COL12_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|EEEEAFDDKM

>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EEEAFDDKM 10
+EE FDDK+
Sbjct: 11 DEENFDDKL 19


>sp|ECFA2_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 3 EEAFDDK 9
EEAF DK
Sbjct: 225 EEAFSDK 231


>sp|PYRH_METHJ|URIDYLATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EEEEAFDDKM 10
E +EAF D++
Sbjct: 59 EADEAFSDEL 68




2|SequenceR|15|6|GFSQVEEEEA

>sp|PSA_NATPD|PROTEASOME subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GFSQVEEEE 9
GFSQ+ +EE
Sbjct: 224 GFSQLSDEE 232


>sp|HBCAL_NITMS|4-HYDROXYBUTYRATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 1 GFSQVEEEEA 10
GF +V+EE A
Sbjct: 99 GFKEVDEEGA 108




3|SequenceR|20|11|GFRKYGFSQV

>sp|ACKA_METMZ|ACETATE kinase|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 GFRKYGF 7
G RKYGF
Sbjct: 173 GIRKYGF 179


>sp|ACKA_METMA|ACETATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GFRKYGF 7
G RKYGF
Sbjct: 173 GIRKYGF 179


>sp|ACKA_METAC|ACETATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GFRKYGF 7
G RKYGF
Sbjct: 173 GIRKYGF 179


>sp|ACKA_METTE|ACETATE kinase|Methanosarcina thermophila

Query: 1 GFRKYGF 7
G RKYGF
Sbjct: 173 GVRKYGF 179


>sp|ACKA_METBF|ACETATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GFRKYGF 7
G RKYGF
Sbjct: 173 GVRKYGF 179


>sp|ARSM_METAC|ARSENITE methyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 RKYGFSQV 10
RKYG+S V
Sbjct: 119 RKYGYSNV 126


>sp|SYH_METKA|HISTIDINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 FRKYGFSQV 10
FR YG+ +V
Sbjct: 36 FRSYGYEEV 44


>sp|SYR_PYRAE|ARGININE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 RKYGFSQ 9
RKYGF++
Sbjct: 100 RKYGFTE 106


>sp|PRIL_METAR|DNA primase large subunit PriL|Methanocella arvoryzae (strain DSM

Query: 1 GFRKYGFSQ 9
GF KY F+Q
Sbjct: 5 GFAKYPFTQ 13


>sp|AROE_PYRAB|SHIKIMATE dehydrogenase (NADP(+))|Pyrococcus abyssi (strain GE5 /

Query: 2 FRKYGFSQV 10
FRKYG V
Sbjct: 24 FRKYGIDAV 32


>sp|SYH_KORCO|HISTIDINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 FRKYGFSQV 10
FR+YGF +
Sbjct: 30 FRRYGFDPI 38


>sp|KATG_HALSA|CATALASE-PEROXIDASE salinarum (strain ATCC 700922

Query: 1 GFRKYGFS 8
GF YGF+
Sbjct: 152 GFETYGFA 159


>sp|KATG_HALS3|CATALASE-PEROXIDASE salinarum (strain ATCC 29341

Query: 1 GFRKYGFS 8
GF YGF+
Sbjct: 152 GFETYGFA 159


>sp|PYLD_METAC|PYRROLYSINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GFRKYGF 7
GFR YG+
Sbjct: 164 GFRVYGY 170


>sp|ASNH1_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing] 1|Methanocaldococcus

Query: 3 RKYGFSQ 9
+KYGFS+
Sbjct: 517 KKYGFSK 523


>sp|SYH_NATPD|HISTIDINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 RKYGFSQV 10
R+YGF +V
Sbjct: 31 RRYGFREV 38


>sp|SYH_SACS2|HISTIDINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 RKYGFSQV 10
+KYG+S++
Sbjct: 33 KKYGYSEI 40


>sp|HEMH_THEAC|FERROCHELATASE acidophilum (strain ATCC 25905

Query: 1 GFRKYGFS 8
R+YGFS
Sbjct: 122 ALRRYGFS 129


>sp|PMDHL_THEKO|PHOSPHOMEVALONATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 FRKYGFS 8
FR +GFS
Sbjct: 366 FRSFGFS 372


>sp|RPO2C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo2C|Archaeoglobus fulgidus (strain ATCC

Query: 2 FRKYGFSQ 9
+KYGFS
Sbjct: 442 LKKYGFSH 449


>sp|Y240_METJA|PUTATIVE adenylate cyclase MJ0240|Methanocaldococcus jannaschii (strain ATCC

Query: 2 FRKYGFSQV 10
F+K GF +V
Sbjct: 94 FKKLGFKEV 102


>sp|ASSY_ARCFU|ARGININOSUCCINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KYGFSQV 10
KYGF +V
Sbjct: 23 KYGFDEV 29




4|SequenceR|25|16|TGEQIGFRKY

>sp|RS14Z_PICTO|SMALL ribosomal subunit protein uS14|Picrophilus torridus (strain ATCC

Query: 1 TGEQIGFRKY 10
T QIGFRKY
Sbjct: 42 TANQIGFRKY 51


>sp|Y36K_HALSN|UNCHARACTERIZED 36 kDa protein|Halobacterium sp. (strain GN101)

Query: 1 TGEQIGFR 8
TGE++GFR
Sbjct: 56 TGERVGFR 63


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 EQIGFRKY 10
E++G+RKY
Sbjct: 9 EKLGYRKY 16


>sp|UPP_HALSA|URACIL phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 TGEQIGFRK 9
T EQ+ FRK
Sbjct: 28 TTEQVSFRK 36


>sp|UPP_HALS3|URACIL phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 TGEQIGFRK 9
T EQ+ FRK
Sbjct: 28 TTEQVSFRK 36


>sp|RS14Z_THEVO|SMALL ribosomal subunit protein uS14|Thermoplasma volcanium (strain

Query: 1 TGEQIGFRKY 10
T Q+GF KY
Sbjct: 43 TARQLGFEKY 52


>sp|RS14Z_THEAC|SMALL ribosomal subunit protein uS14|Thermoplasma acidophilum (strain

Query: 1 TGEQIGFRKY 10
T Q+GF KY
Sbjct: 43 TARQLGFEKY 52


>sp|GCH3_AERPE|GTP cyclohydrolase III|Aeropyrum pernix (strain ATCC 700893

Query: 3 EQIGFRKY 10
EQ+G+R++
Sbjct: 13 EQVGYREW 20


>sp|RS14Z_PYRAE|SMALL ribosomal subunit protein uS14|Pyrobaculum aerophilum (strain

Query: 1 TGEQIGFRKY 10
Q+GF+KY
Sbjct: 44 VAPQLGFKKY 53


>sp|ACDE1_METBF|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina

Query: 5 IGFRKY 10
IGF+KY
Sbjct: 114 IGFKKY 119


>sp|RS14Z_METKA|SMALL ribosomal subunit protein uS14|Methanopyrus kandleri (strain AV19

Query: 1 TGEQIGFRKY 10
E++GF+KY
Sbjct: 38 VAEKMGFKKY 47


>sp|RS14Z_PYRHO|SMALL ribosomal subunit protein uS14|Pyrococcus horikoshii (strain ATCC

Query: 1 TGEQIGFRKY 10
++GFRKY
Sbjct: 46 VAPKLGFRKY 55


>sp|RS14Z_PYRAB|SMALL ribosomal subunit protein uS14|Pyrococcus abyssi (strain GE5 /

Query: 1 TGEQIGFRKY 10
++GFRKY
Sbjct: 46 VAPKLGFRKY 55


>sp|RS14Z_PYRFU|SMALL ribosomal subunit protein uS14|Pyrococcus furiosus (strain ATCC

Query: 1 TGEQIGFRKY 10
++GFRKY
Sbjct: 46 VAPKLGFRKY 55


>sp|TRM14_PYRFU|TRNA (guanine(6)-N2)-methyltransferase|Pyrococcus furiosus (strain ATCC

Query: 1 TGEQIGFRKY 10
+GE IG KY
Sbjct: 241 SGEIIGIEKY 250


>sp|RS14Z_HALMA|SMALL ribosomal subunit protein uS14|Haloarcula marismortui (strain

Query: 5 IGFRKY 10
+GFRKY
Sbjct: 55 MGFRKY 60


>sp|G1PDH_META3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus aeolicus (strain ATCC

Query: 2 GEQIGFRK 9
GEQ+G+ K
Sbjct: 295 GEQLGYDK 302


>sp|RS14Z_SACS2|SMALL ribosomal subunit protein uS14|Saccharolobus solfataricus (strain

Query: 4 QIGFRKY 10
++GFRKY
Sbjct: 47 ELGFRKY 53


>sp|RS14Z_METTH|SMALL ribosomal subunit protein uS14|Methanothermobacter

Query: 4 QIGFRKY 10
+IGF+KY
Sbjct: 43 KIGFKKY 49


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 TGEQIGFRKY 10
TG+ +G RK+
Sbjct: 87 TGKSVGRRKF 96




5|SequenceR|30|21|CKTCQTGEQI

>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 CKTCQT 6
CK+CQT
Sbjct: 23 CKSCQT 28


>sp|ACAR_SULTO|ACRYLOYL-COENZYME A reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 CKTCQTGEQ 9
C+ CQ GE+
Sbjct: 93 CEYCQIGEE 101


>sp|GLCD1_PICTO|GLUCOSE 1-dehydrogenase 1|Picrophilus torridus (strain ATCC 700027

Query: 4 CQTGEQI 10
C+TGEQ+
Sbjct: 101 CETGEQL 107


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 CKTCQT 6
CK+C+T
Sbjct: 23 CKSCKT 28


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 CKTCQT 6
CK+C+T
Sbjct: 23 CKSCKT 28


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 CKTCQT 6
CK+C+T
Sbjct: 23 CKSCKT 28


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 CKTCQT 6
CK+C+T
Sbjct: 23 CKSCKT 28


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 CKTCQT 6
CK+C+T
Sbjct: 23 CKSCKT 28


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 CKTCQT 6
CK+C+T
Sbjct: 23 CKSCKT 28


>sp|Y1252_METJA|UNCHARACTERIZED protein MJ1252|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CQTGEQI 10
C TGEQ+
Sbjct: 64 CGTGEQL 70


>sp|SYH_METVS|HISTIDINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 KTCQTGEQI 10
K +TGEQ+
Sbjct: 398 KNMETGEQV 406




6|SequenceR|35|26|AWNNKCKTCQ

>sp|TFE_METMJ|TRANSCRIPTION factor E|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 WNNKCKTCQ 10
WN +C C+
Sbjct: 136 WNFECPNCE 144


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 5 KCKTC 9
KCKTC
Sbjct: 14 KCKTC 18


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WNNKC 6
WN+KC
Sbjct: 1296 WNDKC 1300


>sp|NPD_METKA|NAD-DEPENDENT protein deacylase|Methanopyrus kandleri (strain AV19 /

Query: 2 WNNKCKTCQ 10
W ++C +C+
Sbjct: 121 WRDECVSCE 129


>sp|Y1681_METJA|UNCHARACTERIZED protein MJ1681|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WNNKCKTCQ 10
+ +KCK C+
Sbjct: 292 YQDKCKNCR 300


>sp|PGP_SULAC|PHOSPHOGLYCOLATE phosphatase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AWNNKCKTC 9
+W N+ K C
Sbjct: 102 SWQNQFKVC 110


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AWNNKCKTCQ 10
AW KCK Q
Sbjct: 147 AWFLKCKVWQ 156


>sp|SCAF_METTL|DUF35 domain-containing scaffold protein|Methanothermococcus

Query: 5 KCKTC 9
+CKTC
Sbjct: 19 RCKTC 23


>sp|SMC_METVO|CHROMOSOME partition protein Smc|Methanococcus voltae

Query: 3 NNKCKTC 9
NNK TC
Sbjct: 725 NNKINTC 731


>sp|Y1348_METJA|UNCHARACTERIZED protein MJ1348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WNNKCKTCQ 10
+ NK K+CQ
Sbjct: 204 FKNKIKSCQ 212


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 6 CKTCQ 10
CKTC+
Sbjct: 519 CKTCE 523




7|SequenceR|40|31|ISFKLAWNNK

>sp|ARFB_METTH|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanothermobacter thermautotrophicus

Query: 1 ISFKLAWNNK 10
+ ++AWNN+
Sbjct: 127 LGLEIAWNNR 136


>sp|RNP2_META3|RIBONUCLEASE P protein component 2|Methanococcus aeolicus (strain ATCC

Query: 1 ISFKLAWNNK 10
ISFK+ +NN+
Sbjct: 16 ISFKIIYNNE 25


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 2 SFKLAWNNK 10
+ K+AWN K
Sbjct: 706 AMKVAWNEK 714


>sp|EF1A_THESM|ELONGATION factor 1-alpha|Thermococcus sibiricus (strain DSM 12597

Query: 2 SFKLAW 7
SFK AW
Sbjct: 51 SFKFAW 56


>sp|EF1A_THEON|ELONGATION factor 1-alpha|Thermococcus onnurineus (strain NA1)

Query: 2 SFKLAW 7
SFK AW
Sbjct: 51 SFKFAW 56


>sp|EF1A_THEKO|ELONGATION factor 1-alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 SFKLAW 7
SFK AW
Sbjct: 51 SFKFAW 56


>sp|EF1A_THEGJ|ELONGATION factor 1-alpha|Thermococcus gammatolerans (strain DSM 15229

Query: 2 SFKLAW 7
SFK AW
Sbjct: 51 SFKFAW 56


>sp|EF1A_THECE|ELONGATION factor 1-alpha|Thermococcus celer

Query: 2 SFKLAW 7
SFK AW
Sbjct: 51 SFKFAW 56


>sp|EF1A_STAMF|ELONGATION factor 1-alpha|Staphylothermus marinus (strain ATCC 43588

Query: 2 SFKLAW 7
SFK AW
Sbjct: 53 SFKFAW 58


>sp|EF1A_PYRWO|ELONGATION factor 1-alpha|Pyrococcus woesei

Query: 2 SFKLAW 7
SFK AW
Sbjct: 53 SFKFAW 58


>sp|EF1A_PYRHO|ELONGATION factor 1-alpha|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SFKLAW 7
SFK AW
Sbjct: 51 SFKFAW 56


>sp|EF1A_PYRFU|ELONGATION factor 1-alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SFKLAW 7
SFK AW
Sbjct: 51 SFKFAW 56


>sp|EF1A_PYRAB|ELONGATION factor 1-alpha|Pyrococcus abyssi (strain GE5 /

Query: 2 SFKLAW 7
SFK AW
Sbjct: 51 SFKFAW 56


>sp|EF1A_DESMO|ELONGATION factor 1-alpha|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 2 SFKLAW 7
SFK AW
Sbjct: 54 SFKFAW 59


>sp|EF1A_AERPE|ELONGATION factor 1-alpha|Aeropyrum pernix (strain ATCC 700893

Query: 2 SFKLAW 7
SFK AW
Sbjct: 52 SFKFAW 57


>sp|RNZ_CENSY|RIBONUCLEASE Z|Cenarchaeum symbiosum (strain A)

Query: 4 KLAWNNK 10
KL WN K
Sbjct: 47 KLGWNKK 53


>sp|TRMI_PYRAB|TRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase

Query: 4 KLAWNN 9
KLAW N
Sbjct: 132 KLAWEN 137


>sp|OGT_PYRSN|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrococcus sp. (strain NA2)

Query: 1 ISFKLAWNNK 10
++ + WNNK
Sbjct: 14 LTIAIVWNNK 23


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 ISFKLAWNNK 10
+ F L W NK
Sbjct: 614 LRFYLLWENK 623




8|SequenceR|45|36|IYLLIISFKL

***** No hits found ******


9|SequenceR|50|41|LLACLIYLLI

>sp|Y2678_METMA|UNCHARACTERIZED serpin-like protein MM_2675|Methanosarcina mazei (strain ATCC

Query: 1 LLACLIYLL 9
LLAC++ LL
Sbjct: 8 LLACMLALL 16


>sp|TRUD_THESM|PROBABLE tRNA pseudouridine synthase D|Thermococcus sibiricus (strain DSM

Query: 4 CLIYLL 9
CLIYL+
Sbjct: 46 CLIYLI 51




10|SequenceR|55|46|AVTITLLACL

***** No hits found ******


11|SequenceR|60|51|KYGLIAVTIT

>sp|GUAAA_METHJ|GMP synthase [glutamine-hydrolyzing] subunit A|Methanospirillum

Query: 2 YGLIAVTIT 10
YG + VTIT
Sbjct: 97 YGAVEVTIT 105


>sp|Y433_METJA|UNCHARACTERIZED protein MJ0433|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KYGLIAVTIT 10
KYG+IAV ++
Sbjct: 89 KYGMIAVVLS 98




12|SequenceR|65|56|MKEVVKYGLI

>sp|AROB_SULAC|3-DEHYDROQUINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 MKEVVKYGLI 10
+ EV+KYGL+
Sbjct: 172 LAEVIKYGLV 181


>sp|AROB_SULTO|3-DEHYDROQUINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 MKEVVKYGLI 10
+ EV+KYGL+
Sbjct: 171 LAEVIKYGLV 180


>sp|GFCR_METB6|TRANSCRIPTIONAL regulator GfcR|Methanoregula boonei (strain DSM 21154

Query: 1 MKEVVKY 7
M+EVVKY
Sbjct: 157 MREVVKY 163


>sp|AROB_THEVO|3-DEHYDROQUINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 MKEVVKYGLI 10
M EV+KY +I
Sbjct: 180 MSEVIKYAII 189


>sp|AROB_SACS2|3-DEHYDROQUINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 MKEVVKYGL 9
+ EV+KYGL
Sbjct: 172 LAEVIKYGL 180


>sp|AROB_PYRFU|3-DEHYDROQUINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MKEVVKYGLI 10
+ EVVKYG++
Sbjct: 166 LAEVVKYGIL 175


>sp|NIFH1_METTL|NITROGENASE iron protein 1|Methanothermococcus thermolithotrophicus

Query: 4 VVKYGLI 10
VVKYGLI
Sbjct: 276 VVKYGLI 282


>sp|RS4_THEAC|SMALL ribosomal subunit protein uS4|Thermoplasma acidophilum (strain

Query: 2 KEVVKYGL 9
K VVKYGL
Sbjct: 28 KIVVKYGL 35


>sp|AROB_PYRNV|3-DEHYDROQUINATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 EVVKYGL 9
EVVKYGL
Sbjct: 165 EVVKYGL 171


>sp|AROB_PYRIL|3-DEHYDROQUINATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 EVVKYGL 9
EVVKYGL
Sbjct: 165 EVVKYGL 171


>sp|AROB_PYRAE|3-DEHYDROQUINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 EVVKYGL 9
EVVKYGL
Sbjct: 165 EVVKYGL 171


>sp|CBID_THEVO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 MKEVVKYG 8
+KEV+KYG
Sbjct: 370 IKEVLKYG 377


>sp|AROB_THEAC|3-DEHYDROQUINATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MKEVVKYGLI 10
M EV+KY +I
Sbjct: 180 MGEVIKYSII 189


>sp|AROE_METM7|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus maripaludis (strain C7 /

Query: 1 MKEVVKYG 8
+KE +KYG
Sbjct: 232 LKEAIKYG 239


>sp|AROB_PYRCJ|3-DEHYDROQUINATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 MKEVVKYGL 9
+ EVVKYG+
Sbjct: 162 LAEVVKYGV 170


>sp|UPP_THEGJ|URACIL phosphoribosyltransferase|Thermococcus gammatolerans (strain DSM

Query: 1 MKEVVKYG 8
+KEV KYG
Sbjct: 153 LKEVSKYG 160


>sp|RS4_ARCFU|SMALL ribosomal subunit protein uS4|Archaeoglobus fulgidus (strain ATCC

Query: 1 MKEVVKYGL 9
M+ V+KYGL
Sbjct: 27 MQLVIKYGL 35


>sp|TAL_PICTO|PROBABLE transaldolase|Picrophilus torridus (strain ATCC 700027

Query: 1 MKEVVKYGLI 10
+K+ ++YGLI
Sbjct: 13 IKDAIEYGLI 22


>sp|SAHH_THEAC|ADENOSYLHOMOCYSTEINASE acidophilum (strain ATCC 25905

Query: 1 MKEVVKY 7
MK+VVKY
Sbjct: 264 MKDVVKY 270


>sp|SAHH_THEVO|ADENOSYLHOMOCYSTEINASE volcanium (strain ATCC 51530

Query: 1 MKEVVKY 7
MK+VVKY
Sbjct: 264 MKDVVKY 270


>sp|AROE_METVS|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus vannielii (strain ATCC 35089

Query: 1 MKEVVKYGL 9
+KE KYGL
Sbjct: 236 LKEAKKYGL 244


>sp|Y2198_SACI3|UPF0282 protein M1627_2198|Saccharolobus islandicus (strain M.16.27)

Query: 1 MKEVVKYGL 9
M+E+VK GL
Sbjct: 223 MEEIVKNGL 231


>sp|Y2116_SACI4|UPF0282 protein M1425_2116|Saccharolobus islandicus (strain M.14.25 /

Query: 1 MKEVVKYGL 9
M+E+VK GL
Sbjct: 223 MEEIVKNGL 231


>sp|PURL_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MKEVVKYGLI 10
++EVVK GL+
Sbjct: 610 VREVVKEGLV 619


>sp|Y671_SACI1|UPF0282 protein YN1551_0671|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 MKEVVKYGL 9
M+E+VK GL
Sbjct: 223 MEEIVKNGL 231


>sp|Y2281_SACI2|UPF0282 protein LS215_2281|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 MKEVVKYGL 9
M+E+VK GL
Sbjct: 223 MEEIVKNGL 231


>sp|Y2245_SACI7|UPF0282 protein YG5714_2245|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 MKEVVKYGL 9
M+E+VK GL
Sbjct: 223 MEEIVKNGL 231


>sp|Y2122_SACI6|UPF0282 protein M164_2122|Saccharolobus islandicus (strain M.16.4 /

Query: 1 MKEVVKYGL 9
M+E+VK GL
Sbjct: 223 MEEIVKNGL 231


>sp|AROB_PYRAB|3-DEHYDROQUINATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 MKEVVKYGLI 10
M EV+KY ++
Sbjct: 165 MAEVIKYAIL 174


>sp|TRPD_META3|ANTHRANILATE phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 MKEVVKYG 8
+KE+ KYG
Sbjct: 317 LKEIQKYG 324


>sp|PRIS_METS3|DNA primase small subunit PriS|Methanobrevibacter smithii (strain ATCC

Query: 1 MKEVVKY 7
MK+++KY
Sbjct: 231 MKDIIKY 237


>sp|Y433_METJA|UNCHARACTERIZED protein MJ0433|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MKEVVKYGLI 10
+++VKYG+I
Sbjct: 84 FEKIVKYGMI 93


>sp|AROE_METM6|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus maripaludis (strain C6 /

Query: 1 MKEVVKYGL 9
+KE +KYG+
Sbjct: 232 LKEAMKYGV 240


>sp|TRPF_SACS2|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 EVVKYG 8
EVVKYG
Sbjct: 194 EVVKYG 199


>sp|SYK_CENSM|LYSINE--TRNA ligase|Cenarchaeum symbiosum

Query: 2 KEVVKYGLI 10
K++V+YG+I
Sbjct: 407 KKLVEYGVI 415


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 2 KEVVKYGLI 10
KEV +YG+I
Sbjct: 405 KEVEEYGII 413


>sp|Y3251_SACS2|UPF0282 protein SSO3251|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 MKEVVKYGL 9
M+E++K GL
Sbjct: 223 MEEIIKNGL 231




13|SequenceR|70|61|GTVNDMKEVV

>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TVNDMKEVV 10
T+ND++E+V
Sbjct: 819 TLNDIEEIV 827


>sp|CSD_METTH|PROBABLE cysteine desulfurase|Methanothermobacter thermautotrophicus (strain

Query: 1 GTVNDMKEV 9
GTV D+KE+
Sbjct: 168 GTVQDVKEI 176


>sp|SYL_THEVO|LEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GTVNDMKEVV 10
GT+ND+K V
Sbjct: 716 GTLNDLKYAV 725


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TVNDMKEVV 10
T+ND++E++
Sbjct: 819 TLNDIEEII 827


>sp|SYFA_PYRHO|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TVNDMKEVV 10
T+ND+K+V+
Sbjct: 89 TLNDLKDVL 97


>sp|PFDA_NATPD|PREFOLDIN subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GTVNDMKEVV 10
T+ DM EVV
Sbjct: 71 ATIEDMDEVV 80


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GTVNDMKEVV 10
GT+ D++E++
Sbjct: 818 GTLEDVEEII 827


>sp|THIE_METMA|THIAMINE-PHOSPHATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GTVNDMKEVV 10
GT++D+KE V
Sbjct: 46 GTLSDVKESV 55


>sp|CAS1B_SACS2|CRISPR-ASSOCIATED endonuclease Cas1 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GTVNDMKEVV 10
GT ND KE++
Sbjct: 129 GTKNDYKELL 138


>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 3 VNDMKEVV 10
VND KE+V
Sbjct: 56 VNDSKELV 63




14|SequenceR|75|66|STEMGGTVND

>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 STEMGGTVN 9
S ++GGT+N
Sbjct: 208 SNDLGGTIN 216


>sp|PYRG_PYRCJ|CTP synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 139 EIGGTVGD 146


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 139 EIGGTVGD 146


>sp|PYRG_AERPE|CTP synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 143 EIGGTVGD 150


>sp|PYRG_CALMQ|CTP synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 140 EIGGTVGD 147


>sp|PYRG_SULAC|CTP synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 141 EIGGTVGD 148


>sp|PYRG_THEGJ|CTP synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 139 EIGGTVGD 146


>sp|PYRG_PYRHO|CTP synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 139 EIGGTVGD 146


>sp|PYRG_THEKO|CTP synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 139 EIGGTVGD 146


>sp|PYRG_SULTO|CTP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 141 EIGGTVGD 148


>sp|PYRG_PYRFU|CTP synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 139 EIGGTVGD 146


>sp|PYRG_PYRAB|CTP synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 139 EIGGTVGD 146


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 140 EIGGTVGD 147


>sp|PYRG_THEON|CTP synthase|Thermococcus onnurineus (strain NA1)

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 139 EIGGTVGD 146


>sp|PYRG_METJA|CTP synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 141 EIGGTVGD 148


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 140 EVGGTVGD 147


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 140 EIGGTVGD 147


>sp|PYRG_SACS2|CTP synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 142 EIGGTVGD 149


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 144 EVGGTVGD 151


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 140 EIGGTVGD 147


>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 145 EVGGTVGD 152


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 140 EIGGTVGD 147


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 140 EIGGTVGD 147


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 145 EVGGTVGD 152


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 STEMGGTVN 9
S ++GGT N
Sbjct: 212 SNDLGGTTN 220


>sp|PYRG_METST|CTP synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 141 EVGGTVGD 148


>sp|PYRG_METMP|CTP synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 138 EIGGTVGD 145


>sp|PURA_HALMA|ADENYLOSUCCINATE synthetase|Haloarcula marismortui (strain ATCC 43049

Query: 1 STEMGGTVND 10
TE+GG V D
Sbjct: 289 PTELGGVVGD 298


>sp|PYRG_METTH|CTP synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 144 EVGGTVGD 151


>sp|PYRG_META3|CTP synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 138 EIGGTVGD 145


>sp|PYRG_THEVO|CTP synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 140 EVGGTVGD 147


>sp|PYRG_METLZ|CTP synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 146 EVGGTVGD 153


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 STEMGGTVN 9
S ++GGT N
Sbjct: 212 SKDLGGTTN 220


>sp|HMGCS_THEGJ|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 EMGGTVND 10
E+G TVND
Sbjct: 225 ELGLTVND 232


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 TEMGGTVND 10
E+GGTV D
Sbjct: 144 VEVGGTVGD 152


>sp|PYRG_THEAC|CTP synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 140 EVGGTVGD 147


>sp|HMGCS_THEON|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus onnurineus (strain NA1)

Query: 3 EMGGTVND 10
E+G TVND
Sbjct: 225 ELGLTVND 232


>sp|AROK_METBU|SHIKIMATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 3 EMGGTV 8
EMGGTV
Sbjct: 75 EMGGTV 80


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 140 EVGGTVGD 147


>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 152 EVGGTVGD 159


>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 3 EMGGTVND 10
E+GGTV D
Sbjct: 138 EVGGTVGD 145


>sp|PYRG_HALSA|CTP synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 TEMGGTVND 10
E+GGTV D
Sbjct: 149 VEVGGTVGD 157


>sp|PYRG_HALS3|CTP synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 TEMGGTVND 10
E+GGTV D
Sbjct: 149 VEVGGTVGD 157


>sp|G3P_PYRHO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 EMGGTVND 10
E+ GT+ND
Sbjct: 68 EVAGTLND 75




15|SequenceR|80|71|DYTQRSTEMG

>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 DYTQRSTEMG 10
DY +R E+G
Sbjct: 176 DYVRRKAEIG 185


>sp|QUEC_METTH|7-CYANO-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DYTQRSTEM 9
DY QRS M
Sbjct: 32 DYGQRSARM 40


>sp|SYT_CENSY|THREONINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 3 TQRSTEMG 10
T +STEMG
Sbjct: 574 TGKSTEMG 581




16|SequenceR|85|76|ATLKDDYTQR

>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 1 ATLKDDYTQR 10
+TLK+DY +R
Sbjct: 342 STLKNDYKER 351


>sp|RL3_PYRHO|LARGE ribosomal subunit protein uL3|Pyrococcus horikoshii (strain ATCC

Query: 1 ATLKDDYTQ 9
ATL DYTQ
Sbjct: 131 ATLPKDYTQ 139


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TLKDDYTQ 9
TLKDDY +
Sbjct: 150 TLKDDYIE 157


>sp|Y1640_METAR|UPF0597 protein UNCMA_16400|Methanocella arvoryzae (strain DSM 22066

Query: 1 ATLKDDYT 8
A ++DDYT
Sbjct: 138 AVIRDDYT 145


>sp|Y1804_AERPE|UNCHARACTERIZED protein APE_1804|Aeropyrum pernix (strain ATCC 700893

Query: 2 TLKDDYT 8
TLKDDY+
Sbjct: 161 TLKDDYS 167


>sp|FSX1_NATA2|FUSEXIN 1|Natrinema altunense (strain JCM 12890

Query: 5 DDYTQR 10
DDYTQR
Sbjct: 158 DDYTQR 163


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 TLKDDYTQ 9
TLKDDY +
Sbjct: 150 TLKDDYIE 157


>sp|Y1067_METMP|UNCHARACTERIZED iron-sulfur protein MMP1067|Methanococcus maripaludis (strain DSM

Query: 1 ATLKDDYTQR 10
+TLK+DY ++
Sbjct: 345 STLKNDYKEK 354


>sp|GATD_PYRHO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrococcus horikoshii (strain ATCC

Query: 3 LKDDYTQR 10
L+DDY +R
Sbjct: 285 LRDDYRRR 292


>sp|GATD_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Aeropyrum pernix (strain ATCC 700893

Query: 3 LKDDYTQR 10
L+DDY +R
Sbjct: 270 LRDDYRRR 277


>sp|Y1276_AERPE|UNCHARACTERIZED protein APE_1276|Aeropyrum pernix (strain ATCC 700893

Query: 2 TLKDDYT 8
TLKDDY+
Sbjct: 114 TLKDDYS 120


>sp|GATD_PYRFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LKDDYTQR 10
L+DDY +R
Sbjct: 285 LRDDYRKR 292


>sp|AGL16_SULAC|ARCHAEAL glycosylation protein 16|Sulfolobus acidocaldarius (strain ATCC

Query: 2 TLKDDYTQR 10
T +D YT+R
Sbjct: 40 TTRDTYTER 48


>sp|RRP42_METMA|EXOSOME complex component Rrp42|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ATLKDDY 7
ATLK DY
Sbjct: 9 ATLKKDY 15


>sp|RRP42_METAC|EXOSOME complex component Rrp42|Methanosarcina acetivorans (strain ATCC

Query: 1 ATLKDDY 7
ATLK DY
Sbjct: 9 ATLKKDY 15


>sp|TFRB_METTM|FUMARATE reductase (CoM/CoB) subunit B|Methanothermobacter marburgensis

Query: 1 ATLKDDY 7
ATLK DY
Sbjct: 339 ATLKKDY 345


>sp|GATD_THEKO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermococcus kodakarensis (strain ATCC

Query: 3 LKDDYTQR 10
L+DDY +R
Sbjct: 287 LRDDYRKR 294


>sp|RL14_NANEQ|LARGE ribosomal subunit protein uL14|Nanoarchaeum equitans (strain

Query: 1 ATLKDDY 7
A LKDDY
Sbjct: 96 ALLKDDY 102


>sp|CAS1D_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 KDDYTQ 9
KDD+TQ
Sbjct: 278 KDDFTQ 283


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 TLKDDYTQR 10
+LK DY Q+
Sbjct: 1005 SLKSDYNQK 1013


>sp|SRP54_METBU|SIGNAL recognition particle 54 kDa|Methanococcoides burtonii (strain DSM

Query: 2 TLKDDYTQ 9
TLKD Y+Q
Sbjct: 321 TLKDMYSQ 328




17|SequenceR|90|81|LDSEVATLKD

>sp|PGK2_METAC|PHOSPHOGLYCERATE kinase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LDSEVATLKD 10
+ S +ATLKD
Sbjct: 45 IKSHIATLKD 54


>sp|ARLY_METMA|ARGININOSUCCINATE lyase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 EVATLKD 10
E+ATLKD
Sbjct: 466 EIATLKD 472


>sp|ARLY_METBF|ARGININOSUCCINATE lyase|Methanosarcina barkeri (strain Fusaro /

Query: 4 EVATLKD 10
E+ATLKD
Sbjct: 466 EIATLKD 472


>sp|PGK_METMA|PHOSPHOGLYCERATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LDSEVATLKD 10
+ S +ATLKD
Sbjct: 45 IRSHIATLKD 54


>sp|METK_PYRFU|S-ADENOSYLMETHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LDSEVATLKD 10
+DSEVAT K+
Sbjct: 219 VDSEVATPKE 228


>sp|ARLY_METAC|ARGININOSUCCINATE lyase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DSEVATLKD 10
+ E+AT+KD
Sbjct: 464 EQEIATIKD 472


>sp|RS7_METM6|SMALL ribosomal subunit protein uS7|Methanococcus maripaludis (strain

Query: 2 DSEVATLKD 10
DSE T+KD
Sbjct: 10 DSETVTVKD 18


>sp|RS7_METM7|SMALL ribosomal subunit protein uS7|Methanococcus maripaludis (strain

Query: 2 DSEVATLKD 10
DSE T+KD
Sbjct: 10 DSETVTVKD 18


>sp|RS7_METM5|SMALL ribosomal subunit protein uS7|Methanococcus maripaludis (strain

Query: 2 DSEVATLKD 10
DSE T+KD
Sbjct: 10 DSETVTVKD 18




18|SequenceR|95|86|DGLKKLDSEV

>sp|G6PI_HALWD|PROBABLE glucose-6-phosphate isomerase|Haloquadratum walsbyi (strain DSM

Query: 1 DGLKKLDSEV 10
DGL++LD V
Sbjct: 18 DGLERLDERV 27


>sp|RL30_PICTO|LARGE ribosomal subunit protein uL30|Picrophilus torridus (strain ATCC

