp|PG115_MONPV|CORE protein OPG115|Monkeypox virus (MPXV)
Query: 6 YGSMC 10
YGS+C
Sbjct: 55 YGSLC 59
>sp|D3_VARV|CORE protein D3|Variola virus
Query: 6 YGSMC 10
YGS+C
Sbjct: 55 YGSLC 59
>sp|D3_VAR67|CORE protein D3|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 6 YGSMC 10
YGS+C
Sbjct: 55 YGSLC 59
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 1 NRWILY 6
N W+LY
Sbjct: 83 NTWLLY 88
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 WILYGS 8
W LYGS
Sbjct: 83 WPLYGS 88
>sp|VP7_ROTHC|OUTER capsid glycoprotein VP7|Rotavirus C (isolate RVC/Human/United
Query: 1 NRWILYGSMC 10
N W +GS C
Sbjct: 187 NLWAAFGSDC 196
>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate
Query: 1 NRWILYGSMC 10
N W +GS C
Sbjct: 187 NLWAAFGSDC 196
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 WILYGS 8
W++YG+
Sbjct: 197 WVVYGT 202
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 WILYGS 8
W++YG+
Sbjct: 197 WVVYGT 202
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 WILYGS 8
W++YG+
Sbjct: 197 WVVYGT 202
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 NRWILYGSMC 10
N + YGS C
Sbjct: 751 NLLLQYGSFC 760
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 NRWILYGSMC 10
N + YGS C
Sbjct: 733 NLLLQYGSFC 742
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 2 RWILYGSM 9
RW+ G M
Sbjct: 519 RWVAEGQM 526
>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)
Query: 3 WILYGSM 9
W+ YG M
Sbjct: 89 WVSYGIM 95
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 3 WILYG 7
W+L+G
Sbjct: 514 WVLFG 518
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 3 WILYG 7
W+L+G
Sbjct: 512 WVLFG 516
>sp|CEP1_HHV2H|CYTOPLASMIC envelopment protein 1|Human herpesvirus 2 (strain HG52)
Query: 3 WILYGSMC 10
WIL MC
Sbjct: 191 WILNTLMC 198
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 3 WILYGSMC 10
W+L MC
Sbjct: 72 WLLGNPMC 79
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 3 WILYGSMC 10
W+L MC
Sbjct: 76 WLLGNPMC 83
>sp|DR3_HHV6U|UNCHARACTERIZED protein DR3|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 WILYGSMC 10
W+ G++C
Sbjct: 20 WVCMGAIC 27
170|SequenceR|855|846|NKRKWNRWIL
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 2 KRKWNRW 8
K KW+RW
Sbjct: 247 KLKWDRW 253
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 4 KWNRW 8
KW+RW
Sbjct: 319 KWDRW 323
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 NKRKWNRW 8
N+R WN W
Sbjct: 921 NQRAWNIW 928
>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain
Query: 1 NKRKWNR 7
N+RKW R
Sbjct: 260 NRRKWER 266
>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate
Query: 1 NKRKWNR 7
N+RKW R
Sbjct: 260 NRRKWER 266
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 3 RKWNRWI 9
R +NRWI
Sbjct: 2105 RGYNRWI 2111
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 3 RKWNRWI 9
R +NRWI
Sbjct: 2104 RGYNRWI 2110
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 NKRKWNRW 8
NKR W+ W
Sbjct: 664 NKRTWDFW 671
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 3 RKWNRWI 9
R +NRWI
Sbjct: 2105 RGYNRWI 2111
>sp|MAT_INCJJ|POLYPROTEIN p42|Influenza C virus (strain C/JJ/1950)
Query: 4 KWNRW 8
+W RW
Sbjct: 319 RWERW 323
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 4 KWNRWI 9
++NRWI
Sbjct: 2105 RYNRWI 2110
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 4 KWNRWI 9
++NRWI
Sbjct: 2105 RYNRWI 2110
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 4 KWNRWI 9
++NRWI
Sbjct: 2105 RYNRWI 2110
>sp|MAT_INCAA|POLYPROTEIN p42|Influenza C virus (strain C/Ann
Query: 4 KWNRW 8
+W RW
Sbjct: 319 RWERW 323
>sp|MAT_INCHY|POLYPROTEIN p42|Influenza C virus (strain C/Hyogo/1/1983)
Query: 4 KWNRW 8
+W RW
Sbjct: 319 RWERW 323
>sp|MAT_INCCA|POLYPROTEIN p42|Influenza C virus (strain C/California/1978)
Query: 4 KWNRW 8
+W RW
Sbjct: 319 RWERW 323
>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)
Query: 4 KWNRW 8
+W RW
Sbjct: 319 RWERW 323
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 NKRKWNRW 8
++R WN W
Sbjct: 920 DQRAWNIW 927
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 RKWNRW 8
++WN W
Sbjct: 1081 QRWNLW 1086
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 RKWNRW 8
++WN W
Sbjct: 1081 QRWNLW 1086
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 RKWNRW 8
++WN W
Sbjct: 1080 QRWNLW 1085
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 RKWNRW 8
++WN W
Sbjct: 1080 QRWNLW 1085
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 3 RKWNRWI 9
+ +NRWI
Sbjct: 2104 KGYNRWI 2110
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 NKRKWN 6
NKR WN
Sbjct: 916 NKRVWN 921
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 2 KRKWN 6
K+KWN
Sbjct: 574 KQKWN 578
>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate
Query: 1 NKRKWNRW 8
N K+NRW
Sbjct: 162 NCSKFNRW 169
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 KRKWNRW 8
+R WN W
Sbjct: 922 QRAWNIW 928
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 5 WNRWI 9
+NRWI
Sbjct: 2106 YNRWI 2110
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 2 KRKWN 6
K+KWN
Sbjct: 574 KQKWN 578
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 5 WNRWI 9
+NRWI
Sbjct: 2106 YNRWI 2110
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 5 WNRWI 9
+NRWI
Sbjct: 2106 YNRWI 2110
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 WNRWIL 10
W W+L
Sbjct: 168 WRHWLL 173
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 2 KRKWN 6
K+KWN
Sbjct: 574 KQKWN 578
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 5 WNRWI 9
+NRWI
Sbjct: 2106 YNRWI 2110
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 5 WNRWI 9
+NRWI
Sbjct: 2106 YNRWI 2110
>sp|MATRX_NIPAV|MATRIX protein|Nipah virus
Query: 1 NKRKWNRWI 9
N+RK+N ++
Sbjct: 55 NERKYNNYM 63
>sp|C10_VACCA|PROTEIN C10|Vaccinia virus (strain Ankara) (VACV)
Query: 1 NKRKWNRWI 9
NKR + W+
Sbjct: 84 NKRTCSNWV 92
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 WNRWIL 10
W W+L
Sbjct: 168 WRHWLL 173
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RKWNRW 8
R WN W
Sbjct: 3189 RGWNDW 3194
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RKWNRW 8
R WN W
Sbjct: 3186 RGWNDW 3191
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RKWNRW 8
R WN W
Sbjct: 3189 RGWNDW 3194
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RKWNRW 8
R WN W
Sbjct: 3189 RGWNDW 3194
