COL12_HUMAN Blast Output
Archaea
1|Sequence|1|10|MKDDFAEEEE

>sp|FDHD_SULTO|SULFUR carrier protein FdhD|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 MKDDFAEEEE 10
++DDF EEE
Sbjct: 18 VEDDFVAEEE 27


>sp|GRPE_HALMT|PROTEIN GrpE|Haloferax mediterranei (strain ATCC 33500

Query: 1 MKDDFAE 7
M DDFAE
Sbjct: 1 MSDDFAE 7


>sp|UBIX_PYRAB|FLAVIN prenyltransferase UbiX|Pyrococcus abyssi (strain GE5 /

Query: 1 MKDDFAEEE 9
+K DF+E+E
Sbjct: 50 VKPDFSEDE 58


>sp|RS3_METHJ|SMALL ribosomal subunit protein uS3|Methanospirillum hungatei JF-1

Query: 3 DDFAEEE 9
DDF EEE
Sbjct: 231 DDFMEEE 237


>sp|SYFA_METJA|PHENYLALANINE--TRNA ligase alpha subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 DDFAEEEE 10
DDF+EEE+
Sbjct: 143 DDFSEEEK 150




2|Sequence|6|15|AEEEEVQSFG

>sp|Y888_METJA|PROBABLE metallo-hydrolase MJ0888|Methanocaldococcus jannaschii (strain ATCC

Query: 3 EEEVQSFG 10
EEE++S+G
Sbjct: 114 EEELKSYG 121




3|Sequence|11|20|VQSFGYKRFG

>sp|SYE_NANEQ|GLUTAMATE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 QSFGYKRFG 10
QSF YK FG
Sbjct: 294 QSFIYKAFG 302


>sp|TRUD_PYRIL|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum islandicum (strain DSM

Query: 4 FGYKRFG 10
+GY+RFG
Sbjct: 172 YGYQRFG 178


>sp|PRIS_CENSY|DNA primase small subunit PriS|Cenarchaeum symbiosum (strain A)

Query: 2 QSFGYKRFG 10
+ FGY+RFG
Sbjct: 33 REFGYQRFG 41


>sp|KATG2_HALMA|CATALASE-PEROXIDASE 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 VQSFGYKRFG 10
++S G+K FG
Sbjct: 161 IESMGFKTFG 170


>sp|TRUD_PYRNV|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum neutrophilum (strain DSM

Query: 4 FGYKRFG 10
+GY+RFG
Sbjct: 172 YGYQRFG 178


>sp|TRUD_PYRAE|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum aerophilum (strain ATCC

Query: 4 FGYKRFG 10
+GY+RFG
Sbjct: 172 YGYQRFG 178


>sp|TRUD_THEGJ|PROBABLE tRNA pseudouridine synthase D|Thermococcus gammatolerans (strain

Query: 4 FGYKRFG 10
FGY+RFG
Sbjct: 163 FGYQRFG 169


>sp|TRUD_THEKO|PROBABLE tRNA pseudouridine synthase D|Thermococcus kodakarensis (strain

Query: 4 FGYKRFG 10
FGY+RFG
Sbjct: 163 FGYQRFG 169


>sp|TRUD_PYRAR|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum arsenaticum (strain DSM

Query: 4 FGYKRFG 10
+GY+RFG
Sbjct: 172 YGYQRFG 178


>sp|NUCS_SULTO|ENDONUCLEASE NucS|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VQSFGYKRFG 10
V FGY +FG
Sbjct: 159 VDLFGYDKFG 168


>sp|ARCSA_THEAC|ARCHAEOSINE synthase subunit alpha|Thermoplasma acidophilum (strain ATCC

Query: 4 FGYKRFG 10
FGY R+G
Sbjct: 8 FGYARYG 14


>sp|TRUD_THEON|PROBABLE tRNA pseudouridine synthase D|Thermococcus onnurineus (strain NA1)

Query: 4 FGYKRFG 10
FGY+RFG
Sbjct: 163 FGYQRFG 169


>sp|Y620_METKA|UPF0425 pyridoxal phosphate-dependent protein MK0620|Methanopyrus kandleri

Query: 2 QSFGYKRF 9
+ FGY RF
Sbjct: 330 ERFGYDRF 337


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VQSFGYKR 8
+++FGYKR
Sbjct: 1206 LKAFGYKR 1213


>sp|ACYP_SULAC|ACYLPHOSPHATASE acidocaldarius (strain ATCC 33909

Query: 1 VQSFGYKRF 9
VQ GY+RF
Sbjct: 15 VQGVGYRRF 23


>sp|TRUD_SULTO|PROBABLE tRNA pseudouridine synthase D|Sulfurisphaera tokodaii (strain DSM

Query: 5 GYKRFG 10
GY+RFG
Sbjct: 157 GYQRFG 162


>sp|SYH_PYRAE|HISTIDINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 QSFGYKR 8
+SFGY+R
Sbjct: 38 ESFGYRR 44


>sp|SYH_PYRNV|HISTIDINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 QSFGYKR 8
+SFGY+R
Sbjct: 38 ESFGYRR 44


>sp|SYH_PYRCJ|HISTIDINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 QSFGYKR 8
+SFGY+R
Sbjct: 38 ESFGYRR 44


>sp|TRUD_SACS2|PROBABLE tRNA pseudouridine synthase D|Saccharolobus solfataricus (strain

Query: 5 GYKRFG 10
GY+RFG
Sbjct: 166 GYQRFG 171




4|Sequence|16|25|YKRFGIQEGT

>sp|TOP6B_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YKRFGIQE 8
+KR+GI+E
Sbjct: 397 WKRYGIEE 404


>sp|Y300_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0300|Methanocaldococcus

Query: 2 KRFGIQEGT 10
KR GI +GT
Sbjct: 25 KRLGITQGT 33


>sp|PURP_META3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus aeolicus (strain ATCC

Query: 1 YKRFGIQE 8
YKRFG+ +
Sbjct: 55 YKRFGVAD 62


>sp|COFC_METMS|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 2 KRFGIQEG 9
KRFG +EG
Sbjct: 192 KRFGKKEG 199


>sp|PURP_METVS|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus vannielii (strain ATCC

Query: 1 YKRFGIQE 8
YKRFG+ +
Sbjct: 55 YKRFGVAD 62


>sp|PURP_METMP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain DSM

Query: 1 YKRFGIQE 8
YKRFG+ +
Sbjct: 55 YKRFGVAD 62


>sp|PURP_METM5|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C5

Query: 1 YKRFGIQE 8
YKRFG+ +
Sbjct: 55 YKRFGVAD 62


>sp|PURP_METM7|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C7

Query: 1 YKRFGIQE 8
YKRFG+ +
Sbjct: 55 YKRFGVAD 62


>sp|PURP_METM6|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C6

Query: 1 YKRFGIQE 8
YKRFG+ +
Sbjct: 55 YKRFGVAD 62


>sp|GLYA_METS5|SERINE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 3 RFGIQEG 9
RFG++EG
Sbjct: 369 RFGMKEG 375


>sp|PUR7_METBF|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 KRFGIQEGT 10
KR+ I+EGT
Sbjct: 102 KRYPIKEGT 110


>sp|CAPPA_THEPD|PHOSPHOENOLPYRUVATE carboxylase|Thermofilum pendens (strain DSM 2475

Query: 1 YKRFGIQ 7
YKR G+Q
Sbjct: 103 YKRLGVQ 109


>sp|KADA_PYRAE|ADENYLATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KRFGIQ 7
KRFGIQ
Sbjct: 42 KRFGIQ 47


>sp|ADEC_METTH|ADENINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 FGIQEG 9
FG+QEG
Sbjct: 412 FGLQEG 417


>sp|Y1514_METVS|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcus

Query: 1 YKRFGIQEGT 10
Y+RFGI+ T
Sbjct: 88 YERFGIKAVT 97


>sp|RL3_METS5|LARGE ribosomal subunit protein uL3|Metallosphaera sedula (strain ATCC

Query: 2 KRFGIQE 8
KR+G+QE
Sbjct: 221 KRYGVQE 227


>sp|Y034_PYRHO|UPF0284 protein PH0034|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YKRFGIQEG 9
+KR GI++G
Sbjct: 182 FKRVGIEKG 190


>sp|AROB_THEVO|3-DEHYDROQUINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KRFGIQE 8
KR+GI+E
Sbjct: 293 KRYGIEE 299


>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RFGIQEG 9
+FGI+EG
Sbjct: 223 KFGIEEG 229


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KRFGIQE 8
K+FGI+E
Sbjct: 307 KKFGIEE 313




5|Sequence|21|30|IQEGTQCTKC

>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 QEGTQCTKC 10
++G QC KC
Sbjct: 704 EQGNQCPKC 712


>sp|CSA2A_SACS2|CRISPR-ASSOCIATED protein Cas7/Csa2 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IQEGTQCT 8
+ EGT+CT
Sbjct: 98 VHEGTKCT 105


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 GTQCTKC 10
G QC KC
Sbjct: 153 GDQCEKC 159


>sp|PURL_PYRCJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 IQEGTQCTK 9
+QE QC K
Sbjct: 236 VQEARQCVK 244


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 QEGTQCTKC 10
Q+G QC C
Sbjct: 151 QKGDQCEVC 159


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 QEGTQCTKC 10
+ GT C KC
Sbjct: 85 KAGTPCKKC 93


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 EGTQCTKC 10
E QCT+C
Sbjct: 18 ERKQCTEC 25


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 EGTQCTKC 10
E QCT+C
Sbjct: 18 ERKQCTEC 25


>sp|PYRI_HALWD|ASPARTATE carbamoyltransferase regulatory chain|Haloquadratum walsbyi (strain

Query: 1 IQEGTQCTKC 10
+ EG QC C
Sbjct: 153 LDEGLQCDYC 162


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 QEGTQCTKC 10
Q G QC C
Sbjct: 151 QRGDQCEVC 159


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 QEGTQCTKC 10
Q G QC C
Sbjct: 151 QRGDQCEVC 159


>sp|SYM_PYRHO|METHIONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 QEGTQCTKC 10
Q G QC C
Sbjct: 151 QRGDQCEVC 159


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QEGTQCTKC 10
Q G QC C
Sbjct: 151 QRGDQCEVC 159


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 EGTQCTKC 10
E QCT+C
Sbjct: 18 ERKQCTEC 25


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 EGTQCTKC 10
E QCT+C
Sbjct: 18 ERKQCTEC 25


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 2 QEGTQCTKC 10
++ T+C KC
Sbjct: 1059 RQRTRCVKC 1067