Query: 2 GLKKLDSE 9
G KKLDSE
Sbjct: 74 GRKKLDSE 81


>sp|ATGT_METBF|TRNA-GUANINE(15) transglycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DGLKKL 6
DGLKKL
Sbjct: 339 DGLKKL 344


>sp|MBLFP_SULTO|METALLO-BETA-LACTAMASE fold-containing protein ST1585|Sulfurisphaera tokodaii (strain

Query: 1 DGLKKLD 7
DGLKKL+
Sbjct: 92 DGLKKLN 98


>sp|Y1626_METJA|UNCHARACTERIZED protein MJ1626|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LKKLDSEV 10
LK+LD+EV
Sbjct: 126 LKRLDNEV 133


>sp|Y078_METJA|UNCHARACTERIZED protein MJ0078|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LKKLDSEV 10
+KKLD+EV
Sbjct: 133 IKKLDNEV 140




19|SequenceR|100|91|KKGTQDGLKK

>sp|DAPA_METMP|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KGTQDGLKK 10
K TQ+GLK+
Sbjct: 107 KPTQEGLKR 115


>sp|DAPA_METM5|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C5 /

Query: 2 KGTQDGLKK 10
K TQ+GLK+
Sbjct: 107 KPTQEGLKR 115


>sp|DAPA_METJA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KGTQDGLKK 10
K TQ+GL+K
Sbjct: 108 KPTQEGLRK 116


>sp|DAPA_META3|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 KGTQDGLKK 10
K TQ+GLK+
Sbjct: 107 KPTQEGLKQ 115


>sp|Y640_METJA|UNCHARACTERIZED protein MJ0640|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KGTQDGLKK 10
KG +DG+KK
Sbjct: 117 KGVKDGVKK 125




20|SequenceR|105|96|NTSIAKKGTQ

>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 TSIAKKGTQ 10
TS+ KKG Q
Sbjct: 333 TSLMKKGIQ 341


>sp|WTPA_PYRFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NTSIAKKGTQ 10
NT+I GTQ
Sbjct: 189 NTNIYSNGTQ 198




21|SequenceR|110|101|TSLESNTSIA

***** No hits found ******


22|SequenceR|115|106|IDSRFTSLES

>sp|PRNK_PYRAB|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PYRAB01840|Pyrococcus abyssi (strain GE5 /

Query: 1 IDSRFTSLE 9
+DS FTSL+
Sbjct: 83 VDSHFTSLD 91


>sp|PURP_CENSY|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Cenarchaeum symbiosum (strain A)

Query: 2 DSRFTSLE 9
D RFTS E
Sbjct: 283 DGRFTSFE 290




23|SequenceR|120|111|QRLDLIDSRF

>sp|RS8E_HALMA|SMALL ribosomal subunit protein eS8|Haloarcula marismortui (strain ATCC

Query: 1 QRLDLIDSR 9
QRL +DSR
Sbjct: 39 QRLKTVDSR 47




24|SequenceR|125|116|IERLQQRLDL

>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 IERLQQRLDL 10
IERL+ RLDL
Sbjct: 1068 IERLEDRLDL 1077


>sp|MTRA2_METRM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanobrevibacter ruminantium

Query: 1 IERLQQRLDL 10
+ER QQ+L+L
Sbjct: 123 VERFQQQLEL 132


>sp|MTRA_METEZ|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanohalobium evestigatum (strain

Query: 1 IERLQQRLD 9
+ERLQQ+L+
Sbjct: 122 VERLQQQLE 130


>sp|CCA_HALSA|CCA-ADDING enzyme|Halobacterium salinarum (strain ATCC 700922

Query: 1 IERLQQRLD 9
IER++QR+D
Sbjct: 8 IERVRQRVD 16


>sp|CCA_HALS3|CCA-ADDING enzyme|Halobacterium salinarum (strain ATCC 29341

Query: 1 IERLQQRLD 9
IER++QR+D
Sbjct: 8 IERVRQRVD 16


>sp|Y665_METJA|UNCHARACTERIZED protein MJ0665|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IERLQQRLD 9
IE+LQ+R+D
Sbjct: 212 IEKLQKRID 220


>sp|MTRA1_METRM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 1|Methanobrevibacter ruminantium

Query: 1 IERLQQRLDL 10
+ER QQ+++L
Sbjct: 123 VERFQQQVEL 132


>sp|MUTL_HALSA|DNA mismatch repair protein MutL|Halobacterium salinarum (strain ATCC

Query: 2 ERLQQRLD 9
ERLQ R+D
Sbjct: 495 ERLQARVD 502


>sp|MUTL_HALS3|DNA mismatch repair protein MutL|Halobacterium salinarum (strain ATCC

Query: 2 ERLQQRLD 9
ERLQ R+D
Sbjct: 495 ERLQARVD 502


>sp|PDXS_PICTO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Picrophilus torridus (strain

Query: 1 IERLQQR 7
IERLQ+R
Sbjct: 328 IERLQER 334


>sp|IDI2_PYRFU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ERLQQRLDL 10
E L+QR+DL
Sbjct: 354 EWLEQRIDL 362


>sp|AROC_METMA|CHORISMATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IERLQQRLDL 10
I +LQQ +DL
Sbjct: 305 ISKLQQTVDL 314


>sp|RL13_THEAC|LARGE ribosomal subunit protein uL13|Thermoplasma acidophilum (strain

Query: 1 IERLQQRLDL 10
IE+ ++RLD+
Sbjct: 46 IEKFKERLDI 55


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 IERLQQRL 8
IER+ QRL
Sbjct: 791 IERMSQRL 798


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 1 IERLQQRLDL 10
+ER +Q LDL
Sbjct: 1003 LERNEQELDL 1012


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IERLQQRLDL 10
+E+L+++LDL
Sbjct: 115 LEKLKEKLDL 124


>sp|ENO_HALLT|ENOLASE lacusprofundi (strain ATCC 49239

Query: 1 IERLQQRLD 9
+ERLQ+ +D
Sbjct: 308 VERLQEGID 316


>sp|IDI2_THESM|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus sibiricus (strain DSM 12597

Query: 2 ERLQQRLDL 10
E L+QR+DL
Sbjct: 357 EWLEQRIDL 365


>sp|TFE_CENSY|TRANSCRIPTION factor E|Cenarchaeum symbiosum (strain A)

Query: 3 RLQQRLD 9
RLQQRLD
Sbjct: 101 RLQQRLD 107


>sp|RL13_THEVO|LARGE ribosomal subunit protein uL13|Thermoplasma volcanium (strain

Query: 1 IERLQQRLDL 10
I++ +QRLD+
Sbjct: 46 IDKFKQRLDI 55


>sp|IDI2_THEON|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus onnurineus (strain NA1)

Query: 2 ERLQQRLDL 10
E L+QR+DL
Sbjct: 357 EWLEQRIDL 365


>sp|IDI2_THEKO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 ERLQQRLDL 10
E L+QR+DL
Sbjct: 357 EWLEQRIDL 365


>sp|RL18_PICTO|LARGE ribosomal subunit protein uL18|Picrophilus torridus (strain ATCC

Query: 2 ERLQQRLDL 10
E L+QRLD+
Sbjct: 141 EHLKQRLDI 149




25|SequenceR|130|121|STKETIERLQ

>sp|DNAG_PYRAR|DNA primase DnaG|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 STKETIERLQ 10
TKE IERL+
Sbjct: 137 DTKEIIERLK 146


>sp|DNAG_PYRIL|DNA primase DnaG|Pyrobaculum islandicum (strain DSM 4184

Query: 1 STKETIERLQ 10
TKE IERL+
Sbjct: 137 DTKEIIERLK 146


>sp|LIPA_NATPD|LIPOYL synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 ETIERLQ 10
ET+ERLQ
Sbjct: 168 ETVERLQ 174


>sp|MTRA_METEZ|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanohalobium evestigatum (strain

Query: 2 TKETIERLQ 10
T+E++ERLQ
Sbjct: 118 TEESVERLQ 126


>sp|COFC_HALMA|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 TKETIERL 9
T+E+IERL
Sbjct: 98 TRESIERL 105


>sp|LIPA_HALLT|LIPOYL synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 ETIERLQ 10
ET+ERLQ
Sbjct: 168 ETVERLQ 174


>sp|DNAG_PYRNV|DNA primase DnaG|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 STKETIERLQ 10
TKE IE+L+
Sbjct: 137 DTKEIIEKLK 146


>sp|DNAG_PYRCJ|DNA primase DnaG|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 STKETIERLQ 10
TKE IE+L+
Sbjct: 137 DTKEIIEKLK 146


>sp|DNAG_PYRAE|DNA primase DnaG|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 STKETIERLQ 10
TKE IE+L+
Sbjct: 137 DTKEIIEKLK 146


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 4 ETIERLQ 10
ETIERL+
Sbjct: 11 ETIERLE 17




26|SequenceR|135|126|TDKNKSTKET

>sp|THIE_METAC|THIAMINE-PHOSPHATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DKNKSTKE 9
+KNKSTKE
Sbjct: 55 EKNKSTKE 62


>sp|AATB_CENSY|A-TYPE ATP synthase subunit B|Cenarchaeum symbiosum (strain A)

Query: 1 TDKNKSTKET 10
TD+N++ +ET
Sbjct: 421 TDENRTIEET 430


>sp|AATB_NITMS|A-TYPE ATP synthase subunit B|Nitrosopumilus maritimus (strain SCM1)

Query: 1 TDKNKSTKET 10
TD+N++ +ET
Sbjct: 421 TDENRTIEET 430




27|SequenceR|140|131|QLKELTDKNK

>sp|TRPB_THEAC|TRYPTOPHAN synthase beta chain|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LKELTDKNK 10
LKE+ DKN+
Sbjct: 388 LKEIADKNR 396


>sp|ARLY_META3|ARGININOSUCCINATE lyase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 QLKELTDKN 9
++KELT+KN
Sbjct: 360 RMKELTEKN 368


>sp|HIS8_METAR|HISTIDINOL-PHOSPHATE aminotransferase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LKELTDKNK 10
LK++TD+ K
Sbjct: 149 LKQVTDRTK 157


>sp|CMR1A_PYRFU|CRISPR system Cmr subunit Cmr1-1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LKELTDKN 9
LKE DKN
Sbjct: 87 LKEFKDKN 94


>sp|TRPB_THEVO|TRYPTOPHAN synthase beta chain|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LKELTDKNK 10
LKE+ D N+
Sbjct: 388 LKEIADSNR 396


>sp|SYH_SULAC|HISTIDINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LKELTDKN 9
LKE TD N
Sbjct: 197 LKEFTDNN 204


>sp|Y063_METJA|UNCHARACTERIZED protein MJ0063|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LKELTDK 8
LKE+TDK
Sbjct: 117 LKEITDK 123


>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 2 LKELTDKN 9
LKE+ DKN
Sbjct: 121 LKEMLDKN 128




28|SequenceR|145|136|ADGSAQLKEL

>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ADGSAQLKEL 10
ADGSA K+L
Sbjct: 905 ADGSALRKQL 914


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ADGSAQLKEL 10
ADG L+EL
Sbjct: 1580 ADGEKSLREL 1589




29|SequenceR|150|141|QRDVLADGSA

>sp|LIPA_SULAC|LIPOYL synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RDVLADGSA 10
RD LADG A
Sbjct: 99 RDDLADGGA 107


>sp|LEU3_METJA|3-ISOPROPYLMALATE/3-METHYLMALATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DVLADGSA 10
D+L+DG+A
Sbjct: 227 DILSDGAA 234


>sp|RTCB_THEKO|TRNA-SPLICING ligase RtcB|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 DVLADGS 9
DVLADG+
Sbjct: 148 DVLADGA 154


>sp|HBCAL_NITMS|4-HYDROXYBUTYRATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 2 RDVLADGS 9
R++LADG+
Sbjct: 422 REILADGN 429


>sp|MCH_HALSA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 1 QRDVLADG 8
+ DVLADG
Sbjct: 300 REDVLADG 307


>sp|MCH_HALS3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 1 QRDVLADG 8
+ DVLADG
Sbjct: 300 REDVLADG 307




30|SequenceR|155|146|EKLQSQRDVL

>sp|COMB_THEAC|PROBABLE 2-phosphosulfolactate phosphatase|Thermoplasma acidophilum (strain

Query: 3 LQSQRDVL 10
++SQRDVL
Sbjct: 126 IRSQRDVL 133


>sp|AATE_HALLT|A-TYPE ATP synthase subunit E|Halorubrum lacusprofundi (strain ATCC

Query: 1 EKLQSQRDVL 10
E+L ++RDVL
Sbjct: 73 ERLGARRDVL 82




31|SequenceR|160|151|NNELTEKLQS

>sp|HIS1_PYRCJ|ATP phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 1 NNELTEKLQS 10
N+ELT+KL +
Sbjct: 190 NHELTKKLTT 199


>sp|T1R1_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 NNELTEKL 8
NNEL EKL
Sbjct: 783 NNELKEKL 790


>sp|HIS1_PYRIL|ATP phosphoribosyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 NNELTEKL 8
N+ELT+KL
Sbjct: 190 NHELTKKL 197


>sp|SYR_METMP|ARGININE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 NELTEKLQ 9
NELTEK +
Sbjct: 225 NELTEKFK 232


>sp|SYR_METM5|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 NELTEKLQ 9
NELTEK +
Sbjct: 225 NELTEKFK 232


>sp|SYR_METM6|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 NELTEKLQ 9
NELTEK +
Sbjct: 225 NELTEKFK 232


>sp|SYR_METM7|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 NELTEKLQ 9
NELTEK +
Sbjct: 225 NELTEKFK 232


>sp|RL10_SULAC|LARGE ribosomal subunit protein uL10|Sulfolobus acidocaldarius (strain

Query: 3 ELTEKLQS 10
ELTEKL++
Sbjct: 22 ELTEKLKT 29


>sp|GATC_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit C|Sulfurisphaera tokodaii (strain DSM

Query: 1 NNELTEKLQS 10
NNEL +LQ+
Sbjct: 6 NNELISRLQN 15




32|SequenceR|165|156|TILFSNNELT

>sp|RFCL_METS3|REPLICATION factor C large subunit|Methanobrevibacter smithii (strain ATCC

Query: 2 ILFSNNEL 9
I+F NNEL
Sbjct: 372 IMFENNEL 379


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TILFSNNELT 10
TILF N EL+
Sbjct: 393 TILFGNIELS 402


>sp|Y453_METLZ|UPF0280 protein Mlab_0453|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 ILFSNNEL 9
+LFSN EL
Sbjct: 111 VLFSNREL 118


>sp|ISCS_METTE|CYSTEINE desulfurase IscS|Methanosarcina thermophila

Query: 1 TILFSNNEL 9
+I+F+NNE+
Sbjct: 159 SIMFANNEI 167


>sp|DPCKG_METS5|GTP-DEPENDENT dephospho-CoA kinase|Metallosphaera sedula (strain ATCC 51363

Query: 2 ILFSNN 7
ILFSNN
Sbjct: 29 ILFSNN 34


>sp|DPCKG_SACI2|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 ILFSNNEL 9
ILF+NN+L
Sbjct: 28 ILFTNNKL 35


>sp|DPCKG_SACI1|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 ILFSNNEL 9
ILF+NN+L
Sbjct: 28 ILFTNNKL 35


>sp|DPCKG_SACI7|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 ILFSNNEL 9
ILF+NN+L
Sbjct: 28 ILFTNNKL 35




33|SequenceR|170|161|TKNVTTILFS

>sp|RFCS_METMA|REPLICATION factor C small subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TKNVTTILFS 10
TKN+ +LFS
Sbjct: 43 TKNLPHLLFS 52


>sp|RFCS_METAC|REPLICATION factor C small subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 TKNVTTILFS 10
TKN+ +LFS
Sbjct: 43 TKNLPHLLFS 52


>sp|RFCS_METBF|REPLICATION factor C small subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 TKNVTTILFS 10
TKN+ +LFS
Sbjct: 39 TKNLPHLLFS 48




34|SequenceR|175|166|NYAQLTKNVT

>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 NYAQLTK 7
NYA+LTK
Sbjct: 478 NYAKLTK 484


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 NYAQLTKNV 9
NYA+ TK+V
Sbjct: 525 NYAEGTKDV 533


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 NYAQLTKNV 9
NYA+ TK+V
Sbjct: 525 NYAEGTKDV 533


>sp|COXX_AERPE|PROTOHEME IX farnesyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 YAQLTKNVT 10
Y QLTK T
Sbjct: 135 YTQLTKRFT 143


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 1 NYAQLTK 7
NYA++TK
Sbjct: 478 NYAKITK 484




35|SequenceR|180|171|NTVYGNYAQL

>sp|PURO_METKA|IMP cyclohydrolase|Methanopyrus kandleri (strain AV19 /

Query: 2 TVYGNYAQL 10
+VYG YA++
Sbjct: 147 SVYGEYAEV 155


>sp|IF5A_KORCO|TRANSLATION initiation factor 5A|Korarchaeum cryptofilum (strain OPF8)

Query: 3 VYGNYAQL 10
VYGN QL
Sbjct: 80 VYGNVVQL 87


>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 3 VYGNYAQ 9
VYG YA+
Sbjct: 582 VYGKYAE 588


>sp|G3PP_PYRFU|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 YGNYAQL 10
YG YA+L
Sbjct: 198 YGKYAEL 204




36|SequenceR|185|176|TDQQLNTVYG

>sp|CAPPA_SULAC|PHOSPHOENOLPYRUVATE carboxylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TDQQLNTVY 9
TDQ+LN ++
Sbjct: 405 TDQELNAIF 413


>sp|IDH_CALNO|ISOCITRATE dehydrogenase [NADP]|Caldococcus noboribetus

Query: 1 TDQQLNTVYG 10
T++++NT YG
Sbjct: 259 TEEEVNTKYG 268




37|SequenceR|190|181|GQLVSTDQQL

***** No hits found ******


38|SequenceR|195|186|QNQLNGQLVS

>sp|FOLD_METB6|BIFUNCTIONAL protein FolD|Methanoregula boonei (strain DSM 21154

Query: 2 NQLNGQLV 9
NQLNG+LV
Sbjct: 228 NQLNGKLV 235


>sp|FENR_SACS2|FERREDOXIN--NADP reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QNQLNGQLVS 10
Q++L GQLVS
Sbjct: 35 QDELGGQLVS 44


>sp|TTRC_ARCFU|TETRATHIONATE reductase subunit C|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LNGQLVS 10
+NGQL+S
Sbjct: 309 INGQLIS 315


>sp|FEN_CALMQ|FLAP endonuclease 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 QLNGQLVS 10
QLNG+L++
Sbjct: 22 QLNGKLIA 29




39|SequenceR|200|191|NHSYMQNQLN

>sp|FTHS_THEAC|FORMATE--TETRAHYDROFOLATE ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NHSYMQNQLN 10
NH Y N+LN
Sbjct: 132 NHMYHGNELN 141


>sp|FTHS_THEVO|FORMATE--TETRAHYDROFOLATE ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NHSYMQNQLN 10
NH Y N+LN
Sbjct: 132 NHIYHGNELN 141


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 2 HSYMQNQLN 10
HS+ QN +N
Sbjct: 360 HSFYQNSVN 368


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 2 HSYMQNQLN 10
HS+ QN +N
Sbjct: 360 HSFYQNSVN 368


>sp|GLYA_METST|SERINE hydroxymethyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 1 NHSYMQNQLN 10
+H++M+N LN
Sbjct: 17 HHNWMKNSLN 26


>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 NHSYMQNQL 9
NH++MQ +
Sbjct: 243 NHTFMQKDM 251




40|SequenceR|205|196|NMIVVNHSYM

>sp|MTHT_METTF|TYPE II methyltransferase M.MthTI|Methanothermobacter thermautotrophicus

Query: 1 NMIVVNHSYM 10
N+ V NH YM
Sbjct: 206 NLEVPNHEYM 215


>sp|SYE_METAR|GLUTAMATE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 IVVNHSY 9
I+VNH Y
Sbjct: 126 IIVNHEY 132


>sp|RS17_AERPE|SMALL ribosomal subunit protein uS17|Aeropyrum pernix (strain ATCC

Query: 2 MIVVNHSYM 10
M+VV H Y+
Sbjct: 52 MVVVQHVYL 60




41|SequenceR|210|201|NLNNLNMIVV

>sp|Y1418_SULTO|UPF0173 metal-dependent hydrolase STK_14180|Sulfurisphaera tokodaii

Query: 3 NNLNMIVV 10
NNLN+I+V
Sbjct: 42 NNLNLIIV 49


>sp|GLYA_METMA|SERINE hydroxymethyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NLNNLNM 7
NLNN+N+
Sbjct: 317 NLNNMNI 323


>sp|GLYA_METBF|SERINE hydroxymethyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NLNNLNM 7
NLNN+N+
Sbjct: 317 NLNNMNI 323


>sp|GLYA_METAC|SERINE hydroxymethyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 NLNNLNM 7
NLNN+N+
Sbjct: 317 NLNNMNI 323


>sp|RL4_PYRAE|LARGE ribosomal subunit protein uL4|Pyrobaculum aerophilum (strain ATCC

Query: 2 LNNLNMIVV 10
+NNLN++V+
Sbjct: 250 VNNLNILVL 258


>sp|RS5_META3|SMALL ribosomal subunit protein uS5|Methanococcus aeolicus (strain ATCC

Query: 1 NLNNLNMI 8
+LNNLN +
Sbjct: 197 SLNNLNFV 204




42|SequenceR|215|206|QVQTLNLNNL

>sp|MRE11_SULTO|DNA double-strand break repair protein|Sulfurisphaera tokodaii (strain

Query: 2 VQTLNLNNL 10
V TLN NNL
Sbjct: 253 VVTLNTNNL 261


>sp|KDGA_SULAC|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QVQTLNLNNL 10
QV +LNLN++
Sbjct: 71 QVGSLNLNDV 80




43|SequenceR|220|211|ILNRQQVQTL

***** No hits found ******


44|SequenceR|225|216|RQLNTILNRQ

>sp|GLPA2_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A2|Haloferax volcanii

Query: 1 RQLNTILNR 9
RQL+T++NR
Sbjct: 241 RQLDTVINR 249


>sp|TOP6B_METBU|TYPE 2 DNA topoisomerase 6|Methanococcoides burtonii (strain DSM 6242

Query: 1 RQLNTILNRQ 10
R+LN LNRQ
Sbjct: 457 RKLNRYLNRQ 466


>sp|GLPA1_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A1|Haloferax volcanii

Query: 1 RQLNTILNR 9
RQ++T++NR
Sbjct: 244 RQVDTVVNR 252




45|SequenceR|230|221|TDDVSRQLNT

>sp|SYFA_SULTO|PHENYLALANINE--TRNA ligase alpha subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DDVSRQLN 9
+D+S+QLN
Sbjct: 22 EDISKQLN 29


>sp|EF2_METRM|ELONGATION factor 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 2 DDVSRQLNT 10
DD+ RQ+ T
Sbjct: 707 DDIVRQIRT 715




46|SequenceR|235|226|QIAQSTDDVS

>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QIAQSTDDV 9
+IAQ TDDV
Sbjct: 545 EIAQLTDDV 553




47|SequenceR|240|231|DNKIRQIAQS

>sp|RS2_METS3|SMALL ribosomal subunit protein uS2|Methanobrevibacter smithii (strain

Query: 1 DNKIRQIAQ 9
D +IRQIA+
Sbjct: 48 DERIRQIAK 56


>sp|RS10_PYRHO|SMALL ribosomal subunit protein uS10|Pyrococcus horikoshii (strain ATCC

Query: 2 NKIRQIAQ 9
N+IRQIA+
Sbjct: 21 NQIRQIAE 28




48|SequenceR|245|236|QLNQFDNKIR

>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 QLNQFDNKIR 10
+LNQF ++IR
Sbjct: 191 RLNQFQDEIR 200


>sp|GLNA_PYRWO|GLUTAMINE synthetase|Pyrococcus woesei

Query: 2 LNQFDNKIR 10
+N+FD+KI+
Sbjct: 7 MNKFDSKIK 15


>sp|GLNA_PYRFU|GLUTAMINE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LNQFDNKIR 10
+N+FD+KI+
Sbjct: 7 MNKFDSKIK 15


>sp|FLPA_HALWD|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Haloquadratum walsbyi (strain

Query: 1 QLNQFDNKIR 10
Q QFDN+ R
Sbjct: 12 QRRQFDNRSR 21


>sp|ADHS2_ARCFU|PUTATIVE 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase

Query: 2 LNQFDNK 8
+NQFD K
Sbjct: 153 INQFDEK 159


>sp|GCH3_NATPD|GTP cyclohydrolase III|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QLNQFDNKI 9
QLN+FD+ I
Sbjct: 154 QLNEFDSFI 162




49|SequenceR|250|241|QLFVQQLNQF

>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QLFVQQLNQ 9
Q+F+ +LNQ
Sbjct: 321 QMFIYELNQ 329


>sp|VOLA_HALVD|VOLACTIN volcanii (strain ATCC 29605

Query: 2 LFVQQLNQF 10
+FVQQ N F
Sbjct: 23 VFVQQRNSF 31




50|SequenceR|255|246|TDKKAQLFVQ

>sp|UVRC_METMA|UVRABC system protein C|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DKKAQLFVQ 10
D+KA LFVQ
Sbjct: 490 DEKASLFVQ 498


>sp|PUS10_KORCO|TRNA pseudouridine synthase Pus10|Korarchaeum cryptofilum (strain OPF8)

Query: 2 DKKAQLFV 9
DKK +LFV
Sbjct: 322 DKKFELFV 329


>sp|DPCKG_METBU|GTP-DEPENDENT dephospho-CoA kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 TDKKAQLFVQ 10
+DK ++FVQ
Sbjct: 109 SDKNVRIFVQ 118




51|SequenceR|260|251|EKLWDTDKKA

>sp|SPEH_META3|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus aeolicus (strain ATCC

Query: 2 KLWDTDKKA 10
+LWD DK+A
Sbjct: 11 ELWDCDKQA 19


>sp|Y1890_THEKO|UNCHARACTERIZED protein TK1890|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LWDTDKK 9
+WD DKK
Sbjct: 97 IWDEDKK 103


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 2 KLWDTDKKA 10
K WD+D A
Sbjct: 106 KFWDSDGMA 114


>sp|PURP_IGNH4|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 LWDTDKK 9
LW++D+K
Sbjct: 116 LWESDQK 122


>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EKLWDTDK 8
EK+WD D+
Sbjct: 428 EKVWDVDE 435


>sp|DHYS_METKA|PROBABLE deoxyhypusine synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 EKLWDTD 7
EK+W +D
Sbjct: 40 EKMWSSD 46


>sp|LEUC_CALMQ|3-ISOPROPYLMALATE dehydratase large subunit|Caldivirga maquilingensis (strain ATCC

Query: 2 KLWDTDK 8
K+WD D+
Sbjct: 52 KVWDLDR 58


>sp|Y1536_PYRFU|UNCHARACTERIZED protein PF1536|Pyrococcus furiosus (strain ATCC 43587

Query: 4 WDTDKKA 10
WD DKK+
Sbjct: 96 WDEDKKS 102


>sp|Y2205_ARCFU|UNCHARACTERIZED protein AF_2205|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 WDTDKKA 10
WD +K+A
Sbjct: 413 WDAEKRA 419


>sp|COABC_THEKO|COENZYME A biosynthesis bifunctional protein|Thermococcus kodakarensis

Query: 1 EKLWDTDKK 9
E+LWD +K
Sbjct: 393 ERLWDEIEK 401


>sp|Y1349_METJA|UNCHARACTERIZED protein MJ1349|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EKLWDTDK 8
E++WDT++
Sbjct: 12 EEVWDTNR 19


>sp|CBIA_METVS|COBYRINATE a,c-diamide synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EKLWDTDKKA 10
E LW DK +
Sbjct: 241 ETLWKVDKNS 250




52|SequenceR|265|256|LSQVKEKLWD

>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LSQVKEKLWD 10
L +KEK+WD
Sbjct: 452 LINIKEKIWD 461


>sp|RAD50_PYRFU|DNA double-strand break repair Rad50|Pyrococcus furiosus (strain ATCC

Query: 1 LSQVKEKLWD 10
L Q+KEKL D
Sbjct: 380 LRQLKEKLGD 389


>sp|RFCS_METAC|REPLICATION factor C small subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 SQVKEKLW 9
S++KE++W
Sbjct: 8 SKIKEEIW 15


>sp|CAPPA_PICTO|PHOSPHOENOLPYRUVATE carboxylase|Picrophilus torridus (strain ATCC 700027

Query: 4 VKEKLWD 10
+KE +WD
Sbjct: 47 IKEVMWD 53


>sp|ARGDC_HYPBU|ARGININE decarboxylase proenzyme|Hyperthermus butylicus (strain DSM 5456

Query: 5 KEKLWD 10
+EKLWD
Sbjct: 33 EEKLWD 38


>sp|TYW1_METJA|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Methanocaldococcus jannaschii

Query: 1 LSQVKEKLWD 10
+SQ+KE W+
Sbjct: 81 ISQIKEPKWE 90


>sp|RFCS_METBF|REPLICATION factor C small subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 SQVKEKLW 9
S +KE++W
Sbjct: 4 STIKEEIW 11




53|SequenceR|270|261|AALTQLSQVK

>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain ATCC

Query: 2 ALTQLSQVK 10
ALTQLS+++
Sbjct: 1088 ALTQLSKLR 1096




54|SequenceR|275|266|LASNNAALTQ

***** No hits found ******


55|SequenceR|280|271|NNAKALASNN

***** No hits found ******


56|SequenceR|285|276|DELTDNNAKA

>sp|DNAG_STAMF|DNA primase DnaG|Staphylothermus marinus (strain ATCC 43588

Query: 1 DELTDNNAKA 10
DEL +NN +A
Sbjct: 368 DELDENNVQA 377


>sp|RRP41_HYPBU|EXOSOME complex component Rrp41|Hyperthermus butylicus (strain DSM 5456

Query: 1 DELTDNNAKA 10
DE+ DN A+A
Sbjct: 184 DEIEDNYAEA 193




57|SequenceR|290|281|LQSNMDELTD

>sp|NTPTH_METKA|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Methanopyrus kandleri (strain AV19 /

Query: 3 SNMDELTD 10
SN DEL+D
Sbjct: 160 SNRDELSD 167


>sp|MTAP_NITMS|S-METHYL-5'-THIOADENOSINE phosphorylase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 LQSNMDELTD 10
LQS++ E+TD
Sbjct: 138 LQSSITEVTD 147


>sp|PUR2_METJA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LQSNMDELTD 10
L+S +DELT+
Sbjct: 133 LESFIDELTE 142


>sp|COBQ_METVS|PROBABLE cobyric acid synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LQSNMDELT 9
LQ NMD+L+
Sbjct: 470 LQENMDKLS 478


>sp|THSB_SULTO|CHAPERONIN subunit beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 SNMDELT 9
SN+DELT
Sbjct: 341 SNIDELT 347


>sp|THSB_SACS2|CHAPERONIN subunit beta|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 SNMDELT 9
SN+DELT
Sbjct: 340 SNIDELT 346


>sp|THSB_SACSH|CHAPERONIN subunit beta|Saccharolobus shibatae (strain ATCC 51178

Query: 3 SNMDELT 9
SN+DELT
Sbjct: 340 SNIDELT 346


>sp|THSB_SULAC|CHAPERONIN subunit beta|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 SNMDELT 9
SN+DELT
Sbjct: 341 SNIDELT 347




58|SequenceR|295|286|GTFSNLQSNM

>sp|ENO_THEAC|ENOLASE acidophilum (strain ATCC 25905

Query: 1 GTFSNLQSNM 10
G FSNL N+
Sbjct: 93 GNFSNLGGNL 102


>sp|ENO_THEVO|ENOLASE volcanium (strain ATCC 51530

Query: 1 GTFSNLQSNM 10
G FSNL N+
Sbjct: 93 GNFSNLGGNL 102




59|SequenceR|300|291|INEMQGTFSN

>sp|HMGCS_METKA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 INEMQGTFS 9
+ EM+GT+S
Sbjct: 174 VAEMEGTYS 182


>sp|SYS_METMA|SERINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 INEMQGTFS 9
INEMQG S
Sbjct: 73 INEMQGINS 81


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 3 EMQGTFSN 10
E +GTF+N
Sbjct: 442 EQEGTFTN 449


>sp|RFHPS_METTH|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Methanothermobacter thermautotrophicus

Query: 1 INEMQGT 7
+NE+QGT
Sbjct: 247 VNEIQGT 253


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 3 EMQGTFSN 10
E GTFSN
Sbjct: 438 EKDGTFSN 445




60|SequenceR|305|296|QSITTINEMQ

***** No hits found ******


61|SequenceR|310|301|NQENAQSITT

>sp|THII_SACI4|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 NQENAQSITT 10
++ NA+SITT
Sbjct: 268 DKANAKSITT 277


>sp|THII_SACI7|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 NQENAQSITT 10
++ NA+SITT
Sbjct: 268 DKANAKSITT 277


>sp|THII_SACI6|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 NQENAQSITT 10
++ NA+SITT
Sbjct: 268 DKANAKSITT 277


>sp|THII_SACI1|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 NQENAQSITT 10
++ NA+SITT
Sbjct: 268 DKANAKSITT 277


>sp|THII_SACI2|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 NQENAQSITT 10
++ NA+SITT
Sbjct: 268 DKANAKSITT 277




62|SequenceR|315|306|QLDKLNQENA

>sp|MUTS1_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 LDKLNQENA 10
LD+L +ENA
Sbjct: 793 LDRLREENA 801


>sp|MUTS1_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 LDKLNQENA 10
LD+L +ENA
Sbjct: 793 LDRLREENA 801


>sp|Y1357_HALVD|PUTATIVE transcriptional regulator HVO_1357|Haloferax volcanii (strain ATCC

Query: 1 QLDKLNQEN 9
QLD+LN+ N
Sbjct: 189 QLDRLNRTN 197


>sp|CUTA_THEKO|DIVALENT-CATION tolerance protein CutA|Thermococcus kodakarensis (strain ATCC

Query: 2 LDKLNQE 8
LDKLN+E
Sbjct: 87 LDKLNRE 93


>sp|Y700_METJA|UNCHARACTERIZED MscS family protein MJ0700|Methanocaldococcus jannaschii (strain

Query: 2 LDKLNQEN 9
L+K+N+EN
Sbjct: 295 LEKVNKEN 302


>sp|SERK_DESM0|ATP-DEPENDENT L-serine kinase|Desulfurococcus mucosus (strain ATCC 35584

Query: 2 LDKLNQENA 10
+DK+ ENA
Sbjct: 47 MDKIRSENA 55




63|SequenceR|320|311|DKHLDQLDKL

>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 DKHLDQLDKL 10
+KHL++LD++
Sbjct: 208 EKHLEELDRI 217


>sp|SECF_METJA|PROTEIN-EXPORT membrane protein SecF|Methanocaldococcus jannaschii (strain ATCC

Query: 3 HLDQLDKL 10
H+D LDKL
Sbjct: 95 HVDSLDKL 102


>sp|RL15_PYRFU|LARGE ribosomal subunit protein uL15|Pyrococcus furiosus (strain ATCC

Query: 1 DKHLDQLDKL 10
D+HLD+L ++
Sbjct: 82 DEHLDELMQM 91


>sp|LEUC_METS5|3-ISOPROPYLMALATE dehydratase large subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 DKHLDQLDKL 10
D+H +LDKL
Sbjct: 256 DEHTIELDKL 265


>sp|ILVD_METKA|DIHYDROXY-ACID dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 1 DKHLDQLD 8
D HLD++D
Sbjct: 330 DLHLDRID 337