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 5 WNRWI 9
W +W+
Sbjct: 708 WRKWV 712
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 WNRWIL 10
W W+L
Sbjct: 168 WRHWLL 173
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 RKWNRW 8
R WN W
Sbjct: 921 RAWNVW 926
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 RKWNRW 8
R WN W
Sbjct: 921 RAWNVW 926
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RKWNRW 8
R WN W
Sbjct: 3189 RGWNDW 3194
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RKWNRW 8
R WN W
Sbjct: 3189 RGWNDW 3194
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 RKWNRW 8
R WN W
Sbjct: 3189 RGWNDW 3194
>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 NKRKWNRWI 9
N+RK+N ++
Sbjct: 55 NERKFNNYM 63
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 RKWNRW 8
R WN W
Sbjct: 921 RAWNVW 926
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 RKWNRW 8
R WN W
Sbjct: 921 RAWNVW 926
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 RKWNRW 8
R WN W
Sbjct: 921 RAWNVW 926
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 5 WNRWI 9
W +W+
Sbjct: 712 WRKWV 716
>sp|VPR_HV2D2|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 2 KRKWNRWI 9
+ W WI
Sbjct: 17 REPWEEWI 24
>sp|C10_VAR67|PROTEIN C10|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 NKRKWNRWI 9
NKR + W+
Sbjct: 84 NKRTCSNWV 92
>sp|C10_VACCC|PROTEIN C10|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NKRKWNRWI 9
NKR + W+
Sbjct: 84 NKRTCSNWV 92
>sp|VPR_HV2EH|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 2 KRKWNRWIL 10
+ W +W++
Sbjct: 17 REPWEQWVV 25
171|SequenceR|860|851|NMSKTNKRKW
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 KTNKRKW 10
KTN RKW
Sbjct: 2044 KTNDRKW 2050
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 KTNKRKW 10
KTN RKW
Sbjct: 2044 KTNDRKW 2050
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 4 KTNKRKW 10
KTN RKW
Sbjct: 2044 KTNDRKW 2050
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 4 KTNKRKW 10
KTN RKW
Sbjct: 2044 KTNDRKW 2050
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 4 KTNKRKW 10
KTN RKW
Sbjct: 2044 KTNDRKW 2050
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 4 KTNKRKW 10
KTN RKW
Sbjct: 2044 KTNDRKW 2050
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 4 KTNKRKW 10
KTN RKW
Sbjct: 2044 KTNDRKW 2050
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 4 KTNKRKW 10
KTN RKW
Sbjct: 2044 KTNDRKW 2050
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 4 KTNKRKW 10
KTN RKW
Sbjct: 2044 KTNDRKW 2050
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 352 NMKKTSQLKW 361
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 355 NMKKTSQLKW 364
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 352 NMKKTSQLKW 361
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMKKTSQLKW 368
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMRKTSQLKW 368
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMRKTSQLKW 368
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 NMSKTNKRKW 10
NM KT++ KW
Sbjct: 359 NMRKTSQLKW 368
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 NMSKTNKRKW 10
NM KT + KW
Sbjct: 336 NMKKTGQLKW 345
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 NMSKTNKRKW 10
NM KT + KW
Sbjct: 359 NMKKTGQLKW 368
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 NMSKTNKRKW 10
NM KT + KW
Sbjct: 359 NMKKTGQLKW 368
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 1 NMSKTNKRKW 10
NM KT + KW
Sbjct: 359 NMKKTGQLKW 368
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 NMSKTNKRKW 10
NM KT + KW
Sbjct: 359 NMKKTGQLKW 368
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 MSKTNKRKW 10
+SKT+ RK+
Sbjct: 486 LSKTDSRKY 494
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 1 NMSKTNKRKW 10
NM KT+ KW
Sbjct: 359 NMKKTSPLKW 368
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 NMSKTNKRKW 10
NM KT+ KW
Sbjct: 359 NMKKTSPLKW 368
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 NMSKTNKRKW 10
NM KT+ KW
Sbjct: 359 NMKKTSPLKW 368
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 1 NMSKTNKRKW 10
NM KT+ KW
Sbjct: 359 NMKKTSHLKW 368
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 1 NMSKTNKRKW 10
NM +T++ KW
Sbjct: 359 NMKRTSQLKW 368
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 NMSKTNKRKW 10
N+ KT++ KW
Sbjct: 359 NIKKTSQLKW 368
>sp|GM_HCMVM|ENVELOPE glycoprotein M|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NMSKTNKRKW 10
++ K N R W
Sbjct: 5 HVDKVNTRTW 14
>sp|GM_HCMVA|ENVELOPE glycoprotein M|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NMSKTNKRKW 10
++ K N R W
Sbjct: 5 HVDKVNTRTW 14
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 1 NMSKTNKRK 9
N+SK KRK
Sbjct: 502 NVSKGTKRK 510
172|SequenceR|865|856|VPNDFNMSKT
>sp|SPIKE_ADE07|FIBER protein|Human adenovirus B serotype 7
Query: 1 VPNDFNMSKT 10
V NDFNM T
Sbjct: 196 VSNDFNMLTT 205
>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV
Query: 1 VPNDFNMSK 9
+PND+N+ K
Sbjct: 115 LPNDWNIIK 123
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 1 VPNDFNMSK 9
+PND+N+ K
Sbjct: 115 LPNDWNIIK 123
>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
Query: 1 VPNDFNMSKT 10
+P DFN + T
Sbjct: 511 LPTDFNTTDT 520
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 VPNDFNMS 8
+PND N++
Sbjct: 858 MPNDINLT 865
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 VPNDFNMSK 9
VP+D N S+
Sbjct: 1643 VPSDLNTSE 1651
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 1 VPNDFNMSK 9
+P+ FNM +
Sbjct: 867 IPDTFNMEE 875
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 VPNDFNMSK 9
VP+D N S+
Sbjct: 1643 VPSDLNTSE 1651
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 VPNDFNM 7
VPN +N+
Sbjct: 786 VPNPYNL 792
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 VPNDFNM 7
VPN +N+
Sbjct: 786 VPNPYNL 792
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 VPNDFNM 7
VPN +N+
Sbjct: 786 VPNPYNL 792
>sp|VP30_MABVM|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 PNDFNMSK 9
P+ FN+SK
Sbjct: 62 PSTFNLSK 69
>sp|VP30_MABVA|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 PNDFNMSK 9
P+ FN+SK
Sbjct: 62 PSTFNLSK 69
>sp|VP30_MABVO|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 PNDFNMSK 9
P+ FN+SK
Sbjct: 62 PSTFNLSK 69
173|SequenceR|870|861|TTKRYVPNDF
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TKRYVP 7