>sp|THIRX_METJA|THIOREDOXIN jannaschii (strain ATCC 43067

Query: 4 GTQCTKC 10
GT C KC
Sbjct: 12 GTGCPKC 18




6|Sequence|26|35|QCTKCKNNWA

>sp|RL37A_AERPE|LARGE ribosomal subunit protein eL43|Aeropyrum pernix (strain ATCC

Query: 2 CTKCKNNWA 10
C KC N WA
Sbjct: 57 CRKCGNTWA 65


>sp|TFS_METTH|TRANSCRIPTION factor S|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 QCTKCKNNW 9
+CT+CK+ W
Sbjct: 92 RCTRCKHTW 100


>sp|AGLC_METVO|DOLICHYL N-acetyl-alpha-D-glucosaminyl phosphate

Query: 3 TKCKNNW 9
TKC NW
Sbjct: 18 TKCLENW 24


>sp|AMZA_PYRAE|ARCHAEMETZINCIN aerophilum (strain ATCC 51768

Query: 2 CTKCKNNWA 10
C KC+ N A
Sbjct: 144 CPKCRENLA 152


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 QCTKCKNNW 9
+CTKC ++
Sbjct: 1205 RCTKCNTSY 1213


>sp|RPO3_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo3|Sulfurisphaera tokodaii (strain DSM

Query: 1 QCTKCKNN 8
+C +CK N
Sbjct: 81 ECAECKEN 88


>sp|RPO3_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Sulfolobus acidocaldarius (strain

Query: 1 QCTKCKNN 8
+C +CK N
Sbjct: 81 ECAECKEN 88


>sp|TMPS_METJA|THYMIDYLATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CTKCKNNW 9
C C+ NW
Sbjct: 50 CYNCRGNW 57


>sp|NPD1_ARCFU|NAD-DEPENDENT protein deacylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QCTKCKNNW 9
+CT C N++
Sbjct: 123 RCTSCNNSF 131


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 QCTKCK 6
QC++CK
Sbjct: 21 QCSECK 26


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 QCTKCKNNW 9
+C KCK ++
Sbjct: 1059 RCPKCKTSY 1067


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 QCTKCKNNW 9
+CTKC +
Sbjct: 1011 RCTKCNRKY 1019


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 QCTKCKNNW 9
+CTKC +
Sbjct: 1162 RCTKCDTTY 1170


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 QCTKCKN 7
+CT+C N
Sbjct: 404 KCTQCMN 410


>sp|TFS_THECE|TRANSCRIPTION factor S|Thermococcus celer

Query: 1 QCTKCKNNW 9
+CTKC + W
Sbjct: 98 KCTKCGHTW 106


>sp|Y1437_METM6|UPF0280 protein MmarC6_1437|Methanococcus maripaludis (strain C6 /

Query: 2 CTKCKNN 8
C KC+N+
Sbjct: 113 CLKCEND 119


>sp|TFS_ARCFU|TRANSCRIPTION factor S|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QCTKCKNNW 9
+CTKC W
Sbjct: 91 RCTKCGKTW 99


>sp|RL37A_PYRHO|LARGE ribosomal subunit protein eL43|Pyrococcus horikoshii (strain ATCC

Query: 1 QCTKC 5
QCTKC
Sbjct: 55 QCTKC 59


>sp|RL37A_DESA1|LARGE ribosomal subunit protein eL43|Desulfurococcus amylolyticus

Query: 2 CTKCKNNWA 10
C KC WA
Sbjct: 57 CKKCGAKWA 65




7|Sequence|31|40|KNNWALKFSI

>sp|HIS8_METM6|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C6 /

Query: 3 NWALKF 8
NWALK+
Sbjct: 212 NWALKY 217


>sp|HIS8_METM5|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C5 /

Query: 3 NWALKF 8
NWALK+
Sbjct: 212 NWALKY 217


>sp|SYK_METJA|LYSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NWALKF 8
NWALK+
Sbjct: 426 NWALKY 431


>sp|RL34_SULAC|LARGE ribosomal subunit protein eL34|Sulfolobus acidocaldarius (strain

Query: 1 KNNWALKFS 9
KNN+ K+S
Sbjct: 48 KNNYTYKYS 56


>sp|TDXH2_PICTO|PEROXIREDOXIN 2|Picrophilus torridus (strain ATCC 700027

Query: 1 KNNWALKFS 9
KN W L FS
Sbjct: 27 KNKWVLLFS 35


>sp|PELO_METS3|PROTEIN pelota homolog|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 NWALK 7
NWALK
Sbjct: 119 NWALK 123




8|Sequence|36|45|LKFSIILLYI

***** No hits found ******


9|Sequence|41|50|ILLYILCALL

>sp|Y1461_METJA|UNCHARACTERIZED protein MJ1461|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LYILCAL 9
LYILC L
Sbjct: 119 LYILCGL 125




10|Sequence|46|55|LCALLTITVA

>sp|Y1856_ARCFU|UNCHARACTERIZED protein AF_1856|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LCALLTIT 8
LCAL TIT
Sbjct: 384 LCALNTIT 391




11|Sequence|51|60|TITVAILGYK

>sp|ILVC_NATPD|KETOL-ACID reductoisomerase (NADP(+))|Natronomonas pharaonis (strain ATCC

Query: 3 TVAILGY 9
TVA+LGY
Sbjct: 21 TVAVLGY 27


>sp|ILVC_HALWD|KETOL-ACID reductoisomerase (NADP(+))|Haloquadratum walsbyi (strain DSM

Query: 3 TVAILGY 9
TVA+LGY
Sbjct: 43 TVAVLGY 49


>sp|ILVC_HALMA|KETOL-ACID reductoisomerase (NADP(+))|Haloarcula marismortui (strain ATCC

Query: 3 TVAILGY 9
TVA+LGY
Sbjct: 24 TVAVLGY 30


>sp|ILVC_IGNAA|KETOL-ACID reductoisomerase (NAD(P)(+))|Ignisphaera aggregans (strain DSM

Query: 3 TVAILGY 9
T+AILGY
Sbjct: 19 TIAILGY 25


>sp|ILVC_METTP|KETOL-ACID reductoisomerase (NADP(+))|Methanothrix thermoacetophila (strain

Query: 3 TVAILGY 9
T+AI+GY
Sbjct: 19 TIAIIGY 25


>sp|ILVC_METBF|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina barkeri (strain Fusaro

Query: 3 TVAILGY 9
T+AI+GY
Sbjct: 19 TIAIMGY 25


>sp|ILVC_CENSY|KETOL-ACID reductoisomerase (NADP(+))|Cenarchaeum symbiosum (strain A)

Query: 3 TVAILGY 9
TVA++GY
Sbjct: 19 TVAVIGY 25


>sp|ILVC_METKA|KETOL-ACID reductoisomerase (NADP(+))|Methanopyrus kandleri (strain AV19 /

Query: 3 TVAILGY 9
TVA++GY
Sbjct: 19 TVAVIGY 25


>sp|ILVC_METS3|KETOL-ACID reductoisomerase (NADP(+))|Methanobrevibacter smithii (strain

Query: 3 TVAILGY 9
TVA++GY
Sbjct: 18 TVAVMGY 24


>sp|ILVC_METAC|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina acetivorans (strain

Query: 3 TVAILGY 9
T+AI+GY
Sbjct: 19 TIAIMGY 25


>sp|ILVC_SULTO|KETOL-ACID reductoisomerase (NADP(+))|Sulfurisphaera tokodaii (strain DSM

Query: 3 TVAILGY 9
T+A+LGY
Sbjct: 19 TIAVLGY 25


>sp|ILVC_UNCAG|KETOL-ACID reductoisomerase (NAD(+))|Uncultured archaeon GZfos26G2

Query: 3 TVAILGY 9
T+A++GY
Sbjct: 18 TIAVMGY 24


>sp|ILVC_PYRAB|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus abyssi (strain GE5 /

Query: 3 TVAILGY 9
TVA++GY
Sbjct: 22 TVAVIGY 28


>sp|ILVC_NITMS|KETOL-ACID reductoisomerase (NADP(+))|Nitrosopumilus maritimus (strain SCM1)

Query: 3 TVAILGY 9
T+A++GY
Sbjct: 19 TIAVIGY 25


>sp|ILVC_PYRFU|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus furiosus (strain ATCC 43587

Query: 3 TVAILGY 9
TVA++GY
Sbjct: 22 TVAVIGY 28


>sp|ILVC_METMA|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina mazei (strain ATCC

Query: 3 TVAILGY 9
T+A++GY
Sbjct: 19 TIAVMGY 25


>sp|ILVC_METMJ|KETOL-ACID reductoisomerase (NADP(+))|Methanoculleus marisnigri (strain ATCC

Query: 3 TVAILGY 9
T+A++GY
Sbjct: 19 TIAVIGY 25




12|Sequence|56|65|ILGYKVVEKM

>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ILGYKVVEK 9
+LG++V+EK
Sbjct: 124 VLGFEVIEK 132


>sp|Y3501_METJA|UNCHARACTERIZED protein MJECL01|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LGYKVVEKM 10
+GYK VEK
Sbjct: 233 IGYKAVEKF 241


>sp|Y1682_PYRHO|UPF0145 protein PH1682|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ILGYKVVE 8
I GYKVVE
Sbjct: 18 IPGYKVVE 25


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ILGYKVVEK 9
+LG++VVE+
Sbjct: 123 VLGFEVVER 131


>sp|ISF3_ARCFU|IRON-SULFUR flavoprotein AF_1896|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 YKVVEKM 10
YKV+EKM
Sbjct: 64 YKVLEKM 70


>sp|PYRI_METMJ|ASPARTATE carbamoyltransferase regulatory chain|Methanoculleus marisnigri

Query: 1 ILGYKVVEK 9
I YKVVEK
Sbjct: 90 IRNYKVVEK 98


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 2 LGYKVVEKM 10
LGY VV+K+
Sbjct: 34 LGYDVVDKV 42


>sp|Y1201_ARCFU|UNCHARACTERIZED protein AF_1201|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LGYKVVEK 9
+GYK+VE+
Sbjct: 207 IGYKIVEE 214


>sp|UBIX_ARCFU|FLAVIN prenyltransferase UbiX|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILGYKVVEKM 10
ILG +++EK+
Sbjct: 14 ILGIRLIEKL 23


>sp|RL18_THESM|LARGE ribosomal subunit protein uL18|Thermococcus sibiricus (strain DSM

Query: 1 ILGYKVVEK 9
++GYK +EK
Sbjct: 89 LIGYKALEK 97


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 ILGYKVVEK 9
+LG++V+E+
Sbjct: 123 VLGFEVIER 131


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 ILGYKVVE 8
++G+K++E
Sbjct: 110 VIGFKIIE 117