>sp|RL14E_STAMF|LARGE ribosomal subunit protein eL14|Staphylothermus marinus (strain

Query: 2 KHLDQLDKL 10
KH++ LDK+
Sbjct: 52 KHIEPLDKV 60


>sp|RADA_CENSY|DNA repair and recombination protein|Cenarchaeum symbiosum (strain A)

Query: 1 DKHLDQLD 8
++HL QLD
Sbjct: 322 EEHLKQLD 329


>sp|RL14E_IGNH4|LARGE ribosomal subunit protein eL14|Ignicoccus hospitalis (strain

Query: 2 KHLDQLDK 9
KHL+ LDK
Sbjct: 52 KHLEPLDK 59


>sp|PGK_HALSA|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DKHLDQLDKL 10
++H D+LD L
Sbjct: 73 ERHADRLDAL 82


>sp|PGK_HALS3|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DKHLDQLDKL 10
++H D+LD L
Sbjct: 73 ERHADRLDAL 82


>sp|AROE_METJA|SHIKIMATE dehydrogenase (NADP(+))|Methanocaldococcus jannaschii (strain

Query: 2 KHLDQLDK 9
K+LD++DK
Sbjct: 75 KYLDEIDK 82


>sp|MCRD_METJA|METHYL-COENZYME M reductase I operon|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DKHLDQLDKL 10
D LD+LD++
Sbjct: 87 DSELDKLDEI 96




64|SequenceR|325|316|TRNEADKHLD

>sp|VHUG_METVO|F420-NON-REDUCING hydrogenase vhu subunit G|Methanococcus voltae

Query: 2 RNEADKHL 9
RNE D+HL
Sbjct: 63 RNEHDEHL 70


>sp|VHUG_METJA|F420-NON-REDUCING hydrogenase vhu subunit G|Methanocaldococcus jannaschii (strain

Query: 2 RNEADKHL 9
RNE D+HL
Sbjct: 65 RNEHDEHL 72


>sp|PGP_METS3|PHOSPHOGLYCOLATE phosphatase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 NEADKHL 9
N ADKHL
Sbjct: 91 NAADKHL 97


>sp|URE1_NATPD|UREASE subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 TRNEADKHLD 10
T N D+HLD
Sbjct: 307 TENTFDEHLD 316




65|SequenceR|330|321|NFKIATRNEA

>sp|COFG_METVS|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 NFKIATRNE 9
NFKI T+NE
Sbjct: 62 NFKIMTKNE 70


>sp|SYE_METJA|GLUTAMATE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NFKIATRNEA 10
+FKIA +N+A
Sbjct: 478 DFKIARKNKA 487


>sp|GUAAA_PYRAB|GMP synthase [glutamine-hydrolyzing] subunit A|Pyrococcus abyssi

Query: 1 NFKIATRNE 9
NFK+ R+E
Sbjct: 137 NFKVLARSE 145


>sp|ACDB2_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 3 KIATRNEA 10
KIAT N+A
Sbjct: 373 KIATENDA 380


>sp|ACDB2_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 3 KIATRNEA 10
KIAT N+A
Sbjct: 372 KIATENDA 379


>sp|ACDB1_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 3 KIATRNEA 10
KIAT N+A
Sbjct: 372 KIATENDA 379


>sp|ACDB1_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 3 KIATRNEA 10
KIAT N+A
Sbjct: 372 KIATENDA 379


>sp|MTAD_THESM|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus sibiricus (strain DSM 12597

Query: 2 FKIATRNEA 10
FK+AT+N A
Sbjct: 333 FKMATQNGA 341


>sp|WECB_METJA|UDP-N-ACETYLGLUCOSAMINE 2-epimerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NFKIATRNE 9
N KIA +NE
Sbjct: 178 NLKIAEKNE 186


>sp|WECB_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NFKIATRNE 9
N KIA +NE
Sbjct: 177 NLKIAEKNE 185


>sp|SYE_META3|GLUTAMATE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 NFKIATRNEA 10
+FKIA N+A
Sbjct: 486 DFKIAKENKA 495




66|SequenceR|335|326|REELQNFKIA

>sp|IF6_METVS|TRANSLATION initiation factor 6|Methanococcus vannielii (strain ATCC 35089

Query: 2 EELQNFK 8
EELQNF+
Sbjct: 120 EELQNFR 126


>sp|Y1623_METJA|UNCHARACTERIZED protein MJ1623|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 REELQNF 7
REEL+NF
Sbjct: 415 REELKNF 421


>sp|PYRC_METJA|DIHYDROOROTASE jannaschii (strain ATCC 43067

Query: 1 REELQNFKI 9
R+EL+N KI
Sbjct: 241 RQELKNIKI 249


>sp|RPO11_NANEQ|DNA-DIRECTED RNA polymerase subunit Rpo11|Nanoarchaeum equitans (strain

Query: 1 REELQNFK 8
+EEL NFK
Sbjct: 82 KEELLNFK 89


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 1 REELQNFKI 9
REE N+KI
Sbjct: 8 REEFLNYKI 16


>sp|RNP3_METTH|RIBONUCLEASE P protein component 3|Methanothermobacter thermautotrophicus

Query: 3 ELQNFKIA 10
ELQ+F+IA
Sbjct: 62 ELQDFEIA 69




67|SequenceR|340|331|EFLQFREELQ

>sp|GLMS_METKA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanopyrus kandleri (strain AV19 /

Query: 2 FLQFREELQ 10
F+Q REEL+
Sbjct: 110 FMQLREELE 118




68|SequenceR|345|336|NVIDTEFLQF

>sp|NADB_SACS2|L-ASPARTATE oxidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VIDTEFLQF 10
V DTEF+QF
Sbjct: 202 VSDTEFVQF 210


>sp|NADB_HALSA|L-ASPARTATE oxidase|Halobacterium salinarum (strain ATCC 700922

Query: 1 NVIDTEFLQF 10
+V D E++QF
Sbjct: 225 DVTDAEYVQF 234


>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 1 NVIDTEFLQ 9
N+I T FLQ
Sbjct: 498 NIIKTGFLQ 506


>sp|AATB_METMA|A-TYPE ATP synthase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 DTEFLQF 10
DT+FL+F
Sbjct: 397 DTKFLEF 403


>sp|AATB_METAC|A-TYPE ATP synthase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 4 DTEFLQF 10
DT+FL+F
Sbjct: 397 DTKFLEF 403


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 NVIDTEFLQ 9
N+ID EF++
Sbjct: 229 NLIDKEFIK 237


>sp|T1S1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 1 NVIDTEFLQF 10
N++++EFL +
Sbjct: 123 NILESEFLYY 132




69|SequenceR|350|341|INSIINVIDT

>sp|RF1_METST|PEPTIDE chain release factor subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 NSIINVIDT 10
+ IIN++DT
Sbjct: 243 DKIINIVDT 251


>sp|EF2_HALMA|ELONGATION factor 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 NSIINVIDT 10
N +IN+IDT
Sbjct: 87 NHLINLIDT 95


>sp|GUAAB_SACS2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 INSIINVIDT 10
IN++ N+IDT
Sbjct: 280 INNVKNIIDT 289


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 2 NSIINVIDT 10
N +IN+IDT
Sbjct: 87 NHLINLIDT 95


>sp|EF2_NATPD|ELONGATION factor 2|Natronomonas pharaonis (strain ATCC 35678

Query: 2 NSIINVIDT 10
N +IN+IDT
Sbjct: 87 NHLINLIDT 95


>sp|RL14_CALMQ|LARGE ribosomal subunit protein uL14|Caldivirga maquilingensis (strain

Query: 1 INSIINVID 9
+NS++NV D
Sbjct: 24 MNSLVNVAD 32




70|SequenceR|355|346|HATYSINSII

>sp|RPO3_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma volcanium (strain ATCC

Query: 3 TYSINSI 9
TYSIN I
Sbjct: 104 TYSINKI 110




71|SequenceR|360|351|LTRLHHATYS

>sp|Y515_METJA|UNCHARACTERIZED protein MJ0515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RLHHATY 9
RL H+TY
Sbjct: 230 RLRHSTY 236


>sp|Y1194_METTH|PROBABLE deacetylase MTH_1194|Methanothermobacter thermautotrophicus (strain

Query: 5 HHATY 9
HHATY
Sbjct: 117 HHATY 121




72|SequenceR|365|356|NLNSTLTRLH

>sp|FTSZ2_THEKO|CELL division protein FtsZ 2|Thermococcus kodakarensis (strain ATCC

Query: 3 NSTLTRLH 10
N+T+TRL+
Sbjct: 48 NNTITRLY 55


>sp|FTSZ2_PYRAB|CELL division protein FtsZ 2|Pyrococcus abyssi (strain GE5 /

Query: 3 NSTLTRLH 10
N+T+TRL+
Sbjct: 46 NNTITRLY 53


>sp|TRPA_SULTO|TRYPTOPHAN synthase alpha chain|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NLNSTLTRLH 10
NL++ LT LH
Sbjct: 91 NLDNFLTTLH 100


>sp|Y2330_ARCFU|UNCHARACTERIZED protein AF_2330|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NLNSTLTRLH 10
+LN LT LH
Sbjct: 111 SLNEFLTNLH 120


>sp|Y939_SULTO|KELCH domain-containing protein STK_09390|Sulfurisphaera tokodaii (strain

Query: 1 NLNSTLT 7
NLN+TLT
Sbjct: 414 NLNATLT 420




73|SequenceR|370|361|TTRVENLNST

>sp|ASPD_METAC|L-ASPARTATE dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TTRVENLNS 9
+TRVENL S
Sbjct: 234 STRVENLPS 242


>sp|SPH3_HALVD|SMC-LIKE protein Sph3|Haloferax volcanii (strain ATCC 29605

Query: 2 TRVENLNST 10
+R+E+LNST
Sbjct: 275 SRIESLNST 283


>sp|RL4_METTH|LARGE ribosomal subunit protein uL4|Methanothermobacter

Query: 3 RVENLNS 9
RVENLN+
Sbjct: 220 RVENLNA 226


>sp|ASPD_METBU|L-ASPARTATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 1 TTRVENL 7
TTRVEN+
Sbjct: 234 TTRVENV 240


>sp|ASPD_METBF|L-ASPARTATE dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TTRVENLNS 9
+TRVENL S
Sbjct: 234 STRVENLPS 242




74|SequenceR|375|366|LTDTCTTRVE

>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LTDTCTTR 8
LTD C TR
Sbjct: 233 LTDWCITR 240


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LTDTCTTR 8
LTD C TR
Sbjct: 229 LTDWCITR 236


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LTDTCTTR 8
LTD C TR
Sbjct: 233 LTDWCITR 240


>sp|AROE_SACI7|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain

Query: 2 TDTCTTRVE 10
TDT +TR++
Sbjct: 82 TDTYSTRIQ 90


>sp|AROE_SACI6|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.16.4 /

Query: 2 TDTCTTRVE 10
TDT +TR++
Sbjct: 82 TDTYSTRIQ 90


>sp|AROE_SACI4|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.14.25

Query: 2 TDTCTTRVE 10
TDT +TR++
Sbjct: 82 TDTYSTRIQ 90


>sp|AROE_SACI3|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.16.27)

Query: 2 TDTCTTRVE 10
TDT +TR++
Sbjct: 82 TDTYSTRIQ 90


>sp|AROE_SACI2|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain L.S.2.15

Query: 2 TDTCTTRVE 10
TDT +TR++
Sbjct: 82 TDTYSTRIQ 90


>sp|AROE_SACI1|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain

Query: 2 TDTCTTRVE 10
TDT +TR++
Sbjct: 82 TDTYSTRIQ 90


>sp|SYM_METBU|METHIONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LTDTCTTR 8
LTD C TR
Sbjct: 229 LTDWCITR 236




75|SequenceR|380|371|DTHKTLTDTC

>sp|MCRA_METBF|METHYL-COENZYME M reductase subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 1 DTHKTLTDTC 10
+TH L D C
Sbjct: 166 ETHPALVDDC 175


>sp|MCRA_METAC|METHYL-COENZYME M reductase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 1 DTHKTLTDTC 10
+TH L D C
Sbjct: 166 ETHPALVDDC 175


>sp|Y996_METJA|METALLOPROTEASE MJ0996|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DTHKTLTD 8
DT+K +TD
Sbjct: 126 DTYKNMTD 133


>sp|AATB_METAR|A-TYPE ATP synthase subunit B|Methanocella arvoryzae (strain DSM 22066

Query: 1 DTHKTLTDTC 10
+ HK ++D C
Sbjct: 361 EDHKAVSDQC 370


>sp|CDC63_SACS2|ORC1-TYPE DNA replication protein 3|Saccharolobus solfataricus (strain ATCC

Query: 3 HKTLTDTC 10
HK TD C
Sbjct: 313 HKMYTDLC 320


>sp|HEM1_METLZ|GLUTAMYL-TRNA reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DTHKTLTDTC 10
DT+ +TD C
Sbjct: 122 DTNDVITDVC 131


>sp|NADC_METTH|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 1 DTHKTLTDTC 10
DTH+ D C
Sbjct: 146 DTHRFRLDDC 155


>sp|NADC_METJA|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 1 DTHKTLTDTC 10
DTH+ D C
Sbjct: 149 DTHRFRLDDC 158


>sp|HUTI_PICTO|IMIDAZOLONEPROPIONASE torridus (strain ATCC 700027

Query: 3 HKTLTDT 9
HKT+ DT
Sbjct: 94 HKTMNDT 100


>sp|GSA_HALLT|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 HKTLTDTC 10
H+TL D C
Sbjct: 217 HETLRDLC 224




76|SequenceR|385|376|LSTLDDTHKT

>sp|TRPB1_METTH|TRYPTOPHAN synthase beta chain 1|Methanothermobacter thermautotrophicus

Query: 1 LSTLDDTH 8
+S +DDTH
Sbjct: 176 ISNVDDTH 183


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 TLDDTHK 9
TLD THK
Sbjct: 821 TLDATHK 827


>sp|RL15E_HALWD|LARGE ribosomal subunit protein eL15|Haloquadratum walsbyi (strain DSM

Query: 5 DDTHK 9
DDTHK
Sbjct: 153 DDTHK 157




77|SequenceR|390|381|ALTNNLSTLD

***** No hits found ******


78|SequenceR|395|386|DLRINALTNN

>sp|Y2105_SACS2|UNCHARACTERIZED protein SSO2105|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LRINALTNN 10
LR+NAL+N+
Sbjct: 258 LRLNALSNS 266


>sp|SMC_PYRFU|CHROMOSOME partition protein Smc|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RINALTNN 10
+INAL NN
Sbjct: 836 KINALKNN 843




79|SequenceR|400|391|RLSVSDLRIN

***** No hits found ******


80|SequenceR|405|396|LDQQMRLSVS

***** No hits found ******


81|SequenceR|410|401|LRSRMLDQQM

***** No hits found ******


82|SequenceR|415|406|AVETDLRSRM

>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 1 AVETDLRSRM 10
++E DLRSR+
Sbjct: 109 SMEPDLRSRL 118


>sp|METK_METMA|S-ADENOSYLMETHIONINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 TDLRSRM 10
TDL+SRM
Sbjct: 182 TDLKSRM 188


>sp|METK_METAC|S-ADENOSYLMETHIONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 TDLRSRM 10
TDL+SRM
Sbjct: 182 TDLKSRM 188


>sp|METK_METBF|S-ADENOSYLMETHIONINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 TDLRSRM 10
TDL+SRM
Sbjct: 182 TDLKSRM 188


>sp|RL32_HALSA|LARGE ribosomal subunit protein eL32|Halobacterium salinarum (strain

Query: 2 VETDLRSR 9
VET+LR+R
Sbjct: 90 VETELRAR 97




83|SequenceR|420|411|IVSLNAVETD

>sp|GGGPS_METTP|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 NAVETD 10
NAVETD
Sbjct: 17 NAVETD 22




84|SequenceR|425|416|KMEEMIVSLN

>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum labreanum

Query: 2 MEEMIVSLN 10
MEE+I SLN
Sbjct: 332 MEELIASLN 340




85|SequenceR|430|421|KSDVLKMEEM

>sp|Y697_METVS|MEMO1 family protein Mevan_0697|Methanococcus vannielii (strain ATCC

Query: 3 DVLKMEE 9
D+LKMEE
Sbjct: 216 DILKMEE 222


>sp|GSA_METB6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoregula boonei (strain DSM 21154

Query: 1 KSDVLKME 8
KSD++K+E
Sbjct: 128 KSDIIKIE 135


>sp|Y1451_METJA|UNCHARACTERIZED protein MJ1451|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SDVLKMEEM 10
SD++K+EE+
Sbjct: 346 SDLIKLEEL 354


>sp|GSA_METPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 KSDVLKME 8
KSD++K+E
Sbjct: 130 KSDIVKVE 137


>sp|RS13_METS3|SMALL ribosomal subunit protein uS13|Methanobrevibacter smithii (strain

Query: 3 DVLKMEEM 10
DVLK+EE+
Sbjct: 59 DVLKIEEI 66


>sp|NADA_METMA|QUINOLINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KSDVLKMEE 9
+ DVLKM+E
Sbjct: 179 REDVLKMKE 187


>sp|NADA_METBF|QUINOLINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KSDVLKMEE 9
+ DVLKM+E
Sbjct: 179 REDVLKMKE 187


>sp|NADA1_METAC|QUINOLINATE synthase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KSDVLKMEE 9
+ DVLKM+E
Sbjct: 179 REDVLKMKE 187


>sp|SERK_STAMF|ATP-DEPENDENT L-serine kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 KSDVLKMEEM 10
K DVLK EE+
Sbjct: 135 KDDVLKDEEL 144




86|SequenceR|435|426|ILQGHKSDVL

>sp|Y1094_HALWD|PUTATIVE heme-binding protein HQ_1094A|Haloquadratum walsbyi (strain DSM

Query: 4 GHKSDVL 10
GHK+D+L
Sbjct: 65 GHKADIL 71


>sp|DNAG_NATPD|DNA primase DnaG|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LQGHKSDVL 10
L+GH SDV+
Sbjct: 411 LRGHVSDVI 419


>sp|MOBA_METTH|PROBABLE molybdenum cofactor guanylyltransferase|Methanothermobacter

Query: 2 LQGHKSDVL 10
L GH SDVL
Sbjct: 40 LLGHFSDVL 48


>sp|Y3100_HALMA|PUTATIVE heme-binding protein rrnAC3100|Haloarcula marismortui (strain

Query: 2 LQGHKSDVL 10
+ GHK+D++
Sbjct: 65 VMGHKADIM 73


>sp|RL22_THEPD|LARGE ribosomal subunit protein uL22|Thermofilum pendens (strain DSM

Query: 4 GHKSDV 9
GH+SDV
Sbjct: 69 GHRSDV 74


>sp|Y286_KORCO|UPF0282 protein Kcr_0286|Korarchaeum cryptofilum (strain OPF8)

Query: 1 ILQGHKSDVL 10
+ Q HK+D+L
Sbjct: 60 VRQAHKADLL 69




87|SequenceR|440|431|ITFNKILQGH

>sp|MPG1_SULAC|PUTATIVE mannose-1-phosphate guanyltransferase|Sulfolobus acidocaldarius

Query: 1 ITFNKILQGH 10
I FNK+L+ H
Sbjct: 113 IDFNKLLEYH 122


>sp|HEM3_PYRAR|PROBABLE porphobilinogen deaminase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 NKILQG 9
NKILQG
Sbjct: 154 NKILQG 159


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TFNKILQGH 10
+FN+++ GH
Sbjct: 39 SFNELIPGH 47


>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 2 TFNKILQGH 10
+FN+++ GH
Sbjct: 39 SFNELIPGH 47


>sp|COPP_THEAC|BIFUNCTIONAL phosphopantetheine adenylyltransferase/NTP

Query: 2 TFNKILQGH 10
TF+K+ +GH
Sbjct: 8 TFSKLHKGH 16


>sp|COPP_THEVO|BIFUNCTIONAL phosphopantetheine adenylyltransferase/NTP

Query: 2 TFNKILQGH 10
TF+K+ +GH
Sbjct: 8 TFSKLHKGH 16


>sp|RSMA_METTH|PROBABLE ribosomal RNA small subunit|Methanothermobacter thermautotrophicus

Query: 1 ITFNKILQG 9
++FN++L+G
Sbjct: 233 LSFNEVLRG 241


>sp|ADEC_META3|ADENINE deaminase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 FNKILQGH 10
+NK++ GH
Sbjct: 205 YNKLIDGH 212


>sp|ADEC_METJA|ADENINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FNKILQGH 10
+NK++ GH
Sbjct: 183 YNKLIDGH 190




88|SequenceR|445|436|PPGQLITFNK

>sp|TRPB_PYRIL|TRYPTOPHAN synthase beta chain|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PPGQLITFN 9
PPG ++ FN
Sbjct: 385 PPGSVVVFN 393


>sp|VHUB_METVO|POLYFERREDOXIN protein VhuB|Methanococcus voltae

Query: 2 PGQLITFNK 10
PG +IT+N+
Sbjct: 210 PGDMITYNR 218


>sp|NUCS_PYRAB|ENDONUCLEASE NucS|Pyrococcus abyssi (strain GE5 /

Query: 1 PPGQLITFNK 10
PPG +TF +
Sbjct: 77 PPGSKVTFKE 86


>sp|IMDH_HALSA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PGQLITFN 9
PG++IT N
Sbjct: 381 PGRVITMN 388


>sp|Y085_METJA|UNCHARACTERIZED lipoprotein MJ0085|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GQLITFN 9
GQL TFN
Sbjct: 158 GQLATFN 164




89|SequenceR|450|441|PGRPGPPGQL

>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PGRPGPP 7
PGRP PP
Sbjct: 510 PGRPSPP 516


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PGRPGPP 7
PGRP PP
Sbjct: 510 PGRPSPP 516


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PGRPGPP 7
PGRP PP
Sbjct: 510 PGRPSPP 516


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PGRPGPP 7
PGRP PP
Sbjct: 510 PGRPSPP 516


>sp|Y520_METJA|PUTATIVE NADH-ubiquinone oxidoreductase MJ0520|Methanocaldococcus

Query: 2 GRPGPP 7
GRPGPP
Sbjct: 38 GRPGPP 43


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PGRPGPP 7
PGRP PP
Sbjct: 514 PGRPSPP 520


>sp|RL1_PICTO|LARGE ribosomal subunit protein uL1|Picrophilus torridus (strain ATCC

Query: 3 RPGPPGQ 9
RP PPGQ
Sbjct: 126 RPVPPGQ 132


>sp|DGGGP_METHJ|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PGRPGPPGQL 10
P RP P GQ+
Sbjct: 68 PDRPIPSGQI 77


>sp|AATB_NITMS|A-TYPE ATP synthase subunit B|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PGRPGPPGQL 10
PGR G PG L
Sbjct: 272 PGRKGYPGYL 281


>sp|Y1659_ARCFU|UNCHARACTERIZED protein AF_1659|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGRPGPPGQL 10
PG PG G+L
Sbjct: 61 PGEPGEDGKL 70


>sp|AATB_CENSY|A-TYPE ATP synthase subunit B|Cenarchaeum symbiosum (strain A)

Query: 1 PGRPGPPGQL 10
PGR G PG L
Sbjct: 272 PGRKGYPGYL 281


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 1 PGRPGPP 7
P RP PP
Sbjct: 505 PTRPSPP 511


>sp|CBID_PYRAE|COBALT-PRECORRIN-5B C(1)-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PGRPGPPGQ 9
PG P PPG+
Sbjct: 103 PGLPVPPGE 111


>sp|DGGGP_METJA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PGRPGPPGQL 10
P RP P G++
Sbjct: 75 PSRPLPSGKI 84


>sp|DGGGP_METBU|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PGRPGPPGQL 10
P RP P G++
Sbjct: 76 PSRPIPSGKI 85


>sp|DGGGP_METST|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PGRPGPPGQL 10
P RP P G++
Sbjct: 65 PNRPIPSGKI 74


>sp|Y1209_PYRHO|UNCHARACTERIZED protein PH1209|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PGRPGPPGQL 10
PG PG G+L
Sbjct: 18 PGSPGYKGEL 27


>sp|Y781_METJA|UNCHARACTERIZED protein MJ0781|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGRPGPP 7
P RPG P
Sbjct: 354 PARPGMP 360


>sp|DGGGP_SULTO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PGRPGPPGQL 10
P RP P G++
Sbjct: 70 PNRPLPSGRI 79


>sp|AATB_PICTO|A-TYPE ATP synthase subunit B|Picrophilus torridus (strain ATCC 700027

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 269 PGRRGYPGYM 278


>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 792 PGRRGYPGYM 801


>sp|PYRG_NATPD|CTP synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PGRPGPP 7
PGR PP
Sbjct: 521 PGRASPP 527


>sp|AATB_AERPE|A-TYPE ATP synthase subunit B|Aeropyrum pernix (strain ATCC 700893

Query: 1 PGRPGPPGQL 10
PGR G PG L
Sbjct: 271 PGRQGYPGYL 280


>sp|GATD_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Aeropyrum pernix (strain ATCC 700893

Query: 3 RPGPPGQL 10
RPG PG L
Sbjct: 54 RPGTPGAL 61


>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 275 PGRRGYPGYM 284


>sp|PAND_PYRIL|ASPARTATE 1-decarboxylase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PGRPG 5
PGRPG
Sbjct: 60 PGRPG 64


>sp|AATB_META3|A-TYPE ATP synthase subunit B|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 273 PGRRGYPGYM 282


>sp|AATB_HALMA|A-TYPE ATP synthase subunit B|Haloarcula marismortui (strain ATCC 43049

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 273 PGRRGYPGYM 282


>sp|AATB_THEVO|A-TYPE ATP synthase subunit B|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 269 PGRRGYPGYM 278


>sp|AATB_HALLT|A-TYPE ATP synthase subunit B|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 274 PGRRGYPGYM 283


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGRPGPP 7
P RP PP
Sbjct: 509 PYRPSPP 515


>sp|AATB_THEAC|A-TYPE ATP synthase subunit B|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 269 PGRRGYPGYM 278


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 PGRPGPP 7
PG P PP
Sbjct: 515 PGDPSPP 521


>sp|TRMY_THEKO|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus

Query: 2 GRPGPP 7
GRP PP
Sbjct: 58 GRPNPP 63


>sp|AATB_METST|A-TYPE ATP synthase subunit B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 274 PGRRGYPGYM 283


>sp|DCDA_THEAC|DIAMINOPIMELATE decarboxylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GRPGPP 7
GRP PP
Sbjct: 370 GRPRPP 375


>sp|AATB_HYPBU|A-TYPE ATP synthase subunit B|Hyperthermus butylicus (strain DSM 5456

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 276 PGRQGYPGYM 285


>sp|AATB_PYRHO|A-TYPE ATP synthase subunit B|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 271 PGRRGYPGYM 280


>sp|AATB_SULAC|A-TYPE ATP synthase subunit B|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 273 PGRGGYPGYM 282


>sp|AATB_PYRAB|A-TYPE ATP synthase subunit B|Pyrococcus abyssi (strain GE5 /

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 268 PGRRGYPGYM 277


>sp|AATB_METTH|A-TYPE ATP synthase subunit B|Methanothermobacter thermautotrophicus

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 273 PGRRGYPGYM 282


>sp|AATB_METS3|A-TYPE ATP synthase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 273 PGRRGYPGYM 282


>sp|AATB2_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 274 PGRRGYPGYM 283


>sp|AATB_METMP|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain DSM 14266

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 273 PGRRGYPGYM 282


>sp|AATB_PYRFU|A-TYPE ATP synthase subunit B|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 268 PGRRGYPGYM 277


>sp|AATB_METM7|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C7 /

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 273 PGRRGYPGYM 282


>sp|AATB_METM6|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C6 /

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 273 PGRRGYPGYM 282


>sp|AATB_METAR|A-TYPE ATP synthase subunit B|Methanocella arvoryzae (strain DSM 22066

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 266 PGRRGYPGYM 275


>sp|AATB_METPE|A-TYPE ATP synthase subunit B|Methanosphaerula palustris (strain ATCC

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 266 PGRRGYPGYM 275


>sp|AATB_SACI7|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 270 PGRGGYPGYM 279


>sp|AATB_SACI6|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 270 PGRGGYPGYM 279


>sp|AATB_SACI4|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 270 PGRGGYPGYM 279


>sp|AATB_SACI3|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.27)

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 270 PGRGGYPGYM 279


>sp|AATB_SACI2|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 270 PGRGGYPGYM 279


>sp|AATB_SACI1|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 270 PGRGGYPGYM 279


>sp|RPO2N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanocaldococcus jannaschii (strain

Query: 4 PGPPGQL 10
PG PGQ+
Sbjct: 214 PGMPGQI 220


>sp|AATB_METM5|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C5 /

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 273 PGRRGYPGYM 282


>sp|AATB_SACS2|A-TYPE ATP synthase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 270 PGRGGYPGYM 279


>sp|AATB_METS5|A-TYPE ATP synthase subunit B|Metallosphaera sedula (strain ATCC 51363

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 273 PGRGGYPGYM 282


>sp|AATB_HALSA|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 700922

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 274 PGRRGYPGYM 283


>sp|AATB_HALS3|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 29341

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 274 PGRRGYPGYM 283


>sp|AROA_METKA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 GRPGPPGQL 10
GRP PG+L
Sbjct: 227 GRPRSPGKL 235


>sp|AATB_HALVD|A-TYPE ATP synthase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 271 PGRRGYPGYM 280


>sp|AATB_NATPD|A-TYPE ATP synthase subunit B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 274 PGRRGYPGYM 283


>sp|AATB_THEKO|A-TYPE ATP synthase subunit B|Thermococcus kodakarensis (strain ATCC

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 271 PGRRGYPGYM 280


>sp|AATB_SULTO|A-TYPE ATP synthase subunit B|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 272 PGRGGYPGYM 281


>sp|AATB_METJA|A-TYPE ATP synthase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 273 PGRRGYPGYM 282


>sp|AATB_METVS|A-TYPE ATP synthase subunit B|Methanococcus vannielii (strain ATCC 35089

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 273 PGRRGYPGYM 282


>sp|AATB_DESSY|A-TYPE ATP synthase subunit B|Desulfurococcus sp. (strain SY)

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 269 PGRRGYPGYM 278


>sp|AATB_THESI|A-TYPE ATP synthase subunit B|Thermococcus sp. (strain KI)

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 269 PGRRGYPGYM 278


>sp|AATB_THEON|A-TYPE ATP synthase subunit B|Thermococcus onnurineus (strain NA1)

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 271 PGRRGYPGYM 280


>sp|AATB_THEGJ|A-TYPE ATP synthase subunit B|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 269 PGRRGYPGYM 278


>sp|AATB_METMJ|A-TYPE ATP synthase subunit B|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 266 PGRRGYPGYM 275


>sp|AATB_ARCFU|A-TYPE ATP synthase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 266 PGRRGYPGYM 275


>sp|AATB_METBU|A-TYPE ATP synthase subunit B|Methanococcoides burtonii (strain DSM 6242

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 267 PGRRGYPGYM 276


>sp|AATB_METLZ|A-TYPE ATP synthase subunit B|Methanocorpusculum labreanum (strain ATCC

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 266 PGRRGYPGYM 275


>sp|AATB_METTP|A-TYPE ATP synthase subunit B|Methanothrix thermoacetophila (strain DSM

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 267 PGRRGYPGYM 276


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 2 GRPGP 6
GRPGP
Sbjct: 148 GRPGP 152


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GRPGPPG 8
G P PPG
Sbjct: 470 GNPAPPG 476


>sp|AATB_THEPD|A-TYPE ATP synthase subunit B|Thermofilum pendens (strain DSM 2475

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 269 PGRLGYPGYM 278


>sp|AATB1_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 266 PGRRGYPGYM 275


>sp|AATB_METMA|A-TYPE ATP synthase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 267 PGRRGYPGYM 276


>sp|AATB_METBF|A-TYPE ATP synthase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 267 PGRRGYPGYM 276


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 271 PGRRGYPGYM 280


>sp|AATB_METB6|A-TYPE ATP synthase subunit B|Methanoregula boonei (strain DSM 21154

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 266 PGRRGYPGYM 275


>sp|AATB_METAC|A-TYPE ATP synthase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 267 PGRRGYPGYM 276


>sp|AATB_PYRAE|A-TYPE ATP synthase subunit B|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PGRPGPPGQL 10
PGR G PG +
Sbjct: 271 PGRRGYPGYM 280




90|SequenceR|455|446|GRDGRPGRPG

>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 4 GRPGRPG 10
GR GRPG
Sbjct: 388 GRAGRPG 394


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GRPGRPG 10
GR GRPG
Sbjct: 383 GRAGRPG 389


>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 GRPGRPG 10
GR GRPG
Sbjct: 384 GRAGRPG 390


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 4 GRPGRPG 10
GR GRPG
Sbjct: 388 GRAGRPG 394


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GRPGRPG 10
GR GRPG
Sbjct: 381 GRAGRPG 387


>sp|Y781_METJA|UNCHARACTERIZED protein MJ0781|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 RPGRPG 10
RP RPG
Sbjct: 353 RPARPG 358


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 6 PGRPG 10
PGRPG
Sbjct: 198 PGRPG 202


>sp|NADC_ARCFU|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 2 RDGRPGRPG 10
+DG P +PG
Sbjct: 48 KDGEPIKPG 56


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 6 PGRPG 10
PGRPG
Sbjct: 197 PGRPG 201


>sp|Y866_ARCFU|UNCHARACTERIZED sugar kinase AF_0866|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DGRPGRP 9
DG+ GRP
Sbjct: 80 DGKTGRP 86


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 5 RPGRP 9
RPGRP
Sbjct: 509 RPGRP 513


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 RPGRP 9
RPGRP
Sbjct: 509 RPGRP 513


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 RPGRP 9
RPGRP
Sbjct: 509 RPGRP 513


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 5 RPGRP 9
RPGRP
Sbjct: 509 RPGRP 513


>sp|Y1659_ARCFU|UNCHARACTERIZED protein AF_1659|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DGRPGRPG 10
D +PG PG
Sbjct: 58 DWKPGEPG 65


>sp|DNLI_PYRAB|DNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 GRDGRP 6
G DGRP
Sbjct: 304 GEDGRP 309


>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 GRDGRPGRP 9
G +GR GRP
Sbjct: 86 GSEGRGGRP 94


>sp|FEN_IGNH4|FLAP endonuclease 1|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GRDGRP 6
G DGRP
Sbjct: 45 GEDGRP 50


>sp|DNLI_PYRAY|DNA ligase|Pyrococcus abyssi

Query: 1 GRDGRP 6
G DGRP
Sbjct: 304 GEDGRP 309


>sp|PUR5_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 RDGRPGRPG 10
R G+PG P
Sbjct: 32 RRGKPGEPA 40


>sp|FTR_METMA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DGRPG 7
DGRPG
Sbjct: 67 DGRPG 71


>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC

Query: 3 DGRPGRP 9
D RPGRP
Sbjct: 59 DDRPGRP 65


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 GRDGRP 6
G DGRP
Sbjct: 460 GEDGRP 465


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 1 GRDGRP 6
G DGRP
Sbjct: 460 GEDGRP 465


>sp|AROA_NATPD|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Natronomonas pharaonis (strain ATCC

Query: 1 GRDGRPGRP 9
G DG PG P
Sbjct: 72 GFDGTPGTP 80


>sp|TDXH2_THEAC|PEROXIREDOXIN 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RDGRPG 7
RDG PG
Sbjct: 184 RDGEPG 189