TKRY+P
Sbjct: 1265 TKRYLP 1270
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TKRYVP 7
TKRY+P
Sbjct: 1675 TKRYLP 1680
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TKRYVP 7
TKRY+P
Sbjct: 1675 TKRYLP 1680
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TKRYVP 7
TKRY+P
Sbjct: 1675 TKRYLP 1680
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TKRYVP 7
TKRY+P
Sbjct: 1675 TKRYLP 1680
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 TKRYVP 7
TKRY+P
Sbjct: 1675 TKRYLP 1680
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TKRYVP 7
TKRY+P
Sbjct: 1675 TKRYLP 1680
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TKRYVP 7
TKRY+P
Sbjct: 1675 TKRYLP 1680
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 KRYVPND 9
+RY+PN+
Sbjct: 1594 RRYIPNN 1600
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 3 KRYVPND 9
K+Y+P D
Sbjct: 241 KKYIPQD 247
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 3 KRYVPND 9
K+Y+P D
Sbjct: 241 KKYIPQD 247
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 TKRYVP 7
T+RY+P
Sbjct: 1676 TRRYLP 1681
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 TKRYVP 7
T+RY+P
Sbjct: 1675 TRRYLP 1680
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 TKRYVP 7
T+RY+P
Sbjct: 1676 TRRYLP 1681
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 5 YVPNDF 10
Y+P+DF
Sbjct: 47 YIPSDF 52
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 RYVPNDF 10
RYV N+F
Sbjct: 184 RYVDNNF 190
>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TTKRYVPND 9
TT+ +V ND
Sbjct: 219 TTRAFVGND 227
>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TTKRYVPND 9
TT+ +V ND
Sbjct: 219 TTRAFVGND 227
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
Query: 1 TTKRYVP 7
T KR+VP
Sbjct: 420 TIKRFVP 426
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 RYVPNDF 10
RYV N+F
Sbjct: 184 RYVDNNF 190
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 RYVPNDF 10
RYV N+F
Sbjct: 184 RYVDNNF 190
>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 TKRYVPNDF 10
TK+ PN+F
Sbjct: 294 TKKTFPNNF 302
>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 TKRYVPNDF 10
TK+ PN+F
Sbjct: 294 TKKTFPNNF 302
>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 2 TKRYVPNDF 10
TK+ PN+F
Sbjct: 294 TKKTFPNNF 302
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 RYVPNDF 10
RYV N+F
Sbjct: 184 RYVDNNF 190
>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV
Query: 5 YVPNDF 10
Y+PND+
Sbjct: 114 YLPNDW 119
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 5 YVPNDF 10
Y+PND+
Sbjct: 114 YLPNDW 119
174|SequenceR|875|866|EDEEETTKRY
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 2 DEEETTKRY 10
D+ ET+ RY
Sbjct: 154 DDTETSNRY 162
175|SequenceR|880|871|IHLEDEDEEE
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HLEDEDEEE 10
HL+D DEEE
Sbjct: 897 HLKDSDEEE 905
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 HLEDEDEEE 10
HL+D DEEE
Sbjct: 896 HLKDSDEEE 904
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 HLEDEDEEE 10
HL+D DEEE
Sbjct: 897 HLKDSDEEE 905
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 4 EDEDEE 9
EDED+E
Sbjct: 366 EDEDDE 371
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 4 EDEDEE 9
EDED+E
Sbjct: 366 EDEDDE 371
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 LEDEDEEE 10
+E+EDE E
Sbjct: 2260 VEEEDERE 2267
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 DEDEEE 10
D+DEEE
Sbjct: 370 DKDEEE 375
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 3 LEDEDEEE 10
L D DEEE
Sbjct: 877 LRDTDEEE 884
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 3 LEDEDEEE 10
LE EDEE+
Sbjct: 51 LESEDEED 58
>sp|NEF_HV1ET|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 LEDEDEE 9
+EDED E
Sbjct: 174 MEDEDRE 180
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 3 LEDEDEE 9
LED DEE
Sbjct: 505 LEDPDEE 511
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 HLEDED 7
HL+D+D
Sbjct: 1302 HLQDQD 1307
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 3 LEDEDEE 9
LED DEE
Sbjct: 505 LEDPDEE 511
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 LEDEDEE 9
LED DEE
Sbjct: 505 LEDPDEE 511
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 4 EDEDE 8
EDEDE
Sbjct: 34 EDEDE 38
>sp|NEF_HV19N|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 LEDEDEE 9
+EDED E
Sbjct: 174 MEDEDRE 180
>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)
Query: 5 DEDEEE 10
DEDE+E
Sbjct: 110 DEDEKE 115
>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)
Query: 5 DEDEEE 10
DEDE+E
Sbjct: 110 DEDEKE 115
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 HLEDEDE 8
HL D+D+
Sbjct: 1302 HLRDQDQ 1308
>sp|ICP27_EBVG|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 DEDEEE 10
DEDE+E
Sbjct: 110 DEDEKE 115
>sp|NEF_HV1RH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 4 EDEDEE 9
EDEDEE
Sbjct: 62 EDEDEE 67
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 HLEDEDE 8
HL D+D+
Sbjct: 1302 HLRDQDQ 1308
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 4 EDEDEE 9
EDED+E
Sbjct: 624 EDEDKE 629
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 4 EDEDEEE 10
E EDEE+
Sbjct: 618 ESEDEED 624
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 4 EDEDE 8
EDEDE
Sbjct: 34 EDEDE 38
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 HLEDEDE 8
+LE EDE
Sbjct: 1562 YLEQEDE 1568
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 DEDEEE 10
DEDEE+
Sbjct: 359 DEDEEQ 364
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 3 LEDEDEEE 10
+E EDEE+
Sbjct: 51 IESEDEED 58
176|SequenceR|885|876|QATRGIHLED
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 4 RGIHLE 9
RGIHLE
Sbjct: 953 RGIHLE 958
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 4 RGIHLE 9
RGIHLE
Sbjct: 203 RGIHLE 208
>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain
Query: 4 RGIHLE 9
RGIHLE
Sbjct: 203 RGIHLE 208
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 2 ATRGIHLED 10
A+RG ++ED
Sbjct: 117 ASRGTNMED 125
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 2 ATRGIHLED 10
A+RG ++ED
Sbjct: 117 ASRGTNMED 125
>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)
Query: 2 ATRGIHLED 10
A+RG ++ED
Sbjct: 117 ASRGTNMED 125
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 2 ATRGIHLED 10
A+RG ++ED
Sbjct: 117 ASRGTNMED 125