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ILGYKVVEK 9
+LG++V+E+
Sbjct: 124 VLGFEVIER 132


>sp|Y453_ARCFU|UNCHARACTERIZED protein AF_0453|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GYKVVEK 9
GYK++E+
Sbjct: 16 GYKIIER 22


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ILGYKVVEK 9
+LG++V+E+
Sbjct: 126 VLGFEVIER 134


>sp|PYRI_PYRHO|ASPARTATE carbamoyltransferase regulatory chain|Pyrococcus horikoshii

Query: 1 ILGYKVVEK 9
I YKVVEK
Sbjct: 85 IRNYKVVEK 93


>sp|BIOA_METJA|ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GYKVVEKM 10
GY+V EK+
Sbjct: 411 GYRVAEKL 418




13|Sequence|61|70|VVEKMDNVTG

>sp|Y1170_METST|PUTATIVE nickel insertion protein|Methanosphaera stadtmanae (strain ATCC

Query: 1 VVEKMDNVT 9
++EK+D++T
Sbjct: 77 IIEKLDDIT 85


>sp|RPO11_HALMA|DNA-DIRECTED RNA polymerase subunit Rpo11|Haloarcula marismortui (strain ATCC

Query: 1 VVEKMDNVT 9
V+EK DN T
Sbjct: 79 VIEKADNFT 87


>sp|PTH_THEAC|PEPTIDYL-TRNA hydrolase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 EKMDNVTG 10
EK+D +TG
Sbjct: 105 EKLDKITG 112


>sp|PUR7_METKA|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 VEKMDNVTG 10
+EKMD V G
Sbjct: 38 MEKMDTVEG 46


>sp|PTH_METJA|PEPTIDYL-TRNA hydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EKMDNVTG 10
EK+D +TG
Sbjct: 103 EKIDKITG 110


>sp|EF1A_METKA|ELONGATION factor 1-alpha|Methanopyrus kandleri (strain AV19 /

Query: 1 VVEKMDNVTG 10
++EK+D TG
Sbjct: 353 LIEKIDPATG 362


>sp|APGM2_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanocaldococcus jannaschii (strain

Query: 1 VVEKMDNVTG 10
V+EK+D + G
Sbjct: 317 VIEKIDKLIG 326




14|Sequence|66|75|DNVTGGMETS

>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 1 DNVTGGMETS 10
D +TGG+E +
Sbjct: 306 DTITGGLEVT 315


>sp|Y189_METAR|UPF0313 protein UNCMA_01890|Methanocella arvoryzae (strain DSM 22066

Query: 3 VTGGMETS 10
+TGG+E S
Sbjct: 127 ITGGLEAS 134


>sp|PANE_HALSA|2-DEHYDROPANTOATE 2-reductase|Halobacterium salinarum (strain ATCC 700922

Query: 4 TGGMETS 10
TGGMET+
Sbjct: 167 TGGMETT 173


>sp|MTSA_METMA|METHYLATED-THIOL--COENZYME M methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DNVTGGME 8
+NV GGM+
Sbjct: 359 ENVLGGMQ 366


>sp|MTSA_METBA|METHYLATED-THIOL--COENZYME M methyltransferase|Methanosarcina barkeri

Query: 1 DNVTGGME 8
+NV GGM+
Sbjct: 359 ENVLGGMQ 366


>sp|ASSY_NATPD|ARGININOSUCCINATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DNVTGGMETS 10
++VTGG+E S
Sbjct: 365 EDVTGGIEQS 374




15|Sequence|71|80|GMETSRQTYD

>sp|GSA_HALSA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 700922

Query: 3 ETSRQTYD 10
ETSR+ YD
Sbjct: 4 ETSRELYD 11


>sp|GSA_HALS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 29341

Query: 3 ETSRQTYD 10
ETSR+ YD
Sbjct: 4 ETSRELYD 11




16|Sequence|76|85|RQTYDDKLTA

>sp|NREA_ARCFU|DNA repair protein NreA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QTYDDKLTA 10
+++DD LTA
Sbjct: 357 ESFDDALTA 365


>sp|METK_SACS2|S-ADENOSYLMETHIONINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 TYDDKLT 9
TYD KLT
Sbjct: 365 TYDGKLT 371


>sp|NEP1_METJA|RIBOSOMAL RNA small subunit methyltransferase|Methanocaldococcus jannaschii

Query: 2 QTYDDKL 8
TYDDK+
Sbjct: 81 HTYDDKV 87


>sp|BIOB_META3|BIOTIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 QTYDDKLTA 10
TYDDK+ +
Sbjct: 178 HTYDDKVKS 186




17|Sequence|81|90|DKLTAVESDL

>sp|Y1397_METJA|UNCHARACTERIZED protein MJ1397|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KLTAVESDL 10
KLT VE DL
Sbjct: 429 KLTDVEKDL 437


>sp|SPH1_HALSI|SMC-LIKE protein Sph1|Halobacterium salinarum (Halobacterium halobium)

Query: 1 DKLTAVESDL 10
D+LTA +SDL
Sbjct: 211 DELTAKQSDL 220


>sp|SPH1_HALSA|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 700922

Query: 1 DKLTAVESDL 10
D+LTA +SDL
Sbjct: 211 DELTAKQSDL 220


>sp|SPH1_HALS3|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 29341

Query: 1 DKLTAVESDL 10
D+LTA +SDL
Sbjct: 211 DELTAKQSDL 220


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LTAVESDL 10
+TAVE+DL
Sbjct: 472 VTAVEADL 479


>sp|TREZ_SACS2|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DKLTAVESDL 10
DK+ ESDL
Sbjct: 280 DKIVIAESDL 289


>sp|RSMA_HALMA|PROBABLE ribosomal RNA small subunit|Haloarcula marismortui (strain ATCC

Query: 1 DKLTAVESD 9
D+LT VE D
Sbjct: 99 DRLTIVEGD 107




18|Sequence|86|95|VESDLKKLGD

>sp|REP75_PYRAB|REPLICATION initiator protein|Pyrococcus abyssi (strain GE5 /

Query: 2 ESDLKKLGD 10
ESDLKKL D
Sbjct: 393 ESDLKKLRD 401


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 ESDLKKLGD 10
+ D+KK+GD
Sbjct: 113 DDDIKKMGD 121


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 ESDLKKLGD 10
E ++KK+GD
Sbjct: 113 EEEIKKMGD 121


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 ESDLKKLGD 10
E ++KK+GD
Sbjct: 113 EEEIKKMGD 121


>sp|UDGA_ARCFU|TYPE-4 uracil-DNA glycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ESDLKKLGD 10
ESD KK+G+
Sbjct: 178 ESDFKKIGE 186


>sp|RS5_METS3|SMALL ribosomal subunit protein uS5|Methanobrevibacter smithii (strain

Query: 2 ESDLKKLG 9
E+DLKK+G
Sbjct: 203 EADLKKMG 210


>sp|ARGC_METJA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VESDLKKLG 9
+E +LKKLG
Sbjct: 213 IEKELKKLG 221


>sp|GUAAA_PICTO|GMP synthase [glutamine-hydrolyzing] subunit A|Picrophilus torridus

Query: 1 VESDLKKLGD 10
+ES++ KLG+
Sbjct: 54 IESEISKLGN 63


>sp|KTHY_META3|PROBABLE thymidylate kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VESDLKKLGD 10
+E LK++GD
Sbjct: 124 IEESLKRMGD 133


>sp|SYR_METPE|ARGININE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 ESDLKKLGD 10
ESD K+GD
Sbjct: 251 ESDFVKIGD 259


>sp|Y1027_METJA|UNCHARACTERIZED protein MJ1027|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VESDLKKLG 9
+ SD++K+G
Sbjct: 228 IHSDMRKMG 236


>sp|Y1399_METJA|UPF0200 protein MJ1399|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VESDLKKLG 9
VE DL++LG
Sbjct: 137 VERDLRELG 145


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 DLKKLG 9
DLKKLG
Sbjct: 187 DLKKLG 192


>sp|COFG_META3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VESDLKKLG 9
++ DLKK+G
Sbjct: 105 IKEDLKKMG 113




19|Sequence|91|100|KKLGDQTGKK

>sp|MNTP_METST|MANGANESE exporter MntP|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KKLGDQTGKK 10
KKLGD G K
Sbjct: 151 KKLGDYFGDK 160


>sp|HIS7_CALMQ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 KKLGDQTG 8
K LGD+TG
Sbjct: 80 KALGDRTG 87


>sp|SYK2_METAC|LYSINE--TRNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LGDQTGK 9
LGDQTG+
Sbjct: 95 LGDQTGR 101


>sp|APGM_PYRAR|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 KKLGDQTGKK 10
KK+G++ G+K
Sbjct: 127 KKIGEEVGRK 136


>sp|CP119_SULAC|CYTOCHROME P450 119|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KLGDQT 7
KLGDQT
Sbjct: 266 KLGDQT 271


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 KKLGDQTG 8
+KLGD+ G
Sbjct: 1060 RKLGDRNG 1067


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KKLGDQTGKK 10
+K+GD+ GKK
Sbjct: 417 EKVGDKFGKK 426


>sp|PURP_METBU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcoides burtonii (strain DSM

Query: 2 KLGDQTGK 9
KLG +TGK
Sbjct: 342 KLGAKTGK 349


>sp|APGM_PYRAE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KLGDQTGKK 10
K+G++ GKK
Sbjct: 128 KIGEEIGKK 136


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KKLGDQTGKK 10
KK+G GKK
Sbjct: 885 KKIGPSFGKK 894


>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KKLGDQTGK 9
+++ DQTGK
Sbjct: 310 EEVADQTGK 318


>sp|UDGA_ARCFU|TYPE-4 uracil-DNA glycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KKLGDQTGKK 10
KK+G+ GKK
Sbjct: 182 KKIGELCGKK 191




20|Sequence|96|105|QTGKKAISTN

***** No hits found ******


21|Sequence|101|110|AISTNSELST

>sp|HERA_SULTO|DNA double-strand break repair helicase|Sulfurisphaera tokodaii (strain

Query: 2 ISTNSELST 10
++TN ELST
Sbjct: 105 LATNEELST 113




22|Sequence|106|115|SELSTFRSDI

>sp|SYN_THEGJ|ASPARAGINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 SELSTFRSDI 10
SE+ TFR D+
Sbjct: 256 SEIETFRKDL 265


>sp|FMDC_METWO|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 2 ELSTFRSD 9
E+STF+ D
Sbjct: 220 EISTFKED 227


>sp|FMDC_METTM|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 2 ELSTFRSD 9
E+STF+ D
Sbjct: 220 EISTFKED 227