>sp|RS3A_PICTO|SMALL ribosomal subunit protein eS1|Picrophilus torridus (strain ATCC

Query: 1 GRDGRPGRPG 10
GRDG PG
Sbjct: 192 GRDGYVEEPG 201


>sp|FTR_ARCFU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DGRPG 7
DGRPG
Sbjct: 67 DGRPG 71




91|SequenceR|460|451|PPGQSGRDGR

>sp|GCSPA_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 PPGQSGRD 8
PPG+ G D
Sbjct: 239 PPGEYGSD 246


>sp|Y1659_ARCFU|UNCHARACTERIZED protein AF_1659|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PGQSGRDGR 10
PG+ G DG+
Sbjct: 61 PGEPGEDGK 69


>sp|RNP4_AERPE|RIBONUCLEASE P protein component 4|Aeropyrum pernix (strain ATCC 700893

Query: 1 PPGQSGRDGR 10
PP Q GRD R
Sbjct: 142 PPRQGGRDNR 151


>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GQSGRDG 9
GQ GRDG
Sbjct: 329 GQKGRDG 335


>sp|GCSPA_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 1 PPGQSGRD 8
PPG+ G D
Sbjct: 262 PPGELGAD 269


>sp|GCSPA_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 PPGQSGRD 8
PPG+ G D
Sbjct: 239 PPGEYGSD 246


>sp|RADA_NANEQ|DNA repair and recombination protein|Nanoarchaeum equitans (strain

Query: 1 PPGQSGRDGR 10
PP Q G +G+
Sbjct: 134 PPEQGGLEGK 143


>sp|LEUC_PYRIL|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PPGQSGRD 8
PPG G+D
Sbjct: 166 PPGVMGKD 173


>sp|G3P_NATPD|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PGQSGR 7
PGQ+GR
Sbjct: 173 PGQTGR 178




92|SequenceR|465|456|NGTPGPPGQS

>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 NGTPGPPG 8
NG P PPG
Sbjct: 469 NGNPAPPG 476


>sp|Y520_METJA|PUTATIVE NADH-ubiquinone oxidoreductase MJ0520|Methanocaldococcus

Query: 2 GTPGPP 7
G PGPP
Sbjct: 38 GRPGPP 43


>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 3 TPGPPGQS 10
TP PPG S
Sbjct: 442 TPAPPGNS 449


>sp|Y1232_METJA|UNCHARACTERIZED protein MJ1232|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NGTPGPPG 8
+G PGP G
Sbjct: 55 DGVPGPKG 62


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 NGTPGPPG 8
NG P PPG
Sbjct: 469 NGNPVPPG 476


>sp|PRIS_SACS2|DNA primase small subunit PriS|Saccharolobus solfataricus (strain ATCC

Query: 2 GTPGPPGQS 10
G PG PG S
Sbjct: 207 GVPGYPGGS 215


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 1 NGTPGPPGQS 10
NG PGP QS
Sbjct: 530 NGIPGPLEQS 539


>sp|SDO1_METTH|RIBOSOME maturation protein SDO1 homolog|Methanothermobacter

Query: 1 NGTPGPP 7
NG P PP
Sbjct: 117 NGLPHPP 123


>sp|G3P_METHJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 NGTPGPPGQS 10
+GTPG G+S
Sbjct: 84 DGTPGGVGES 93


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 1 NGTPGPPGQS 10
NG PGP QS
Sbjct: 530 NGIPGPLEQS 539


>sp|Y274_PYRHO|PUTATIVE GTPase PH0274|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GTPGPPG 8
G GPPG
Sbjct: 51 GITGPPG 57


>sp|Y249_PYRAB|PUTATIVE GTPase PYRAB02490|Pyrococcus abyssi (strain GE5 /

Query: 2 GTPGPPG 8
G GPPG
Sbjct: 49 GITGPPG 55


>sp|MDH_HALSA|MALATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GTPGPPGQS 10
G P PGQS
Sbjct: 80 GIPRQPGQS 88


>sp|MDH_HALS3|MALATE dehydrogenase|Halobacterium salinarum (strain ATCC 29341

Query: 2 GTPGPPGQS 10
G P PGQS
Sbjct: 80 GIPRQPGQS 88


>sp|HMDX_METJA|H(2)-FORMING methylenetetrahydromethanopterin dehydrogenase-related protein

Query: 2 GTPGPPGQ 9
G PG P Q
Sbjct: 147 GVPGTPSQ 154


>sp|DCDA_THEAC|DIAMINOPIMELATE decarboxylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NGTPGPP 7
NG P PP
Sbjct: 369 NGRPRPP 375


>sp|RL11_METTH|LARGE ribosomal subunit protein uL11|Methanothermobacter

Query: 2 GTPGPP 7
TPGPP
Sbjct: 15 ATPGPP 20


>sp|HEM3_PYRAR|PROBABLE porphobilinogen deaminase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 PGPPGQ 9
P PPGQ
Sbjct: 192 PPPPGQ 197


>sp|CBID_PYRAE|COBALT-PRECORRIN-5B C(1)-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GTPGPPGQ 9
G P PPG+
Sbjct: 104 GLPVPPGE 111




93|SequenceR|470|461|GKQGKNGTPG

>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 1 GKQGKNG 7
GK GKNG
Sbjct: 138 GKSGKNG 144


>sp|AROA_METMA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosarcina mazei (strain ATCC

Query: 3 QGKNGTPG 10
QG NG PG
Sbjct: 71 QGSNGKPG 78


>sp|RNP1_THEON|RIBONUCLEASE P protein component 1|Thermococcus onnurineus (strain NA1)

Query: 1 GKQGKNGTPG 10
GK+GK+ PG
Sbjct: 5 GKEGKDRAPG 14


>sp|COFH1_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina mazei (strain ATCC

Query: 2 KQGKNGTPG 10
K+G+ TPG
Sbjct: 259 KEGRYATPG 267


>sp|RAD50_THEAC|DNA double-strand break repair Rad50|Thermoplasma acidophilum (strain

Query: 4 GKNGTPG 10
GKNG P
Sbjct: 747 GKNGVPA 753


>sp|Y1007_METMA|UPF0215 protein MM_1007|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GKNGTP 9
G+NGTP
Sbjct: 142 GRNGTP 147


>sp|BSUHB_ARCFU|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE fulgidus (strain ATCC 49558

Query: 4 GKNGTP 9
GK+GTP
Sbjct: 36 GKDGTP 41


>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKQGKNGTP 9
GK+G+ G P
Sbjct: 375 GKRGETGLP 383


>sp|MCRB_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 4 GKNGTPG 10
GKNGT G
Sbjct: 263 GKNGTVG 269


>sp|NUSA_THEAC|PROBABLE transcription termination protein NusA|Thermoplasma acidophilum

Query: 1 GKQGKN 6
GK+GKN
Sbjct: 118 GKEGKN 123


>sp|AMTAB_ARCFU|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Archaeoglobus

Query: 2 KQGKNG 7
K+GKNG
Sbjct: 375 KEGKNG 380


>sp|KUP_METBF|PROBABLE potassium transport system protein|Methanosarcina barkeri (strain

Query: 1 GKQGKNGT 8
GK+G+ GT
Sbjct: 70 GKKGEGGT 77


>sp|KUP_METAC|PROBABLE potassium transport system protein|Methanosarcina acetivorans

Query: 1 GKQGKNGT 8
GK+G+ GT
Sbjct: 70 GKKGEGGT 77


>sp|DACZ_HALVD|DIADENYLATE cyclase|Haloferax volcanii (strain ATCC 29605

Query: 1 GKQGKNGTP 9
GK+G+ G P
Sbjct: 137 GKKGQKGEP 145




94|SequenceR|475|466|PEGKEGKQGK

>sp|SYS2_METVS|TYPE-2 serine--tRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PEGKEGKQGK 10
PEGKEG K
Sbjct: 38 PEGKEGDASK 47


>sp|MTD_METTM|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanothermobacter

Query: 1 PEGKEGK 7
P GKEGK
Sbjct: 258 PHGKEGK 264


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 2 EGKEGKQGK 10
EGK G++GK
Sbjct: 491 EGKFGRRGK 499


>sp|PCNA1_SULAC|DNA polymerase sliding clamp 1|Sulfolobus acidocaldarius (strain ATCC

Query: 2 EGKEGKQ 8
EGKEG Q
Sbjct: 167 EGKEGSQ 173




95|SequenceR|480|471|PGPPGPEGKE

>sp|RS3A_AERPE|SMALL ribosomal subunit protein eS1|Aeropyrum pernix (strain ATCC 700893

Query: 1 PGPPGPE 7
PGP GPE
Sbjct: 195 PGPNGPE 201


Query: 4 PGPEGKE 10
PGP G E
Sbjct: 195 PGPNGPE 201


>sp|ARLY_METTP|ARGININOSUCCINATE lyase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PGPPGPE 7
PG P PE
Sbjct: 436 PGGPAPE 442


>sp|ARLY_METTH|ARGININOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PGPPGPE 7
PG P PE
Sbjct: 444 PGGPAPE 450


>sp|ARLY_METMA|ARGININOSUCCINATE lyase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PGPPGPE 7
PG P PE
Sbjct: 441 PGGPAPE 447


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PGPPGPEGKE 10
PG P PE +E
Sbjct: 411 PGKPSPEDEE 420


>sp|Y1659_ARCFU|UNCHARACTERIZED protein AF_1659|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGPPGPEGK 9
PG PG +GK
Sbjct: 61 PGEPGEDGK 69


>sp|QUEC_AERPE|7-CYANO-7-DEAZAGUANINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PPGPEGK 9
PPGPE +
Sbjct: 247 PPGPEAE 253


>sp|SYW_SULAC|TRYPTOPHAN--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PP--GPEGK 9
PP GPEGK
Sbjct: 246 PPLTGPEGK 254


>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 3 PPGPEGKE 10
PPGP E
Sbjct: 55 PPGPTSHE 62


>sp|Y1232_METJA|UNCHARACTERIZED protein MJ1232|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GPPGPEG 8
G PGP+G
Sbjct: 56 GVPGPKG 62


>sp|SYW_SULTO|TRYPTOPHAN--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PP--GPEGK 9
PP GPEGK
Sbjct: 246 PPLTGPEGK 254


>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PGPPGPEGKE 10
PG P PE ++
Sbjct: 126 PGTPKPEAEK 135


>sp|ASRAC_PYRHO|ALANINE/SERINE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PPGPEGKE 10
PPGP KE
Sbjct: 27 PPGPRAKE 34


>sp|DTDA_METKA|D-AMINOACYL-TRNA deacylase|Methanopyrus kandleri (strain AV19 /

Query: 1 PGPPGPEGK 9
PG P PE K
Sbjct: 94 PGNPTPEAK 102


>sp|RFCL_METAC|REPLICATION factor C large subunit|Methanosarcina acetivorans (strain ATCC

Query: 3 PPGPEGKE 10
PPGP E
Sbjct: 483 PPGPHSSE 490


>sp|SYW_SACS2|TRYPTOPHAN--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PP--GPEGK 9
PP GPEGK
Sbjct: 245 PPLTGPEGK 253


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 2 GPPGPEGKE 10
G PG EG+E
Sbjct: 629 GQPGIEGRE 637


>sp|HEM1_NATPD|GLUTAMYL-TRNA reductase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PPGPEG 8
P GPEG
Sbjct: 426 PDGPEG 431


>sp|RFCL_METMA|REPLICATION factor C large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PGPPGPEGKE 10
PGP PE K+
Sbjct: 480 PGPQSPERKQ 489


>sp|Y213_METKA|UPF0282 protein MK0213|Methanopyrus kandleri (strain AV19 /

Query: 1 PGPPGPEG 8
P P GPEG
Sbjct: 155 PLPHGPEG 162




96|SequenceR|485|476|GREGAPGPPG

>sp|FAU1_IGNH4|PROBABLE ribonuclease FAU-1|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GREGAPGPP 9
G EG+P PP
Sbjct: 39 GHEGSPEPP 47


>sp|Y520_METJA|PUTATIVE NADH-ubiquinone oxidoreductase MJ0520|Methanocaldococcus

Query: 3 EGAPGPP 9
+G PGPP
Sbjct: 37 QGRPGPP 43


>sp|SYS_PYRCJ|SERINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 REGAPGPP 9
REGA PP
Sbjct: 59 REGAKAPP 66


>sp|Y1232_METJA|UNCHARACTERIZED protein MJ1232|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EGAPGPPG 10
+G PGP G
Sbjct: 55 DGVPGPKG 62


>sp|THSA_THEK8|CHAPERONIN subunit alpha|Thermococcus sp. (strain KS-8)

Query: 1 GREGAPGPP 9
GR+GA PP
Sbjct: 530 GRQGAECPP 538


>sp|TRMY_META3|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus aeolicus

Query: 4 GAPGPP 9
GAP PP
Sbjct: 58 GAPNPP 63


>sp|DNAJ_HALSA|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 700922

Query: 3 EGAPGPPG 10
EGAPG PG
Sbjct: 256 EGAPGEPG 263


>sp|DNAJ_HALS3|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 29341

Query: 3 EGAPGPPG 10
EGAPG PG
Sbjct: 256 EGAPGEPG 263


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 2 REGAPGPPG 10
R G P PPG
Sbjct: 37 RAGIPVPPG 45


>sp|SYS_PYRIL|SERINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 REGAPGPP 9
+EGA PP
Sbjct: 59 KEGAKAPP 66


>sp|SYS_PYRAE|SERINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 REGAPGPP 9
+EGA PP
Sbjct: 59 KEGAKAPP 66


>sp|DNAJ_HALLT|CHAPERONE protein DnaJ|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 REGAPGPPG 10
REGAPG G
Sbjct: 250 REGAPGENG 258


>sp|DNAJ_HALMA|CHAPERONE protein DnaJ|Haloarcula marismortui (strain ATCC 43049

Query: 2 REGAPGPPG 10
REGAPG G
Sbjct: 248 REGAPGENG 256


>sp|DNAJ_HALWD|CHAPERONE protein DnaJ|Haloquadratum walsbyi (strain DSM 16790

Query: 2 REGAPGPPG 10
REGAPG G
Sbjct: 251 REGAPGDNG 259


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 REGAPGPP 9
R G P PP
Sbjct: 509 RPGRPSPP 516


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 REGAPGPP 9
R G P PP
Sbjct: 509 RPGRPSPP 516


>sp|SYS_PYRNV|SERINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GREGAPGPP 9
REGA PP
Sbjct: 58 SREGARAPP 66


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 REGAPGPP 9
R G P PP
Sbjct: 509 RPGRPSPP 516


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 REGAPGPP 9
R G P PP
Sbjct: 509 RPGRPSPP 516


>sp|HUTI_HALMA|IMIDAZOLONEPROPIONASE marismortui (strain ATCC 43049

Query: 2 REGAPG 7
REGAPG
Sbjct: 369 REGAPG 374


>sp|GVPD1_HALSA|PROTEIN GvpD1|Halobacterium salinarum (strain ATCC 700922

Query: 2 REGAPG 7
REG+PG
Sbjct: 320 REGSPG 325


>sp|TKSU_THEKO|TK-SUBTILISIN kodakarensis (strain ATCC BAA-918

Query: 1 GREGAPGP 8
G EGAP P
Sbjct: 287 GNEGAPSP 294


>sp|NTPTH_METKA|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Methanopyrus kandleri (strain AV19 /

Query: 1 GREGAPGP 8
REGA GP
Sbjct: 64 AREGASGP 71


>sp|RL10E_THEGJ|LARGE ribosomal subunit protein uL16|Thermococcus gammatolerans (strain

Query: 4 GAPGP 8
GAPGP
Sbjct: 25 GAPGP 29


>sp|RL10E_THEON|LARGE ribosomal subunit protein uL16|Thermococcus onnurineus (strain

Query: 4 GAPGP 8
GAPGP
Sbjct: 25 GAPGP 29


>sp|RL10E_THEKO|LARGE ribosomal subunit protein uL16|Thermococcus kodakarensis (strain

Query: 4 GAPGP 8
GAPGP
Sbjct: 25 GAPGP 29




97|SequenceR|490|481|APGIPGREGA

>sp|Y1487_ARCFU|UNCHARACTERIZED protein AF_1487|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PGIPGREGA 10
PGIPG E A
Sbjct: 193 PGIPGFEAA 201


>sp|RS4_ARCFU|SMALL ribosomal subunit protein uS4|Archaeoglobus fulgidus (strain ATCC

Query: 3 GIPGREG 9
G+PG+EG
Sbjct: 63 GLPGKEG 69


>sp|MTRB_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanopyrus kandleri (strain AV19

Query: 4 IPGREG 9
+PGREG
Sbjct: 64 LPGREG 69


>sp|PYCA_METJA|PYRUVATE carboxylase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 1 APGIPGREGA 10
P IPG EGA
Sbjct: 128 VPLIPGSEGA 137


>sp|Y1659_ARCFU|UNCHARACTERIZED protein AF_1659|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PGIPGREG 9
PG PG +G
Sbjct: 61 PGEPGEDG 68


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 2 PGIPGRE 8
PGI GRE
Sbjct: 631 PGIEGRE 637


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 3 GIPGREG 9
G+P REG
Sbjct: 345 GVPDREG 351


>sp|COFH2_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina mazei (strain ATCC

Query: 3 GIPGREG 9
G PG+EG
Sbjct: 364 GFPGQEG 370


>sp|FTHS_HALMA|FORMATE--TETRAHYDROFOLATE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 PGIPGREGA 10
PG+P R A
Sbjct: 530 PGLPARPAA 538




98|SequenceR|495|486|EGPPGAPGIP

>sp|ILVD_SACI6|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EGPPGAPGIP 10
EGP GAPG+P
Sbjct: 437 EGPKGAPGMP 446


>sp|ILVD_SACI4|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 EGPPGAPGIP 10
EGP GAPG+P
Sbjct: 437 EGPKGAPGMP 446


>sp|ILVD_SACI3|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 EGPPGAPGIP 10
EGP GAPG+P
Sbjct: 437 EGPKGAPGMP 446


>sp|ILVD_SACS2|DIHYDROXY-ACID dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EGPPGAPGIP 10
EGP GAPG+P
Sbjct: 437 EGPKGAPGMP 446


>sp|ILVD_SACI7|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 EGPPGAPGIP 10
EGP GAPG+P
Sbjct: 437 EGPKGAPGMP 446


>sp|ILVD_SACI2|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 EGPPGAPGIP 10
EGP GAPG+P
Sbjct: 437 EGPKGAPGMP 446


>sp|ILVD_SACI1|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 EGPPGAPGIP 10
EGP GAPG+P
Sbjct: 437 EGPKGAPGMP 446


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 EGPPGAPGIP 10
EGP GAPG+P
Sbjct: 438 EGPKGAPGMP 447


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 EGPPGAPGIP 10
EGP GAPG+P
Sbjct: 438 EGPKGAPGMP 447


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 EGPPGAPGIP 10
EGP GAPG+P
Sbjct: 438 EGPKGAPGMP 447


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EGPPGAPGIP 10
EGP GAPG+P
Sbjct: 438 EGPKGAPGMP 447


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EGPPGAPGIP 10
EGP GAPG+P
Sbjct: 438 EGPKGAPGMP 447


>sp|GSA_METM5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C5 /

Query: 2 GPPGAPGIP 10
G P +PGIP
Sbjct: 164 GAPNSPGIP 172


>sp|GSA_METM6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C6 /

Query: 2 GPPGAPGIP 10
G P +PGIP
Sbjct: 164 GAPNSPGIP 172


>sp|GSA_METM7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C7 /

Query: 2 GPPGAPGIP 10
G P +PGIP
Sbjct: 164 GAPNSPGIP 172


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EGPPGAPGIP 10
EGPP G+P
Sbjct: 47 EGPPTTNGMP 56


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GPPGAPGIP 10
G P +PGIP
Sbjct: 167 GAPNSPGIP 175


>sp|DNAJ_HALSA|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 700922

Query: 1 EGPPGAPGIP 10
EG PG PG P
Sbjct: 256 EGAPGEPGAP 265


>sp|DNAJ_HALS3|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 29341

Query: 1 EGPPGAPGIP 10
EG PG PG P
Sbjct: 256 EGAPGEPGAP 265


>sp|GSA_METMP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GPPGAPGIP 10
G P +PGIP
Sbjct: 164 GAPNSPGIP 172


>sp|GSA_METVS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GPPGAPGIP 10
G P +PGIP
Sbjct: 164 GAPNSPGIP 172


>sp|GSA_THEVO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GPPGAPGIP 10
G P +PGIP
Sbjct: 157 GSPSSPGIP 165


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GPPGAPGIP 10
GP GAPG+P
Sbjct: 430 GPKGAPGMP 438


>sp|ILVD_SULAC|DIHYDROXY-ACID dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EGPPGAPGIP 10
EGP G PG+P
Sbjct: 438 EGPKGGPGMP 447


>sp|ILVD_METHJ|DIHYDROXY-ACID dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EGPPGAPGIP 10
EGP G PG+P
Sbjct: 429 EGPKGGPGMP 438


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GPPGAPGIP 10
GP GAPG+P
Sbjct: 435 GPKGAPGMP 443


>sp|ILVD_METB6|DIHYDROXY-ACID dehydratase|Methanoregula boonei (strain DSM 21154

Query: 1 EGPPGAPGIP 10
EGP G PG+P
Sbjct: 432 EGPRGGPGMP 441


>sp|GSA_THEAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GPPGAPGIP 10
G P +PG+P
Sbjct: 157 GSPSSPGVP 165


>sp|ILVD_METMJ|DIHYDROXY-ACID dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EGPPGAPGIP 10
EGP G PG+P
Sbjct: 429 EGPRGGPGMP 438


>sp|KAD6_THEVO|PUTATIVE adenylate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GPPGA 6
GPPGA
Sbjct: 9 GPPGA 13


>sp|KCY_HALWD|CYTIDYLATE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GPPGA 6
GPPGA
Sbjct: 7 GPPGA 11


>sp|GSA_METJA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GPPGAPGIP 10
G P +PGIP
Sbjct: 162 GHPNSPGIP 170


>sp|TRUA_METAR|TRNA pseudouridine synthase A|Methanocella arvoryzae (strain DSM 22066

Query: 3 PPGAPG 8
PP APG
Sbjct: 211 PPAAPG 216


>sp|DNAJ_METAC|CHAPERONE protein DnaJ|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EGPPGAPGIP 10
EG G PG P
Sbjct: 235 EGDSGEPGAP 244


>sp|FAU1_HYPBU|PROBABLE ribonuclease FAU-1|Hyperthermus butylicus (strain DSM 5456

Query: 1 EGPPG 5
EGPPG
Sbjct: 239 EGPPG 243


>sp|DNAJ_METMZ|CHAPERONE protein DnaJ|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 EGPPGAPGIP 10
EG G PG P
Sbjct: 235 EGDAGEPGAP 244


>sp|DNAJ_METMA|CHAPERONE protein DnaJ|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EGPPGAPGIP 10
EG G PG P
Sbjct: 235 EGDAGEPGAP 244


>sp|AROA_METMA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosarcina mazei (strain ATCC

Query: 1 EGPPGAPGIP 10
+G G PGIP
Sbjct: 71 QGSNGKPGIP 80


>sp|Y249_PYRAB|PUTATIVE GTPase PYRAB02490|Pyrococcus abyssi (strain GE5 /

Query: 2 GPPGA 6
GPPGA
Sbjct: 52 GPPGA 56


>sp|FLA1_THEVO|FLAGELLIN B1|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EGPPGAPGI 9
+ P G+PG+
Sbjct: 222 QAPVGSPGV 230


>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 432 EGPKGGPGM 440


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 437 EGPKGGPGM 445


>sp|ILVD_METBU|DIHYDROXY-ACID dehydratase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 434 EGPKGGPGM 442


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 431 EGPKGGPGM 439


>sp|ILVD_METST|DIHYDROXY-ACID dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 431 EGPKGGPGM 439


>sp|ILVD_METMP|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 430 EGPSGGPGM 438


>sp|ILVD_METM6|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C6 /

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 430 EGPSGGPGM 438


>sp|GSA_METKA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanopyrus kandleri (strain AV19 /

Query: 2 GPPGAPGIP 10
G P +PGIP
Sbjct: 164 GAPDSPGIP 172


>sp|ILVD_METVS|DIHYDROXY-ACID dehydratase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 430 EGPSGGPGM 438


>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 431 EGPKGGPGM 439


>sp|ILVD_METS3|DIHYDROXY-ACID dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 431 EGPKGGPGM 439


>sp|ILVD_METM7|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C7 /

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 430 EGPSGGPGM 438


>sp|ILVD_METM5|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C5 /

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 430 EGPSGGPGM 438


>sp|ILVD_METTH|DIHYDROXY-ACID dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 431 EGPKGGPGM 439


>sp|ILVD1_METAC|DIHYDROXY-ACID dehydratase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 434 EGPKGGPGM 442


>sp|PYRH_METAC|URIDYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GPPGAPGIP 10
GP G P IP
Sbjct: 84 GPDGYPEIP 92


>sp|Y274_PYRHO|PUTATIVE GTPase PH0274|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GPPGA 6
GPPGA
Sbjct: 54 GPPGA 58


>sp|RS4E_HALLT|SMALL ribosomal subunit protein eS4|Halorubrum lacusprofundi (strain

Query: 2 GPPGAPGIP 10
GP G G+P
Sbjct: 30 GPHGEAGVP 38


>sp|ILVD_METMA|DIHYDROXY-ACID dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 434 EGPKGGPGM 442


>sp|ILVD_METBF|DIHYDROXY-ACID dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 434 EGPKGGPGM 442


>sp|ILVD2_METAC|DIHYDROXY-ACID dehydratase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 434 EGPKGGPGM 442


>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 439 EGPKGGPGM 447


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 2 GPPGAPGIP 10
G PG+ GIP
Sbjct: 1032 GTPGSYGIP 1040


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 428 EGPKGGPGM 436


>sp|ILVD_HALMA|DIHYDROXY-ACID dehydratase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 450 EGPQGGPGM 458


>sp|ILVD_META3|DIHYDROXY-ACID dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 430 EGPAGGPGM 438


>sp|ACYP_PYRAR|ACYLPHOSPHATASE arsenaticum (strain DSM 13514

Query: 2 GPPGA 6
GPPGA
Sbjct: 66 GPPGA 70


>sp|ILVD_METKA|DIHYDROXY-ACID dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 430 EGPAGGPGM 438


>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 431 EGPAGGPGM 439


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 PPGAP 7
PPGAP
Sbjct: 408 PPGAP 412


>sp|ILVD_NATPD|DIHYDROXY-ACID dehydratase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 465 EGPEGGPGM 473


>sp|RS6E_PYRAR|SMALL ribosomal subunit protein eS6|Pyrobaculum arsenaticum (strain DSM

Query: 1 EGPPGAPGIP 10
EG P PG+P
Sbjct: 64 EGAPMVPGVP 73


>sp|RS4E_NATPD|SMALL ribosomal subunit protein eS4|Natronomonas pharaonis (strain ATCC

Query: 2 GPPGAPGIP 10
GP G G+P
Sbjct: 30 GPHGEEGVP 38


>sp|RS4E_HALSA|SMALL ribosomal subunit protein eS4|Halobacterium salinarum (strain

Query: 2 GPPGAPGIP 10
GP G G+P
Sbjct: 30 GPHGESGVP 38


>sp|RS4E_HALS3|SMALL ribosomal subunit protein eS4|Halobacterium salinarum (strain

Query: 2 GPPGAPGIP 10
GP G G+P
Sbjct: 30 GPHGESGVP 38


>sp|KAD_HALMA|ADENYLATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GPPGA 6
GPPGA
Sbjct: 10 GPPGA 14


>sp|ACYP_PYRCJ|ACYLPHOSPHATASE calidifontis (strain DSM 21063

Query: 2 GPPGA 6
GPPGA
Sbjct: 81 GPPGA 85


>sp|RS6E_PYRNV|SMALL ribosomal subunit protein eS6|Pyrobaculum neutrophilum (strain

Query: 1 EGPPGAPGIP 10
EG P PGIP
Sbjct: 64 EGAPMHPGIP 73


>sp|ILVD_IGNH4|DIHYDROXY-ACID dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EGPPGAPGI 9
EGP G PG+
Sbjct: 431 EGPRGGPGM 439




99|SequenceR|500|491|GKGGREGPPG

>sp|FAU1_HYPBU|PROBABLE ribonuclease FAU-1|Hyperthermus butylicus (strain DSM 5456

Query: 2 KGGREGPPG 10
K EGPPG
Sbjct: 235 KRAEEGPPG 243


>sp|RL31_THEVO|LARGE ribosomal subunit protein eL31|Thermoplasma volcanium (strain

Query: 2 KGGREGPP 9
K GRE PP
Sbjct: 62 KKGREKPP 69


>sp|GCK_SULTO|GLYCERATE 2-kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GKGGREG 7
GKGGR G
Sbjct: 307 GKGGRNG 313


>sp|CCA_METJA|CCA-ADDING enzyme|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 REGPP 9
REGPP
Sbjct: 365 REGPP 369


>sp|NDK_STAMF|NUCLEOSIDE diphosphate kinase|Staphylothermus marinus (strain ATCC 43588

Query: 4 GREGPPG 10
GRE PPG
Sbjct: 95 GREAPPG 101


>sp|PSB2_AERPE|PROTEASOME subunit beta 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 GGREGPPG 10
GG EGP G
Sbjct: 7 GGLEGPAG 14


>sp|HIS7_CENSY|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Cenarchaeum symbiosum (strain A)

Query: 5 REGPP 9
REGPP
Sbjct: 183 REGPP 187


>sp|HTR13_HALS3|TRANSDUCER protein Htr13|Halobacterium salinarum (strain ATCC 29341

Query: 1 GKGGREGPPG 10
G G +GPP
Sbjct: 102 GDGPTDGPPA 111


>sp|Y2248_HALVD|UNCHARACTERIZED motility-related protein HVO_2248|Haloferax volcanii (strain ATCC

Query: 3 GGREGP 8
GGR+GP
Sbjct: 219 GGRKGP 224


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 GGREGP 8
GG EGP
Sbjct: 186 GGNEGP 191


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 GGREGP 8
GG EGP
Sbjct: 186 GGNEGP 191


>sp|HIS6_HALWD|IMIDAZOLE glycerol phosphate synthase subunit|Haloquadratum walsbyi (strain

Query: 2 KGGREG 7
KGGREG
Sbjct: 162 KGGREG 167


>sp|HIS6_HALMA|IMIDAZOLE glycerol phosphate synthase subunit|Haloarcula marismortui (strain

Query: 2 KGGREG 7
KGGREG
Sbjct: 163 KGGREG 168


>sp|UVRC_HALLT|UVRABC system protein C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 KGGREGPPG 10
+GGRE P G
Sbjct: 371 RGGREDPVG 379


>sp|RL4_METHJ|LARGE ribosomal subunit protein uL4|Methanospirillum hungatei JF-1

Query: 1 GKGGREGPP 9
KGGRE P
Sbjct: 85 AKGGREAHP 93


>sp|RL4_METB6|LARGE ribosomal subunit protein uL4|Methanoregula boonei (strain DSM

Query: 1 GKGGREGPP 9
KGGRE P
Sbjct: 85 AKGGREAHP 93


>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 3 GGREGP 8
GGREGP
Sbjct: 277 GGREGP 282


>sp|FAEHP_METB6|BIFUNCTIONAL enzyme Fae/Hps|Methanoregula boonei (strain DSM 21154

Query: 3 GGREGPPG 10
G +EGP G
Sbjct: 23 GSKEGPVG 30


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 GGREGP 8
GG EGP
Sbjct: 189 GGNEGP 194


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 1 GKGGRE 6
GKGG+E
Sbjct: 527 GKGGKE 532




100|SequenceR|505|496|QSGKSGKGGR

>sp|GCK_SULTO|GLYCERATE 2-kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GKSGKGGR 10
GK+GKGGR
Sbjct: 304 GKAGKGGR 311


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 1 QSGKSGKGG 9
+ GKSGK G
Sbjct: 136 EGGKSGKNG 144


>sp|KUP_METBF|PROBABLE potassium transport system protein|Methanosarcina barkeri (strain

Query: 3 GKSGKGG 9
GK G+GG
Sbjct: 70 GKKGEGG 76


>sp|KUP_METAC|PROBABLE potassium transport system protein|Methanosarcina acetivorans

Query: 3 GKSGKGG 9
GK G+GG
Sbjct: 70 GKKGEGG 76


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 4 KSGKGGR 10
K+GKGG+
Sbjct: 881 KAGKGGK 887


>sp|MTD_METMA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina mazei

Query: 2 SGKSGK 7
SGKSGK
Sbjct: 165 SGKSGK 170


>sp|FLAB2_ARCFU|PROBABLE flagellin 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QSGKSGKGGR 10
Q+G SGK G+
Sbjct: 82 QTGSSGKVGQ 91




101|SequenceR|510|501|SGKPGQSGKS

>sp|GVPN_HALMT|GAS vesicle ATPase GvpN|Haloferax mediterranei (strain ATCC 33500

Query: 4 PGQSGKS 10
PGQ GKS
Sbjct: 200 PGQRGKS 206


>sp|G3P_NATPD|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GKPGQSGK 9
G PGQ+G+
Sbjct: 171 GDPGQTGR 178


>sp|Y1659_ARCFU|UNCHARACTERIZED protein AF_1659|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GKPGQSGK 9
G+PG+ GK
Sbjct: 62 GEPGEDGK 69


>sp|DPS_PYRFU|DNA protection during starvation protein|Pyrococcus furiosus (strain

Query: 2 GKPGQS 7
GKPG+S
Sbjct: 170 GKPGES 175




102|SequenceR|515|506|GPSGRSGKPG

>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 SGRSGKPG 10
SGR+G+PG
Sbjct: 382 SGRAGRPG 389


>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 SGRSGKPG 10
SGR+G+PG
Sbjct: 383 SGRAGRPG 390


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 3 SGRSGKPG 10
SGR+G+PG
Sbjct: 387 SGRAGRPG 394


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 SGRSGKPG 10
SGR+G+PG
Sbjct: 380 SGRAGRPG 387


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 3 SGRSGKPG 10
SGR+G+PG
Sbjct: 387 SGRAGRPG 394


>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SGRSGKPG 10
+GR+G+PG
Sbjct: 367 AGRAGRPG 374


>sp|HELS_CALMQ|ATP-DEPENDENT DNA helicase Hel308|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 SGRSGKPG 10
+GR+G+PG
Sbjct: 380 AGRAGRPG 387


>sp|HELS_THEVO|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma volcanium (strain ATCC 51530

Query: 4 GRSGKPG 10
GR+G+PG
Sbjct: 358 GRAGRPG 364


>sp|HELS_THEAC|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 GRSGKPG 10
GR+G+PG
Sbjct: 358 GRAGRPG 364


>sp|HELS_METVS|ATP-DEPENDENT DNA helicase Hel308|Methanococcus vannielii (strain ATCC 35089

Query: 4 GRSGKPG 10
GR+G+PG
Sbjct: 380 GRAGRPG 386


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 4 GRSGKPG 10
GR+G+PG
Sbjct: 875 GRAGRPG 881


>sp|H669_METJA|PROBABLE ATP-dependent RNA helicase MJ0669|Methanocaldococcus jannaschii

Query: 1 GPSGRSGKPG 10
G +GR+GK G
Sbjct: 327 GRTGRAGKKG 336


>sp|Y1584_ARCFU|UNCHARACTERIZED protein AF_1584|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GRSGKPG 10
GRS KPG
Sbjct: 50 GRSKKPG 56


>sp|HELS_METTH|ATP-DEPENDENT DNA helicase Hel308|Methanothermobacter thermautotrophicus (strain