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 2 ATRGIHLED 10
A+RG ++ED
Sbjct: 117 ASRGTNMED 125
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 2 ATRGIHLED 10
A+RG ++ED
Sbjct: 117 ASRGTNMED 125
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 2 ATRGIHLED 10
A+RG ++ED
Sbjct: 117 ASRGTNMED 125
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 2 ATRGIHLED 10
A+RG ++ED
Sbjct: 117 ASRGTNMED 125
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 2 ATRGIHLED 10
A+RG ++ED
Sbjct: 117 ASRGTNMED 125
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 2 ATRGIHLED 10
A+RG ++ED
Sbjct: 117 ASRGTNMED 125
>sp|NCAP_MEASC|NUCLEOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 2 ATRGIHLED 10
A+RG ++ED
Sbjct: 117 ASRGTNMED 125
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 ATRGIHLED 10
ATR HLE+
Sbjct: 278 ATRCTHLEN 286
>sp|YEC4_EBVB9|UNCHARACTERIZED protein EC-RF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QATRGIHL 8
+A RGIH+
Sbjct: 180 KAARGIHV 187
>sp|NCAP_HMPVC|NUCLEOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 RGIHLED 10
+GIHL D
Sbjct: 4 QGIHLSD 10
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 4 RGIHLED 10
RG+ LED
Sbjct: 992 RGVPLED 998
177|SequenceR|890|881|YVHGIQATRG
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 YVHGIQATR 9
Y+H IQA R
Sbjct: 9 YLHRIQAAR 17
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 2 VHGIQATRG 10
+ GI+A RG
Sbjct: 1153 IFGIEAARG 1161
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 VHGIQATRG 10
+ GI+A RG
Sbjct: 1153 IFGIEAARG 1161
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 2 VHGIQATRG 10
+ GI+A RG
Sbjct: 1153 IFGIEAARG 1161
>sp|CAP8_ADE40|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 40
Query: 2 VHGIQATR 9
V+GI+ATR
Sbjct: 44 VNGIRATR 51
>sp|CAP8_ADE41|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 41
Query: 2 VHGIQATR 9
V+GI+ATR
Sbjct: 44 VNGIRATR 51
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 2 VHGIQATRG 10
+ GI+ +RG
Sbjct: 122 IRGIEVSRG 130
>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 VHGIQATRG 10
++G+ TRG
Sbjct: 247 IYGLTETRG 255
178|SequenceR|895|886|SIAAPYVHGI
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 2 IAAPYVHG 9
+A PYVHG
Sbjct: 495 VAPPYVHG 502
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 2 IAAPYVHG 9
+A PYVHG
Sbjct: 496 VAPPYVHG 503
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 AAPYVH 8
APYVH
Sbjct: 1240 GAPYVH 1245
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 SIAAPYV 7
++AAPY+
Sbjct: 245 TVAAPYI 251
>sp|X_HBVE3|PROTEIN X|Hepatitis B virus genotype E
Query: 3 AAPYVHG 9
A P VHG
Sbjct: 44 AVPAVHG 50
179|SequenceR|900|891|PRDFSSIAAP
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 RDFSSIA 8
RDF SIA
Sbjct: 334 RDFCSIA 340
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 RDFSSIA 8
RDF SIA
Sbjct: 334 RDFCSIA 340
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 2 RDFSSIA 8
RDF SIA
Sbjct: 334 RDFCSIA 340
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 2 RDFSSIA 8
RDF SIA
Sbjct: 334 RDFCSIA 340
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 PRDFSSIAAP 10
P +FSS A+P
Sbjct: 301 PLNFSSGASP 310
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 1 PRDFSSIAAP 10
P DF + A+P
Sbjct: 629 PADFRASASP 638
180|SequenceR|905|896|PEAWLPRDFS
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 EAWLPR 7
EAW+PR
Sbjct: 818 EAWIPR 823
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 EAWLPR 7
EAW+PR
Sbjct: 818 EAWIPR 823
>sp|NSP2_ROTJ1|NON-STRUCTURAL protein 2|Rotavirus X (strain
Query: 2 EAWLPRD 8
E W+P D
Sbjct: 17 EGWIPSD 23
>sp|NSP2_ROTB2|NON-STRUCTURAL protein 2|Rotavirus X (isolate
Query: 2 EAWLPRD 8
E W+P D
Sbjct: 17 EGWIPSD 23
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 2 EAWLPRD 8
+AW PRD
Sbjct: 333 QAWTPRD 339
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 2 EAWLPRD 8
+AW PRD
Sbjct: 333 QAWTPRD 339
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 3 AWLPRD 8
AWL RD
Sbjct: 8 AWLARD 13
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 3 AWLPRD 8
AWL RD
Sbjct: 8 AWLARD 13
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 EAWLPR 7
+AW+PR
Sbjct: 813 KAWIPR 818
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 EAWLPR 7
+AW+PR
Sbjct: 818 KAWIPR 823
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 EAWLPR 7
+AW+PR
Sbjct: 813 KAWIPR 818
>sp|VU51_HHV6Z|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6B (strain Z29)
Query: 5 LPRDF 9
LPRDF
Sbjct: 75 LPRDF 79
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 EAWLPRD 8
+AW PRD
Sbjct: 333 QAWTPRD 339
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 EAWLPR 7
+AW+PR
Sbjct: 814 KAWVPR 819
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 AWLPRDFS 10
+LP DFS
Sbjct: 330 GYLPTDFS 337
>sp|VU51_HHV6U|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6A (strain
Query: 5 LPRDF 9
LPRDF
Sbjct: 75 LPRDF 79
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 EAWLPR 7
+AW+PR
Sbjct: 815 KAWVPR 820
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 EAWLPR 7
+AW+PR
Sbjct: 812 KAWVPR 817
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 EAWLPR 7
+AW+PR
Sbjct: 815 KAWVPR 820
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 EAWLPR 7
+AW+PR
Sbjct: 813 KAWVPR 818
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 AWLPR 7
AW+PR
Sbjct: 825 AWIPR 829
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 AWLPR 7
AW+PR
Sbjct: 825 AWIPR 829
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 AWLPR 7
AW+PR
Sbjct: 825 AWIPR 829
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 AWLPR 7
AW+PR
Sbjct: 825 AWIPR 829
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 1 PEAWLPRDFS 10
P A PRDF+
Sbjct: 415 PHAPSPRDFA 424
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 AWLPR 7
AW+PR
Sbjct: 816 AWVPR 820
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 AWLPR 7
AW+PR
Sbjct: 816 AWVPR 820
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 AWLPR 7
AW+PR
Sbjct: 798 AWVPR 802
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 AWLPR 7
AW+PR
Sbjct: 816 AWVPR 820
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 AWLPR 7
AW+PR
Sbjct: 815 AWVPR 819
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 AWLPR 7
AW+PR
Sbjct: 815 AWVPR 819
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 AWLPR 7