>sp|FMDC_METTH|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 2 ELSTFRSD 9
E+STF+ D
Sbjct: 220 EISTFKED 227


>sp|RNZ_METM6|RIBONUCLEASE Z|Methanococcus maripaludis (strain C6 /

Query: 2 ELSTFRSDI 10
ELS F +DI
Sbjct: 276 ELSAFENDI 284




23|Sequence|111|120|FRSDILDLRQ

>sp|GLYA_PYRHO|SERINE hydroxymethyltransferase|Pyrococcus horikoshii (strain ATCC

Query: 1 FRSDILDLR 9
F+SD DLR
Sbjct: 81 FKSDYADLR 89


>sp|GLYA_PYRFU|SERINE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FRSDILDLR 9
F+SD DLR
Sbjct: 81 FKSDYADLR 89


>sp|GLYA_PYRAB|SERINE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 FRSDILDLR 9
F+SD DLR
Sbjct: 81 FKSDYADLR 89


>sp|SYP_METLZ|PROLINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 RSDILDLR 9
R+DI+D+R
Sbjct: 24 RADIMDVR 31


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 FRSDILDLR 9
FR DI DL+
Sbjct: 637 FRGDIEDLK 645




24|Sequence|116|125|LDLRQQLREI

>sp|Y3125_METAC|UPF0228 protein MA_3125|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LDLRQQLRE 9
LD+R++LR+
Sbjct: 91 LDIRRELRK 99


>sp|SYC_SACS2|CYSTEINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LDLRQQLREI 10
+D+R QLR++
Sbjct: 429 VDIRNQLRQM 438


>sp|PDXS_PYRAE|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum aerophilum (strain

Query: 1 LDLRQQLRE 9
LDLR LRE
Sbjct: 21 LDLRDTLRE 29


>sp|SYC_STAMF|CYSTEINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 LDLRQQLRE 9
+D+R++LRE
Sbjct: 435 VDIRRELRE 443


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 DLRQQLREI 10
+LR+QLR+I
Sbjct: 34 ELREQLRQI 42


>sp|ATGT_METMP|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LDLRQQLREI 10
LDLRQ+ E+
Sbjct: 172 LDLRQKSAEV 181


>sp|ATGT_METM7|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C7 /

Query: 1 LDLRQQLREI 10
LDLRQ+ E+
Sbjct: 172 LDLRQKSAEV 181


>sp|ATGT_METM5|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C5 /

Query: 1 LDLRQQLREI 10
LDLRQ+ E+
Sbjct: 172 LDLRQKSAEV 181


>sp|FAU1_STAMF|PROBABLE ribonuclease FAU-1|Staphylothermus marinus (strain ATCC 43588

Query: 2 DLRQQLREI 10
+L+Q+LRE+
Sbjct: 216 ELKQKLREL 224


>sp|RL19E_HALSA|LARGE ribosomal subunit protein eL19|Halobacterium salinarum (strain ATCC

Query: 4 RQQLREI 10
RQQLRE+
Sbjct: 103 RQQLREL 109


>sp|DNAG_HYPBU|DNA primase DnaG|Hyperthermus butylicus (strain DSM 5456

Query: 2 DLRQQLREI 10
DLR+ LREI
Sbjct: 130 DLREVLREI 138




25|Sequence|121|130|QLREITEKTS

>sp|GLYA_HYPBU|SERINE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 QLREITEKT 9
+LRE+ EKT
Sbjct: 15 ELREVLEKT 23


>sp|MDH_PYRCJ|MALATE dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 QLREITEKT 9
QLRE+ E+T
Sbjct: 199 QLREVVEET 207


>sp|LYSJ_SACS2|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Saccharolobus

Query: 2 LREITEKTS 10
LRE+TEK +
Sbjct: 194 LREVTEKVN 202


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LREITEKTS 10
LREITE+ +
Sbjct: 229 LREITEENN 237


>sp|RS10_METJA|SMALL ribosomal subunit protein uS10|Methanocaldococcus jannaschii

Query: 1 QLREITEKTS 10
Q++EI EKT
Sbjct: 22 QIKEIAEKTG 31


>sp|HIS4_METTH|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanothermobacter

Query: 2 LREITEKTS 10
L+EITE+ S
Sbjct: 65 LKEITERVS 73


>sp|MDH_PYRAE|MALATE dehydrogenase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 QLREITEKT 9
QL+E+ E+T
Sbjct: 199 QLKEVVEET 207


>sp|GLMS_METMP|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanococcus maripaludis (strain

Query: 1 QLREITEKT 9
+EITEKT
Sbjct: 138 DFKEITEKT 146


>sp|RL11_KORCO|LARGE ribosomal subunit protein uL11|Korarchaeum cryptofilum (strain

Query: 2 LREITEKTS 10
++EI EKTS
Sbjct: 36 VKEINEKTS 44


>sp|HIS4_METLZ|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanocorpusculum labreanum

Query: 2 LREITEKT 9
+RE+ EKT
Sbjct: 65 IREVVEKT 72


>sp|DTDA_METKA|D-AMINOACYL-TRNA deacylase|Methanopyrus kandleri (strain AV19 /

Query: 1 QLREITEKT 9
Q RE+ +KT
Sbjct: 232 QFREVVDKT 240




26|Sequence|126|135|TEKTSKNKDT

>sp|TRPE_METJA|ANTHRANILATE synthase component 1|Methanocaldococcus jannaschii (strain ATCC

Query: 2 EKTSKNKD 9
EKT++NKD
Sbjct: 187 EKTTENKD 194




27|Sequence|131|140|KNKDTLEKLQ

>sp|Y973_METJA|UNCHARACTERIZED protein MJ0973|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KNKDTLEKLQ 10
KNKD +EKL+
Sbjct: 151 KNKDRIEKLE 160


>sp|PGP_PYRIL|PHOSPHOGLYCOLATE phosphatase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 KDTLEKLQ 10
KDTLEK++
Sbjct: 119 KDTLEKVR 126


>sp|SYS_METBF|SERINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KNKDTLEKLQ 10
+NKDTL K++
Sbjct: 65 ENKDTLSKIE 74


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KNKDTLEKL 9
KNKD L+KL
Sbjct: 353 KNKDDLQKL 361


>sp|THIC_METHJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 NKDTLEKLQ 10
N+ TLE+LQ
Sbjct: 166 NRITLERLQ 174


>sp|RS24_SULAC|SMALL ribosomal subunit protein eS24|Sulfolobus acidocaldarius (strain

Query: 1 KNKDTLEKLQ 10
K+KD+L+KL+
Sbjct: 85 KDKDSLQKLE 94


>sp|ARLY_METPE|ARGININOSUCCINATE lyase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 KNKDTLEKLQ 10
KN DTLE ++
Sbjct: 286 KNPDTLEIMR 295


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 3 KDTLEK 8
KDTLEK
Sbjct: 75 KDTLEK 80


>sp|SYS_METAC|SERINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KNKDTLEKL 9
+NKDTL K+
Sbjct: 65 ENKDTLSKI 73


>sp|ARLY_HALMA|ARGININOSUCCINATE lyase|Haloarcula marismortui (strain ATCC 43049

Query: 1 KNKDTLE 7
KN DTLE
Sbjct: 291 KNPDTLE 297


>sp|ARLY_METLZ|ARGININOSUCCINATE lyase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KNKDTLEKLQ 10
KN DTLE ++
Sbjct: 286 KNPDTLEIMR 295


>sp|BGAL_PYRWO|BETA-GALACTOSIDASE woesei

Query: 3 KDTLEKL 9
KDTLE+L
Sbjct: 115 KDTLEEL 121


>sp|Y890_METJA|UPF0148 protein MJ0890|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KNKDTLEK 8
KNK+T+EK
Sbjct: 64 KNKETIEK 71




28|Sequence|136|145|LEKLQASGDA

>sp|NTPTH_KORCO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LEKLQASG 8
LEKL+ASG
Sbjct: 25 LEKLRASG 32


>sp|BPSA_THEKO|N(4)-BIS(AMINOPROPYL)SPERMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LEKLQASGD 9
L +QASGD
Sbjct: 25 LSAIQASGD 33


>sp|RLME_METMA|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina mazei (strain

Query: 1 LEKLQASGD 9
+EKL +SGD
Sbjct: 207 IEKLGSSGD 215




29|Sequence|141|150|ASGDALVDRQ

>sp|Y1120_ARCFU|UNCHARACTERIZED protein AF_1120|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SGDALVD 8
SGDALVD
Sbjct: 77 SGDALVD 83


>sp|Y252_PYRCJ|UPF0248 protein Pcal_0252|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ASGDALVDRQ 10
A+G+ L+DR+
Sbjct: 66 ATGEVLLDRR 75


>sp|MTAD_HALSA|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Halobacterium salinarum (strain ATCC 700922

Query: 3 GDALVDR 9
GD LVDR
Sbjct: 22 GDVLVDR 28




30|Sequence|146|155|LVDRQSQLKE

***** No hits found ******


31|Sequence|151|160|SQLKETLENN

>sp|MCR_SULTO|MALONYL-COA reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 QLKETLEN 9
++KETLEN
Sbjct: 264 KVKETLEN 271


>sp|Y779_METJA|UNCHARACTERIZED protein MJ0779|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 ETLENN 10
ETLENN
Sbjct: 81 ETLENN 86


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 3 LKETLENN 10
KETLE N
Sbjct: 78 FKETLEKN 85


>sp|SYC_METBF|CYSTEINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 QLKETLEN 9
+LKETLEN
Sbjct: 322 RLKETLEN 329


>sp|PFDA_PYRAB|PREFOLDIN subunit alpha|Pyrococcus abyssi (strain GE5 /

Query: 3 LKETLEN 9
+KETLEN
Sbjct: 42 VKETLEN 48




32|Sequence|156|165|TLENNSFLIT

>sp|Y959_METJA|UNCHARACTERIZED aminotransferase MJ0959|Methanocaldococcus jannaschii (strain

Query: 3 ENNSFLIT 10
EN++FLIT
Sbjct: 56 ENDTFLIT 63


>sp|DPCKG_NITMS|GTP-DEPENDENT dephospho-CoA kinase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 LENNSFLIT 10
LE NS++IT
Sbjct: 23 LEENSYIIT 31


>sp|Y1579_SACI1|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 3 ENNSFLIT 10
ENN +L+T
Sbjct: 235 ENNRYLVT 242


>sp|Y1269_SACI7|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 3 ENNSFLIT 10
ENN +L+T
Sbjct: 235 ENNRYLVT 242


>sp|AROB_THEVO|3-DEHYDROQUINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LENNSFLI 9
L+NNSF+I
Sbjct: 169 LKNNSFII 176