Query: 3 SGRSGKP 9
SGR+G+P
Sbjct: 362 SGRAGRP 368


>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 SGRSGKPG 10
+GR+G+PG
Sbjct: 374 AGRAGRPG 381


>sp|HELS_NATPD|ATP-DEPENDENT DNA helicase Hel308|Natronomonas pharaonis (strain ATCC 35678

Query: 4 GRSGKPG 10
GR+G+PG
Sbjct: 381 GRAGRPG 387


>sp|HELS_HALMA|ATP-DEPENDENT DNA helicase Hel308|Haloarcula marismortui (strain ATCC 43049

Query: 4 GRSGKPG 10
GR+G+PG
Sbjct: 381 GRAGRPG 387


>sp|HELS_AERPE|ATP-DEPENDENT DNA helicase Hel308|Aeropyrum pernix (strain ATCC 700893

Query: 3 SGRSGKPG 10
+GR+G+PG
Sbjct: 377 AGRAGRPG 384


>sp|PELO_THEVO|PROTEIN pelota homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 3 SGRSGK 8
SGRSGK
Sbjct: 161 SGRSGK 166


>sp|PELO_THEAC|PROTEIN pelota homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 SGRSGK 8
SGRSGK
Sbjct: 161 SGRSGK 166


>sp|RS4E_HALSA|SMALL ribosomal subunit protein eS4|Halobacterium salinarum (strain

Query: 1 GPSGRSGKP 9
GP G SG P
Sbjct: 30 GPHGESGVP 38


>sp|RS4E_HALS3|SMALL ribosomal subunit protein eS4|Halobacterium salinarum (strain

Query: 1 GPSGRSGKP 9
GP G SG P
Sbjct: 30 GPHGESGVP 38


>sp|RL1_METKA|LARGE ribosomal subunit protein uL1|Methanopyrus kandleri (strain AV19 /

Query: 1 GPSGRSGKP 9
GP G+ KP
Sbjct: 126 GPRGKMAKP 134


>sp|GLNB1_METBA|NITROGEN fixation nifHD1 region GlnB-like|Methanosarcina barkeri

Query: 5 RSGKPG 10
R+GKPG
Sbjct: 99 RTGKPG 104


>sp|DAPAT_METST|LL-DIAMINOPIMELATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 SGRSGKPG 10
+GRSGK G
Sbjct: 143 AGRSGKMG 150


>sp|RS4E_HALMA|SMALL ribosomal subunit protein eS4|Haloarcula marismortui (strain ATCC

Query: 1 GPSGRSGKP 9
GP G SG P
Sbjct: 30 GPHGESGVP 38


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 4 GRSGKPG 10
GR G+PG
Sbjct: 571 GRMGRPG 577


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 4 GRSGKPG 10
GR+G+PG
Sbjct: 389 GRAGRPG 395


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 4 GRSGKPG 10
GR+G+PG
Sbjct: 389 GRAGRPG 395


>sp|DTDA_HALWD|D-AMINOACYL-TRNA deacylase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GPSGRSGKPG 10
GP+ G+PG
Sbjct: 92 GPAEYGGEPG 101


>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 4 GRSGKP 9
GR+GKP
Sbjct: 182 GRNGKP 187




103|SequenceR|520|511|QPGPKGPSGR

>sp|RS3A_AERPE|SMALL ribosomal subunit protein eS1|Aeropyrum pernix (strain ATCC 700893

Query: 2 PGPKGP 7
PGP GP
Sbjct: 195 PGPNGP 200


>sp|Y1232_METJA|UNCHARACTERIZED protein MJ1232|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PGPKG 6
PGPKG
Sbjct: 58 PGPKG 62


>sp|Y213_METKA|UPF0282 protein MK0213|Methanopyrus kandleri (strain AV19 /

Query: 1 QPGPKGPSG 9
QP P GP G
Sbjct: 154 QPLPHGPEG 162


>sp|IPK_THEAC|ISOPENTENYL phosphate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PGPKGP 7
PGPK P
Sbjct: 59 PGPKNP 64


>sp|ILVC_METS3|KETOL-ACID reductoisomerase (NADP(+))|Methanobrevibacter smithii (strain ATCC

Query: 3 GPKGPSGR 10
PKGP R
Sbjct: 128 APKGPGSR 135


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 3 GPKGPSG 9
GP GP+G
Sbjct: 217 GPMGPTG 223


>sp|DTDA_HYPBU|D-AMINOACYL-TRNA deacylase|Hyperthermus butylicus (strain DSM 5456

Query: 2 PGPKGPSG 9
PGP+ P G
Sbjct: 91 PGPEAPYG 98


>sp|TRPG_METTH|ANTHRANILATE synthase component 2|Methanothermobacter thermautotrophicus

Query: 2 PGPKGPSGR 10
PGP PS R
Sbjct: 59 PGPGNPSRR 67


>sp|ADH_SACS2|NAD-DEPENDENT alcohol dehydrogenase|Saccharolobus solfataricus (strain ATCC

Query: 2 PGPKGP 7
P PKGP
Sbjct: 21 PKPKGP 26


>sp|MTD_METHJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanospirillum

Query: 2 PGPKG 6
PGPKG
Sbjct: 73 PGPKG 77


>sp|DPO42_METMA|DNA polymerase IV 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PKGPSGR 10
PKG SGR
Sbjct: 48 PKGGSGR 54




104|SequenceR|525|516|DGSSGQPGPK

>sp|NDK_THEVO|NUCLEOSIDE diphosphate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DGSSGQPG 8
DGS QPG
Sbjct: 92 DGSKAQPG 99


>sp|COXX1_CENSY|PROTOHEME IX farnesyltransferase 1|Cenarchaeum symbiosum (strain A)

Query: 3 SSGQPGP 9
S+G+PGP
Sbjct: 33 SAGEPGP 39


>sp|NDK_THEAC|NUCLEOSIDE diphosphate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DGSSGQPG 8
DGS QPG
Sbjct: 93 DGSKAQPG 100


>sp|COXX_HALMA|PROTOHEME IX farnesyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DGSSGQPG 8
DGS G PG
Sbjct: 333 DGSVGLPG 340


>sp|Y305_METJA|UNCHARACTERIZED protein MJ0305|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GSSGQPGP 9
GS+G+ GP
Sbjct: 107 GSAGKEGP 114


>sp|RL10E_THEGJ|LARGE ribosomal subunit protein uL16|Thermococcus gammatolerans (strain

Query: 5 GQPGPK 10
G PGPK
Sbjct: 25 GAPGPK 30


>sp|RL10E_THEON|LARGE ribosomal subunit protein uL16|Thermococcus onnurineus (strain

Query: 5 GQPGPK 10
G PGPK
Sbjct: 25 GAPGPK 30


>sp|RL10E_THEKO|LARGE ribosomal subunit protein uL16|Thermococcus kodakarensis (strain

Query: 5 GQPGPK 10
G PGPK
Sbjct: 25 GAPGPK 30


>sp|RTCA_PYRHO|RNA 3'-terminal phosphate cyclase|Pyrococcus horikoshii (strain ATCC

Query: 1 DGSSGQPG 8
DG+ G+PG
Sbjct: 326 DGNVGEPG 333


>sp|RL10E_PYRFU|LARGE ribosomal subunit protein uL16|Pyrococcus furiosus (strain ATCC

Query: 5 GQPGPK 10
G PGPK
Sbjct: 25 GAPGPK 30




105|SequenceR|530|521|GPPGPDGSSG

>sp|RIBL_METMJ|FAD synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GPPGPDGSSG 10
GPP P GS G
Sbjct: 138 GPPDPTGSHG 147


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 2 PPGPDGSS 9
PPGPD S+
Sbjct: 542 PPGPDASA 549


>sp|HISX_METBF|HISTIDINOL dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PPGPDGS 8
PP PDGS
Sbjct: 161 PPRPDGS 167


>sp|Y1841_ARCFU|PUTATIVE ABC transporter ATP-binding protein|Archaeoglobus fulgidus

Query: 5 PDGSSG 10
PDGS+G
Sbjct: 18 PDGSAG 23


>sp|COXX1_CENSY|PROTOHEME IX farnesyltransferase 1|Cenarchaeum symbiosum (strain A)

Query: 1 GPPGPD 6
G PGPD
Sbjct: 35 GEPGPD 40


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PPGPDG 7
P GPDG
Sbjct: 350 PVGPDG 355


>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 GPDGSS 9
GPDG+S
Sbjct: 76 GPDGTS 81


>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain ATCC

Query: 2 PPGPDGS 8
P GPDGS
Sbjct: 141 PNGPDGS 147


>sp|RFCL_METAC|REPLICATION factor C large subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 PPGPDGS 8
PPGP S
Sbjct: 483 PPGPHSS 489


>sp|CSD_HALSA|PROBABLE cysteine desulfurase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GPPGPD 6
GPPG D
Sbjct: 333 GPPGDD 338




106|SequenceR|535|526|EKGPPGPPGP

>sp|TRMY_METM5|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 GPPGPP 8
GPP PP
Sbjct: 58 GPPNPP 63


>sp|Y520_METJA|PUTATIVE NADH-ubiquinone oxidoreductase MJ0520|Methanocaldococcus

Query: 2 KGPPGPP 8
+G PGPP
Sbjct: 37 QGRPGPP 43


>sp|TRUA_THESM|TRNA pseudouridine synthase A|Thermococcus sibiricus (strain DSM 12597

Query: 1 EKGPPGPP 8
+K PP PP
Sbjct: 209 KKLPPAPP 216


>sp|TRUA_PYRAB|TRNA pseudouridine synthase A|Pyrococcus abyssi (strain GE5 /

Query: 1 EKGPPGPP 8
+K PP PP
Sbjct: 206 KKVPPAPP 213


>sp|TRUA_PYRFU|TRNA pseudouridine synthase A|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KGPPGPP 8
K PP PP
Sbjct: 207 KVPPAPP 213


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GPPGPPGP 10
GPP P P
Sbjct: 43 GPPYPSSP 50


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GPPGPPGP 10
GPP P P
Sbjct: 43 GPPYPSSP 50


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 GPPGPPGP 10
GPP P P
Sbjct: 46 GPPYPSSP 53


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 GPPGPPGP 10
GPP P P
Sbjct: 46 GPPYPSSP 53


>sp|Y1446_ARCFU|UNCHARACTERIZED protein AF_1446|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EKGPPGPP 8
EK PP PP
Sbjct: 78 EKLPPWPP 85


>sp|RS3A_AERPE|SMALL ribosomal subunit protein eS1|Aeropyrum pernix (strain ATCC 700893

Query: 5 PGPPGP 10
PGP GP
Sbjct: 195 PGPNGP 200


>sp|TRMY_PYRHO|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus horikoshii

Query: 3 GPPGPP 8
GPP PP
Sbjct: 58 GPPSPP 63


>sp|SRP54_METLZ|SIGNAL recognition particle 54 kDa|Methanocorpusculum labreanum (strain

Query: 1 EKGPPGPPGP 10
+KG GP GP
Sbjct: 436 QKGGMGPMGP 445


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 PPGPPGP 10
PPG P P
Sbjct: 410 PPGKPSP 416


>sp|FAU1_HYPBU|PROBABLE ribonuclease FAU-1|Hyperthermus butylicus (strain DSM 5456

Query: 1 EKGPPG 6
E+GPPG
Sbjct: 238 EEGPPG 243


>sp|TRMY_PYRAB|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus abyssi

Query: 3 GPPGPP 8
GPP PP
Sbjct: 58 GPPDPP 63


>sp|TRUA_THEGJ|TRNA pseudouridine synthase A|Thermococcus gammatolerans (strain DSM

Query: 1 EKGPPGPP 8
+K PP PP
Sbjct: 210 KKVPPAPP 217


>sp|Y1154_METTH|UNIVERSAL stress protein MTH_1154|Methanothermobacter thermautotrophicus

Query: 1 EKGPPGPPGP 10
EKG GP P
Sbjct: 73 EKGLTGPENP 82


>sp|ADH_SACS2|NAD-DEPENDENT alcohol dehydrogenase|Saccharolobus solfataricus (strain ATCC

Query: 1 EKGPPGPPGP 10
E G P P GP
Sbjct: 17 EIGVPKPKGP 26


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 2 KGPPGPP 8
K PP PP
Sbjct: 368 KAPPRPP 374


>sp|Y1538_METTM|UNIVERSAL stress protein MTBMA_c15380|Methanothermobacter marburgensis

Query: 1 EKGPPGPPGP 10
EKG GP P
Sbjct: 70 EKGLTGPENP 79


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 3 GPPGPPGP 10
P GPP P
Sbjct: 320 APSGPPRP 327


>sp|RNP4_AERPE|RIBONUCLEASE P protein component 4|Aeropyrum pernix (strain ATCC 700893

Query: 1 EKGPPGPP 8
+KGP GPP
Sbjct: 136 DKGPQGPP 143


>sp|TRUA_THEKO|TRNA pseudouridine synthase A|Thermococcus kodakarensis (strain ATCC

Query: 1 EKGPPGPP 8
+K PP PP
Sbjct: 210 KKIPPAPP 217




107|SequenceR|540|531|PGPLGEKGPP

>sp|IF2B_SULAC|TRANSLATION initiation factor 2 subunit|Sulfolobus acidocaldarius (strain

Query: 1 PGPLGEKG 8
PG LGE G
Sbjct: 74 PGSLGENG 81


>sp|Y360_METJA|UNCHARACTERIZED protein MJ0360|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GPLGEKG 8
GP+GE+G
Sbjct: 113 GPIGEEG 119


>sp|G3P2_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 PGPLGEKGPP 10
PG +GEK P
Sbjct: 88 PGGIGEKNKP 97


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 1 PGPLGEKGPP 10
P P+GE G P
Sbjct: 359 PSPVGEPGAP 368


>sp|RS4E_NATPD|SMALL ribosomal subunit protein eS4|Natronomonas pharaonis (strain ATCC

Query: 2 GPLGEKGPP 10
GP GE+G P
Sbjct: 30 GPHGEEGVP 38


>sp|G3P1_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 PGPLGEKGPP 10
PG +GEK P
Sbjct: 88 PGGIGEKNKP 97


>sp|G3P1_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PGPLGEKGPP 10
PG +GEK P
Sbjct: 88 PGGVGEKNKP 97


>sp|RS4E_HALSA|SMALL ribosomal subunit protein eS4|Halobacterium salinarum (strain

Query: 2 GPLGEKGPP 10
GP GE G P
Sbjct: 30 GPHGESGVP 38


>sp|RS4E_HALS3|SMALL ribosomal subunit protein eS4|Halobacterium salinarum (strain

Query: 2 GPLGEKGPP 10
GP GE G P
Sbjct: 30 GPHGESGVP 38


>sp|G3P_METMJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PGPLGEKGPP 10
PG +GEK P
Sbjct: 87 PGGVGEKNRP 96


>sp|RS4E_HALLT|SMALL ribosomal subunit protein eS4|Halorubrum lacusprofundi (strain

Query: 2 GPLGEKGPP 10
GP GE G P
Sbjct: 30 GPHGEAGVP 38


>sp|PYRG_METST|CTP synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PGPLGEKG 8
PG GE+G
Sbjct: 351 PGGFGERG 358


>sp|Y076_METFV|UNCHARACTERIZED protein Mfer_0076|Methanothermus fervidus (strain ATCC 43054

Query: 2 GPLGEKGP 9
GPL KGP
Sbjct: 146 GPLTFKGP 153


>sp|RS4E_HALMA|SMALL ribosomal subunit protein eS4|Haloarcula marismortui (strain ATCC

Query: 2 GPLGEKGPP 10
GP GE G P
Sbjct: 30 GPHGESGVP 38


>sp|PYRG_METTH|CTP synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PGPLGEKG 8
PG GE+G
Sbjct: 353 PGGFGERG 360


>sp|GATB_METVS|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus vannielii (strain ATCC

Query: 3 PLGEKG 8
P+GEKG
Sbjct: 102 PIGEKG 107


>sp|PORC_METTH|PYRUVATE synthase subunit PorC|Methanothermobacter thermautotrophicus

Query: 1 PGPLGEK 7
PG +GEK
Sbjct: 155 PGKIGEK 161




108|SequenceR|545|536|GPPGQPGPLG

>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 1 GPPGQPGPLG 10
GP G P PLG
Sbjct: 213 GPGGNPDPLG 222


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PPGQPGP 8
PPG+P P
Sbjct: 410 PPGKPSP 416


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPPGQPGP 8
PPG P P
Sbjct: 111 APPGHPLP 118


>sp|RPO1C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanothermobacter thermautotrophicus

Query: 4 GQPGPLG 10
GQP PLG
Sbjct: 433 GQPIPLG 439


>sp|RPO1C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanothermobacter thermautotrophicus

Query: 4 GQPGPLG 10
GQP PLG
Sbjct: 433 GQPIPLG 439


>sp|PURP_METTH|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothermobacter thermautotrophicus

Query: 2 PPGQPGPL 9
PPG GP
Sbjct: 289 PPGMNGPF 296


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GPPGQPGPLG 10
G P +P PLG
Sbjct: 502 GNPVKPTPLG 511


>sp|PURP_SACS2|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Saccharolobus solfataricus (strain ATCC

Query: 2 PPGQPGPL 9
PPG GP
Sbjct: 263 PPGMIGPF 270


>sp|PURP_SULAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 PPGQPGPL 9
PPG GP
Sbjct: 259 PPGMIGPF 266


>sp|PURP_METJA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanocaldococcus jannaschii (strain

Query: 2 PPGQPGPL 9
PPG GP
Sbjct: 287 PPGMIGPF 294


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 GPPGQPG 7
GP G PG
Sbjct: 440 GPEGHPG 446


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 GPPGQPG 7
GP G PG
Sbjct: 440 GPEGHPG 446


>sp|PURP_SULTO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfurisphaera tokodaii (strain DSM

Query: 2 PPGQPGPL 9
PPG GP
Sbjct: 259 PPGMIGPF 266


>sp|DNLI_CENSY|DNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 PPGQPG 7
P GQPG
Sbjct: 583 PDGQPG 588


>sp|RL29_METMA|LARGE ribosomal subunit protein uL29|Methanosarcina mazei (strain ATCC

Query: 1 GPPGQPGPLG 10
G P PG +G
Sbjct: 39 GAPDNPGRIG 48


>sp|Y811_METTH|UPF0305 protein MTH_811|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 PPGQPGPLG 10
PPG P P G
Sbjct: 110 PPGTPFPGG 118


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 GPPGQPGPLG 10
GP G P PL
Sbjct: 222 GPNGNPDPLA 231


>sp|PDXT_PYRAR|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum arsenaticum (strain

Query: 1 GPPGQP 6
GP GQP
Sbjct: 100 GPTGQP 105


>sp|CAS1_THEPD|CRISPR-ASSOCIATED endonuclease Cas1|Thermofilum pendens (strain DSM 2475

Query: 3 PGQPGPL 9
PG P PL
Sbjct: 183 PGHPDPL 189


>sp|1A1D_PYRHO|PUTATIVE 1-aminocyclopropane-1-carboxylate deaminase|Pyrococcus horikoshii

Query: 2 PPGQPGPLG 10
PPG P+G
Sbjct: 155 PPGGASPIG 163


>sp|DNAJ_HALSA|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 700922

Query: 1 GPPGQPG 7
G PG+PG
Sbjct: 257 GAPGEPG 263


>sp|DNAJ_HALS3|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 29341

Query: 1 GPPGQPG 7
G PG+PG
Sbjct: 257 GAPGEPG 263


>sp|PURP_CALMQ|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Caldivirga maquilingensis (strain ATCC

Query: 2 PPGQPGP 8
PPG GP
Sbjct: 262 PPGMIGP 268


>sp|BGAL_HALLT|BETA-GALACTOSIDASE Bga|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 PPGQPGPL 9
P QPGPL
Sbjct: 499 PMSQPGPL 506


>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 1 GPPGQPGPLG 10
GP G P P+
Sbjct: 229 GPNGNPDPIA 238


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 GPPGQPGP 8
GP G P P
Sbjct: 518 GPAGAPAP 525


>sp|1A1D_PYRAB|PUTATIVE 1-aminocyclopropane-1-carboxylate deaminase|Pyrococcus abyssi

Query: 2 PPGQPGPLG 10
PPG P+G
Sbjct: 155 PPGGASPVG 163


>sp|MTD_METTM|F420-DEPENDENT methylenetetrahydromethanopterin

Query: 3 PGQPGP 8
PG PGP
Sbjct: 70 PGAPGP 75




109|SequenceR|550|541|QLGQFGPPGQ

>sp|RNZ_PICTO|RIBONUCLEASE Z|Picrophilus torridus (strain ATCC 700027

Query: 2 LGQFGPPG 9
L FGPPG
Sbjct: 89 LNIFGPPG 96


>sp|RFCL_METVS|REPLICATION factor C large subunit|Methanococcus vannielii (strain ATCC 35089

Query: 5 FGPPG 9
FGPPG
Sbjct: 45 FGPPG 49


>sp|RADB_METS3|DNA repair and recombination protein|Methanobrevibacter smithii

Query: 5 FGPPG 9
FGPPG
Sbjct: 36 FGPPG 40


>sp|KAD_THESM|ADENYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 5 FGPPG 9
FGPPG
Sbjct: 6 FGPPG 10


>sp|KAD_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 5 FGPPG 9
FGPPG
Sbjct: 6 FGPPG 10


>sp|KAD_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 FGPPG 9
FGPPG
Sbjct: 6 FGPPG 10


>sp|KAD_THEGJ|ADENYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 5 FGPPG 9
FGPPG
Sbjct: 6 FGPPG 10


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 5 FGPPG 9
FGPPG
Sbjct: 492 FGPPG 496


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 FGPPG 9
FGPPG
Sbjct: 527 FGPPG 531


>sp|KAD_PYRHO|ADENYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 FGPPG 9
FGPPG
Sbjct: 6 FGPPG 10


>sp|KAD_PYRFU|ADENYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 FGPPG 9
FGPPG
Sbjct: 6 FGPPG 10


>sp|KAD_PYRAB|ADENYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 5 FGPPG 9
FGPPG
Sbjct: 6 FGPPG 10


>sp|DPCKG_IGNH4|GTP-DEPENDENT dephospho-CoA kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LGQFGPPGQ 10
L F PPGQ
Sbjct: 70 LKAFNPPGQ 78


>sp|KAD_METAR|ADENYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 QLGQFGPPG 9
Q FGPPG
Sbjct: 2 QFVLFGPPG 10


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 FGPPG 9
FGPPG
Sbjct: 495 FGPPG 499


>sp|KAD_METMA|ADENYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 FGPPG 9
FGPPG
Sbjct: 6 FGPPG 10


>sp|GSA_SULTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QLGQFGPPGQ 10
+LG F PP Q
Sbjct: 381 KLGVFIPPSQ 390


>sp|KAD_METBF|ADENYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 5 FGPPG 9
FGPPG
Sbjct: 6 FGPPG 10


>sp|KAD_METBU|ADENYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 5 FGPPG 9
FGPPG
Sbjct: 6 FGPPG 10


>sp|KAD_METAC|ADENYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 FGPPG 9
FGPPG
Sbjct: 6 FGPPG 10


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QLGQFGPP 8
+LG FG P
Sbjct: 37 ELGDFGTP 44


>sp|SYR_PYRAB|ARGININE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 QLGQFGPP 8
+LG FG P
Sbjct: 37 ELGDFGTP 44


>sp|IXTPA_HYPBU|DITP/XTP pyrophosphatase|Hyperthermus butylicus (strain DSM 5456

Query: 2 LGQFGPP 8
L Q+GPP
Sbjct: 183 LRQYGPP 189


>sp|LEUC_PYRAE|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LGQFGPPG 9
LGQFG G
Sbjct: 179 LGQFGAEG 186




110|SequenceR|555|546|EGVTGQLGQF

>sp|DAPB_HALMA|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GVTGQLG 8
GVTGQ+G
Sbjct: 8 GVTGQMG 14


>sp|PHAC_HALMT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloferax mediterranei (strain ATCC 33500

Query: 1 EGVTGQLG 8
EG TG +G
Sbjct: 329 EGATGHIG 336




111|SequenceR|560|551|GPVGPEGVTG

>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PVGPEGV 8
PVGP+GV
Sbjct: 350 PVGPDGV 356


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain

Query: 1 GPVGPEGV 8
G VGPEGV
Sbjct: 46 GLVGPEGV 53


>sp|PROA_HALWD|GAMMA-GLUTAMYL phosphate reductase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GPVGPEGVT 9
GPVG +G+T
Sbjct: 408 GPVGLDGLT 416


>sp|PROA_METMA|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GPVGPEGV 8
GPVG EG+
Sbjct: 402 GPVGMEGL 409


>sp|PROA_METBU|GAMMA-GLUTAMYL phosphate reductase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GPVGPEGV 8
GPVG EG+
Sbjct: 402 GPVGMEGL 409


>sp|PROA_METBF|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GPVGPEGV 8
GPVG EG+
Sbjct: 402 GPVGMEGL 409


>sp|PROA_METAC|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GPVGPEGV 8
GPVG EG+
Sbjct: 402 GPVGMEGL 409


>sp|PROA_NATPD|GAMMA-GLUTAMYL phosphate reductase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GPVGPEGVT 9
GPVG +G+T
Sbjct: 395 GPVGLKGLT 403


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter

Query: 1 GPVGPEGV 8
G VGPEG+
Sbjct: 47 GLVGPEGI 54


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 5 PEGVTG 10
PEGVTG
Sbjct: 949 PEGVTG 954


>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PVGPEGVTG 10
PV PE VTG
Sbjct: 246 PVTPEDVTG 254


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 PVGPEG 7
PVGP G
Sbjct: 348 PVGPNG 353


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PVGPEG 7
PVGP G
Sbjct: 348 PVGPNG 353


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 GPVGPEGVTG 10
GP+GP + G
Sbjct: 40 GPMGPTAMAG 49


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 GPVGPEGVTG 10
GP+GP + G
Sbjct: 40 GPMGPTAMAG 49


>sp|SPEH_META3|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus aeolicus (strain ATCC

Query: 5 PEGVTG 10
P+GVTG
Sbjct: 51 PQGVTG 56


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 GPVGPEGV 8
G VGP+GV
Sbjct: 59 GLVGPKGV 66


>sp|SPEH_METM6|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus maripaludis (strain C6 /

Query: 5 PEGVTG 10
P+GVTG
Sbjct: 51 PQGVTG 56


>sp|SPEH_METM5|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus maripaludis (strain C5 /

Query: 5 PEGVTG 10
P+GVTG
Sbjct: 51 PQGVTG 56


>sp|Y2029_AERPE|UPF0284 protein APE_2029.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 PVGPEGV 8
PV PEGV
Sbjct: 74 PVSPEGV 80




112|SequenceR|565|556|PLGRPGPVGP

>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 3 GRPGPV 8
GRPGPV
Sbjct: 148 GRPGPV 153


>sp|PXPA_PYRHO|5-OXOPROLINASE subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PLGRPGPV 8
P GRPG V
Sbjct: 178 PRGRPGAV 185


>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 5 PGPVGP 10
P PVGP
Sbjct: 165 PDPVGP 170


>sp|RPO1C_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus horikoshii (strain ATCC

Query: 2 LGRPGPVG 9
+G+P PVG
Sbjct: 369 IGQPVPVG 376


>sp|RPO1C_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus abyssi (strain GE5 /

Query: 2 LGRPGPVG 9
+G+P PVG
Sbjct: 369 IGQPVPVG 376


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 3 GRPGPVGP 10
G GP+GP
Sbjct: 214 GHKGPMGP 221


>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 3 GRPGPV 8
GRPGPV
Sbjct: 148 GRPGPV 153


>sp|Y378_NANEQ|UPF0173 metal-dependent hydrolase NEQ378|Nanoarchaeum equitans (strain

Query: 1 PLGRPG 6
PLG PG
Sbjct: 109 PLGNPG 114


>sp|RPO1C_THEON|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus onnurineus (strain NA1)

Query: 2 LGRPGPVG 9
+G+P PVG
Sbjct: 367 IGQPVPVG 374


>sp|RPO1C_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LGRPGPVG 9
+G+P PVG
Sbjct: 369 IGQPVPVG 376


>sp|Y520_METJA|PUTATIVE NADH-ubiquinone oxidoreductase MJ0520|Methanocaldococcus

Query: 3 GRPGP 7
GRPGP
Sbjct: 38 GRPGP 42


>sp|RPO1C_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus kodakarensis (strain ATCC

Query: 2 LGRPGPVG 9
+G+P PVG
Sbjct: 367 IGQPVPVG 374


>sp|HMDH_HALS3|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PLGRPGPVG 9
PLG GPV
Sbjct: 75 PLGVAGPVA 83


>sp|RPO1C_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus celer

Query: 2 LGRPGPVG 9
+G+P PVG
Sbjct: 369 IGQPVPVG 376


>sp|RPO1C_THEGJ|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus gammatolerans (strain DSM

Query: 2 LGRPGPVG 9
+G+P PVG
Sbjct: 367 IGQPVPVG 374


>sp|MTD_METPE|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaerula

Query: 5 PGPVG 9
PGPVG
Sbjct: 73 PGPVG 77


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LGRPGPVG 9
LG PGP G
Sbjct: 184 LGYPGPEG 191


>sp|DAPB_METKA|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanopyrus kandleri (strain AV19 /

Query: 2 LGRPGPVGP 10
GR G VGP
Sbjct: 190 FGREGNVGP 198




113|SequenceR|570|561|VGPLGPLGRP

>sp|SUDHB_PYRFU|SULFIDE dehydrogenase subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LGPLGRP 10
LGPLG+P
Sbjct: 86 LGPLGKP 92


>sp|PUR2_METS3|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VGPLGPLGR 9
+GP PLG+
Sbjct: 67 IGPEAPLGK 75


>sp|TRM1_PYRIL|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum islandicum

Query: 2 GPL--GPLGRP 10
GPL GPLG P
Sbjct: 258 GPLWIGPLGDP 268


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 2 GPLGPLG 8
GP+GP G
Sbjct: 217 GPMGPTG 223


>sp|CDC69_HALSA|ORC1-TYPE DNA replication protein 9|Halobacterium salinarum (strain ATCC

Query: 2 GPLGP 6
GPLGP
Sbjct: 294 GPLGP 298


>sp|SRP54_METLZ|SIGNAL recognition particle 54 kDa|Methanocorpusculum labreanum (strain

Query: 1 VGPLGPL 7
+GP+GP+
Sbjct: 440 MGPMGPM 446


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 VGPLGPLGRP 10
+GP+GP P
Sbjct: 39 LGPMGPSAWP 48


>sp|PUR2_METJA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGPLGPLG 8
+GP PLG
Sbjct: 70 IGPEAPLG 77


>sp|KATG_HALSA|CATALASE-PEROXIDASE salinarum (strain ATCC 700922

Query: 1 VGPLGPLGRP 10
V P GP G P
Sbjct: 208 VNPEGPNGEP 217


>sp|KATG_HALS3|CATALASE-PEROXIDASE salinarum (strain ATCC 29341

Query: 1 VGPLGPLGRP 10
V P GP G P
Sbjct: 208 VNPEGPNGEP 217


>sp|TRUD_PYRIL|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum islandicum (strain DSM

Query: 4 LGPLGRP 10
LGPL RP
Sbjct: 288 LGPLNRP 294


>sp|TRUA_METKA|TRNA pseudouridine synthase A|Methanopyrus kandleri (strain AV19 /

Query: 4 LGPLGRP 10
LGPL RP
Sbjct: 108 LGPLNRP 114


>sp|COXX_KORCO|PROTOHEME IX farnesyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 VGPLGPL 7
+GPLGP+
Sbjct: 230 MGPLGPI 236


>sp|Y405_HALVD|PROBABLE cell surface fusion protein|Haloferax volcanii (strain ATCC 29605

Query: 2 GPLGPLGR 9
GP PLGR
Sbjct: 33 GPFEPLGR 40


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 VGPLGPLGRP 10
+GP+GP P
Sbjct: 39 LGPMGPTPFP 48


>sp|PUR2_METVS|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VGPLGPLG 8
+GP PLG
Sbjct: 70 IGPEAPLG 77


>sp|PUR2_METM5|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C5 /

Query: 1 VGPLGPLG 8
+GP PLG
Sbjct: 70 IGPEAPLG 77


>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 1 VGPLGPLGRP 10
V P GP G P
Sbjct: 225 VNPEGPNGNP 234


>sp|KATG_METB6|CATALASE-PEROXIDASE boonei (strain DSM 21154

Query: 1 VGPLGPLGRP 10
V P GP G+P
Sbjct: 220 VNPEGPNGKP 229


>sp|PUR2_METM6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C6 /

Query: 1 VGPLGPLG 8
+GP PLG
Sbjct: 70 IGPESPLG 77


>sp|PUR2_METM7|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C7 /

Query: 1 VGPLGPLG 8
+GP PLG
Sbjct: 70 IGPESPLG 77


>sp|PUR2_METMP|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VGPLGPLG 8
+GP PLG
Sbjct: 70 IGPESPLG 77


>sp|MPGP_AERPE|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GPLGPLGRP 10
GP G L RP
Sbjct: 79 GPRGSLARP 87


>sp|AROD_THEGJ|3-DEHYDROQUINATE dehydratase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 LGPLGR 9
+GPLGR
Sbjct: 167 MGPLGR 172


>sp|KATG_NATPD|CATALASE-PEROXIDASE pharaonis (strain ATCC 35678

Query: 1 VGPLGPLGRP 10
V P GP G P
Sbjct: 201 VNPEGPDGEP 210


>sp|KATG2_HALMA|CATALASE-PEROXIDASE 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 VGPLGPLGRP 10
V P GP G P
Sbjct: 219 VNPEGPDGNP 228


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 1 VGPLGPLGRP 10
V P GP G P
Sbjct: 209 VNPEGPGGNP 218


>sp|TRUD_PYRNV|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum neutrophilum (strain DSM

Query: 4 LGPLGRP 10
LGPL RP
Sbjct: 288 LGPLDRP 294




114|SequenceR|575|566|GPMGPVGPLG

>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 1 GPMGPVG 7
GPMGP G
Sbjct: 217 GPMGPTG 223


Query: 1 GPMGPVGPLG 10
G GP+GP G
Sbjct: 214 GHKGPMGPTG 223


>sp|SRP54_METLZ|SIGNAL recognition particle 54 kDa|Methanocorpusculum labreanum (strain

Query: 1 GPMGPVGPL 9
G MGP+GP+
Sbjct: 438 GGMGPMGPM 446


>sp|TRM1_HALWD|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloquadratum walsbyi

Query: 1 GPMGPVGP 8
GP P+GP
Sbjct: 117 GPESPLGP 124


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 GPMGPVGPLG 10
GPMGP G
Sbjct: 40 GPMGPTAMAG 49


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 GPMGPVGPLG 10
GPMGP G
Sbjct: 40 GPMGPTAMAG 49


>sp|HMDH_SACS2|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PMGPVGPL 9
P+G VGP+
Sbjct: 73 PLGIVGPI 80


>sp|COXX_KORCO|PROTOHEME IX farnesyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 MGPVGPL 9
MGP+GP+
Sbjct: 230 MGPLGPI 236


>sp|HMDH_PYRAB|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus abyssi (strain GE5 /

Query: 2 PMGPVGPL 9
PMG GPL
Sbjct: 75 PMGVAGPL 82


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 GPMGP 5
GPMGP
Sbjct: 40 GPMGP 44


>sp|HMDH_PYRHO|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PMGPVGPL 9
PMG GPL
Sbjct: 80 PMGVAGPL 87