AW+PR
Sbjct: 818 AWVPR 822
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 AWLPR 7
AW+PR
Sbjct: 825 AWIPR 829
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 WLPRD 8
WLP D
Sbjct: 6863 WLPTD 6867
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 3 AWLPR 7
AW+PR
Sbjct: 818 AWIPR 822
>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2
Query: 2 EAWLPRD 8
+AW P+D
Sbjct: 339 QAWTPKD 345
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 AWLPRDFS 10
+LP DFS
Sbjct: 330 GFLPTDFS 337
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 2 EAWLPRD 8
+AW P+D
Sbjct: 333 QAWTPKD 339
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 3 AWLPR 7
AWLPR
Sbjct: 401 AWLPR 405
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 2 EAWLPRD 8
+AW P+D
Sbjct: 333 QAWTPKD 339
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 EAWLPR 7
+AW PR
Sbjct: 810 KAWCPR 815
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 PEAWL 5
P+AWL
Sbjct: 1646 PKAWL 1650
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 EAWLPR 7
+AW PR
Sbjct: 817 KAWCPR 822
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 2 EAWLPRD 8
+ W PRD
Sbjct: 326 QTWTPRD 332
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 EAWLPR 7
+AW PR
Sbjct: 817 KAWCPR 822
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 EAWLPR 7
+AW PR
Sbjct: 812 KAWCPR 817
>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3
Query: 2 EAWLPRD 8
+ W PRD
Sbjct: 326 QTWTPRD 332
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 EAWLPR 7
+AW PR
Sbjct: 815 KAWAPR 820
>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3
Query: 2 EAWLPRD 8
+ W PRD
Sbjct: 326 QTWTPRD 332
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 EAWLPR 7
+AW PR
Sbjct: 823 KAWCPR 828
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 EAWLPRD 8
+AW P+D
Sbjct: 333 QAWTPKD 339
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 2 EAWLPRD 8
+AW P+D
Sbjct: 339 QAWTPKD 345
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 EAWLPRD 8
+ W PRD
Sbjct: 326 QTWTPRD 332
181|SequenceR|910|901|TEGLCPEAWL
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 2 EGLCPEAWL 10
EG+CPE W+
Sbjct: 82 EGVCPEDWI 90
>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)
Query: 2 EGLCPEAWL 10
EG+CPE W+
Sbjct: 82 EGVCPEDWV 90
>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 EGLCPEAW 9
EG+CPE W
Sbjct: 82 EGICPEDW 89
>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 2 EGLCPEAW 9
EG+CPE W
Sbjct: 82 EGVCPEDW 89
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 2 EGLCPEAW 9
EG CPE W
Sbjct: 82 EGTCPEDW 89
>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)
Query: 2 EGLCPEAW 9
EG CPE W
Sbjct: 82 EGTCPEDW 89
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 2 EGLCPEAW 9
EG CPE W
Sbjct: 82 EGTCPEDW 89
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 2 EGLCPEAW 9
EG CPE W
Sbjct: 82 EGTCPEDW 89
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 2 EGLCPEAW 9
EG CPE W
Sbjct: 82 EGTCPEDW 89
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 2 EGLCPEAW 9
EG CPE W
Sbjct: 82 EGTCPEDW 89
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 2 EGLCPEAW 9
EG CPE W
Sbjct: 82 EGTCPEDW 89
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 2 EGLCPEAW 9
EG CPE W
Sbjct: 82 EGTCPEDW 89
>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)
Query: 2 EGLCPEAW 9
EG CPE W
Sbjct: 82 EGTCPEDW 89
>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)
Query: 2 EGLCPEAW 9
EG CPE W
Sbjct: 82 EGTCPEDW 89
>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)
Query: 2 EGLCPEAW 9
EG CPE W
Sbjct: 82 EGTCPEDW 89
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 2 EGLCPEAW 9
EG CPE W
Sbjct: 82 EGTCPEDW 89
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 EGLCPEAW 9
EGLC +AW
Sbjct: 740 EGLCQKAW 747
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 EGLCPEAW 9
EGLC +AW
Sbjct: 740 EGLCQKAW 747
>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)
Query: 2 EGLCPEAWL 10
EG CP+ W+
Sbjct: 82 EGACPDDWV 90
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 TEGLCPE 7
T+G+CPE
Sbjct: 49 TDGICPE 55
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 TEGLCPE 7
T+G+CPE
Sbjct: 49 TDGICPE 55
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 EGLCPEAW 9
EGLC + W
Sbjct: 744 EGLCQKMW 751
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 EGLCPEAW 9
EGLC + W
Sbjct: 746 EGLCQKLW 753
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 EGLCPEAW 9
EGLC + W
Sbjct: 746 EGLCQKLW 753
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 EGLCPEAW 9
EGLC + W
Sbjct: 746 EGLCQKLW 753
>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 4 LCPEAW 9
+CP AW
Sbjct: 290 VCPTAW 295
>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 4 LCPEAW 9
+CP AW
Sbjct: 290 VCPTAW 295
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 5 CPEAW 9
CPE W
Sbjct: 198 CPEFW 202
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 5 CPEAW 9
CPE W
Sbjct: 198 CPEFW 202
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 2 EGLCPEA 8
+ LCPEA
Sbjct: 200 DDLCPEA 206
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 LCPEA 8
LCPEA
Sbjct: 202 LCPEA 206
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 2 EGLCPEAWL 10
EGL P+A L
Sbjct: 545 EGLLPDALL 553
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 EGLCPEAW 9
EG C + W
Sbjct: 740 EGFCQKLW 747
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 TEGLC 5
TEGLC
Sbjct: 5960 TEGLC 5964
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 TEGLC 5
TEGLC
Sbjct: 5937 TEGLC 5941
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 4 LCPEAWL 10
+CP W+
Sbjct: 246 VCPHQWI 252
>sp|MC148_MCV1|CHEMOKINE-LIKE protein MC148|Molluscum contagiosum virus subtype 1
Query: 4 LCPEAW 9
LCP+ W
Sbjct: 93 LCPQIW 98
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 4 LCPEAWL 10
+CP W+
Sbjct: 246 VCPHQWI 252
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 4 LCPEAWL 10
+CP W+
Sbjct: 246 VCPHQWI 252
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 4 LCPEAWL 10
+CP W+
Sbjct: 246 VCPHQWI 252
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 2 EGLCP 6
+GLCP
Sbjct: 181 QGLCP 185
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 EGLCPEAWL 10
EGL P A+L
Sbjct: 140 EGLDPSAYL 148