>sp|ARGJ_METM6|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 TLENNSFLI 9
+LEN +FL+
Sbjct: 341 SLENQAFLV 349


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ENNSFLI 9
+NNSFLI
Sbjct: 577 KNNSFLI 583




33|Sequence|161|170|SFLITTVNKT

***** No hits found ******


34|Sequence|166|175|TVNKTLQAYN

>sp|Y1489_METJA|MCM-LIKE protein MJ1489|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TVNKTLQAY 9
TVNK LQ+Y
Sbjct: 398 TVNKELQSY 406


>sp|GSA_METMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VNKTLQAYN 10
+ KTL+AY+
Sbjct: 413 IEKTLEAYS 421


>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 VNKTLQA 8
VNKTL+A
Sbjct: 408 VNKTLEA 414


>sp|GSA_METAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VNKTLQAY 9
+ KTL+AY
Sbjct: 413 IEKTLEAY 420


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 NKTLQAYN 10
NKT+ YN
Sbjct: 1433 NKTINGYN 1440


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 VNKTLQAYN 10
+N TL YN
Sbjct: 313 INSTLDGYN 321




35|Sequence|171|180|LQAYNGYVTN

>sp|GATA_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Haloarcula marismortui (strain ATCC

Query: 1 LQAYNGYVTN 10
+ YNGYVT+
Sbjct: 1 MTEYNGYVTD 10


>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LQAYNGYVTN 10
L A+NG+V N
Sbjct: 680 LDAFNGFVDN 689


>sp|Y1349_METJA|UNCHARACTERIZED protein MJ1349|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YNGYVT 9
YNGY+T
Sbjct: 331 YNGYIT 336


>sp|PURO_METM5|IMP cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 2 QAYNGYVTN 10
+AY GYVT+
Sbjct: 121 EAYMGYVTD 129


>sp|PURO_METMP|IMP cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 2 QAYNGYVTN 10
+AY GYVT+
Sbjct: 121 EAYMGYVTD 129


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 3 AYNGYV 8
+YNGYV
Sbjct: 1573 SYNGYV 1578


>sp|HACA_METJA|METHANOGEN homoaconitase large subunit|Methanocaldococcus jannaschii (strain

Query: 1 LQAYNGYVTN 10
+ A GY+TN
Sbjct: 408 ISAVKGYITN 417


>sp|DGGGP_THEPD|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermofilum pendens (strain DSM 2475

Query: 1 LQAYNGYV 8
L AY GYV
Sbjct: 30 LGAYTGYV 37


>sp|RF1_PYRAE|PEPTIDE chain release factor subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 LQAYNGYV 8
+QA+ GYV
Sbjct: 359 MQAFGGYV 366


>sp|Y776_NATPD|UPF0213 protein NP_0776A|Natronomonas pharaonis (strain ATCC 35678

Query: 4 YNGYVTN 10
Y GY TN
Sbjct: 18 YTGYTTN 24


>sp|RL10_HALMA|LARGE ribosomal subunit protein uL10|Haloarcula marismortui (strain

Query: 1 LQAYNGYVT 9
L+ NGY+T
Sbjct: 78 LEDLNGYIT 86


>sp|PURO_METM6|IMP cyclohydrolase|Methanococcus maripaludis (strain C6 /

Query: 3 AYNGYVTN 10
AY GYVT+
Sbjct: 122 AYMGYVTD 129


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YNGYV 8
YNGYV
Sbjct: 765 YNGYV 769




36|Sequence|176|185|GYVTNLQQDT

>sp|NUCS_SULAC|ENDONUCLEASE NucS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YVTNLQQD 9
YV NLQ+D
Sbjct: 243 YVPNLQRD 250


>sp|Y604_ARCFU|UNCHARACTERIZED protein AF_0604|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GYVTNLQQD 9
GY NL++D
Sbjct: 82 GYYENLEED 90


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GYVTNLQQD 9
GYV NL+++
Sbjct: 519 GYVGNLEEE 527


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GYVTNLQQDT 10
G + N+Q+DT
Sbjct: 395 GKIPNVQKDT 404




37|Sequence|181|190|LQQDTSVLQG

>sp|Y231_METJA|UNCHARACTERIZED protein MJ0231|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LQQDTSVLQG 10
+Q+D SVL+G
Sbjct: 232 VQRDRSVLKG 241




38|Sequence|186|195|SVLQGNLQNQ

>sp|CCA_METJA|CCA-ADDING enzyme|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VLQGNLQN 9
++ GNLQN
Sbjct: 411 IVNGNLQN 418




39|Sequence|191|200|NLQNQMYSHN

>sp|F16PA_METHJ|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LQNQMYSH 9
L NQMY H
Sbjct: 47 LDNQMYEH 54


>sp|TFE_HALWD|TRANSCRIPTION factor E|Haloquadratum walsbyi (strain DSM 16790

Query: 1 NLQNQMY 7
NLQ++MY
Sbjct: 92 NLQSEMY 98




40|Sequence|196|205|MYSHNVVIMN

>sp|SPCS_METMP|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 YSHNVVIMN 10
Y+H+ ++MN
Sbjct: 406 YTHDYIVMN 414




41|Sequence|201|210|VVIMNLNNLN

>sp|GLYA_METMA|SERINE hydroxymethyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VVIMNLNNLN 10
++++NLNN+N
Sbjct: 313 LMLVNLNNMN 322


>sp|GLYA_METBF|SERINE hydroxymethyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VVIMNLNNLN 10
++++NLNN+N
Sbjct: 313 LMLVNLNNMN 322


>sp|GLYA_METAC|SERINE hydroxymethyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 VVIMNLNNLN 10
++++NLNN+N
Sbjct: 313 LMLVNLNNMN 322


>sp|ADEC_METS3|ADENINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VVIMNLNNLN 10
VV+ NLN+LN
Sbjct: 329 VVVDNLNDLN 338


>sp|MVK_METJA|MEVALONATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VIMNLNNLN 10
+I+NLN+LN
Sbjct: 44 IILNLNDLN 52


>sp|CCA_SACSH|CCA-ADDING enzyme|Saccharolobus shibatae (strain ATCC 51178

Query: 2 VIMNLNNL 9
VI+N+NN+
Sbjct: 96 VIVNINNV 103




42|Sequence|206|215|LNNLNLTQVQ

>sp|GLYA_METMA|SERINE hydroxymethyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LNNLNLT 7
LNN+N+T
Sbjct: 318 LNNMNIT 324


>sp|GLYA_METBF|SERINE hydroxymethyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LNNLNLT 7
LNN+N+T
Sbjct: 318 LNNMNIT 324


>sp|GLYA_METAC|SERINE hydroxymethyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 LNNLNLT 7
LNN+N+T
Sbjct: 318 LNNMNIT 324




43|Sequence|211|220|LTQVQQRNLI

***** No hits found ******


44|Sequence|216|225|QRNLITNLQR

>sp|NADM_PYRHO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RNLITNLQ 9
RNL TNL+
Sbjct: 164 RNLATNLE 171


>sp|NADM_PYRAB|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 RNLITNLQ 9
RNL TNL+
Sbjct: 164 RNLATNLE 171


>sp|TOP6A_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 4 LITNLQR 10
L+TNLQR
Sbjct: 131 LLTNLQR 137




45|Sequence|221|230|TNLQRSVDDT

>sp|IF6_METLZ|TRANSLATION initiation factor 6|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 LQRSVDD 9
L+RS+DD
Sbjct: 167 LERSIDD 173


>sp|AATB_PICTO|A-TYPE ATP synthase subunit B|Picrophilus torridus (strain ATCC 700027

Query: 2 NLQRSVDDT 10
N++RS++DT
Sbjct: 418 NIERSIEDT 426




46|Sequence|226|235|SVDDTSQAIQ

>sp|Y1187_METJA|UNCHARACTERIZED protein MJ1187|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DDTSQAI 9
DDT QAI
Sbjct: 61 DDTEQAI 67


>sp|SYY_METBF|TYROSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 SVDDTSQAI 9
SVDDT + I
Sbjct: 221 SVDDTEEEI 229


>sp|KAD_METAC|ADENYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DDTSQAIQ 10
DDT++A+Q
Sbjct: 161 DDTAEAVQ 168


>sp|SYY_METMA|TYROSINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SVDDTSQAI 9
SVDDT + I
Sbjct: 221 SVDDTEEEI 229




47|Sequence|231|240|SQAIQRIKND

>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 QAIQRIKND 10
QA+ RIK D
Sbjct: 243 QAVLRIKTD 251


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 QAIQRIKND 10
QA+ RIK D
Sbjct: 243 QAVLRIKTD 251


>sp|UVRB_HALSA|UVRABC system protein B|Halobacterium salinarum (strain ATCC 700922

Query: 2 QAIQRIKND 10
QAI+RI+ D
Sbjct: 271 QAIERIRTD 279


>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 QAIQRIKND 10
QA+ RIK D
Sbjct: 243 QAVLRIKTD 251


>sp|REG2_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH0061|Pyrococcus horikoshii

Query: 1 SQAIQRIKN 9
S+ +QRIKN
Sbjct: 122 SEFLQRIKN 130




48|Sequence|236|245|RIKNDFQNLQ

>sp|EF2_NANEQ|ELONGATION factor 2|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 RIKNDFQ 7
RIKNDF+
Sbjct: 460 RIKNDFK 466


>sp|PYLS_METBF|PYRROLYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RIKNDFQNL 9
R KNDFQ L
Sbjct: 191 RRKNDFQRL 199


>sp|PYLS_METBA|PYRROLYSINE--TRNA ligase|Methanosarcina barkeri

Query: 1 RIKNDFQNL 9
R KNDFQ L
Sbjct: 191 RRKNDFQRL 199


>sp|Y1303_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ1303|Methanocaldococcus jannaschii

Query: 1 RIKNDFQNL 9
RIK DF+ L
Sbjct: 311 RIKQDFRRL 319


>sp|PYLS_METMA|PYRROLYSINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RIKNDFQNLQ 10
++K+DF+N++
Sbjct: 429 KVKHDFKNIK 438


>sp|Y1053_ARCFU|UNCHARACTERIZED protein AF_1053|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IKNDFQNLQ 10
++N FQNLQ
Sbjct: 52 LENPFQNLQ 60


>sp|EF2_PICTO|ELONGATION factor 2|Picrophilus torridus (strain ATCC 700027

Query: 1 RIKNDFQ 7
RIKND++
Sbjct: 447 RIKNDYK 453


>sp|EF2_THEVO|ELONGATION factor 2|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RIKNDFQ 7
RIKND++
Sbjct: 447 RIKNDYK 453