>sp|APGM_PICTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Picrophilus torridus (strain ATCC 700027

Query: 1 GPMGPVGP 8
G M PVGP
Sbjct: 44 GLMDPVGP 51


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 GPMGP 5
GPMGP
Sbjct: 40 GPMGP 44


>sp|HMDH_HALVD|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Haloferax volcanii (strain ATCC 29605

Query: 2 PMGPVGPL 9
PMG GP+
Sbjct: 73 PMGVAGPV 80




115|SequenceR|580|571|PPGKPGPMGP

>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 4 KPGPMG 9
KPGPMG
Sbjct: 362 KPGPMG 367


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PPGKPGP 7
PPGKP P
Sbjct: 410 PPGKPSP 416


>sp|Y444_METMA|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina mazei

Query: 1 PPGKPGPMGP 10
P GKPG + P
Sbjct: 209 PKGKPGTLLP 218


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 3 GKPGPMGP 10
G GPMGP
Sbjct: 214 GHKGPMGP 221


>sp|TRM1_THEGJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus gammatolerans

Query: 2 PGKPGPMGP 10
PGK G GP
Sbjct: 267 PGKRGAYGP 275


>sp|TRM1_THEKO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus kodakarensis

Query: 2 PGKPGPMGP 10
P KPG GP
Sbjct: 266 PDKPGASGP 274


>sp|SRP54_METLZ|SIGNAL recognition particle 54 kDa|Methanocorpusculum labreanum (strain

Query: 3 GKPGPMGP 10
G GPMGP
Sbjct: 438 GGMGPMGP 445


>sp|RS3A_AERPE|SMALL ribosomal subunit protein eS1|Aeropyrum pernix (strain ATCC 700893

Query: 5 PGPMGP 10
PGP GP
Sbjct: 195 PGPNGP 200


>sp|PURP_METTH|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothermobacter thermautotrophicus

Query: 1 PPGKPGP 7
PPG GP
Sbjct: 289 PPGMNGP 295


>sp|CSD_METTH|PROBABLE cysteine desulfurase|Methanothermobacter thermautotrophicus (strain

Query: 2 PGKPGPMGP 10
PG G +GP
Sbjct: 213 PGHKGTLGP 221


>sp|RL10_METTH|LARGE ribosomal subunit protein uL10|Methanothermobacter

Query: 2 PGKPGPMGP 10
P KPG + P
Sbjct: 108 PAKPGAIAP 116


>sp|RS3_AERPE|SMALL ribosomal subunit protein uS3|Aeropyrum pernix (strain ATCC 700893

Query: 2 PGKPG 6
PGKPG
Sbjct: 187 PGKPG 191


>sp|TRM1_PYRAB|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus abyssi (strain

Query: 2 PGKPGPMGP 10
P KP GP
Sbjct: 267 PSKPNAYGP 275


>sp|1A1D_PYRHO|PUTATIVE 1-aminocyclopropane-1-carboxylate deaminase|Pyrococcus horikoshii

Query: 1 PPGKPGPMG 9
PPG P+G
Sbjct: 155 PPGGASPIG 163


>sp|1A1D_PYRAB|PUTATIVE 1-aminocyclopropane-1-carboxylate deaminase|Pyrococcus abyssi

Query: 1 PPGKPGPMG 9
PPG P+G
Sbjct: 155 PPGGASPVG 163


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 2 PGKPGPMGP 10
P K GP GP
Sbjct: 516 PHKAGPEGP 524


>sp|DTDA_HYPBU|D-AMINOACYL-TRNA deacylase|Hyperthermus butylicus (strain DSM 5456

Query: 3 GKPGPMGP 10
G PGP P
Sbjct: 89 GNPGPEAP 96


>sp|GATD_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Aeropyrum pernix (strain ATCC 700893

Query: 2 PGKPGPMGP 10
PG PG + P
Sbjct: 55 PGTPGALVP 63


>sp|Y811_METTH|UPF0305 protein MTH_811|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PPGKPGPMG 9
PPG P P G
Sbjct: 110 PPGTPFPGG 118


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 1 PPGKPGPMG 9
P G P P+G
Sbjct: 214 PGGNPDPLG 222


>sp|PURP_METVS|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus vannielii (strain ATCC

Query: 4 KPGPMGP 10
KPG +GP
Sbjct: 287 KPGMLGP 293




116|SequenceR|585|576|PGPPGPPGKP

>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 1 PGPPGPPGK 9
P P GPP K
Sbjct: 17 PQPEGPPEK 25


>sp|TRMY_METM5|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 2 GPPGPP 7
GPP PP
Sbjct: 58 GPPNPP 63


>sp|DNAK_NATPD|CHAPERONE protein DnaK|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PPGPPGKP 10
PP P G P
Sbjct: 437 PPAPAGTP 444


>sp|DNAK_HALSA|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 700922

Query: 3 PPGPPGKP 10
PP P G P
Sbjct: 436 PPAPAGTP 443


>sp|DNAK_HALS3|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 29341

Query: 3 PPGPPGKP 10
PP P G P
Sbjct: 436 PPAPAGTP 443


>sp|DNAK_HALMA|CHAPERONE protein DnaK|Haloarcula marismortui (strain ATCC 43049

Query: 3 PPGPPGKP 10
PP P G P
Sbjct: 436 PPAPAGTP 443


>sp|DNAK_HALWD|CHAPERONE protein DnaK|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PPGPPGKP 10
PP P G P
Sbjct: 437 PPAPAGTP 444


>sp|DNAK_HALLT|CHAPERONE protein DnaK|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 PPGPPGKP 10
PP P G P
Sbjct: 437 PPAPAGTP 444


>sp|DNAK_HALMT|CHAPERONE protein DnaK|Haloferax mediterranei (strain ATCC 33500

Query: 3 PPGPPGKP 10
PP P G P
Sbjct: 437 PPAPAGTP 444


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PGPPGPPGK 9
PG P PP K
Sbjct: 510 PGRPSPPFK 518


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PGPPGPPGK 9
PG P PP K
Sbjct: 510 PGRPSPPFK 518


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PGPPGPPGK 9
PG P PP K
Sbjct: 510 PGRPSPPFK 518


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGPPGPP 7
P P GPP
Sbjct: 100 PNPNGPP 106


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GPPGPPGKP 10
GPP G+P
Sbjct: 49 GPPTANGRP 57


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 GPPGPPGKP 10
GPP G+P
Sbjct: 50 GPPTANGRP 58


>sp|DNAJ_HALSA|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 700922

Query: 2 GPPGPPGKP 10
G PG PG P
Sbjct: 257 GAPGEPGAP 265


>sp|DNAJ_HALS3|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 29341

Query: 2 GPPGPPGKP 10
G PG PG P
Sbjct: 257 GAPGEPGAP 265


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GPPGPPGKP 10
GPP G+P
Sbjct: 49 GPPTANGRP 57


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PGPPGPP 7
PG P PP
Sbjct: 510 PGRPSPP 516


>sp|RS3A_AERPE|SMALL ribosomal subunit protein eS1|Aeropyrum pernix (strain ATCC 700893

Query: 1 PGPPGP 6
PGP GP
Sbjct: 195 PGPNGP 200


>sp|HAH4_HALMT|HALOCIN-H4 mediterranei (strain ATCC 33500

Query: 2 GPPGPPGKP 10
PPGP G P
Sbjct: 49 APPGPNGDP 57


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GPPGPPGKP 10
GP G PG P
Sbjct: 430 GPKGAPGMP 438


>sp|Y520_METJA|PUTATIVE NADH-ubiquinone oxidoreductase MJ0520|Methanocaldococcus

Query: 2 GPPGPP 7
G PGPP
Sbjct: 38 GRPGPP 43


>sp|TRMY_PYRHO|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus horikoshii

Query: 2 GPPGPP 7
GPP PP
Sbjct: 58 GPPSPP 63


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 1 PGPPGPPGKP 10
P P G PG P
Sbjct: 359 PSPVGEPGAP 368


>sp|CBID_PYRAE|COBALT-PRECORRIN-5B C(1)-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PGPPGPPGK 9
PG P PPG+
Sbjct: 103 PGLPVPPGE 111


>sp|Y1659_ARCFU|UNCHARACTERIZED protein AF_1659|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGPPGPPGK 9
PG PG GK
Sbjct: 61 PGEPGEDGK 69


>sp|DNAK_METBU|CHAPERONE protein DnaK|Methanococcoides burtonii (strain DSM 6242

Query: 3 PPGPPGKP 10
PP P G P
Sbjct: 437 PPAPRGLP 444


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 PGPPGPP 7
PG P PP
Sbjct: 515 PGDPSPP 521


>sp|DNAK_PICTO|CHAPERONE protein DnaK|Picrophilus torridus (strain ATCC 700027

Query: 3 PPGPPGKP 10
PP P G P
Sbjct: 439 PPAPRGVP 446


>sp|TRMY_PYRAB|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus abyssi

Query: 2 GPPGPP 7
GPP PP
Sbjct: 58 GPPDPP 63


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PGPPGPP 7
PG P PP
Sbjct: 514 PGRPSPP 520


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PGPPGPP 7
P P GPP
Sbjct: 110 PNPNGPP 116


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GPPGPPGKP 10
G PPGKP
Sbjct: 406 GAVPPPGKP 414


>sp|PYLC_METAC|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PGPPGPPGKP 10
P P PG+P
Sbjct: 117 PTPQDKPGRP 126


>sp|DNAK_METTH|CHAPERONE protein DnaK|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 PPGPPGKP 10
PP P G P
Sbjct: 442 PPAPRGVP 449


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PGPPGPP 7
P P GPP
Sbjct: 107 PNPNGPP 113


>sp|DNAK_METTE|CHAPERONE protein DnaK|Methanosarcina thermophila

Query: 3 PPGPPGKP 10
PP P G P
Sbjct: 437 PPAPRGVP 444


>sp|DNAK_NITMS|CHAPERONE protein DnaK|Nitrosopumilus maritimus (strain SCM1)

Query: 3 PPGPPGKP 10
PP P G P
Sbjct: 441 PPAPRGVP 448




117|SequenceR|590|581|VVAGSPGPPG

>sp|RL29_METJA|LARGE ribosomal subunit protein uL29|Methanocaldococcus jannaschii

Query: 2 VAGSPGPPG 10
VAG+P PG
Sbjct: 37 VAGAPSNPG 45


>sp|Y1232_METJA|UNCHARACTERIZED protein MJ1232|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VVAGSPGPPG 10
+V G PGP G
Sbjct: 53 LVDGVPGPKG 62


>sp|Y1804_AERPE|UNCHARACTERIZED protein APE_1804|Aeropyrum pernix (strain ATCC 700893

Query: 5 SPGPP 9
SPGPP
Sbjct: 11 SPGPP 15


>sp|TRMY_METMP|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 4 GSPGPP 9
GSP PP
Sbjct: 58 GSPNPP 63


>sp|TRMY_METM6|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 4 GSPGPP 9
GSP PP
Sbjct: 58 GSPNPP 63


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 1 VVAGSPGPP 9
VV G P PP
Sbjct: 15 VVIGEPFPP 23


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 1 VVAGSPGPP 9
VV G P PP
Sbjct: 15 VVIGEPFPP 23


>sp|RF1_PYRFU|PEPTIDE chain release factor subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VVAGSPGP 8
++ G PGP
Sbjct: 222 IIVGGPGP 229


>sp|RF1_PYRAB|PEPTIDE chain release factor subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 VVAGSPGP 8
++ G PGP
Sbjct: 219 IIVGGPGP 226


>sp|RF1_METKA|PEPTIDE chain release factor subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 VVAGSPGP 8
++ G PGP
Sbjct: 216 IIVGGPGP 223


>sp|Y520_METJA|PUTATIVE NADH-ubiquinone oxidoreductase MJ0520|Methanocaldococcus

Query: 2 VAGSPGPP 9
+ G PGPP
Sbjct: 36 IQGRPGPP 43


>sp|TRMY_METJA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocaldococcus

Query: 1 VVAGSPGPP 9
V+ G P PP
Sbjct: 55 VLYGQPNPP 63


>sp|PINA_SULAC|HOLLIDAY junction branch migration ATPase|Sulfolobus acidocaldarius (strain

Query: 1 VVAGSPG 7
++AGSPG
Sbjct: 254 LIAGSPG 260


>sp|RF1_THESM|PEPTIDE chain release factor subunit|Thermococcus sibiricus (strain DSM

Query: 1 VVAGSPGP 8
++ G PGP
Sbjct: 219 IIIGGPGP 226


>sp|RF1_THEON|PEPTIDE chain release factor subunit|Thermococcus onnurineus (strain NA1)

Query: 1 VVAGSPGP 8
++ G PGP
Sbjct: 219 IIIGGPGP 226


>sp|RF1_THEKO|PEPTIDE chain release factor subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 VVAGSPGP 8
++ G PGP
Sbjct: 219 IIIGGPGP 226


>sp|RF1_PYRHO|PEPTIDE chain release factor subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 VVAGSPGP 8
++ G PGP
Sbjct: 222 IIIGGPGP 229


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 3 AGSPGPPG 10
AG P PPG
Sbjct: 36 AGIPVPPG 43


>sp|Y120_METJA|UNCHARACTERIZED protein MJ0120|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VVAGSPG 7
+VAG+PG
Sbjct: 5 IVAGTPG 11


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 AGSPGPPG 10
AG P PPG
Sbjct: 33 AGIPVPPG 40


>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter

Query: 3 AGSPGPPG 10
AG P PPG
Sbjct: 60 AGIPVPPG 67


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 1 VVAGSPGPPG 10
+ AG P PPG
Sbjct: 36 IRAGIPVPPG 45


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 AGSPGPPG 10
AG P PPG
Sbjct: 33 AGIPVPPG 40


>sp|PINA_SACI5|HOLLIDAY junction branch migration ATPase|Saccharolobus islandicus (strain

Query: 1 VVAGSPG 7
++AG+PG
Sbjct: 252 IIAGAPG 258


>sp|DNAJ_HALSA|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 700922

Query: 4 GSPGPPG 10
G+PG PG
Sbjct: 257 GAPGEPG 263


>sp|DNAJ_HALS3|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 29341

Query: 4 GSPGPPG 10
G+PG PG
Sbjct: 257 GAPGEPG 263


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 GSPGPPG 10
G+P PPG
Sbjct: 470 GNPAPPG 476


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VVAGSPGPPG 10
VVAG PPG
Sbjct: 408 VVAGVELPPG 417


>sp|MDH_SULTO|MALATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VVAGSPGPPG 10
+ AG P PG
Sbjct: 76 ITAGKPRKPG 85


>sp|RS4E_PYRIL|SMALL ribosomal subunit protein eS4|Pyrobaculum islandicum (strain DSM

Query: 1 VVAGSPGP 8
VV SPGP
Sbjct: 24 VVRSSPGP 31


>sp|Y452_METJA|UNCHARACTERIZED protein MJ0452|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VVAGSPGPPG 10
V+ G P PP
Sbjct: 6 VIVGCPEPPA 15




118|SequenceR|595|586|QLALPVVAGS

>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QLALPVVAGS 10
++ LPVVAG+
Sbjct: 549 KMGLPVVAGN 558


>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 1 QLALPVVAGS 10
+ +LPVVAG+
Sbjct: 549 KFSLPVVAGN 558


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QLALPVVAG 9
Q+A PV+AG
Sbjct: 197 QMAYPVIAG 205


>sp|D89S1_PYRHO|DAMAGE-CONTROL phosphatase PH1575|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 ALPVVAGS 10
A+P +AGS
Sbjct: 48 AIPAIAGS 55


>sp|Y419_ARCFU|UNCHARACTERIZED protein AF_0419|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LALPVVAGS 10
L +PV+AGS
Sbjct: 195 LKMPVLAGS 203




119|SequenceR|600|591|PTPENQLALP

>sp|CBIA_METM7|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C7 /

Query: 1 PTPENQLAL 9
PTPEN+ L
Sbjct: 194 PTPENKQGL 202


>sp|SYR_PYRAE|ARGININE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PTPENQLA 8
P PEN LA
Sbjct: 538 PVPENMLA 545


>sp|RF1_THEON|PEPTIDE chain release factor subunit|Thermococcus onnurineus (strain NA1)

Query: 2 TPENQLAL 9
TPEN LAL
Sbjct: 82 TPENGLAL 89


>sp|RF1_THEKO|PEPTIDE chain release factor subunit|Thermococcus kodakarensis (strain

Query: 2 TPENQLAL 9
TPEN LAL
Sbjct: 82 TPENGLAL 89


>sp|RF1_PYRHO|PEPTIDE chain release factor subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 TPENQLAL 9
TPEN LAL
Sbjct: 85 TPENGLAL 92


>sp|RF1_PYRFU|PEPTIDE chain release factor subunit|Pyrococcus furiosus (strain ATCC

Query: 2 TPENQLAL 9
TPEN LAL
Sbjct: 85 TPENGLAL 92


>sp|RF1_PYRAB|PEPTIDE chain release factor subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 TPENQLAL 9
TPEN LAL
Sbjct: 82 TPENGLAL 89


>sp|SUCC_HALMA|SUCCINATE--COA ligase [ADP-forming] subunit beta|Haloarcula marismortui (strain

Query: 1 PTPENQLA 8
PTP +QLA
Sbjct: 18 PTPASQLA 25


>sp|CBIA_METM5|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C5 /

Query: 1 PTPENQLAL 9
PTPEN+ L
Sbjct: 194 PTPENKQKL 202


>sp|THIC_ARCFU|PHOSPHOMETHYLPYRIMIDINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TPENQLALP 10
TP LALP
Sbjct: 325 TPSEHLALP 333


>sp|THIC1_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TPENQLALP 10
TP LALP
Sbjct: 324 TPSEHLALP 332


>sp|THIC1_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TPENQLALP 10
TP LALP
Sbjct: 324 TPSEHLALP 332


>sp|HACA_METAC|PROBABLE methanogen homoaconitase large subunit|Methanosarcina acetivorans

Query: 3 PENQLALP 10
PEN ALP
Sbjct: 116 PENGFALP 123


>sp|THIC_METPE|PHOSPHOMETHYLPYRIMIDINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 TPENQLALP 10
TP LALP
Sbjct: 328 TPAEHLALP 336


>sp|THIC_METMJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 TPENQLALP 10
TP LALP
Sbjct: 328 TPAEHLALP 336


>sp|THIC_METLZ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 TPENQLALP 10
TP LALP
Sbjct: 328 TPAEHLALP 336


>sp|THIC_METHJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 TPENQLALP 10
TP LALP
Sbjct: 328 TPAEHLALP 336


>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 TPENQLALP 10
TP LALP
Sbjct: 328 TPAEHLALP 336


>sp|THIC2_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TPENQLALP 10
TP LALP
Sbjct: 328 TPAEHLALP 336


>sp|THIC2_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TPENQLALP 10
TP LALP
Sbjct: 328 TPAEHLALP 336


>sp|THIC1_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 TPENQLALP 10
TP LALP
Sbjct: 328 TPAEHLALP 336


>sp|THIC2_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 TPENQLALP 10
TP LALP
Sbjct: 324 TPSEHLALP 332


>sp|HACA_METMA|PROBABLE methanogen homoaconitase large subunit|Methanosarcina mazei

Query: 3 PENQLALP 10
PEN ALP
Sbjct: 83 PENGFALP 90


>sp|THIC1_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 TPENQLALP 10
TP LALP
Sbjct: 329 TPAEHLALP 337


>sp|RS4E_METHJ|SMALL ribosomal subunit protein eS4|Methanospirillum hungatei JF-1

Query: 1 PTPENQLALP 10
P P N+ ALP
Sbjct: 29 PGPHNKNALP 38


>sp|TRPB2_SULTO|TRYPTOPHAN synthase beta chain 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PTPENQLALP 10
P PE ALP
Sbjct: 380 PAPETSHALP 389


>sp|THIC2_METST|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 TPENQLALP 10
TP LALP
Sbjct: 328 TPAEHLALP 336


>sp|TRPB2_SACS2|TRYPTOPHAN synthase beta chain 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PTPENQLALP 10
P PE ALP
Sbjct: 380 PAPETSHALP 389


>sp|TRPB_THEAC|TRYPTOPHAN synthase beta chain|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PTPENQLALP 10
P PE ALP
Sbjct: 377 PAPETSHALP 386


>sp|THIC_METKA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 TPENQLALP 10
TP LALP
Sbjct: 329 TPAEHLALP 337


>sp|TRPB_THEVO|TRYPTOPHAN synthase beta chain|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PTPENQLALP 10
P PE ALP
Sbjct: 377 PAPETSHALP 386




120|SequenceR|605|596|NDEPAPTPEN

>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 1 NDEPAPTP 8
ND PAP P
Sbjct: 686 NDYPAPNP 693


>sp|CPGS_PYRHO|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus horikoshii (strain

Query: 1 NDEPAPTPE 9
+DEP TPE
Sbjct: 80 SDEPVLTPE 88


>sp|CPGS_PYRAB|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 NDEPAPTPE 9
+DEP TPE
Sbjct: 76 SDEPVMTPE 84


>sp|COBS_METAC|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 EPAPTPEN 10
+P P PEN
Sbjct: 170 KPLPRPEN 177


>sp|GCH1L_PYRHO|GTP cyclohydrolase 1 type 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DEPAPTP 8
DEP P P
Sbjct: 138 DEPKPLP 144


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 3 EPAPTPEN 10
EP P PEN
Sbjct: 208 EPEPKPEN 215


>sp|FPRA_METAZ|COENZYME F420H(2) oxidase|Methanobrevibacter arboriphilus

Query: 1 NDEPAPT 7
NDEP P+
Sbjct: 323 NDEPYPS 329


>sp|KUP_METHJ|PROBABLE potassium transport system protein|Methanospirillum hungatei JF-1

Query: 6 PTPEN 10
PTPEN
Sbjct: 46 PTPEN 50


>sp|CBIA_METJA|COBYRINATE a,c-diamide synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 6 PTPEN 10
PTPEN
Sbjct: 195 PTPEN 199


>sp|GLCD2_HALTV|GLUCOSE 1-dehydrogenase 2|Haloterrigena turkmenica (strain ATCC 51198

Query: 2 DEPAPTPEN 10
++P PTPEN
Sbjct: 17 EKPKPTPEN 25


>sp|RF11_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 3 EPAPTPEN 10
EPAPT N
Sbjct: 347 EPAPTAGN 354


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 3 EPAPTPEN 10
+P P PEN
Sbjct: 212 DPEPVPEN 219


>sp|GATE_METHJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanospirillum hungatei JF-1 (strain

Query: 1 NDEPAPTPEN 10
NDE P P N
Sbjct: 85 NDEEPPAPLN 94


>sp|Y338_HYPBU|UPF0200 protein Hbut_0338|Hyperthermus butylicus (strain DSM 5456

Query: 6 PTPEN 10
PTPEN
Sbjct: 51 PTPEN 55


>sp|Y1753_AERPE|UPF0200 protein APE_1753.1|Aeropyrum pernix (strain ATCC 700893

Query: 6 PTPEN 10
PTPEN
Sbjct: 52 PTPEN 56


>sp|Y2319_HALLT|UPF0179 protein Hlac_2319|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 EPAPTPEN 10
EPAP P N
Sbjct: 72 EPAPVPAN 79


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 NDEPAPTP 8
N+ P PTP
Sbjct: 410 NNYPLPTP 417


>sp|CBIA_METM7|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C7 /

Query: 6 PTPEN 10
PTPEN
Sbjct: 194 PTPEN 198


>sp|RL3_SULAC|LARGE ribosomal subunit protein uL3|Sulfolobus acidocaldarius (strain

Query: 2 DEPAPTPEN 10
DE PTP+N
Sbjct: 23 DEILPTPKN 31


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 EPAPTP 8
EP PTP
Sbjct: 26 EPEPTP 31


>sp|AGL14_HALVD|PROBABLE low-salt glycan biosynthesis reductase|Haloferax volcanii (strain

Query: 1 NDEPAPTPE 9
DEPAP E
Sbjct: 126 GDEPAPIQE 134


>sp|CBIA_METM5|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C5 /

Query: 6 PTPEN 10
PTPEN
Sbjct: 194 PTPEN 198


>sp|CPGS_METKA|CYCLIC 2,3-diphosphoglycerate synthetase|Methanopyrus kandleri (strain

Query: 1 NDEPAPTPEN 10
+DEP +P+N
Sbjct: 91 SDEPVVSPDN 100


>sp|PIMT_PYRAB|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 DEPAPTP 8
DEP P P
Sbjct: 49 DEPLPIP 55




121|SequenceR|610|601|HPPCGNDEPA

>sp|Y182_ARCFU|UNCHARACTERIZED protein AF_0182|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 CGNDEPA 10
CG+DEPA
Sbjct: 138 CGSDEPA 144


>sp|FNO_METJA|F420-DEPENDENT NADP reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CGNDEPA 10
CGNDE A
Sbjct: 161 CGNDEEA 167


>sp|TFS_SULAC|TRANSCRIPTION factor S|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PPCGNDE 8
P CGNDE
Sbjct: 73 PSCGNDE 79


>sp|RF1_METS3|PEPTIDE chain release factor subunit|Methanobrevibacter smithii (strain

Query: 2 PPCGNDE 8
P CGN+E
Sbjct: 330 PSCGNEE 336


>sp|PURA_METS3|ADENYLOSUCCINATE synthetase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 CGNDEP 9
CGND+P
Sbjct: 24 CGNDKP 29


>sp|TF2B_PYRNV|TRANSCRIPTION initiation factor IIB|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PPCGNDE 8
P CGND+
Sbjct: 38 PICGNDK 44


>sp|TF2B_PYRAE|TRANSCRIPTION initiation factor IIB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PPCGNDE 8
P CGND+
Sbjct: 38 PICGNDK 44


>sp|RGYRB_NANEQ|REVERSE gyrse subunit B|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 PCGNDEP 9
PC ND P
Sbjct: 26 PCENDYP 32


>sp|TF2B_PYRIL|TRANSCRIPTION initiation factor IIB|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PPCGND 7
P CGND
Sbjct: 38 PICGND 43


>sp|TF2B_PYRAR|TRANSCRIPTION initiation factor IIB|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PPCGND 7
P CGND
Sbjct: 38 PICGND 43


>sp|Y1230_METJA|UNCHARACTERIZED protein MJ1230|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PPCGNDE 8
P CGN E
Sbjct: 12 PKCGNTE 18


>sp|C2M5_METJA|PUTATIVE control protein C.MjaVP|Methanocaldococcus jannaschii (strain ATCC

Query: 3 PCGNDE 8
PC NDE
Sbjct: 108 PCNNDE 113


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 PPCGNDEP 9
P CG D P
Sbjct: 741 PKCGADYP 748


>sp|AATC_HALLT|A-TYPE ATP synthase subunit C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 GNDEP 9
GNDEP
Sbjct: 194 GNDEP 198


>sp|GLMM_METBF|PROBABLE phosphoglucosamine mutase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PCGNDEPA 10
PC ND+ A
Sbjct: 359 PCANDKKA 366


>sp|GLCD2_SACS2|GLUCOSE 1-dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PPCGNDE 8
PP G DE
Sbjct: 57 PPIGKDE 63


>sp|COFC_METHJ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 GNDEP 9
GNDEP
Sbjct: 88 GNDEP 92


>sp|AMPPA_METAR|AMP phosphorylase|Methanocella arvoryzae (strain DSM 22066

Query: 3 PCGND 7
PCGN+
Sbjct: 282 PCGNE 286


>sp|TF2B_METTH|TRANSCRIPTION initiation factor IIB|Methanothermobacter thermautotrophicus

Query: 2 PPCGNDE 8
P CG+D+
Sbjct: 15 PECGSDD 21


>sp|Y2739_METHJ|UPF0758 protein Mhun_2739|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PCGNDEPA 10
P GN EP+
Sbjct: 177 PSGNPEPS 184


>sp|DTDA_CENSY|D-AMINOACYL-TRNA deacylase|Cenarchaeum symbiosum (strain A)

Query: 1 HPPCGNDEPA 10
H P G D+P+
Sbjct: 129 HGPTGLDKPS 138


>sp|SODM1_HALSA|SUPEROXIDE dismutase [Mn] 1|Halobacterium salinarum (strain ATCC 700922

Query: 3 PCGNDEPA 10
P G DEP+
Sbjct: 85 PAGGDEPS 92




122|SequenceR|615|606|TFNKWHPPCG

>sp|PRIL_METJA|DNA primase large subunit PriL|Methanocaldococcus jannaschii (strain

Query: 4 KWHPPC 9
+WHPPC
Sbjct: 246 EWHPPC 251


>sp|RL10E_HALWD|LARGE ribosomal subunit protein uL16|Haloquadratum walsbyi (strain DSM

Query: 2 FNKWHPPC 9
+NK PPC
Sbjct: 156 YNKMSPPC 163


>sp|RL10E_HALLT|LARGE ribosomal subunit protein uL16|Halorubrum lacusprofundi (strain

Query: 2 FNKWHPPC 9
+NK PPC
Sbjct: 156 YNKLSPPC 163


>sp|RL10E_NATPD|LARGE ribosomal subunit protein uL16|Natronomonas pharaonis (strain ATCC

Query: 2 FNKWHPPC 9
+NK PPC
Sbjct: 157 YNKISPPC 164


>sp|CCA_HALMA|CCA-ADDING enzyme|Haloarcula marismortui (strain ATCC 43049

Query: 5 WHPP 8
WHPP
Sbjct: 204 WHPP 207


>sp|CCA_HALLT|CCA-ADDING enzyme|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 WHPP 8
WHPP
Sbjct: 203 WHPP 206


>sp|RL10E_HALSA|LARGE ribosomal subunit protein uL16|Halobacterium salinarum (strain ATCC

Query: 2 FNKWHPPC 9
+NK PPC
Sbjct: 156 YNKITPPC 163


>sp|RL10E_HALS3|LARGE ribosomal subunit protein uL16|Halobacterium salinarum (strain ATCC

Query: 2 FNKWHPPC 9
+NK PPC
Sbjct: 156 YNKITPPC 163


>sp|OFOB_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Saccharolobus solfataricus

Query: 2 FNKWHPPCG 10
+N W P CG
Sbjct: 8 WNDWCPGCG 16


>sp|NNR_HYPBU|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Hyperthermus butylicus (strain

Query: 4 KWHPPCG 10
+W PP G
Sbjct: 527 EWQPPVG 533


>sp|THII_PYRAE|TRNA sulfurtransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TFNKWHPP 8
++ KWH P
Sbjct: 410 SYKKWHLP 417


>sp|CDPAS_METKA|CDP-ARCHAEOL synthase|Methanopyrus kandleri (strain AV19 /

Query: 5 WHPP 8
WHPP
Sbjct: 138 WHPP 141


>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 3 NKWHPP 8
+KW PP
Sbjct: 517 SKWQPP 522


>sp|SYS2_METJA|TYPE-2 serine--tRNA ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 FNKWHP 7
F+ WHP
Sbjct: 493 FDDWHP 498


>sp|OFOB_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Sulfolobus sp

Query: 2 FNKWHPPCG 10
+N W P CG
Sbjct: 8 WNDWCPGCG 16


>sp|OFOB1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Sulfurisphaera tokodaii (strain

Query: 2 FNKWHPPCG 10
+N W P CG
Sbjct: 8 WNDWCPGCG 16


>sp|ILVD_SULAC|DIHYDROXY-ACID dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FNKWHPP 8
N W PP
Sbjct: 525 LNNWSPP 531


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 3 NKWHPP 8
+KW PP
Sbjct: 523 DKWSPP 528


>sp|TREZ_SACS2|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TFNKWHP 7
TFN W P
Sbjct: 13 TFNLWAP 19


>sp|Y548_METJA|UNCHARACTERIZED protein MJ0548|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KWHP 7
KWHP
Sbjct: 164 KWHP 167


>sp|DNAJ_THEAC|CHAPERONE protein DnaJ|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 KWHP 7
KWHP
Sbjct: 30 KWHP 33


>sp|RNZ_AERPE|RIBONUCLEASE Z|Aeropyrum pernix (strain ATCC 700893

Query: 1 TFNKWHP 7
+ ++WHP
Sbjct: 17 SLHRWHP 23


>sp|CBIN_METTH|COBALT transport protein CbiN|Methanothermobacter thermautotrophicus

Query: 5 WHPPCG 10
W PP G
Sbjct: 57 WEPPSG 62


>sp|DNAJ_THEVO|CHAPERONE protein DnaJ|Thermoplasma volcanium (strain ATCC 51530

Query: 4 KWHP 7
KWHP
Sbjct: 30 KWHP 33


>sp|CBIN_METTM|COBALT transport protein CbiN|Methanothermobacter marburgensis (strain

Query: 5 WHPPCG 10
W PP G
Sbjct: 57 WEPPSG 62


>sp|RL2_NANEQ|LARGE ribosomal subunit protein uL2|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 TFNKWHPP 8
T +KW PP
Sbjct: 215 TVSKWAPP 222


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 4 KWHPPCG 10
+W+PP G
Sbjct: 19 EWNPPPG 25


>sp|RL30_ARCFU|LARGE ribosomal subunit protein uL30|Archaeoglobus fulgidus (strain ATCC

Query: 4 KWHPPCG 10
KWH P G
Sbjct: 129 KWHYPRG 135


>sp|CBIN_METM5|COBALT transport protein CbiN|Methanococcus maripaludis (strain C5 /

Query: 5 WHPPCG 10
W PP G
Sbjct: 59 WEPPSG 64


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 FNKWHP 7
FN W+P
Sbjct: 597 FNYWYP 602


>sp|CBIN_METM7|COBALT transport protein CbiN|Methanococcus maripaludis (strain C7 /

Query: 5 WHPPCG 10
W PP G
Sbjct: 59 WEPPSG 64


>sp|DAPF_METKA|DIAMINOPIMELATE epimerase|Methanopyrus kandleri (strain AV19 /

Query: 5 WHPPCG 10
W P CG
Sbjct: 192 WTPACG 197


>sp|CBIN_METMP|COBALT transport protein CbiN|Methanococcus maripaludis (strain DSM

Query: 5 WHPPCG 10
W PP G
Sbjct: 59 WEPPSG 64


>sp|CBIN_METM6|COBALT transport protein CbiN|Methanococcus maripaludis (strain C6 /

Query: 5 WHPPCG 10
W PP G
Sbjct: 59 WEPPSG 64


>sp|Y1546_PYRCJ|UPF0282 protein Pcal_1546|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 WHPPCG 10
WH P G
Sbjct: 155 WHGPAG 160


>sp|OFOB2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Sulfurisphaera tokodaii (strain

Query: 2 FNKWHPPCG 10
F W P CG
Sbjct: 8 FVDWCPGCG 16


>sp|TYSY_HALVO|THYMIDYLATE synthase|Haloferax volcanii (Halobacterium volcanii)

Query: 3 NKWHP 7
N WHP
Sbjct: 161 NAWHP 165


>sp|CBIN_METVS|COBALT transport protein CbiN|Methanococcus vannielii (strain ATCC 35089

Query: 5 WHPPCG 10
W PP G
Sbjct: 59 WEPPSG 64


>sp|Y3680_PYRAE|UPF0282 protein PAE3680|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 WHPPCG 10
WH P G
Sbjct: 156 WHGPAG 161


>sp|Y1056_PYRAR|UPF0282 protein Pars_1056|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 WHPPCG 10
WH P G
Sbjct: 156 WHGPAG 161