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 EGLCPEAWL 10
EGL P A+L
Sbjct: 140 EGLDPSAYL 148
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 EGLCPEAWL 10
EGL P A+L
Sbjct: 140 EGLDPSAYL 148
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 4 LCPEAWL 10
+CP W+
Sbjct: 246 VCPHQWI 252
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 EGLCPEAW 9
EG C + W
Sbjct: 740 EGYCQKLW 747
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 EGLCPEAW 9
EG C + W
Sbjct: 740 EGYCQKLW 747
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 EGLCPEAW 9
EG C + W
Sbjct: 740 EGYCQKLW 747
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 TEGLCPEAWL 10
T LC + W+
Sbjct: 519 TYNLCSDVWM 528
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 1 TEGLCPEAWL 10
T LC + W+
Sbjct: 518 TYNLCSDVWM 527
>sp|NSP5_ROTJ1|NON-STRUCTURAL protein 5|Rotavirus X (strain
Query: 2 EGLCPEAW 9
+ +C E+W
Sbjct: 80 DSVCEESW 87
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 1 TEGLCPEAWL 10
T LC + W+
Sbjct: 521 TYNLCSDVWM 530
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 EGLCPEAW 9
EG C + W
Sbjct: 778 EGWCQKLW 785
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 2 EGLCPEAW 9
EG C + W
Sbjct: 778 EGWCQKLW 785
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 2 EGLCPEAW 9
EG C + W
Sbjct: 778 EGWCQKLW 785
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 EGLCPEAW 9
EG C + W
Sbjct: 712 EGWCQKLW 719
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 4 LCPEAWL 10
LCPE L
Sbjct: 239 LCPEVTL 245
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 EGLCPEA 8
EGL P+A
Sbjct: 1486 EGLIPDA 1492
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 3 GLCPEAWL 10
G C E W+
Sbjct: 280 GYCLEEWM 287
>sp|VFUS_VACC6|14 kDa fusion protein|Vaccinia virus (strain WR 65-16)
Query: 4 LCPEAW 9
L PEAW
Sbjct: 19 LLPEAW 24
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 3 GLCPEAWL 10
G C E W+
Sbjct: 269 GYCLEEWM 276
>sp|TEG7_HHV8P|TEGUMENT protein ORF55|Human herpesvirus 8 type P
Query: 5 CPEAW 9
CPE W
Sbjct: 33 CPERW 37
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 3 GLCPEAWL 10
G C E W+
Sbjct: 263 GYCLERWM 270
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 3 GLCPEAWL 10
G C E W+
Sbjct: 272 GYCLERWM 279
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 1 TEGLCPEAW 9
T+G C W
Sbjct: 333 TKGCCXRCW 341
>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40
Query: 3 GLCPEAW 9
G+C ++W
Sbjct: 254 GICVDSW 260
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 3 GLCPEAWL 10
G C E W+
Sbjct: 268 GYCLERWM 275
182|SequenceR|915|906|DEPERTEGLC
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DEPERTEG 8
D PE TEG
Sbjct: 707 DRPEETEG 714
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 1 DEPERTEGL 9
D+P+RT G+
Sbjct: 439 DQPKRTTGV 447
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 DEPERTEGLC 10
D +TEGLC
Sbjct: 5955 DTKFKTEGLC 5964
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 RTEGLC 10
+TEGLC
Sbjct: 5936 KTEGLC 5941
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 DEPERTEGL 9
D P+RT G+
Sbjct: 439 DNPKRTTGV 447
>sp|VP7_ROTH7|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 1 DEPERTEGLC 10
DEP T LC
Sbjct: 73 DEPFLTSTLC 82
>sp|UL92_EBVB9|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain B95-8)
Query: 2 EPERTEGL 9
EPE+ +GL
Sbjct: 105 EPEQVQGL 112
>sp|UL92_EBVA8|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain AG876)
Query: 2 EPERTEGL 9
EPE+ +GL
Sbjct: 105 EPEQVQGL 112
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 1 DEPERTEGL 9
D+PE T G+
Sbjct: 2 DDPEGTNGV 10
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 1 DEPERTEG 8
++PE TEG
Sbjct: 2 EDPEGTEG 9
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 2 EPERTEG 8
+P RTEG
Sbjct: 2361 QPPRTEG 2367
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 1 DEPERTE 7
DEP R+E
Sbjct: 37 DEPSRSE 43
>sp|NCAP_PI2HT|NUCLEOPROTEIN parainfluenza 2 virus (strain
Query: 3 PERTEGL 9
P+RT G+
Sbjct: 489 PQRTSGM 495
183|SequenceR|920|911|LAPAPDEPER
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 PAPDEPER 10
P+P EP+R
Sbjct: 712 PSPREPDR 719
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LAPAPDEPE 9
L PAP EP+
Sbjct: 719 LLPAPREPD 727
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LAPAPDEPER 10
L PAP P+R
Sbjct: 727 LLPAPRGPDR 736
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PDEPER 10
PD PER
Sbjct: 727 PDRPER 732
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LAPAPDEPER 10
L P+P P+R
Sbjct: 715 LTPSPRGPDR 724
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 PAPDEPER 10
PAP P+R
Sbjct: 713 PAPRGPDR 720
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 PAPDEPER 10
PAP P+R
Sbjct: 731 PAPRGPDR 738
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 PAPDEPER 10
PAP P+R
Sbjct: 733 PAPRGPDR 740
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 LAPAPDEPER 10
A AP EP R
Sbjct: 621 FAAAPPEPSR 630
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LAPAPDEPER 10
L P+P P+R
Sbjct: 696 LIPSPRGPDR 705
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 APAPDEPER 10
AP P P R
Sbjct: 13 APPPPRPSR 21
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 APAPDEPER 10
AP P P R
Sbjct: 13 APPPPRPSR 21
>sp|PG097_MONPV|PROTEIN OPG097|Monkeypox virus (MPXV)
Query: 3 PAPDEPER 10
P P++P R
Sbjct: 42 PQPNQPPR 49
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 2 APAPDEP 8
PAPDEP
Sbjct: 380 VPAPDEP 386
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 1 LAPAPDEP 8
PAPD P
Sbjct: 452 FVPAPDNP 459
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 1 LAPAPDEP 8
PAPD P
Sbjct: 422 FVPAPDNP 429
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 1 LAPAPDEP 8
PAPD P
Sbjct: 424 FVPAPDNP 431
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 PDEPER 10
PD PER
Sbjct: 1909 PDGPER 1914
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 PDEPER 10
PD PER
Sbjct: 1909 PDGPER 1914
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 APAPDEPE 9
A PD PE
Sbjct: 703 ARGPDRPE 710
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 APAPDEPE 9
A PD PE
Sbjct: 697 ARGPDRPE 704
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 LAPAPDEPE 9
L PAP PE
Sbjct: 423 LVPAPGHPE 431
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 LAPAPDEP 8
PAPD P
Sbjct: 424 FVPAPDNP 431