>sp|EF2_THEAC|ELONGATION factor 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RIKNDFQ 7
RIKND++
Sbjct: 447 RIKNDYK 453




49|Sequence|241|250|FQNLQQVFLQ

***** No hits found ******


50|Sequence|246|255|QVFLQAKKDT

>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 QVFLQAKKDT 10
++FL+A KDT
Sbjct: 68 EIFLEAMKDT 77




51|Sequence|251|260|AKKDTDWLKE

>sp|THIC1_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 AKKDTDWLK 9
A++D DW K
Sbjct: 374 ARRDLDWQK 382


>sp|THIC1_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 AKKDTDWLKE 10
A++D DW K+
Sbjct: 372 ARRDLDWEKQ 381


>sp|PORA_METBF|PYRUVATE synthase subunit PorA|Methanosarcina barkeri (strain Fusaro /

Query: 1 AKKDTDWLK 9
A++DT W++
Sbjct: 133 AQRDTGWMQ 141


>sp|GLPK2_SACS2|GLYCEROL kinase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 TDWLKE 10
TDWLKE
Sbjct: 112 TDWLKE 117


>sp|Y738_METVS|UPF0210 protein Mevan_0738|Methanococcus vannielii (strain ATCC 35089

Query: 1 AKKDTDWLKE 10
A KD D LKE
Sbjct: 34 ADKDLDLLKE 43


>sp|Y672_METM7|UPF0210 protein MmarC7_0672|Methanococcus maripaludis (strain C7 /

Query: 1 AKKDTDWLKE 10
A KD D LKE
Sbjct: 34 ADKDLDLLKE 43


>sp|Y151_METM5|UPF0210 protein MmarC5_0151|Methanococcus maripaludis (strain C5 /

Query: 1 AKKDTDWLKE 10
A KD D LKE
Sbjct: 34 ADKDLDLLKE 43


>sp|Y1427_METMP|UPF0210 protein MMP1427|Methanococcus maripaludis (strain DSM 14266

Query: 1 AKKDTDWLKE 10
A KD D LKE
Sbjct: 34 ADKDLDLLKE 43


>sp|Y1246_METM6|UPF0210 protein MmarC6_1246|Methanococcus maripaludis (strain C6 /

Query: 1 AKKDTDWLKE 10
A KD D LKE
Sbjct: 34 ADKDLDLLKE 43


>sp|THIC2_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AKKDTDWLK 9
A++D DW K
Sbjct: 374 ARRDLDWEK 382


>sp|RIBL_ARCFU|FAD synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DTDWLKE 10
D DWLKE
Sbjct: 92 DEDWLKE 98


>sp|TRUA_METBF|TRNA pseudouridine synthase A|Methanosarcina barkeri (strain Fusaro /

Query: 3 KDTDWL 8
+DTDWL
Sbjct: 195 RDTDWL 200


>sp|HIS8_SACS2|HISTIDINOL-PHOSPHATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KKDTDWLKE 10
K+D +W KE
Sbjct: 153 KEDNEWWKE 161


>sp|SYFA_METJA|PHENYLALANINE--TRNA ligase alpha subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KKDTDWLK 9
K D DWLK
Sbjct: 471 KNDLDWLK 478


>sp|THIC2_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 AKKDTDWLKE 10
A++D DW K+
Sbjct: 372 ARRDLDWEKQ 381


>sp|THIC1_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AKKDTDWLKE 10
A++D DW K+
Sbjct: 372 ARRDLDWEKQ 381


>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 AKKDTDWLKE 10
A+K+ DW K+
Sbjct: 374 ARKNHDWEKQ 383




52|Sequence|256|265|DWLKEKVQSL

>sp|Y817_ARCFU|UNCHARACTERIZED protein AF_0817|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DWLKEKVQSL 10
DW++EK++ L
Sbjct: 315 DWIREKIEKL 324


>sp|RL10_METST|LARGE ribosomal subunit protein uL10|Methanosphaera stadtmanae (strain

Query: 1 DWLKEKVQSL 10
DW KEKV L
Sbjct: 6 DWKKEKVAEL 15


>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DWLKEKV 7
DWLK+K+
Sbjct: 469 DWLKKKI 475


>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WLKEKVQ 8
W KEKV+
Sbjct: 453 WFKEKVR 459


>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DWLKEK 6
DWLKE+
Sbjct: 480 DWLKER 485


>sp|SYL_THEVO|LEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DWLKEK 6
DWLKE+
Sbjct: 480 DWLKER 485


>sp|RIBL_ARCFU|FAD synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DWLKEKVQ 8
DWLKE+++
Sbjct: 94 DWLKEELR 101


>sp|DADD_METTP|5'-DEOXYADENOSINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 WLKEKVQSL 10
WL+EK+ L
Sbjct: 77 WLQEKIWPL 85


>sp|IXTPA_PYRFU|DITP/XTP pyrophosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DWLKEKV 7
+WLK+KV
Sbjct: 51 NWLKDKV 57


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DWLKEKV 7
DW EKV
Sbjct: 438 DWFSEKV 444


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DWLKEK 6
DWLK+K
Sbjct: 488 DWLKDK 493


>sp|D89S1_ARCFU|DAMAGE-CONTROL phosphatase AF_1104|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DWLKEKVQ 8
D+LK KVQ
Sbjct: 129 DFLKRKVQ 136


>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 1 DWLKEKVQ 8
DW+ EK++
Sbjct: 251 DWIAEKLE 258


>sp|AROC_SULAC|CHORISMATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WLKEKVQSL 10
WL+EK + L
Sbjct: 188 WLEEKYEEL 196


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DWLKEK 6
DWLK+K
Sbjct: 490 DWLKDK 495


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DWLKEK 6
DWLK+K
Sbjct: 490 DWLKDK 495


>sp|PHR_HALSA|DEOXYRIBODIPYRIMIDINE photo-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DWLKEKV 7
DW +EK+
Sbjct: 372 DWFREKL 378


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DWLKEK 6
DWLK+K
Sbjct: 490 DWLKDK 495


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 DWLKEKVQS 9
DW K+K+ S
Sbjct: 773 DWKKKKIIS 781


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DWLKEK 6
DWLK+K
Sbjct: 490 DWLKDK 495


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 DWLKEKVQS 9
DW K+K+ S
Sbjct: 777 DWKKKKIIS 785


>sp|PFDB_THEON|PREFOLDIN subunit beta|Thermococcus onnurineus (strain NA1)

Query: 1 DWLKEKVQSL 10
+ LKEKV++L
Sbjct: 73 EELKEKVETL 82


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 DWLKEKVQS 9
DW K+K+ S
Sbjct: 776 DWKKKKIIS 784


>sp|PFDB_THEGJ|PREFOLDIN subunit beta|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DWLKEKVQSL 10
+ LKEKV++L
Sbjct: 73 EELKEKVETL 82


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 DWLKEKVQS 9
DW K+K+ S
Sbjct: 776 DWKKKKIIS 784




53|Sequence|261|270|KVQSLQTLAA

***** No hits found ******


54|Sequence|266|275|QTLAANNSAL

***** No hits found ******


55|Sequence|271|280|NNSALAKANN

***** No hits found ******


56|Sequence|276|285|AKANNDTLED

>sp|SYP_NANEQ|PROLINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 KANNDTLED 10
+A ND LED
Sbjct: 91 RAGNDKLED 99




57|Sequence|281|290|DTLEDMNSQL

>sp|SRP54_METBU|SIGNAL recognition particle 54 kDa|Methanococcoides burtonii (strain DSM

Query: 2 TLEDMNSQL 10
TL+DM SQL
Sbjct: 321 TLKDMYSQL 329




58|Sequence|286|295|MNSQLNSFTG

***** No hits found ******


59|Sequence|291|300|NSFTGQMENI

>sp|THSB_SULTO|CHAPERONIN subunit beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NSFTGQMENI 10
N FTGQ+E++
Sbjct: 488 NVFTGQVEDM 497


>sp|THS_METTL|CHAPERONIN subunit|Methanothermococcus thermolithotrophicus

Query: 1 NSFTGQMENI 10
N FTG +EN+
Sbjct: 476 NVFTGDVENM 485


>sp|NEP1_PYRHO|RIBOSOMAL RNA small subunit methyltransferase|Pyrococcus horikoshii (strain

Query: 1 NSFTGQMENI 10
N F G MEN+
Sbjct: 112 NRFIGLMENL 121


>sp|SYH_THEAC|HISTIDINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NSFTGQMENI 10
N +TG EN+
Sbjct: 403 NMYTGSQENV 412


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 NSFTGQMENI 10
NSF ++ENI
Sbjct: 246 NSFICELENI 255




60|Sequence|296|305|QMENITTISQ

>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 1 QMENITTIS 9
QMENI T+S
Sbjct: 56 QMENIMTLS 64


>sp|LYSJ_SACS2|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Saccharolobus

Query: 1 QMENITTIS 9
QME I+T+S
Sbjct: 57 QMEEISTLS 65




61|Sequence|301|310|TTISQANEQN

***** No hits found ******


62|Sequence|306|315|ANEQNLKDLQ

>sp|DNAG_METM5|DNA primase DnaG|Methanococcus maripaludis (strain C5 /

Query: 1 ANEQNLKDLQ 10
+NE +L+DLQ
Sbjct: 38 SNELDLRDLQ 47


>sp|DNAG_METM6|DNA primase DnaG|Methanococcus maripaludis (strain C6 /

Query: 1 ANEQNLKDLQ 10
+NE +L+DLQ
Sbjct: 38 SNELDLRDLQ 47


>sp|DNAG_METMP|DNA primase DnaG|Methanococcus maripaludis (strain DSM 14266

Query: 1 ANEQNLKDLQ 10
+NE +L+DLQ
Sbjct: 38 SNELDLRDLQ 47


>sp|DNAG_METM7|DNA primase DnaG|Methanococcus maripaludis (strain C7 /

Query: 1 ANEQNLKDLQ 10
+NE +L+DLQ
Sbjct: 38 SNELDLRDLQ 47


>sp|BIOB_NITMS|BIOTIN synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 EQNLKDL 9
E+NLKDL
Sbjct: 33 EENLKDL 39


>sp|PROA_METMA|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 EQNLKDLQ 10
E NLKDL+
Sbjct: 47 EANLKDLE 54


>sp|Y1487_METJA|UNCHARACTERIZED methyltransferase MJ1487|Methanocaldococcus jannaschii (strain ATCC

Query: 3 EQNLKDLQ 10
E+NLKD++
Sbjct: 217 ERNLKDIR 224




63|Sequence|311|320|LKDLQDLHKD

>sp|GUAAB_METAR|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocella arvoryzae