>sp|Y021_PYRIL|UPF0282 protein Pisl_0021|Pyrobaculum islandicum (strain DSM 4184

Query: 5 WHPPCG 10
WH P G
Sbjct: 156 WHGPAG 161


>sp|Y934_PYRNV|UPF0282 protein Tneu_0934|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 WHPPCG 10
WH P G
Sbjct: 156 WHGPAG 161


>sp|HMEA_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 6 HPPC 9
HPPC
Sbjct: 123 HPPC 126




123|SequenceR|620|611|YYCKDTFNKW

>sp|Y198_METJA|UNCHARACTERIZED protein MJ0198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YYCKDTFNK 9
Y CKD FN+
Sbjct: 166 YTCKDIFNE 174


>sp|Y300_HALMA|UPF0173 metal-dependent hydrolase rrnAC0300|Haloarcula marismortui

Query: 2 YCKDTFNKW 10
YCKD F ++
Sbjct: 73 YCKDNFGEF 81


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 CKDTFNKW 10
CK FN+W
Sbjct: 761 CKRFFNEW 768


>sp|SYFB_METAR|PHENYLALANINE--TRNA ligase beta subunit|Methanocella arvoryzae (strain DSM 22066

Query: 3 CKDTFN 8
C+DTFN
Sbjct: 379 CQDTFN 384


>sp|GLCD2_VULM7|GLUCOSE 1-dehydrogenase 2|Vulcanisaeta moutnovskia (strain 768-28)

Query: 4 KDTFNKW 10
KD FN W
Sbjct: 308 KDEFNNW 314


>sp|PUS10_METV3|TRNA pseudouridine synthase Pus10|Methanococcus voltae (strain ATCC

Query: 2 YCKDTFN 8
+CKD FN
Sbjct: 163 WCKDVFN 169


>sp|GPMI_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 1 YYCKDTFNKW 10
YY D N+W
Sbjct: 188 YYAMDRDNRW 197


>sp|PTH_THEAC|PEPTIDYL-TRNA hydrolase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 KDTFNKW 10
+D FN+W
Sbjct: 40 RDVFNEW 46


>sp|RL15_METJA|LARGE ribosomal subunit protein uL15|Methanocaldococcus jannaschii

Query: 2 YCKDTFNKW 10
YC D F K+
Sbjct: 50 YCPDYFGKY 58


>sp|Y924_ARCFU|UNCHARACTERIZED protein AF_0924|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YYCKDTFNKW 10
+Y K+ F +W
Sbjct: 147 FYAKEDFEQW 156


>sp|SYR_SULAC|ARGININE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 DTFNKW 10
D FN+W
Sbjct: 569 DVFNRW 574


>sp|PGP_HALLT|PHOSPHOGLYCOLATE phosphatase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 KDTFNKW 10
+DT N+W
Sbjct: 101 RDTVNRW 107


>sp|IF2P_METAR|PROBABLE translation initiation factor IF-2|Methanocella arvoryzae (strain

Query: 1 YYCKDTFNKW 10
Y+ D F KW
Sbjct: 439 YHLIDDFRKW 448


>sp|THI4_METM7|THIAMINE thiazole synthase|Methanococcus maripaludis (strain C7 /

Query: 4 KDTFNKW 10
K TFN W
Sbjct: 18 KSTFNMW 24


>sp|THI4_METM6|THIAMINE thiazole synthase|Methanococcus maripaludis (strain C6 /

Query: 4 KDTFNKW 10
K TFN W
Sbjct: 18 KSTFNMW 24


>sp|THI4_METM5|THIAMINE thiazole synthase|Methanococcus maripaludis (strain C5 /

Query: 4 KDTFNKW 10
K TFN W
Sbjct: 18 KSTFNMW 24


>sp|T2M5_METJA|TYPE II restriction enzyme MjaV|Methanocaldococcus jannaschii (strain

Query: 1 YYCKDTFNKW 10
+Y KD NK+
Sbjct: 92 HYVKDVLNKY 101


>sp|SYR_SULTO|ARGININE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 DTFNKW 10
D FN+W
Sbjct: 574 DIFNRW 579


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 CKDTFNKW 10
KDT +KW
Sbjct: 669 AKDTLDKW 676


>sp|Y1189_METJA|UNCHARACTERIZED protein MJ1189|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YYCKDTF 7
YY KD F
Sbjct: 6 YYLKDAF 12


>sp|Y1079_METJA|UNCHARACTERIZED protein MJ1079|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YCKDTFN 8
YC + FN
Sbjct: 169 YCSEAFN 175


>sp|RL3_METLZ|LARGE ribosomal subunit protein uL3|Methanocorpusculum labreanum

Query: 2 YCKDTFNK 9
Y KDT+ K
Sbjct: 87 YVKDTYGK 94


>sp|RL3_METB6|LARGE ribosomal subunit protein uL3|Methanoregula boonei (strain DSM

Query: 2 YCKDTFNK 9
Y KDT+ K
Sbjct: 88 YTKDTYGK 95


>sp|Y2246_METAC|UNCHARACTERIZED serpin-like protein MA_2246|Methanosarcina acetivorans (strain ATCC

Query: 5 DTFNKW 10
DT NKW
Sbjct: 179 DTINKW 184


>sp|Y3388_METAC|UNCHARACTERIZED serpin-like protein MA_3388|Methanosarcina acetivorans (strain ATCC

Query: 3 CKDTFNKW 10
+DT N+W
Sbjct: 176 SRDTINEW 183


>sp|RS14Z_METHJ|SMALL ribosomal subunit protein uS14|Methanospirillum hungatei JF-1

Query: 1 YYCKDTFNKW 10
++C+ F +W
Sbjct: 37 FFCRQCFREW 46




124|SequenceR|625|616|KEVSFYYCKD

>sp|TFE_METB6|TRANSCRIPTION factor E|Methanoregula boonei (strain DSM 21154

Query: 1 KEVSFYYCKD 10
+E FY CKD
Sbjct: 114 EENDFYICKD 123


>sp|IDI2_THEVO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 SFYYCKD 10
S YYC D
Sbjct: 254 SVYYCSD 260


>sp|IDI2_THEAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 SFYYCKD 10
S YYC D
Sbjct: 254 SVYYCSD 260


>sp|Y696_METJA|UNCHARACTERIZED protein MJ0696|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KEVSFYYCKD 10
KE+S Y C D
Sbjct: 106 KEISVYLCDD 115


>sp|Y4342_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 KEVSFYYCKD 10
+ VSF+Y K+
Sbjct: 6 ENVSFFYSKN 15


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KEVSFYYCKD 10
KE+ +YC D
Sbjct: 121 KEIEQFYCPD 130


>sp|CAS1B_METRM|CRISPR-ASSOCIATED protein Cas1 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 KEVSFYYCKD 10
KE+++Y KD
Sbjct: 26 KEINYYLAKD 35




125|SequenceR|630|621|DEFIEKEVSF

>sp|RS3_THEKO|SMALL ribosomal subunit protein uS3|Thermococcus kodakarensis (strain

Query: 1 DEFIEKEV 8
DEF+EKE+
Sbjct: 18 DEFLEKEL 25


>sp|RS3_PYRHO|SMALL ribosomal subunit protein uS3|Pyrococcus horikoshii (strain ATCC

Query: 1 DEFIEKEV 8
DEF+EKE+
Sbjct: 18 DEFLEKEL 25


>sp|RS3_THEGJ|SMALL ribosomal subunit protein uS3|Thermococcus gammatolerans (strain

Query: 1 DEFIEKEV 8
DE++EKE+
Sbjct: 18 DEYLEKEL 25


>sp|RS3_PYRFU|SMALL ribosomal subunit protein uS3|Pyrococcus furiosus (strain ATCC

Query: 1 DEFIEKEV 8
DEF+EKE+
Sbjct: 18 DEFLEKEL 25


>sp|RS3_PYRAB|SMALL ribosomal subunit protein uS3|Pyrococcus abyssi (strain GE5 /

Query: 1 DEFIEKEV 8
DEF+EKE+
Sbjct: 18 DEFLEKEL 25


>sp|TRM1_HALMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloarcula marismortui

Query: 1 DEFIEK 6
DEFIEK
Sbjct: 329 DEFIEK 334


>sp|TREH_THEAC|TREHALASE acidophilum (strain ATCC 25905

Query: 1 DEFIEKEVSF 10
D+F+E+E+ F
Sbjct: 298 DDFVERELDF 307


>sp|RS3_METS3|SMALL ribosomal subunit protein uS3|Methanobrevibacter smithii (strain

Query: 1 DEFIEKEV 8
DE++EKE+
Sbjct: 17 DEYLEKEL 24


>sp|AGO_METJA|PROTEIN argonaute|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DEFIEKEVSF 10
+EFI KEV F
Sbjct: 17 EEFIPKEVHF 26


>sp|SYR_METAR|ARGININE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DEFIEKEVS 9
DE +EKE+S
Sbjct: 204 DEAVEKEIS 212


>sp|T1R2_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 DEFIEKEVS 9
DEFIEK ++
Sbjct: 60 DEFIEKAIN 68


>sp|PMDHL_THEKO|PHOSPHOMEVALONATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 DEFIEKEV 8
DEF+EK++
Sbjct: 86 DEFMEKQM 93


>sp|RS3_METTH|SMALL ribosomal subunit protein uS3|Methanothermobacter

Query: 1 DEFIEKEV 8
DE++EKE+
Sbjct: 17 DEYLEKEL 24


>sp|RS3_THEON|SMALL ribosomal subunit protein uS3|Thermococcus onnurineus (strain

Query: 1 DEFIEKEV 8
DE++EKE+
Sbjct: 18 DEYLEKEL 25




126|SequenceR|635|626|CFLKADEFIE

>sp|GCH3_METJA|GTP cyclohydrolase III|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CFLKADEFIE 10
C LK D+F+E
Sbjct: 246 CTLKQDDFLE 255


>sp|RFCL_METMJ|REPLICATION factor C large subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 CFLKADEFI 9
C +ADE+I
Sbjct: 278 CLARADEYI 286


>sp|KDPB_THEVO|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma volcanium (strain ATCC

Query: 2 FLKADEFIE 10
F ADEFIE
Sbjct: 395 FQVADEFIE 403


>sp|KDPB_THEAC|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 FLKADEFIE 10
F ADEFIE
Sbjct: 392 FHVADEFIE 400


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 CFLKADEFIE 10
CF ADE +E
Sbjct: 97 CFKVADEIVE 106


>sp|CCA_THEKO|CCA-ADDING enzyme|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FLKADEFIE 10
+ KADEF++
Sbjct: 262 YFKADEFLQ 270


>sp|SYR_METST|ARGININE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 CFLKADEFIE 10
F+ DEFIE
Sbjct: 374 VFISVDEFIE 383


>sp|LIVG_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 2 FLKADE 7
FLKADE
Sbjct: 56 FLKADE 61


>sp|LYSJ_PYRAE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 3 LKADEFIE 10
+KAD+FI+
Sbjct: 329 VKADQFIQ 336


>sp|KAE1B_METTH|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 LKADEFIE 10
LKA E+IE
Sbjct: 182 LKASEYIE 189


>sp|Y1673_METJA|UNCHARACTERIZED protein MJ1673|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LKADEFI 9
LK DEFI
Sbjct: 24 LKVDEFI 30




127|SequenceR|640|631|SSKDECFLKA

>sp|GLMS_METMP|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanococcus maripaludis (strain

Query: 3 KDECFL 8
KDECF+
Sbjct: 190 KDECFI 195


>sp|SPCS_METJA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 SKDECFLK 9
+KDE FLK
Sbjct: 290 TKDESFLK 297


>sp|YR18_THEPE|UNCHARACTERIZED 18.7 kDa protein in|Thermofilum pendens

Query: 5 ECFLKA 10
+CFLKA
Sbjct: 13 DCFLKA 18


>sp|Y1428_METJA|TPR repeat-containing protein MJ1428|Methanocaldococcus jannaschii

Query: 5 ECFLKA 10
EC+LKA
Sbjct: 35 ECYLKA 40




128|SequenceR|645|636|IFVLHSSKDE

>sp|TCPO_METOL|PROBABLE 2' cyclic ADP-D-ribose synthase|Methanobrevibacter olleyae

Query: 1 IFVLHSSKDE 10
IFV HSS+D+
Sbjct: 208 IFVSHSSEDK 217


>sp|G1PDH_NITMS|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Nitrosopumilus maritimus (strain SCM1)

Query: 2 FVLHSSKD 9
FV H+SKD
Sbjct: 69 FVWHTSKD 76


>sp|SIHH_METJA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IFVLHSSKDE 10
IF+LH+ + E
Sbjct: 128 IFLLHTKRTE 137


>sp|AROK_THEKO|SHIKIMATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 VLHSSKDE 10
VLHSSK E
Sbjct: 155 VLHSSKVE 162


>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IFVLHSSKDE 10
+F++H +DE
Sbjct: 227 LFIIHFVRDE 236


>sp|Y887_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 IFVLHSSKDE 10
+FVLH K E
Sbjct: 252 VFVLHHGKLE 261


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 FVLHSSK 8
F++HSSK
Sbjct: 793 FIVHSSK 799


>sp|UVRC_METST|UVRABC system protein C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IFVLHSSKDE 10
++++H+ +DE
Sbjct: 15 VYIMHNKEDE 24




129|SequenceR|650|641|EERTNIFVLH

>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EERTNIFVLH 10
EERT + LH
Sbjct: 298 EERTRLLALH 307


>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 1 EERTNIFVLH 10
EERT + LH
Sbjct: 294 EERTRLLALH 303


>sp|ATGT_SULTO|TRNA-GUANINE(15) transglycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EERTNIFVLH 10
EERT + LH
Sbjct: 294 EERTKLLALH 303


>sp|CETZ4_HALVD|TUBULIN-LIKE protein CetZ4|Haloferax volcanii (strain ATCC 29605

Query: 1 EERTNIFVLH 10
++RTN ++H
Sbjct: 23 DQRTNCHIVH 32


>sp|TRMY_METJA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocaldococcus

Query: 1 EERTNIFVLH 10
EE NI+ LH
Sbjct: 128 EEGKNIYYLH 137


>sp|PELO_THEVO|PROTEIN pelota homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EERTNIFVLH 10
++ N+F++H
Sbjct: 140 DDEANVFIIH 149




130|SequenceR|655|646|KIWQQEERTN

>sp|Y412_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 KIWQQEERT 9
KIWQ+E++T
Sbjct: 192 KIWQKEKKT 200


>sp|LMRAC_THELN|LEUCINE/METHIONINE racemase|Thermococcus litoralis (strain ATCC 51850

Query: 1 KIWQQEER 8
K+W EER
Sbjct: 34 KVWDIEER 41


>sp|RIFK_HALSA|RIBOFLAVIN kinase|Halobacterium salinarum (strain ATCC 700922

Query: 3 WQQEERT 9
W+ E+RT
Sbjct: 165 WEDEDRT 171


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KIWQQEE 7
KIW++EE
Sbjct: 245 KIWEEEE 251


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 KIWQQEE 7
K+W QEE
Sbjct: 161 KMWSQEE 167


>sp|RIFK_NATPD|RIBOFLAVIN kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 WQQEERT 9
W+ +ERT
Sbjct: 163 WEDDERT 169


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 1 KIWQQEE 7
KIW +EE
Sbjct: 245 KIWSEEE 251




131|SequenceR|660|651|GVMQKKIWQQ

>sp|PRIS_PICTO|DNA primase small subunit PriS|Picrophilus torridus (strain ATCC

Query: 3 MQKKIWQ 9
M+KKIW+
Sbjct: 79 MEKKIWE 85


>sp|IF1A_HALMA|TRANSLATION initiation factor 1A|Haloarcula marismortui (strain ATCC 43049

Query: 1 GVMQKKIW 8
G MQK+IW
Sbjct: 47 GKMQKRIW 54


>sp|IF1A1_HALWD|TRANSLATION initiation factor 1A 1|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GVMQKKIW 8
G MQK+IW
Sbjct: 49 GRMQKRIW 56


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 GVMQKKIWQQ 10
G + KK+W Q
Sbjct: 156 GRLDKKMWSQ 165


>sp|Y1650_METJA|UNCHARACTERIZED protein MJ1650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GVMQKKIWQ 9
G ++KIWQ
Sbjct: 62 GSYKRKIWQ 70


>sp|CAS1A_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GVMQKKIWQQ 10
GV++ +W+Q
Sbjct: 196 GVLKYAVWRQ 205


>sp|IF1A_ARCFU|TRANSLATION initiation factor 1A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GVMQKKIW 8
G M+KKIW
Sbjct: 49 GKMRKKIW 56


>sp|IF1A_HALS3|TRANSLATION initiation factor 1A|Halobacterium salinarum (strain ATCC 29341

Query: 1 GVMQKKIW 8
G MQK+IW
Sbjct: 48 GRMQKRIW 55


>sp|IF1A1_HALSA|TRANSLATION initiation factor 1A 1|Halobacterium salinarum (strain ATCC

Query: 1 GVMQKKIW 8
G MQK+IW
Sbjct: 48 GRMQKRIW 55


>sp|SYC_IGNH4|CYSTEINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GVMQKKIWQQ 10
G+ KK+W Q
Sbjct: 155 GIKDKKMWSQ 164


>sp|GUAAB_METVS|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus vannielii

Query: 3 MQKKIWQ 9
+QK++WQ
Sbjct: 225 LQKELWQ 231




132|SequenceR|665|656|WHSERGVMQK

>sp|OTCC_THEVO|ORNITHINE carbamoyltransferase, catabolic|Thermoplasma volcanium (strain ATCC

Query: 2 HSERGVMQK 10
HSE+GV+ K
Sbjct: 293 HSEKGVLYK 301


>sp|OTCC_THEAC|ORNITHINE carbamoyltransferase, catabolic|Thermoplasma acidophilum (strain

Query: 2 HSERGVMQK 10
HSE+GV+ K
Sbjct: 293 HSEKGVLYK 301


>sp|KPYK_AERPE|PYRUVATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 WHSERGV 7
W SERG+
Sbjct: 442 WSSERGI 448


>sp|Y1451_METJA|UNCHARACTERIZED protein MJ1451|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WHSERGVMQ 9
W ERG+++
Sbjct: 475 WQKERGMIR 483


>sp|RL4_METBU|LARGE ribosomal subunit protein uL4|Methanococcoides burtonii (strain

Query: 1 WHSERGVMQ 9
W S RGV Q
Sbjct: 62 WGSGRGVAQ 70


>sp|Y133_THEAC|PUTATIVE quercetin 2,3-dioxygenase Ta0133|Thermoplasma acidophilum (strain

Query: 1 WHSERGV 7
WH RG+
Sbjct: 16 WHPHRGI 22


>sp|RS15_IGNH4|SMALL ribosomal subunit protein uS15|Ignicoccus hospitalis (strain KIN4/I

Query: 2 HSERGVMQ 9
HS RG+M+
Sbjct: 108 HSARGLME 115


>sp|TRUB_METKA|PROBABLE tRNA pseudouridine synthase B|Methanopyrus kandleri (strain AV19 /

Query: 2 HSERGVM 8
H++RG+M
Sbjct: 308 HADRGIM 314




133|SequenceR|670|661|DTLGIWHSER

>sp|CETZ2_HALVD|TUBULIN-LIKE protein CetZ2|Haloferax volcanii (strain ATCC 29605

Query: 1 DTLGIWHSE 9
D G+WHS+
Sbjct: 346 DPKGMWHSD 354


>sp|DNLI_CENSY|DNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 DTLGIWHSER 10
D LGI +SER
Sbjct: 351 DCLGISYSER 360


>sp|PYRH_SULTO|URIDYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DTLGIWHS 8
D LGIW S
Sbjct: 65 DLLGIWAS 72


>sp|RL3_THESM|LARGE ribosomal subunit protein uL3|Thermococcus sibiricus (strain DSM

Query: 2 TLGIWHSER 10
T+G WH R
Sbjct: 250 TIGPWHPAR 258


>sp|PYRH_SACS2|URIDYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DTLGIWHS 8
D LGIW S
Sbjct: 66 DLLGIWAS 73


>sp|PYRH_SACI3|URIDYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 DTLGIWHS 8
D LGIW S
Sbjct: 65 DLLGIWAS 72


>sp|PYRH_SACI7|URIDYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 DTLGIWHS 8
D LGIW S
Sbjct: 65 DLLGIWAS 72


>sp|PYRH_SACI6|URIDYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DTLGIWHS 8
D LGIW S
Sbjct: 65 DLLGIWAS 72


>sp|PYRH_SACI4|URIDYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DTLGIWHS 8
D LGIW S
Sbjct: 65 DLLGIWAS 72


>sp|PYRH_SACI2|URIDYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 DTLGIWHS 8
D LGIW S
Sbjct: 65 DLLGIWAS 72


>sp|PYRH_SACI1|URIDYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 DTLGIWHS 8
D LGIW S
Sbjct: 65 DLLGIWAS 72


>sp|RL3_THEVO|LARGE ribosomal subunit protein uL3|Thermoplasma volcanium (strain ATCC

Query: 2 TLGIWHSE 9
TLG WH +
Sbjct: 228 TLGPWHPD 235


>sp|RL3_THEAC|LARGE ribosomal subunit protein uL3|Thermoplasma acidophilum (strain ATCC

Query: 2 TLGIWHSE 9
TLG WH +
Sbjct: 228 TLGPWHPD 235


>sp|KAE1B_METLZ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 5 IWHSER 10
IWH++R
Sbjct: 449 IWHNDR 454


>sp|TRPF_METTH|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DTLGIWHSER 10
D LG+ H ER
Sbjct: 33 DLLGLIHVER 42


>sp|RL3_PICTO|LARGE ribosomal subunit protein uL3|Picrophilus torridus (strain ATCC

Query: 2 TLGIWHSE 9
TLG WH +
Sbjct: 226 TLGPWHPD 233


>sp|AMYA_PYRFU|ALPHA-AMYLASE furiosus (strain ATCC 43587

Query: 1 DTLGIWHSER 10
D G+W +ER
Sbjct: 116 DARGVWLTER 125


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 1 DTLGIWHSER 10
D G+W +ER
Sbjct: 115 DAKGVWLTER 124


>sp|STOPP_PYRHO|MEMBRANE-BOUND protease PH1510|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TLGIW 6
TLGIW
Sbjct: 245 TLGIW 249


>sp|TYW31_PYRHO|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 3 LGIWHSE 9
LG WH E
Sbjct: 71 LGKWHRE 77


>sp|TYW31_PYRFU|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 3 LGIWHSE 9
LG WH E
Sbjct: 71 LGKWHRE 77


>sp|Y1398_METMP|UNCHARACTERIZED metallohydrolase MMP1398|Methanococcus maripaludis (strain DSM

Query: 3 LGIWHSE 9
LG+W+S+
Sbjct: 97 LGLWNSD 103


>sp|RS8E_METKA|SMALL ribosomal subunit protein eS8|Methanopyrus kandleri (strain

Query: 3 LGIWH 7
+G+WH
Sbjct: 1 MGVWH 5


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 1 DTLGIWHSER 10
D G+W +ER
Sbjct: 115 DAKGLWLTER 124


>sp|MALE_THELN|TREHALOSE/MALTOSE-BINDING protein MalE|Thermococcus litoralis (strain ATCC 51850

Query: 2 TLGIWH 7
TLG WH
Sbjct: 331 TLGGWH 336




134|SequenceR|675|666|NERESDTLGI

>sp|AGLUS_METJA|ARCHAEAL glutamate synthase [NADPH]|Methanocaldococcus jannaschii (strain

Query: 1 NERESDTLGI 10
NE+E + LGI
Sbjct: 496 NEKELEVLGI 505


>sp|SYC_METMA|CYSTEINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ERESDTLGI 10
+R SDTLGI
Sbjct: 404 KRFSDTLGI 412


>sp|G1PDH_METVS|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus vannielii (strain ATCC 35089

Query: 1 NERESDTLGI 10
NE+ SD+ GI
Sbjct: 166 NEKYSDSSGI 175


>sp|GLPK_THEON|GLYCEROL kinase|Thermococcus onnurineus (strain NA1)

Query: 2 ERESDTLGI 10
+RES+ LG+
Sbjct: 21 DRESNVLGV 29




135|SequenceR|680|671|LWKWENERES

>sp|HIS8_METPE|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 WENER 8
WENER
Sbjct: 339 WENER 343


>sp|HIS8_METLZ|HISTIDINOL-PHOSPHATE aminotransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 WENER 8
WENER
Sbjct: 339 WENER 343


>sp|SAHH_SACS2|ADENOSYLHOMOCYSTEINASE solfataricus (strain ATCC 35092

Query: 2 WKWENERE 9
WK ENE E
Sbjct: 98 WKGENETE 105


>sp|PURP_METTH|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothermobacter thermautotrophicus

Query: 3 KWENERE 9
+WE+ER+
Sbjct: 122 RWESERD 128


>sp|PURP_METKA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanopyrus kandleri (strain AV19 /

Query: 1 LWKWENER 8
L +WE+ER
Sbjct: 118 LLRWESER 125


>sp|GLMS_METKA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanopyrus kandleri (strain AV19 /

Query: 4 WENERE 9
WE ERE
Sbjct: 454 WERERE 459


>sp|PDXS_HYPBU|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Hyperthermus butylicus (strain

Query: 1 LWKWE 5
+WKWE
Sbjct: 151 IWKWE 155


>sp|G1PDH_THEKO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus kodakarensis (strain ATCC

Query: 3 KWENERES 10
KWE RE+
Sbjct: 286 KWERVRET 293


>sp|GNTDO_HALSB|GENTISATE 1,2-dioxygenase|Haloferax sp

Query: 1 LWKWENERES 10
+WKWE+ + S
Sbjct: 46 IWKWEDIQAS 55


>sp|Y066_METJA|UNCHARACTERIZED protein MJ0066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LWKWENERE 9
LW+W+++R+
Sbjct: 472 LWRWKHKRQ 480




136|SequenceR|685|676|PSTGDLWKWE

>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 PSTGDLWKW 9
PS+G L KW
Sbjct: 152 PSSGSLVKW 160


>sp|AMPPA_METVS|AMP phosphorylase|Methanococcus vannielii (strain ATCC 35089

Query: 3 TGDLWKWE 10
TGD+ WE
Sbjct: 151 TGDMISWE 158


>sp|AMPPA_METMP|AMP phosphorylase|Methanococcus maripaludis (strain DSM 14266

Query: 3 TGDLWKWE 10
TGD+ WE
Sbjct: 151 TGDMISWE 158


>sp|AMPPA_METM7|AMP phosphorylase|Methanococcus maripaludis (strain C7 /

Query: 3 TGDLWKWE 10
TGD+ WE
Sbjct: 151 TGDMISWE 158


>sp|AMPPA_METM6|AMP phosphorylase|Methanococcus maripaludis (strain C6 /

Query: 3 TGDLWKWE 10
TGD+ WE
Sbjct: 151 TGDMISWE 158


>sp|GNTDO_HALSB|GENTISATE 1,2-dioxygenase|Haloferax sp

Query: 4 GDLWKWE 10
D+WKWE
Sbjct: 44 ADIWKWE 50


>sp|GATB_AERPE|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Aeropyrum pernix (strain ATCC 700893

Query: 5 DLWKWE 10
D W+WE
Sbjct: 120 DSWRWE 125


>sp|PDXS_HYPBU|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Hyperthermus butylicus (strain

Query: 6 LWKWE 10
+WKWE
Sbjct: 151 IWKWE 155


>sp|AMPPA_METM5|AMP phosphorylase|Methanococcus maripaludis (strain C5 /

Query: 3 TGDLWKWE 10
TGD+ WE
Sbjct: 151 TGDMIAWE 158


>sp|NTPTH_METS5|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Metallosphaera sedula (strain ATCC 51363

Query: 4 GDLWK 8
GDLWK
Sbjct: 118 GDLWK 122


>sp|TOP6A_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 4 GDLWKWE 10
GD WK E
Sbjct: 308 GDFWKTE 314


>sp|LYSY_NATPD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 STGDLW 7
S GDLW
Sbjct: 247 SKGDLW 252


>sp|LYSY_HALMA|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 STGDLW 7
S GDLW
Sbjct: 246 SKGDLW 251


>sp|GLCV_SACS2|GLUCOSE import ATP-binding protein GlcV|Saccharolobus solfataricus

Query: 1 PSTGDLW 7
PSTG+L+
Sbjct: 57 PSTGELY 63


>sp|AMPPA_META3|AMP phosphorylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 TGDLWKWE 10
TGD +WE
Sbjct: 150 TGDTIQWE 157


>sp|ACDE2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Archaeoglobus

Query: 2 STGDLWKWE 10
S G+LWK E
Sbjct: 153 SFGNLWKKE 161


>sp|Y415_METJA|UNCHARACTERIZED protein MJ0415|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 STGDLW 7
S GDLW
Sbjct: 148 SLGDLW 153


>sp|AGOG_PYRHO|N-GLYCOSYLASE/DNA lyase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GDLWKWE 10
G++W WE
Sbjct: 58 GEMWWWE 64


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GDLWKWE 10
G+ WKW+
Sbjct: 323 GEYWKWD 329


>sp|LIPA_NATPD|LIPOYL synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PSTGDLWK 8
P T D+WK
Sbjct: 253 PDTFDVWK 260


>sp|Y878_METJA|UNCHARACTERIZED lipoprotein MJ0878|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PSTGDLWKWE 10
P GD WK++
Sbjct: 70 PYNGDKWKYK 79


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 3 TGDLWKWE 10
TG+LW E
Sbjct: 276 TGELWNRE 283


>sp|CAPPA_PYRAE|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PSTGDLWKWE 10
P+T + WK+E
Sbjct: 389 PATVEEWKFE 398


>sp|PTH_METMA|PEPTIDYL-TRNA hydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 STGDLWKWE 10
S GDL KW+
Sbjct: 37 SKGDLEKWK 45


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 6 LWKW 9
LWKW
Sbjct: 712 LWKW 715


>sp|KAD_NATPD|ADENYLATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PSTGDLWKWE 10
P TGD++ E
Sbjct: 125 PETGDIYHTE 134




137|SequenceR|690|681|WNKYDPSTGD

>sp|NPD_METKA|NAD-DEPENDENT protein deacylase|Methanopyrus kandleri (strain AV19 /

Query: 1 WNKYDP 6
WNKYDP
Sbjct: 40 WNKYDP 45


>sp|MSRA_METBU|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcoides burtonii

Query: 1 WNKYDPSTGD 10
WN +DP+T D
Sbjct: 74 WNTHDPTTKD 83


>sp|NPD2_ARCFU|NAD-DEPENDENT protein deacylase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WNKYDP 6
W KYDP
Sbjct: 42 WRKYDP 47


>sp|RL5_METMP|LARGE ribosomal subunit protein uL5|Methanococcus maripaludis (strain DSM

Query: 3 KYDPSTG 9
KYDPS G
Sbjct: 122 KYDPSVG 128


>sp|MSRA_METM6|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 1 WNKYDPST 8
WN +DP+T
Sbjct: 77 WNNHDPTT 84


>sp|RL5_METM5|LARGE ribosomal subunit protein uL5|Methanococcus maripaludis (strain C5

Query: 3 KYDPSTG 9
KYDPS G
Sbjct: 122 KYDPSVG 128


>sp|MSRA_METM5|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 1 WNKYDPST 8
WN +DP+T
Sbjct: 77 WNNHDPTT 84


>sp|NPD_PYRAB|NAD-DEPENDENT protein deacylase|Pyrococcus abyssi (strain GE5 /

Query: 1 WNKYDP 6
WNKY P
Sbjct: 39 WNKYRP 44


>sp|RL5_METM7|LARGE ribosomal subunit protein uL5|Methanococcus maripaludis (strain C7

Query: 3 KYDPSTG 9
KYDPS G
Sbjct: 122 KYDPSIG 128


>sp|RL5_META3|LARGE ribosomal subunit protein uL5|Methanococcus aeolicus (strain ATCC

Query: 3 KYDPSTG 9
KYDPS G
Sbjct: 122 KYDPSVG 128


>sp|RL5_METM6|LARGE ribosomal subunit protein uL5|Methanococcus maripaludis (strain C6

Query: 3 KYDPSTG 9
KYDPS G
Sbjct: 122 KYDPSIG 128


>sp|GADH_PICTO|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Picrophilus torridus (strain ATCC 700027

Query: 2 NKYDPSTGD 10
KY+PSTG+
Sbjct: 19 KKYNPSTGE 27


>sp|DNLI_PYRHO|DNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 YDPSTGD 10
YDP TG+
Sbjct: 454 YDPETGE 460


>sp|DNLI_PYRFU|DNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 YDPSTGD 10
YDP TG+
Sbjct: 454 YDPETGE 460


>sp|DNLI_PYRAY|DNA ligase|Pyrococcus abyssi

Query: 4 YDPSTGD 10
YDP TG+
Sbjct: 454 YDPETGE 460


>sp|DNLI_PYRAB|DNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 YDPSTGD 10
YDP TG+
Sbjct: 454 YDPETGE 460


>sp|RL5_METVS|LARGE ribosomal subunit protein uL5|Methanococcus vannielii (strain ATCC

Query: 3 KYDPSTG 9
KYDP+ G
Sbjct: 122 KYDPTVG 128


>sp|RL5_METVA|LARGE ribosomal subunit protein uL5|Methanococcus vannielii

Query: 3 KYDPSTG 9
KYDP+ G
Sbjct: 122 KYDPTVG 128


>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 4 YDPSTGD 10
YDP TG+
Sbjct: 318 YDPDTGE 324


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 4 YDPSTGD 10
YDP TG+
Sbjct: 319 YDPDTGE 325


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 WNKYDPSTGD 10
WN+ + S GD
Sbjct: 450 WNELEVSAGD 459


>sp|RRP4_ARCFU|EXOSOME complex component Rrp4|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KYDPSTGD 10
+Y PS GD
Sbjct: 52 RYTPSVGD 59


>sp|GYAR_AERPE|GLYOXYLATE reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 WNKYDP 6
W+KY P
Sbjct: 29 WDKYQP 34


>sp|Y961_METJA|MCM-LIKE protein MJ0961|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YDPSTG 9
YDP TG
Sbjct: 677 YDPETG 682


>sp|Y1489_METJA|MCM-LIKE protein MJ1489|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YDPSTG 9
YDP TG
Sbjct: 599 YDPETG 604


>sp|SECY_PYRFU|PROTEIN translocase subunit SecY|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KYDPSTG 9
++DP+TG
Sbjct: 316 RFDPTTG 322


>sp|DNLI_THEAC|DNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 YDPSTGD 10
YDP TG+
Sbjct: 304 YDPDTGE 310


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 4 YDPSTG 9
YDPS+G
Sbjct: 150 YDPSSG 155


>sp|NPD_CALMQ|NAD-DEPENDENT protein deacetylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 WNKYDPS 7
W ++DP+
Sbjct: 47 WRRFDPA 53


>sp|RS8E_NANEQ|SMALL ribosomal subunit protein eS8|Nanoarchaeum equitans (strain

Query: 2 NKYDPSTG 9
N YDP+ G
Sbjct: 64 NVYDPTQG 71


>sp|NPD1_ARCFU|NAD-DEPENDENT protein deacylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WNKYDP 6
WN+Y P
Sbjct: 39 WNRYRP 44


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 5 DPSTGD 10
DP TGD
Sbjct: 656 DPETGD 661


>sp|CIMA_METKA|PUTATIVE (R)-citramalate synthase CimA|Methanopyrus kandleri (strain AV19 /

Query: 5 DPSTGD 10
DP TGD
Sbjct: 472 DPETGD 477


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 DPSTGD 10
DP TGD
Sbjct: 306 DPDTGD 311


>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 5 DPSTGD 10
DP TGD
Sbjct: 306 DPDTGD 311