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 LAPAPDEP 8
PAPD P
Sbjct: 424 FVPAPDNP 431
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 PDEPER 10
PDEP R
Sbjct: 459 PDEPSR 464
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LAPAPDEPE 9
L PAP P+
Sbjct: 717 LLPAPRGPD 725
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LAPAPDEPE 9
L PAP P+
Sbjct: 717 LLPAPRGPD 725
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 APAPDEPE 9
APA EPE
Sbjct: 1676 APAGFEPE 1683
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 1 LAPAPDEP 8
P PD P
Sbjct: 431 FVPTPDNP 438
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 1 LAPAPDEP 8
P PD P
Sbjct: 420 FVPTPDNP 427
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 PAPDEPER 10
P PDEP +
Sbjct: 329 PNPDEPSQ 336
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 1 LAPAPDEP 8
P PD P
Sbjct: 422 FVPTPDNP 429
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 1 LAPAPDEP 8
P PD P
Sbjct: 422 FVPTPDNP 429
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 4 APDEPE 9
+P+EPE
Sbjct: 260 SPEEPE 265
184|SequenceR|925|916|VFLEKLAPAP
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VFLEKLAPA 9
+FLEK+ PA
Sbjct: 1170 LFLEKIEPA 1178
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VFLEKLAPA 9
+FLEK+ PA
Sbjct: 1168 LFLEKIEPA 1176
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VFLEKLAPA 9
+FLEK+ PA
Sbjct: 1169 LFLEKIEPA 1177
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VFLEKLAPA 9
+FLEK+ PA
Sbjct: 1170 LFLEKIEPA 1178
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VFLEKLAPA 9
+FLEK+ PA
Sbjct: 1169 LFLEKIEPA 1177
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VFLEKLAPA 9
+FLEK+ PA
Sbjct: 1171 LFLEKIEPA 1179
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VFLEKLAPA 9
+FLEK+ PA
Sbjct: 1170 LFLEKIEPA 1178
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VFLEKLAPA 9
+FLEK+ PA
Sbjct: 1168 LFLEKIEPA 1176
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VFLEKLAPA 9
+FLEK+ PA
Sbjct: 1169 LFLEKIEPA 1177
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VFLEKLAPA 9
+FLEK+ PA
Sbjct: 1170 LFLEKIEPA 1178
185|SequenceR|930|921|PEGPLVFLEK
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 PEGPLVFLEK 10
PEG L LEK
Sbjct: 147 PEGVLSCLEK 156
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 PEGPLVFLEK 10
PEG L LEK
Sbjct: 147 PEGVLSCLEK 156
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 3 GPLVFLEK 10
GP+VF ++
Sbjct: 545 GPVVFTQR 552
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 3 GPLVFLEK 10
GP+VF ++
Sbjct: 610 GPVVFTQR 617
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 3 GPLVFLEK 10
GP+VF ++
Sbjct: 610 GPVVFTQR 617
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 PEGPLVFLEK 10
PEG L LE+
Sbjct: 147 PEGVLSCLER 156
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 PEGPLVFLEK 10
PEG L LE+
Sbjct: 147 PEGVLSCLER 156
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 PEGPLVFLEK 10
PEG L LE+
Sbjct: 147 PEGVLSCLER 156
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 PEGPLVFLEK 10
PEG L LE+
Sbjct: 147 PEGVLSCLER 156
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 PEGPLVFLEK 10
PEG L LE+
Sbjct: 147 PEGVLSCLER 156
186|SequenceR|935|926|HLQSRPEGPL
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 2 LQSRPEGPL 10
++ RPE P+
Sbjct: 391 IEGRPEDPV 399
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 LQSRPEGPL 10
++ RPE P+
Sbjct: 390 IEGRPEDPV 398
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 451 LQSRPE 456
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 455 LQSRPE 460
>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 450 LQSRPE 455
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 447 LQSRPE 452
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 448 LQSRPE 453
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 449 LQSRPE 454
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 449 LQSRPE 454
>sp|VE7_HPV56|PROTEIN E7|Human papillomavirus 56
Query: 1 HLQSRPE 7
HLQ RP+
Sbjct: 42 HLQERPQ 48
>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 451 LQSRPE 456
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 448 LQSRPE 453
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 449 LQSRPE 454
>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 444 LQSRPE 449
>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 449 LQSRPE 454
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 443 LQSRPE 448
>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 446 LQSRPE 451
>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 449 LQSRPE 454
>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 449 LQSRPE 454
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 451 LQSRPE 456
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 449 LQSRPE 454
>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 449 LQSRPE 454
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 449 LQSRPE 454
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 461 LQSRPE 466
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 449 LQSRPE 454
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 461 LQSRPE 466
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 449 LQSRPE 454
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 461 LQSRPE 466
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 4 SRPEGPL 10
S PE PL
Sbjct: 545 SNPENPL 551
>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LQSRPE 7
LQSRPE
Sbjct: 450 LQSRPE 455
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 HLQSRPE 7
HL +RPE
Sbjct: 333 HLSARPE 339
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 HLQSRPE 7
HL +RPE
Sbjct: 402 HLSARPE 408
>sp|NP1_HBOC1|NON-STRUCTURAL protein NP-1|Primate bocaparvovirus 1 (strain Human
Query: 1 HLQSRPEGP 9
H S PE P
Sbjct: 97 HRASNPEAP 105
187|SequenceR|940|931|NKPLQHLQSR
>sp|U21_HHV7R|U21 glycoprotein|Human herpesvirus 7 (strain RK)
Query: 3 PLQHLQ 8
PLQH+Q
Sbjct: 393 PLQHIQ 398
>sp|U21_HHV7J|U21 glycoprotein|Human herpesvirus 7 (strain JI)
Query: 3 PLQHLQ 8
PLQH+Q
Sbjct: 393 PLQHIQ 398
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 KPLQHLQ 8
KPL+H Q
Sbjct: 459 KPLEHFQ 465
>sp|E3B14_ADE07|EARLY E3B 14.9 kDa protein|Human adenovirus B serotype 7
Query: 3 PLQHLQ 8
PLQH+Q
Sbjct: 99 PLQHIQ 104