Query: 1 LKDLQDLHKD 10
++ LQDL+KD
Sbjct: 157 IEPLQDLYKD 166


>sp|Y771_ARCFU|UNCHARACTERIZED protein AF_0771|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LKDLQDLHKD 10
LKDL+D+ D
Sbjct: 183 LKDLKDISAD 192


>sp|DGGGP_METKA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 LKDLQDLHKD 10
LKDL+D+ D
Sbjct: 169 LKDLEDVEGD 178


>sp|NADM_METHJ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 LQDLHK 9
LQDLHK
Sbjct: 61 LQDLHK 66


>sp|DNLI2_THEPD|DNA ligase 2|Thermofilum pendens (strain DSM 2475

Query: 1 LKDLQDLHK 9
LKD++DL+K
Sbjct: 83 LKDVEDLYK 91


>sp|GUAAB_METPE|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosphaerula

Query: 1 LKDLQDLHKD 10
L+ L+DL+KD
Sbjct: 157 LEPLRDLYKD 166


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LKDLQDLHK 9
L D +DLHK
Sbjct: 25 LWDAEDLHK 33


>sp|THYX_PYRAE|FLAVIN-DEPENDENT thymidylate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KDLQDLHKD 10
+DL LH+D
Sbjct: 198 EDLPSLHRD 206


>sp|DGGGP_HALWD|DIGERANYLGERANYLGLYCERYL phosphate synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LKDLQDLHKD 10
+KD++DL D
Sbjct: 181 IKDIEDLDGD 190


>sp|SYFA_METJA|PHENYLALANINE--TRNA ligase alpha subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LKDLQDLHKD 10
L D++DLHK+
Sbjct: 463 LTDIRDLHKN 472


>sp|SYFA_METLZ|PHENYLALANINE--TRNA ligase alpha subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 LKDLQDLHK 9
LKDL+ L+K
Sbjct: 452 LKDLRQLYK 460


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 LQDLHKD 10
L+DLHK+
Sbjct: 1132 LEDLHKE 1138


>sp|GUAAB_THEKO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermococcus

Query: 1 LKDLQDLHKD 10
++ L+DL+KD
Sbjct: 157 IEPLRDLYKD 166


>sp|GUAAB_PYRHO|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus horikoshii

Query: 1 LKDLQDLHKD 10
++ L+DL+KD
Sbjct: 158 IEPLRDLYKD 167


>sp|GUAAB_PYRFU|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus furiosus

Query: 1 LKDLQDLHKD 10
++ L+DL+KD
Sbjct: 163 IEPLRDLYKD 172


>sp|GUAAB_PYRAB|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus abyssi

Query: 1 LKDLQDLHKD 10
++ L+DL+KD
Sbjct: 158 IEPLRDLYKD 167


>sp|Y1565_METJA|PROBABLE helicase MJ1565|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKDLQDLHKD 10
L D++DL+KD
Sbjct: 86 LGDIRDLNKD 95




64|Sequence|316|325|DLHKDAENRT

>sp|NAR7_HALMT|PUTATIVE respiratory nitrate reductase heme|Haloferax mediterranei (strain

Query: 1 DLHKDAENRT 10
+L+ DAENRT
Sbjct: 193 ELNSDAENRT 202


>sp|THIC_PYRAE|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LHKDAEN 8
LH DAEN
Sbjct: 197 LHNDAEN 203


>sp|RAD50_THEAC|DNA double-strand break repair Rad50|Thermoplasma acidophilum (strain

Query: 4 KDAENRT 10
KDAE+RT
Sbjct: 598 KDAEDRT 604




65|Sequence|321|330|AENRTAIKFN

>sp|RAD50_METJA|DNA double-strand break repair Rad50|Methanocaldococcus jannaschii

Query: 2 ENRTAIKFN 10
ENR ++KF+
Sbjct: 694 ENRRSLKFD 702


>sp|RS24_METST|SMALL ribosomal subunit protein eS24|Methanosphaera stadtmanae (strain

Query: 3 NRTAIKF 9
NRT IKF
Sbjct: 15 NRTEIKF 21




66|Sequence|326|335|AIKFNQLEER

>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 4 FNQLEER 10
FN+LEER
Sbjct: 277 FNELEER 283


>sp|HEM1_METJA|GLUTAMYL-TRNA reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AIKFNQLEE 9
AIKF++LEE
Sbjct: 206 AIKFDKLEE 214


>sp|Y417_METJA|UNCHARACTERIZED protein MJ0417|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KFNQLEER 10
KFN LEER
Sbjct: 105 KFNVLEER 112


>sp|RBLL_ARCFU|RIBULOSE bisphosphate carboxylase-like protein|Archaeoglobus fulgidus

Query: 3 KFNQLEER 10
+FN++EER
Sbjct: 211 EFNRIEER 218


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 4 FNQLEER 10
FN+LEE+
Sbjct: 273 FNELEEK 279


>sp|PORA_PYRAB|PYRUVATE synthase subunit PorA|Pyrococcus abyssi (strain GE5 /

Query: 2 IKFNQLEE 9
+ FNQL+E
Sbjct: 360 VTFNQLDE 367


>sp|PORA_PYRFU|PYRUVATE synthase subunit PorA|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IKFNQLEE 9
+ FNQL+E
Sbjct: 360 VTFNQLDE 367


>sp|Y2294_THEKO|UPF0128 protein TK2294|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 KFNQLEE 9
KFNQLE+
Sbjct: 122 KFNQLEK 128


>sp|Y3516_METJA|UNCHARACTERIZED protein MJECL16|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KFNQLEER 10
KFNQL+++
Sbjct: 38 KFNQLDKK 45


>sp|HJE_SACS2|CROSSOVER junction endodeoxyribonuclease Hje|Saccharolobus solfataricus

Query: 1 AIKFNQLEE 9
AIKF Q+ E
Sbjct: 87 AIKFKQVHE 95




67|Sequence|331|340|QLEERFQLFE

>sp|GFO6_HALMA|D-XYLOSE 1-dehydrogenase [NADP(+)]|Haloarcula marismortui (strain ATCC 43049

Query: 1 QLEERFQLF 9
Q+EE F+ F
Sbjct: 312 QMEEEFEYF 320


>sp|RS3_HALSA|SMALL ribosomal subunit protein uS3|Halobacterium salinarum (strain

Query: 1 QLEERFQL 8
QLEERF L
Sbjct: 68 QLEERFDL 75




68|Sequence|336|345|FQLFETDIVN

>sp|PURP_SACS2|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Saccharolobus solfataricus (strain ATCC

Query: 1 FQLFETDIVN 10
FQ F +DI+N
Sbjct: 185 FQFFYSDIIN 194


>sp|PSA_METPE|PROTEASOME subunit alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 FQLFETD 7
F+LFETD
Sbjct: 147 FRLFETD 153


>sp|COBQ_METBF|PROBABLE cobyric acid synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 LFETDIVN 10
L+E DIVN
Sbjct: 142 LYERDIVN 149


>sp|COBQ_METMA|PROBABLE cobyric acid synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LFETDIVN 10
L+E DIVN
Sbjct: 142 LYERDIVN 149


>sp|COBQ_METAC|PROBABLE cobyric acid synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LFETDIVN 10
L+E D+VN
Sbjct: 142 LYERDVVN 149


>sp|GCSPA_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 2 QLFETDIVN 10
+LFE ++VN
Sbjct: 125 ELFEMEVVN 133




69|Sequence|341|350|TDIVNIISNI

>sp|HTR1_HALMA|SENSORY rhodopsin I transducer|Haloarcula marismortui (strain ATCC 43049

Query: 1 TDIVNIISNI 10
TDI +IIS I
Sbjct: 317 TDIADIISEI 326


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DIVNIISN 9
DI+NII N
Sbjct: 332 DILNIIKN 339


>sp|DNLI_NANEQ|DNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 DIVNIISN 9
D+VNI+ N
Sbjct: 279 DVVNIVRN 286


>sp|PGK1_METAC|PHOSPHOGLYCERATE kinase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DIVNIISNI 10
DIV +IS+I
Sbjct: 211 DIVKVISDI 219


>sp|Y132_PYRHO|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus horikoshii (strain

Query: 2 DIVNIISNI 10
D++N+I N+
Sbjct: 172 DLINVIKNL 180


>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 TDIVNIISNI 10
TDIVNI I
Sbjct: 70 TDIVNIPEEI 79


>sp|RIFK_THEVO|RIBOFLAVIN kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 TDIVNIISN 9
TD+V IIS+
Sbjct: 191 TDVVEIISD 199




70|Sequence|346|355|IISNISYTAH

>sp|NRPR1_METMA|GLOBAL nitrogen regulator NrpRI|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IISNISYTAH 10
+I ISYTAH
Sbjct: 125 VIELISYTAH 134


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 IISNISYTAH 10
IIS++ Y AH
Sbjct: 155 IISSVMYAAH 164


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 ISNISYTA 9
+SNISY+A
Sbjct: 8354 VSNISYSA 8361


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IISNISYT 8
+ISNI YT
Sbjct: 1029 LISNIVYT 1036


>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 ISNISYTA 9
+SNI+Y+A
Sbjct: 396 VSNIAYSA 403


>sp|ARGC_METAC|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ISNISYTAH 10
+ NIS+T H
Sbjct: 218 LRNISFTPH 226


>sp|ARGC_METMA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ISNISYTAH 10
+ NIS+T H
Sbjct: 222 LRNISFTPH 230




71|Sequence|351|360|SYTAHHLRTL

>sp|TRM1_META3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus aeolicus

Query: 2 YTAHHLRTL 10
+TAH++RT
Sbjct: 217 FTAHYVRTF 225


>sp|RL15_THEVO|LARGE ribosomal subunit protein uL15|Thermoplasma volcanium (strain

Query: 2 YTAHHLRT 9
+T+HHL T
Sbjct: 56 FTSHHLST 63


>sp|DPDH_PYRIL|D-PROLINE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 YTAHHLR 8
+TA+HLR
Sbjct: 14 FTAYHLR 20


>sp|HPRL_HALBP|HGPRTASE-LIKE protein|Halogeometricum borinquense (strain ATCC 700274

Query: 3 TAHHLRTL 10
T HH++TL
Sbjct: 162 TDHHVKTL 169


>sp|VHUA_METJA|F420-NON-REDUCING hydrogenase vhu subunit A|Methanocaldococcus jannaschii (strain

Query: 3 TAHHLRTL 10
TAHHL ++
Sbjct: 66 TAHHLASV 73


>sp|VHUA_METVO|F420-NON-REDUCING hydrogenase vhu subunit A|Methanococcus voltae

Query: 3 TAHHLRTL 10
TAHHL ++
Sbjct: 66 TAHHLASV 73


>sp|Y967_METTH|PUTATIVE HTH-type transcriptional regulatory protein|Methanothermobacter