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 DPSTGD 10
DP TGD
Sbjct: 306 DPDTGD 311


>sp|OFOA2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 1 WNKYDPSTG 9
W + PSTG
Sbjct: 354 WMRAGPSTG 362


>sp|DTDA_HALWD|D-AMINOACYL-TRNA deacylase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 KYDPSTGD 10
+YDP+T D
Sbjct: 303 EYDPATSD 310


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 WNKYDPST 8
W KY+P T
Sbjct: 269 WRKYNPGT 276


>sp|RS7_ARCFU|SMALL ribosomal subunit protein uS7|Archaeoglobus fulgidus (strain ATCC

Query: 1 WNKYDPS 7
+ KYDPS
Sbjct: 13 FGKYDPS 19


>sp|EF1A_METKA|ELONGATION factor 1-alpha|Methanopyrus kandleri (strain AV19 /

Query: 3 KYDPSTGD 10
K DP+TG+
Sbjct: 356 KIDPATGE 363


>sp|NPD_SULTO|NAD-DEPENDENT protein deacetylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WNKYDP 6
W KY P
Sbjct: 40 WKKYSP 45


>sp|NPD_SULAC|NAD-DEPENDENT protein deacetylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 WNKYDP 6
W KY P
Sbjct: 44 WKKYSP 49


>sp|NPD_SACS2|NAD-DEPENDENT protein deacetylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WNKYDP 6
W KY P
Sbjct: 40 WKKYSP 45


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WNKYDPSTGD 10
W KY TG+
Sbjct: 353 WKKYYEKTGN 362


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 1 WNKYDPSTG 9
W +YD + G
Sbjct: 366 WQRYDGTAG 374


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 1 WNKYDPSTG 9
W +YD + G
Sbjct: 366 WQRYDGTAG 374


>sp|DHYS_SULAC|PROBABLE deoxyhypusine synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 WNKYDPS 7
WNK PS
Sbjct: 282 WNKVRPS 288


>sp|Y1215_PYRHO|PROBABLE ABC transporter permease protein|Pyrococcus horikoshii (strain ATCC

Query: 4 YDPSTG 9
YDPS+G
Sbjct: 126 YDPSSG 131


>sp|LEUC_HALMA|3-ISOPROPYLMALATE dehydratase large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 5 DPSTGD 10
DP+TGD
Sbjct: 100 DPTTGD 105


>sp|XACC_HALVD|PENTONOLACTONASE XacC|Haloferax volcanii (strain ATCC 29605

Query: 2 NKYDPSTG 9
++YDP TG
Sbjct: 37 HRYDPETG 44


>sp|MSRA_METMJ|PEPTIDE methionine sulfoxide reductase MsrA|Methanoculleus marisnigri

Query: 1 WNKYDPST 8
W+ +DP+T
Sbjct: 80 WDAHDPTT 87


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 WNKYDPSTGD 10
W YD TG+
Sbjct: 663 WMVYDARTGE 672


>sp|PTH_SACI7|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 NKYDPSTGD 10
N DP TGD
Sbjct: 108 NLIDPITGD 116


>sp|PTH_SACI6|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 NKYDPSTGD 10
N DP TGD
Sbjct: 108 NLIDPITGD 116


>sp|PTH_SACI4|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 NKYDPSTGD 10
N DP TGD
Sbjct: 108 NLIDPITGD 116


>sp|PTH_SACI3|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 NKYDPSTGD 10
N DP TGD
Sbjct: 108 NLIDPITGD 116


>sp|PTH_SACI2|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 NKYDPSTGD 10
N DP TGD
Sbjct: 108 NLIDPITGD 116


>sp|PTH_SACI1|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 NKYDPSTGD 10
N DP TGD
Sbjct: 108 NLIDPITGD 116


>sp|Y599_METJA|UNCHARACTERIZED protein MJ0599|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NKYDPSTGD 10
NKYD GD
Sbjct: 55 NKYDVECGD 63


>sp|EF1A_HALMA|ELONGATION factor 1-alpha|Haloarcula marismortui (strain ATCC 43049

Query: 3 KYDPSTGD 10
K DPS+G+
Sbjct: 355 KIDPSSGE 362


>sp|URE1_HALMA|UREASE subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 4 YDPSTGD 10
Y P+TGD
Sbjct: 14 YGPTTGD 20


>sp|Y1266_METJA|UNCHARACTERIZED protein MJ1266|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YDPSTGD 10
YDP+ GD
Sbjct: 214 YDPNIGD 220


>sp|NPD_AERPE|NAD-DEPENDENT protein deacylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 WNKYDP 6
W+++DP
Sbjct: 41 WSRFDP 46


>sp|MSRA_METMP|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 1 WNKYDPST 8
WN ++P+T
Sbjct: 77 WNNHNPTT 84


>sp|Y686_METJA|UNCHARACTERIZED protein MJ0686|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WNKYDPS 7
WN Y P+
Sbjct: 341 WNPYTPT 347


>sp|EF1A_NATPD|ELONGATION factor 1-alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 3 KYDPSTGD 10
K DPS+G+
Sbjct: 356 KIDPSSGE 363


>sp|Y417_ARCFU|UNCHARACTERIZED protein AF_0417|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 DPSTGD 10
DP TGD
Sbjct: 65 DPETGD 70


>sp|RNP2_PYRAB|RIBONUCLEASE P protein component 2|Pyrococcus abyssi (strain GE5 /

Query: 3 KYDPST 8
KYDP T
Sbjct: 58 KYDPKT 63




138|SequenceR|695|686|PQGAKWNKYD

>sp|ILVC_METJA|KETOL-ACID reductoisomerase (NADP(+))|Methanocaldococcus jannaschii (strain

Query: 1 PQGAKWNK 8
P GA WNK
Sbjct: 49 PNGASWNK 56


>sp|RNZ_NITMS|RIBONUCLEASE Z|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PQGAKWNK 8
P+G WNK
Sbjct: 166 PEGELWNK 173


>sp|NPD_METKA|NAD-DEPENDENT protein deacylase|Methanopyrus kandleri (strain AV19 /

Query: 6 WNKYD 10
WNKYD
Sbjct: 40 WNKYD 44


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 KWNKY 9
KWNKY
Sbjct: 927 KWNKY 931


>sp|ARAT1_THELN|AROMATIC-AMINO-ACID aminotransferase 1|Thermococcus litoralis (strain ATCC 51850

Query: 1 PQGAKWNK 8
P G KW K
Sbjct: 334 PDGVKWTK 341


>sp|PELO_SACS2|PROTEIN pelota homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 KWNKY 9
+WNKY
Sbjct: 109 QWNKY 113


>sp|PELO_SACI7|PROTEIN pelota homolog|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 5 KWNKY 9
+WNKY
Sbjct: 109 QWNKY 113


>sp|PELO_SACI2|PROTEIN pelota homolog|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 KWNKY 9
+WNKY
Sbjct: 109 QWNKY 113


>sp|PELO_SACI1|PROTEIN pelota homolog|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 5 KWNKY 9
+WNKY
Sbjct: 109 QWNKY 113


>sp|KCY_METMA|CYTIDYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 KWNKY 9
KWN+Y
Sbjct: 159 KWNQY 163


>sp|KCY_METBF|CYTIDYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 5 KWNKY 9
KWN+Y
Sbjct: 159 KWNQY 163


>sp|KCY_METAC|CYTIDYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 KWNKY 9
KWN+Y
Sbjct: 159 KWNQY 163


>sp|CAS1_THEPD|CRISPR-ASSOCIATED endonuclease Cas1|Thermofilum pendens (strain DSM 2475

Query: 1 PQGAKWNKY 9
P G K+N Y
Sbjct: 77 PVGTKYNNY 85


>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 1 PQGAKW 6
P+G KW
Sbjct: 200 PEGLKW 205


>sp|FDHB_METJA|F420-DEPENDENT formate dehydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 1 PQGAKWNKY 9
P KW KY
Sbjct: 268 PSLEKWKKY 276


>sp|AROC_SULTO|CHORISMATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 KWNKY 9
+WNKY
Sbjct: 375 RWNKY 379


>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 4 AKWNKYD 10
AK+N+YD
Sbjct: 56 AKYNQYD 62




139|SequenceR|700|691|HGWNDPQGAK

>sp|IF2P_METBU|PROBABLE translation initiation factor IF-2|Methanococcoides burtonii

Query: 1 HGWNDPQGA 9
HGWN +GA
Sbjct: 138 HGWNPQKGA 146


>sp|DTDA_HALWD|D-AMINOACYL-TRNA deacylase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 WNDPQGA 9
WNDP GA
Sbjct: 156 WNDPDGA 162


>sp|KTHY1_SULTO|PROBABLE thymidylate kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GWNDP 6
GWNDP
Sbjct: 52 GWNDP 56


>sp|KTHY1_SACS2|PROBABLE thymidylate kinase 1|Saccharolobus solfataricus (strain ATCC

Query: 2 GWNDP 6
GWNDP
Sbjct: 53 GWNDP 57


>sp|KAE1B_HALWD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 GWNDPQGAK 10
GWN P G K
Sbjct: 172 GWNHPGGPK 180


>sp|HIS4_METHJ|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanospirillum hungatei JF-1

Query: 1 HGWNDPQG 8
HGW P G
Sbjct: 138 HGWERPAG 145


>sp|SYE_METAR|GLUTAMATE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 GWNDPQ 7
GW+DPQ
Sbjct: 360 GWDDPQ 365


>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 3 WNDPQGA 9
WNDP GA
Sbjct: 470 WNDPDGA 476


>sp|SYM_PYRHO|METHIONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GWNDPQGAK 10
G N+P+GAK
Sbjct: 562 GRNNPEGAK 570


>sp|SYE_KORCO|GLUTAMATE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GWNDPQ 7
GW+DP+
Sbjct: 355 GWDDPR 360


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GWNDPQ 7
GW+DP+
Sbjct: 348 GWDDPR 353


>sp|PDXS_METS5|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Metallosphaera sedula (strain

Query: 2 GWNDPQ 7
GW DP+
Sbjct: 298 GWEDPE 303


>sp|SYE_META3|GLUTAMATE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GWNDPQ 7
GW+DP+
Sbjct: 349 GWDDPR 354


>sp|GSA_HALLT|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 WNDPQGAK 10
+NDPQ AK
Sbjct: 178 FNDPQAAK 185


>sp|SYE_METTM|GLUTAMATE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 GWNDPQ 7
GW+DP+
Sbjct: 345 GWDDPR 350


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GWNDPQ 7
GW+DP+
Sbjct: 355 GWDDPR 360


>sp|SYE_METTH|GLUTAMATE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GWNDPQ 7
GW+DP+
Sbjct: 346 GWDDPR 351


>sp|SYE_PYRHO|GLUTAMATE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GWNDPQ 7
GW+DP+
Sbjct: 353 GWDDPR 358


>sp|SYE_PYRFU|GLUTAMATE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GWNDPQ 7
GW+DP+
Sbjct: 355 GWDDPR 360


>sp|DTDA_THEAC|D-AMINOACYL-TRNA deacylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 WNDPQG 8
WNDP+
Sbjct: 150 WNDPEA 155


>sp|SYE_THEKO|GLUTAMATE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GWNDPQ 7
GW+DP+
Sbjct: 355 GWDDPR 360


>sp|SYE_PYRAB|GLUTAMATE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 GWNDPQ 7
GW+DP+
Sbjct: 354 GWDDPR 359


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GWNDPQ 7
GW+DP+
Sbjct: 360 GWDDPR 365


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GWNDPQ 7
GW+DP+
Sbjct: 347 GWDDPR 352


>sp|SYE_THEON|GLUTAMATE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 GWNDPQ 7
GW+DP+
Sbjct: 354 GWDDPR 359


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GWNDPQ 7
GW+DP+
Sbjct: 360 GWDDPR 365


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GWNDPQ 7
GW+DP+
Sbjct: 360 GWDDPR 365


>sp|KTHY_SULAC|PROBABLE thymidylate kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GWNDP 6
GW DP
Sbjct: 54 GWKDP 58


>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GWNDPQ 7
GW+DP+
Sbjct: 360 GWDDPR 365


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 GWNDPQ 7
GW+DP+
Sbjct: 346 GWDDPR 351


>sp|SYE_HALWD|GLUTAMATE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GWNDPQG 8
GW+DP+
Sbjct: 369 GWDDPRA 375


>sp|DTDA_METPE|D-AMINOACYL-TRNA deacylase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 HGWNDP 6
H W+DP
Sbjct: 147 HEWSDP 152


>sp|SYE_HALMA|GLUTAMATE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GWNDPQG 8
GW+DP+
Sbjct: 364 GWDDPRA 370


>sp|MEND_HALLT|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 WNDPQ 7
WNDP+
Sbjct: 303 WNDPE 307


>sp|DTDA_METLZ|D-AMINOACYL-TRNA deacylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 WNDP 6
WNDP
Sbjct: 153 WNDP 156


>sp|KAE1B_NATPD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 GWNDPQGAK 10
GW+ P G K
Sbjct: 173 GWSHPGGPK 181


>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 3 WNDP 6
WNDP
Sbjct: 334 WNDP 337


>sp|KAE1B_HALMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 GWNDPQGAK 10
GW+ P G K
Sbjct: 182 GWSHPGGPK 190


>sp|KAE1B_HALSA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 GWNDPQGAK 10
GW P G K
Sbjct: 167 GWQHPGGPK 175


>sp|SYE_HALSA|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GWNDPQG 8
GW+DP+
Sbjct: 364 GWDDPRA 370


>sp|SYE_HALS3|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 GWNDPQG 8
GW+DP+
Sbjct: 364 GWDDPRA 370


>sp|HPCAS_SULTO|3-HYDROXYPROPIONYL-COENZYME A synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 WNDPQGAK 10
WNDP +
Sbjct: 484 WNDPDNER 491


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HGWNDP 6
+GWN P
Sbjct: 311 NGWNKP 316


>sp|CSD_HALSA|PROBABLE cysteine desulfurase|Halobacterium salinarum (strain ATCC 700922

Query: 3 WNDP 6
WNDP
Sbjct: 273 WNDP 276




140|SequenceR|705|696|GPGHGHGWND

>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 GHGWND 10
GHGW+D
Sbjct: 327 GHGWDD 332


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 5 GHGWND 10
GHGW+D
Sbjct: 327 GHGWDD 332


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 GHGWND 10
GHGW+D
Sbjct: 327 GHGWDD 332


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 GHGWND 10
GHGW+D
Sbjct: 327 GHGWDD 332


>sp|FPRA_METJA|COENZYME F420H(2) oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPGHGHGWND 10
P HG W D
Sbjct: 236 APSHGQIWTD 245


>sp|FPRA_METTM|COENZYME F420H(2) oxidase|Methanothermobacter marburgensis (strain ATCC

Query: 1 GPGHGHGWND 10
P HG W D
Sbjct: 230 APSHGQIWTD 239


>sp|HDRA_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanococcus

Query: 1 GPGHGH 6
GP HGH
Sbjct: 363 GPTHGH 368


>sp|RL4_ARCFU|LARGE ribosomal subunit protein uL4|Archaeoglobus fulgidus (strain ATCC

Query: 1 GPGHGHG 7
GPGHG+
Sbjct: 62 GPGHGYA 68


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 4 HGHGWND 10
HGHG+ D
Sbjct: 74 HGHGYVD 80


>sp|FPRA_METAZ|COENZYME F420H(2) oxidase|Methanobrevibacter arboriphilus

Query: 1 GPGHGHGWND 10
P HG W D
Sbjct: 234 APSHGQIWTD 243


>sp|AROA_METMA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 6 HGWND 10
HGW+D
Sbjct: 377 HGWDD 381


>sp|AROA_METAC|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 6 HGWND 10
HGW+D
Sbjct: 377 HGWDD 381


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 3 GHGHG 7
GHGHG
Sbjct: 362 GHGHG 366


>sp|DNLI2_KORCO|DNA ligase 2|Korarchaeum cryptofilum (strain OPF8)

Query: 2 PGHGHGWN 9
P H GWN
Sbjct: 532 PTHTCGWN 539


>sp|TRPF_ARCFU|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GPGHGHGWN 9
G G H WN
Sbjct: 128 GSGKTHDWN 136


>sp|RL4_METTP|LARGE ribosomal subunit protein uL4|Methanothrix thermoacetophila

Query: 1 GPGHG 5
GPGHG
Sbjct: 62 GPGHG 66


>sp|NADK_HALSA|NAD kinase|Halobacterium salinarum (strain ATCC 700922

Query: 3 GHGHG 7
GHGHG
Sbjct: 150 GHGHG 154


>sp|NADK_HALS3|NAD kinase|Halobacterium salinarum (strain ATCC 29341

Query: 3 GHGHG 7
GHGHG
Sbjct: 150 GHGHG 154


>sp|SYFA_THESM|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus sibiricus (strain DSM 12597

Query: 4 HGHGW 8
H HGW
Sbjct: 316 HEHGW 320


>sp|PIMT_PYRFU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GHGHGWN 9
G G GWN
Sbjct: 89 GTGSGWN 95


>sp|PIMT_PYRAB|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 GHGHGWN 9
G G GWN
Sbjct: 85 GTGSGWN 91


>sp|AROA_METBU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcoides burtonii (strain DSM

Query: 6 HGWND 10
HGW+D
Sbjct: 375 HGWHD 379


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 2 PGHGHGWND 10
PG+ + W+D
Sbjct: 455 PGYDYFWHD 463


>sp|CAS1_HALVD|CRISPR-ASSOCIATED endonuclease Cas1|Haloferax volcanii (strain ATCC 29605

Query: 2 PGHGHGWND 10
P H GW D
Sbjct: 63 PVHIFGWKD 71


>sp|EF1A_METTP|ELONGATION factor 1-alpha|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 PGHGHGWN 9
PG GWN
Sbjct: 285 PGDNIGWN 292


>sp|EF1A_METAC|ELONGATION factor 1-alpha|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PGHGHGWN 9
PG GWN
Sbjct: 283 PGDNIGWN 290


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 2 PGHGHGWN 9
PG GWN
Sbjct: 282 PGDNIGWN 289


>sp|PIMT_PYRHO|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GHGHGWN 9
G G GWN
Sbjct: 89 GTGSGWN 95


>sp|EF1A_METBF|ELONGATION factor 1-alpha|Methanosarcina barkeri (strain Fusaro /

Query: 2 PGHGHGWN 9
PG GWN
Sbjct: 283 PGDNIGWN 290


>sp|EF1A_METMA|ELONGATION factor 1-alpha|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PGHGHGWN 9
PG GWN
Sbjct: 283 PGDNIGWN 290


>sp|PIMT_THESM|PROTEIN-L-ISOASPARTATE O-methyltransferase|Thermococcus sibiricus (strain DSM 12597

Query: 3 GHGHGWN 9
G G GWN
Sbjct: 88 GAGSGWN 94


>sp|BTUCA_HALSA|COBALAMIN import system permease protein|Halobacterium salinarum (strain ATCC

Query: 1 GPGHGHGWND 10
G HG W+D
Sbjct: 222 GTLHGSRWHD 231


>sp|BTUCA_HALS3|COBALAMIN import system permease protein|Halobacterium salinarum (strain ATCC

Query: 1 GPGHGHGWND 10
G HG W+D
Sbjct: 222 GTLHGSRWHD 231


>sp|CBID_METB6|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 GPGHGH 6
GPG GH
Sbjct: 125 GPGIGH 130


>sp|FPRA_METTH|COENZYME F420H(2) oxidase|Methanothermobacter thermautotrophicus (strain

Query: 1 GPGHGHGWND 10
P HG W +
Sbjct: 230 APSHGQIWTE 239


>sp|PIMT_THEON|PROTEIN-L-ISOASPARTATE O-methyltransferase|Thermococcus onnurineus (strain NA1)

Query: 3 GHGHGWN 9
G G GWN
Sbjct: 88 GTGSGWN 94


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 PGHGHGWND 10
PG+G W D
Sbjct: 164 PGNGGYWKD 172


>sp|NASD_HALMT|ASSIMILATORY ferredoxin-dependent nitrite reductase|Haloferax mediterranei

Query: 2 PGHGHGWND 10
P G+GW D
Sbjct: 94 PEFGNGWVD 102




141|SequenceR|710|701|GACDEGPGHG

>sp|THIC_PYRFU|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 EGPGH 9
EGPGH
Sbjct: 265 EGPGH 269


>sp|THIC_PYRAB|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 5 EGPGH 9
EGPGH
Sbjct: 265 EGPGH 269


>sp|RS4_SULTO|SMALL ribosomal subunit protein uS4|Sulfurisphaera tokodaii (strain DSM

Query: 5 EGPGH 9
EGPGH
Sbjct: 12 EGPGH 16


>sp|THIC_SULTO|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 EGPGH 9
EGPGH
Sbjct: 264 EGPGH 268


>sp|THIC_PYRAE|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 EGPGH 9
EGPGH
Sbjct: 266 EGPGH 270


>sp|THIC_IGNH4|PHOSPHOMETHYLPYRIMIDINE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 EGPGH 9
EGPGH
Sbjct: 267 EGPGH 271


>sp|THIC_SULAC|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 EGPGH 9
EGPGH
Sbjct: 264 EGPGH 268


>sp|THIC_ARCFU|PHOSPHOMETHYLPYRIMIDINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 EGPGH 9
EGPGH
Sbjct: 261 EGPGH 265


>sp|Y405_HALVD|PROBABLE cell surface fusion protein|Haloferax volcanii (strain ATCC 29605

Query: 4 DEGPGH 9
DEGPGH
Sbjct: 651 DEGPGH 656


>sp|THIC_THEKO|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 EGPGH 9
EGPGH
Sbjct: 265 EGPGH 269


>sp|THIC1_METST|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 EGPGH 9
EGPGH
Sbjct: 264 EGPGH 268


>sp|THIC_THEGJ|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 5 EGPGH 9
EGPGH
Sbjct: 265 EGPGH 269


>sp|THIC_METVS|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 5 EGPGH 9
EGPGH
Sbjct: 264 EGPGH 268


>sp|THIC1_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 EGPGH 9
EGPGH
Sbjct: 264 EGPGH 268


>sp|GATE_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfurisphaera tokodaii (strain DSM

Query: 3 CDEGPGH 9
CDE P H
Sbjct: 84 CDEEPPH 90


>sp|THIC_SACI4|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 5 EGPGH 9
EGPGH
Sbjct: 264 EGPGH 268


>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 EGPGH 9
EGPGH
Sbjct: 264 EGPGH 268


>sp|THIC_METMP|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 5 EGPGH 9
EGPGH
Sbjct: 264 EGPGH 268


>sp|THIC_METM7|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C7 /

Query: 5 EGPGH 9
EGPGH
Sbjct: 264 EGPGH 268


>sp|THIC_METM6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C6 /

Query: 5 EGPGH 9
EGPGH
Sbjct: 264 EGPGH 268


>sp|THIC_SACI6|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 5 EGPGH 9
EGPGH
Sbjct: 264 EGPGH 268


>sp|THIC_SACI3|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 5 EGPGH 9
EGPGH
Sbjct: 264 EGPGH 268


>sp|THIC_SACI2|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 EGPGH 9
EGPGH
Sbjct: 264 EGPGH 268


>sp|THIC2_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 EGPGH 9
EGPGH
Sbjct: 264 EGPGH 268


>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 5 EGPGH 9
EGPGH
Sbjct: 264 EGPGH 268


>sp|DAPA_METTH|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GACDEGPG 8
G+C++ PG
Sbjct: 269 GSCEDAPG 276


>sp|THIC_METM5|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C5 /

Query: 5 EGPGH 9
EGPGH
Sbjct: 264 EGPGH 268


>sp|THIC2_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina barkeri (strain Fusaro /

Query: 5 EGPGH 9
EGPGH
Sbjct: 260 EGPGH 264


>sp|THIC_METPE|PHOSPHOMETHYLPYRIMIDINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 5 EGPGH 9
EGPGH
Sbjct: 264 EGPGH 268


>sp|THIC1_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 EGPGH 9
EGPGH
Sbjct: 260 EGPGH 264


>sp|IF2P_METB6|PROBABLE translation initiation factor IF-2|Methanoregula boonei (strain DSM

Query: 5 EGPGHG 10
EGPG G
Sbjct: 229 EGPGEG 234


>sp|THIC2_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 EGPGH 9
EGPGH
Sbjct: 264 EGPGH 268


>sp|THIC2_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 EGPGH 9
EGPGH
Sbjct: 264 EGPGH 268


>sp|THIC1_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina barkeri (strain Fusaro /

Query: 5 EGPGH 9
EGPGH
Sbjct: 264 EGPGH 268


>sp|PNCB_METBU|NICOTINATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 3 CDEGPGH 9
C EGP H
Sbjct: 107 CIEGPWH 113


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 ACDEGPGHG 10
CD+ PG G
Sbjct: 591 TCDDDPGKG 599


>sp|Y453_METAC|UNCHARACTERIZED glycosyltransferase MA_0453|Methanosarcina acetivorans (strain

Query: 3 CDEGPGH 9
C EG GH
Sbjct: 8 CGEGLGH 14


>sp|PMDHS_METTP|PHOSPHOMEVALONATE dehydratase small subunit|Methanothrix thermoacetophila (strain

Query: 1 GACDEGPG 8
G C EGP
Sbjct: 10 GGCAEGPA 17


>sp|Y1636_METMA|UNCHARACTERIZED glycosyltransferase MM_1636|Methanosarcina mazei (strain ATCC

Query: 3 CDEGPGH 9
C EG GH
Sbjct: 8 CGEGLGH 14


>sp|MTIP_METAC|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanosarcina acetivorans

Query: 2 ACDEGP 7
AC EGP
Sbjct: 155 ACTEGP 160


>sp|Y452_METAC|UNCHARACTERIZED glycosyltransferase MA_0452|Methanosarcina acetivorans (strain

Query: 3 CDEGPGH 9
C EG GH
Sbjct: 8 CGEGLGH 14


>sp|Y582_METMA|UNCHARACTERIZED glycosyltransferase MM_0582|Methanosarcina mazei (strain ATCC

Query: 3 CDEGPGH 9
C EG GH
Sbjct: 8 CGEGLGH 14




142|SequenceR|715|706|GAYILGACDE

>sp|HMGCS_SULTO|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 AYILGACDE 10
AYI+G DE
Sbjct: 160 AYIVGPADE 168


>sp|SIHH_METTH|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 ILGACDE 10
I+GAC+E
Sbjct: 143 IIGACEE 149


>sp|SIHH_METMA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AYILGACDE 10
A ILG C+E
Sbjct: 138 AKILGGCEE 146


>sp|PYRC_METKA|DIHYDROOROTASE kandleri (strain AV19 /

Query: 1 GAYILG 6
GAY+LG
Sbjct: 140 GAYVLG 145


>sp|ATGT_METS3|TRNA-GUANINE(15) transglycosylase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GAYILGACD 9
G +LGAC+
Sbjct: 633 GKALLGACE 641


>sp|FAEHP_METST|BIFUNCTIONAL enzyme Fae/Hps|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GAYILGACD 9
G YI+G+ D
Sbjct: 369 GRYIIGSSD 377


>sp|MAAL_HALMA|METHYLASPARTATE ammonia-lyase|Haloarcula marismortui (strain ATCC 43049

Query: 2 AYILGACDE 10
AY+ G C+E
Sbjct: 358 AYVGGTCNE 366




143|SequenceR|720|711|FDNWQGAYIL

>sp|FLPA_AERPE|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Aeropyrum pernix (strain ATCC

Query: 2 DNWQGAYIL 10
D W+G Y++
Sbjct: 11 DRWRGVYVV 19


>sp|TRUD1_METJA|PROBABLE tRNA pseudouridine synthase D|Methanocaldococcus jannaschii

Query: 2 DNWQGAYI 9
+NW+G YI
Sbjct: 49 ENWKGNYI 56


>sp|ENO1_METHJ|ENOLASE 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 NWQGA 7
NWQGA
Sbjct: 155 NWQGA 159


>sp|RS8_NITMS|SMALL ribosomal subunit protein uS8|Nitrosopumilus maritimus (strain

Query: 1 FDNWQGAYI 9
F+NW+ Y+
Sbjct: 86 FNNWEQQYL 94


>sp|RNP4_SACS2|RIBONUCLEASE P protein component 4|Saccharolobus solfataricus (strain ATCC

Query: 3 NWQGAYIL 10
NWQ Y+L
Sbjct: 87 NWQRRYVL 94


>sp|RNP4_SACI7|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain Y.G.57.14

Query: 3 NWQGAYIL 10
NWQ Y+L
Sbjct: 87 NWQRRYVL 94


>sp|RNP4_SACI6|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain M.16.4 /

Query: 3 NWQGAYIL 10
NWQ Y+L
Sbjct: 87 NWQRRYVL 94


>sp|RNP4_SACI4|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain M.14.25 /

Query: 3 NWQGAYIL 10
NWQ Y+L
Sbjct: 87 NWQRRYVL 94


>sp|RNP4_SACI3|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain M.16.27)

Query: 3 NWQGAYIL 10
NWQ Y+L
Sbjct: 87 NWQRRYVL 94


>sp|RNP4_SACI2|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 NWQGAYIL 10
NWQ Y+L
Sbjct: 87 NWQRRYVL 94


>sp|RNP4_SACI1|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain Y.N.15.51

Query: 3 NWQGAYIL 10
NWQ Y+L
Sbjct: 87 NWQRRYVL 94


>sp|FSX1_HALS0|FUSEXIN 1|Haloferax sp. (strain Q22)

Query: 1 FDNWQGAY 8
FD W G Y
Sbjct: 153 FDTWTGQY 160


>sp|LYSY_AERPE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 FDNWQG 6
FD W+G
Sbjct: 342 FDEWEG 347


>sp|NADB_SACS2|L-ASPARTATE oxidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DNWQGAYI 9
DNW+G I
Sbjct: 364 DNWEGLSI 371


>sp|GLYA_NITMS|SERINE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 FDNWQGAY 8
FDN GAY
Sbjct: 427 FDNKLGAY 434


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DNWQGAYIL 10
+NW+ Y++
Sbjct: 1440 ENWRDCYVI 1448


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FDNWQGAY 8
F+NW G Y
Sbjct: 41 FENWSGWY 48


>sp|FSX1_HALSH|FUSEXIN 1|Haloplanus natans (strain DSM 17983

Query: 1 FDNWQGAY 8
+D W G+Y
Sbjct: 154 YDYWTGSY 161




144|SequenceR|725|716|VDECQFDNWQ

>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 1 VDECQFDNWQ 10
VD+ +FD W+
Sbjct: 264 VDKLKFDGWE 273


>sp|SEPS_METTP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 CQFDNWQ 10
C+FD W+
Sbjct: 401 CEFDAWE 407


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VDECQFDNWQ 10
VD C+ D W+
Sbjct: 200 VDLCKADEWR 209


>sp|SEPS_METAR|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocella arvoryzae (strain DSM 22066

Query: 4 CQFDNWQ 10
C+FD W+
Sbjct: 400 CRFDVWE 406


>sp|Y749_METJA|UNCHARACTERIZED protein MJ0749|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 QFDNW 9
+FDNW
Sbjct: 9 KFDNW 13


>sp|RBL_METBF|RIBULOSE bisphosphate carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 DECQFDN 8
DEC DN
Sbjct: 323 DECVLDN 329


>sp|Y578_METJA|UNCHARACTERIZED protein MJ0578|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDECQFD 7
+D CQFD
Sbjct: 83 LDVCQFD 89


>sp|SEPS_METBF|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 CQFDNWQ 10
C+F +W+
Sbjct: 402 CEFPSWE 408




145|SequenceR|730|721|CIFNNVDECQ

>sp|Y535_METJA|UNCHARACTERIZED protein MJ0535|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CIFNNV 6
CIFNN+
Sbjct: 140 CIFNNI 145


>sp|Y1194_METTH|PROBABLE deacetylase MTH_1194|Methanothermobacter thermautotrophicus (strain

Query: 1 CIFNNV 6
CIFNN+
Sbjct: 128 CIFNNI 133


>sp|Y1365_METJA|UNCHARACTERIZED protein MJ1365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IFNNVDEC 9
+FN V+EC
Sbjct: 10 VFNGVNEC 17


>sp|ILVD_METTH|DIHYDROXY-ACID dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 IFNNVDEC 9
+FN+ DEC
Sbjct: 404 VFNSEDEC 411


>sp|RPIA_METMA|RIBOSE-5-PHOSPHATE isomerase A|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IFNNVDE 8
IF+NVDE
Sbjct: 211 IFSNVDE 217


>sp|Y103_METJA|UNCHARACTERIZED protein MJ0103|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CIFNNVDE 8
CIF +VDE
Sbjct: 122 CIFCSVDE 129


>sp|DPCKG_PYRAR|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 IFNNVDECQ 10
+FN +++CQ
Sbjct: 161 LFNYLEQCQ 169


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 4 NNVDEC 9
NNVD C
Sbjct: 124 NNVDHC 129


>sp|MTTB_METBF|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri (strain Fusaro /

Query: 3 FNNVDEC 9
FN V EC
Sbjct: 94 FNTVQEC 100


>sp|MTTB_METBA|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri

Query: 3 FNNVDEC 9
FN V EC
Sbjct: 94 FNTVQEC 100


>sp|MTTB1_METAC|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina acetivorans (strain ATCC

Query: 3 FNNVDEC 9
FN V EC
Sbjct: 94 FNTVQEC 100


>sp|RAD50_METMA|DNA double-strand break repair Rad50|Methanosarcina mazei (strain ATCC

Query: 2 IFNNVDECQ 10
++NN DE +
Sbjct: 901 VYNNADELE 909


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 4 NNVDEC 9
NNVD C
Sbjct: 123 NNVDHC 128




146|SequenceR|735|726|ERDKECIFNN

>sp|NADK_THEAC|NAD kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RDKECIF 8
RD+ECI
Sbjct: 218 RDQECIL 224


>sp|Y1183_METJA|UNCHARACTERIZED protein MJ1183|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RDKECIF 8
RDKEC F
Sbjct: 56 RDKECYF 62


>sp|FLPA_SULAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Sulfolobus acidocaldarius

Query: 5 ECIFNN 10
ECIFN+
Sbjct: 17 ECIFND 22


>sp|METK_METVS|S-ADENOSYLMETHIONINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 DKECIF 8
D+ECIF
Sbjct: 266 DEECIF 271


>sp|MTRH_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus vannielii (strain ATCC

Query: 4 KECIFNN 10
K+CI+N+
Sbjct: 123 KQCIYNS 129


>sp|MTRH_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanocaldococcus jannaschii (strain

Query: 4 KECIFNN 10
K+CI+N+
Sbjct: 123 KQCIYNS 129


>sp|PYRC_SACS2|DIHYDROOROTASE solfataricus (strain ATCC 35092

Query: 1 ERDKECI 7
+R+KEC+
Sbjct: 224 DREKECL 230


>sp|RS7_AERPE|SMALL ribosomal subunit protein uS7|Aeropyrum pernix (strain ATCC 700893

Query: 4 KECIFNN 10
++C FNN
Sbjct: 160 RQCAFNN 166




147|SequenceR|742|731|LASSLVTERDKE

>sp|RFCL_IGNH4|REPLICATION factor C large subunit|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LASSLVTERDK 11
LAS+L+ ERD+
Sbjct: 221 LASALLVERDR 231


>sp|PYRE_SULTO|OROTATE phosphoribosyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LASSLVTERDK 11
L SSL+++ DK
Sbjct: 173 LNSSLISDNDK 183


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 SLVTERDKE 12
SL+TER+K+
Sbjct: 164 SLLTEREKK 172




THE END