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 3 PLQHLQSR 10
PL H+Q R
Sbjct: 775 PLIHIQDR 782
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PLQHLQS 9
PLQH Q+
Sbjct: 296 PLQHWQT 302
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PLQHLQS 9
PLQH Q+
Sbjct: 296 PLQHWQT 302
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 3 PLQHLQSR 10
PL H+Q R
Sbjct: 775 PLIHIQDR 782
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PLQHLQS 9
PLQH Q+
Sbjct: 296 PLQHWQT 302
>sp|VL2_HPV35|MINOR capsid protein L2|Human papillomavirus 35
Query: 2 KPLQHLQS 9
+PLQH+ S
Sbjct: 337 QPLQHVPS 344
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 3 PLQHLQSR 10
PLQHL ++
Sbjct: 1165 PLQHLFAK 1172
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 3 PLQHLQSR 10
PLQHL ++
Sbjct: 1168 PLQHLFAK 1175
>sp|E3B14_ADE03|EARLY E3B 14.5 kDa protein|Human adenovirus B serotype 3
Query: 3 PLQHLQ 8
PLQH+Q
Sbjct: 99 PLQHIQ 104
>sp|ORF45_HHV8P|PROTEIN ORF45|Human herpesvirus 8 type P
Query: 2 KPLQHLQSR 10
+PL HL+ R
Sbjct: 123 QPLSHLRPR 131
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 NKPLQHL 7
N P QHL
Sbjct: 1292 NAPQQHL 1298
>sp|BTRF1_EBVG|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PLQHL 7
PLQHL
Sbjct: 255 PLQHL 259
>sp|BTRF1_EBVB9|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PLQHL 7
PLQHL
Sbjct: 255 PLQHL 259
>sp|BTRF1_EBVA8|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PLQHL 7
PLQHL
Sbjct: 255 PLQHL 259
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 1 NKPLQH 6
N+PL+H
Sbjct: 370 NRPLKH 375
188|SequenceR|945|936|LESLPNKPLQ
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 LESLPNK 7
LESLP K
Sbjct: 3166 LESLPRK 3172
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 2 ESLPNKP 8
+S+PN+P
Sbjct: 306 QSMPNRP 312
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 2 ESLPNKP 8
+S+PN+P
Sbjct: 318 QSMPNRP 324
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 2 ESLPNKP 8
+S+PN+P
Sbjct: 330 QSMPNRP 336
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 3 SLPNKP 8
SLPN P
Sbjct: 268 SLPNAP 273
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 2 ESLPNKP 8
+S+PN+P
Sbjct: 235 QSMPNRP 241
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 SLPNKP 8
SLPN P
Sbjct: 128 SLPNSP 133
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 2 ESLPNKPLQ 10
ES+P P Q
Sbjct: 237 ESIPTTPCQ 245
>sp|VP8_VACCC|CORE protein VP8|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LESLPNKPLQ 10
LES + PLQ
Sbjct: 214 LESYSSSPLQ 223
>sp|VP8_MONPV|CORE protein VP8|Monkeypox virus (MPXV)
Query: 1 LESLPNKPLQ 10
LES + PLQ
Sbjct: 214 LESYSSSPLQ 223
189|SequenceR|950|941|SKVVPLESLP
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 3 VVPLESLP 10
VVP+E+LP
Sbjct: 467 VVPMETLP 474
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 KVVPLESLP 10
K +P+ESLP
Sbjct: 603 KSLPVESLP 611
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 VVPLESLP 10
+VP+E+LP
Sbjct: 467 IVPMETLP 474
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 5 PLESLP 10
PLE+LP
Sbjct: 943 PLENLP 948
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 KVVPLESLP 10
K +P+ESLP
Sbjct: 603 KSLPVESLP 611
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 SKVVPLESLP 10
S + P ES+P
Sbjct: 60 STIQPFESVP 69
>sp|NS1_I30A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 KVVPLESLP 10
++ PL SLP
Sbjct: 159 EISPLHSLP 167
>sp|NS1_I56A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 2 KVVPLESLP 10
+++P+ SLP
Sbjct: 159 EILPIPSLP 167
190|SequenceR|955|946|LAVRKSKVVP
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 RKSKVVP 10
RK+K+VP
Sbjct: 894 RKAKMVP 900
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 RKSKVV 9
RKSKVV
Sbjct: 3708 RKSKVV 3713
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 RKSKVV 9
RKSKVV
Sbjct: 3708 RKSKVV 3713
191|SequenceR|963|951|PLGDDELSLAVRK
>sp|U15_HHV6Z|PROTEIN U15|Human herpesvirus 6B (strain Z29)
Query: 2 LGDDELSLAVR 12
LGDDE A+R
Sbjct: 139 LGDDEEQNAIR 149
>sp|U15_HHV6U|UNCHARACTERIZED protein U15|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LGDDELSLAVR 12
LGDDE A+R
Sbjct: 139 LGDDEEQNAIR 149
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 PLGDDE 6
P+GDDE
Sbjct: 36 PIGDDE 41
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 PLGDDE 6
P+GDDE
Sbjct: 18 PIGDDE 23
>sp|REV_HV1S2|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 4 DDELSLAVR 12
DD+L LAVR
Sbjct: 9 DDQLLLAVR 17
>sp|REV_HV1S9|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 4 DDELSLAVR 12
DD+L LAVR
Sbjct: 9 DDQLLLAVR 17
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 PLGDDELSLAVRK 13
PL E +LAVR+
Sbjct: 567 PLNPYERALAVRQ 579
>sp|VP8_MONPV|CORE protein VP8|Monkeypox virus (MPXV)
Query: 2 LGDDELSL 9
LGDD+L++
Sbjct: 82 LGDDKLTI 89
>sp|VP8_VACCC|CORE protein VP8|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LGDDELSL 9
LGDD+L++
Sbjct: 82 LGDDKLTI 89
>sp|VP8_VARV|CORE protein VP8|Variola virus
Query: 2 LGDDELSL 9
LGDD+L++
Sbjct: 82 LGDDKLTI 89
>sp|VP8_VAR67|CORE protein VP8|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 LGDDELSL 9
LGDD+L++
Sbjct: 82 LGDDKLTI 89
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 LGDDELSLAVRK 13
L DD++ + VR+
Sbjct: 1828 LHDDDIDIKVRR 1839
>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)
Query: 1 PLGDDELSL 9
P+G+DE+ L
Sbjct: 82 PIGEDEVFL 90
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 1 PLGDDELSL 9
P+G+DE+ L
Sbjct: 82 PIGEDEVFL 90
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 1 PLGDDELSLAVRK 13
PL E +LAVR+
Sbjct: 698 PLSPYERALAVRE 710
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 PLGDDELSLAVRK 13
PL E +LAVR+
Sbjct: 628 PLNPYERALAVRE 640
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 LGDDELSLAV 11
LGDD +LAV
Sbjct: 1148 LGDDFSTLAV 1157
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 1 PLGDDELSL 9
P+G+DE+ L
Sbjct: 82 PVGEDEVFL 90
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 LGDDELSLAV 11
LGDD +LAV
Sbjct: 1148 LGDDFSTLAV 1157
>sp|BILF2_EBVB9|GLYCOPROTEIN BILF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 GDDELSLAV 11
GD +L LAV
Sbjct: 60 GDGQLPLAV 68
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 PLGDDELSLAVR 12
PL E +LAVR
Sbjct: 694 PLNPYERALAVR 705
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 2 LGDDELSL 9
LGD+ LSL
Sbjct: 1050 LGDEVLSL 1057
THE END