Query: 1 SYTAHHLRTL 10
S AH +RTL
Sbjct: 58 SLQAHEIRTL 67


>sp|RGYRA_METKA|REVERSE gyrase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 1 SYTAHHLR 8
+ T+HHLR
Sbjct: 151 TLTSHHLR 158


>sp|DTDA_STAMF|D-AMINOACYL-TRNA deacylase|Staphylothermus marinus (strain ATCC 43588

Query: 1 SYTAHH 6
SYT HH
Sbjct: 86 SYTVHH 91


>sp|RS27A_IGNH4|SMALL ribosomal subunit protein eS31|Ignicoccus hospitalis (strain

Query: 1 SYTAHHLR 8
S+ AHHL+
Sbjct: 34 SFMAHHLK 41


>sp|TIAS_HALWD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Haloquadratum walsbyi (strain

Query: 5 HHLRT 9
HHLRT
Sbjct: 318 HHLRT 322


>sp|CAS3_METJA|PUTATIVE CRISPR-associated nuclease/helicase Cas3|Methanocaldococcus

Query: 2 YTAHHLRTL 10
YT HL TL
Sbjct: 360 YTLEHLLTL 368




72|Sequence|356|365|HLRTLTSNLN

>sp|Y1398_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1398|Methanocaldococcus

Query: 1 HLRTLTSNLN 10
HLR L+ NLN
Sbjct: 269 HLRELSKNLN 278


>sp|PURQ_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanocaldococcus jannaschii (strain ATCC

Query: 4 TLTSNLN 10
TLT+NLN
Sbjct: 100 TLTNNLN 106


>sp|TIAS_HALWD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Haloquadratum walsbyi (strain

Query: 1 HLRTLTSN 8
HLRT +SN
Sbjct: 319 HLRTKSSN 326


>sp|RPO1C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Archaeoglobus fulgidus (strain ATCC

Query: 1 HLRTLTSNL 9
HLR +T N+
Sbjct: 349 HLRGITENI 357


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 2 LRTLTSNLN 10
+T+T NLN
Sbjct: 889 FKTITDNLN 897


>sp|GATB_METB6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanoregula boonei (strain DSM 21154

Query: 1 HLRTLTSNL 9
H RTLT L
Sbjct: 311 HARTLTGEL 319




73|Sequence|361|370|TSNLNEVRTT

>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TSNLNEVRT 9
TSN N++RT
Sbjct: 1101 TSNPNDIRT 1109


>sp|IDI2_METBU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcoides burtonii (strain DSM 6242

Query: 3 NLNEVRTT 10
N+NE+RT+
Sbjct: 326 NINELRTS 333


>sp|RFCL_SULTO|REPLICATION factor C large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TSNLNEVRT 9
+ NLN++RT
Sbjct: 77 SRNLNDIRT 85


>sp|COBD_THEAC|PROBABLE cobalamin biosynthesis protein CobD|Thermoplasma acidophilum

Query: 1 TSNLNE 6
TSNLNE
Sbjct: 126 TSNLNE 131


>sp|TAL_THEAC|PROBABLE transaldolase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TSNLNEVRT 9
T+N++E+RT
Sbjct: 7 TANIDEIRT 15




74|Sequence|366|375|EVRTTCTDTL

>sp|TRUB_THEVO|PROBABLE tRNA pseudouridine synthase B|Thermoplasma volcanium (strain ATCC

Query: 2 VRTTCTD 8
+RT CTD
Sbjct: 143 IRTLCTD 149


>sp|PURP_METAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanocella arvoryzae (strain DSM

Query: 2 VRTTCTDTL 10
++T CTD L
Sbjct: 300 IQTMCTDNL 308


>sp|TRUB_PICTO|PROBABLE tRNA pseudouridine synthase B|Picrophilus torridus (strain ATCC

Query: 2 VRTTCTD 8
+RT CTD
Sbjct: 139 IRTLCTD 145


>sp|TRUB_THEAC|PROBABLE tRNA pseudouridine synthase B|Thermoplasma acidophilum (strain ATCC

Query: 2 VRTTCTD 8
+RT CTD
Sbjct: 141 IRTLCTD 147


>sp|G1PDH_METBU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcoides burtonii (strain DSM

Query: 1 EVRTTCTD 8
EVR CTD
Sbjct: 29 EVRDVCTD 36


>sp|GLNA1_METMA|GLUTAMINE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VRTTCTDTL 10
+RT TDTL
Sbjct: 25 IRTQFTDTL 33


>sp|PURP_METTH|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothermobacter thermautotrophicus

Query: 2 VRTTCTDTL 10
++T CTD L
Sbjct: 298 LQTMCTDNL 306


>sp|COOS2_METAC|CARBON monoxide dehydrogenase 2|Methanosarcina acetivorans (strain ATCC

Query: 5 TCTDT 9
TCTDT
Sbjct: 524 TCTDT 528


>sp|COOS2_METMA|CARBON monoxide dehydrogenase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 TCTDT 9
TCTDT
Sbjct: 524 TCTDT 528


>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 TCTDT 9
TCTDT
Sbjct: 513 TCTDT 517




75|Sequence|371|380|CTDTLTKHTD

>sp|RADA_HALWD|DNA repair and recombination protein|Haloquadratum walsbyi (strain DSM

Query: 1 CTDTLTKH 8
C D+LT H
Sbjct: 229 CVDSLTAH 236


>sp|COFC_METS3|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 TDTLTKHTD 10
TDTL K+TD
Sbjct: 41 TDTLRKYTD 49


>sp|RADA_HALVD|DNA repair and recombination protein|Haloferax volcanii (strain ATCC

Query: 1 CTDTLTKH 8
C D+LT H
Sbjct: 229 CVDSLTAH 236


>sp|NADK_THEVO|NAD kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 CTDTLTKHTD 10
CT+ HTD
Sbjct: 127 CTNEAVVHTD 136




76|Sequence|376|385|TKHTDDLTSL

>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 KHTDDL 7
KHTDD+
Sbjct: 410 KHTDDV 415


>sp|CSD_AERPE|PROBABLE cysteine desulfurase|Aeropyrum pernix (strain ATCC 700893

Query: 2 KHTDDLTS 9
+H D+LTS
Sbjct: 302 RHEDELTS 309


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 1 TKHTDDLT 8
TKH DD++
Sbjct: 695 TKHADDMS 702


>sp|LEU1_PYRFU|2-ISOPROPYLMALATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TKHTDDL 7
TK+TDD+
Sbjct: 130 TKYTDDI 136


>sp|GLYA_SACI6|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4

Query: 1 TKHTDDLTSL 10
TK+TD++ +L
Sbjct: 64 TKYTDEIETL 73


>sp|GLYA_SACI4|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25

Query: 1 TKHTDDLTSL 10
TK+TD++ +L
Sbjct: 64 TKYTDEIETL 73


>sp|PUR5_METBU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 KHTDDLTS 9
KH+DD S
Sbjct: 110 KHSDDFAS 117


>sp|GLYA_SACI2|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 1 TKHTDDLTSL 10
TK+TD++ +L
Sbjct: 64 TKYTDEIETL 73


>sp|GLYA_SACS2|SERINE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 TKHTDDLTSL 10
TK+TD++ +L
Sbjct: 64 TKYTDEIETL 73


>sp|GLYA_SACI7|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 1 TKHTDDLTSL 10
TK+TD++ +L
Sbjct: 64 TKYTDEIETL 73


>sp|GLYA_SACI3|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 1 TKHTDDLTSL 10
TK+TD++ +L
Sbjct: 64 TKYTDEIETL 73


>sp|GLYA_SACI1|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 1 TKHTDDLTSL 10
TK+TD++ +L
Sbjct: 64 TKYTDEIETL 73




77|Sequence|381|390|DLTSLNNTLA

>sp|SYN_PYRHO|ASPARAGINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DLTSLNNT 8
DLT+L NT
Sbjct: 268 DLTTLKNT 275


>sp|SYN_PYRFU|ASPARAGINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DLTSLNNT 8
DLT+L NT
Sbjct: 268 DLTTLKNT 275


>sp|SYN_PYRAB|ASPARAGINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 DLTSLNNT 8
DLT+L NT
Sbjct: 268 DLTTLKNT 275


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LTSLNNTLA 10
LTS +NT+A
Sbjct: 832 LTSTDNTIA 840


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 LTSLNNTLA 10
LTS +NT+A
Sbjct: 832 LTSTDNTIA 840


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LTSLNNTLA 10
LTS +NT+A
Sbjct: 832 LTSTDNTIA 840


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LTSLNNTLA 10
LTS +NT+A
Sbjct: 832 LTSTDNTIA 840


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LTSLNNTLA 10
LTS +NT+A
Sbjct: 832 LTSTDNTIA 840


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LTSLNNTLA 10
LTS +NT+A
Sbjct: 832 LTSTDNTIA 840


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LTSLNNTLA 10
LTS +NT+A
Sbjct: 832 LTSTDNTIA 840


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 LTSLNNTLA 10
LTSLNN A
Sbjct: 3603 LTSLNNATA 3611




78|Sequence|386|395|NNTLANIRLD

>sp|Y2171_ARCFU|UNCHARACTERIZED protein AF_2171|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NNTLANIRLD 10
N TL N R+D
Sbjct: 108 NETLTNYRMD 117


>sp|Y1211_METTH|PUTATIVE transport protein MTH_1211|Methanothermobacter thermautotrophicus

Query: 2 NTLANIR 8
NTLAN+R
Sbjct: 112 NTLANLR 118


>sp|SYC_PYRHO|CYSTEINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NTLANIRL 9
NTL NIR+
Sbjct: 321 NTLENIRI 328


>sp|SYC_PYRAB|CYSTEINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 NTLANIRL 9
NTL NIR+
Sbjct: 321 NTLENIRI 328


>sp|SYC_THEON|CYSTEINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 NTLANIRL 9
NTL NIR+
Sbjct: 321 NTLENIRV 328


>sp|SYC_THEKO|CYSTEINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 NTLANIRL 9
NTL NIR+
Sbjct: 321 NTLENIRV 328


>sp|SYC_THEGJ|CYSTEINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 NTLANIRL 9
NTL NIR+
Sbjct: 321 NTLENIRV 328


>sp|SYC_PYRFU|CYSTEINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NTLANIRL 9
NTL NIR+
Sbjct: 320 NTLENIRV 327




79|Sequence|391|400|NIRLDSVSLR

>sp|RIFK_METMJ|RIBOFLAVIN kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 NIRLDSVSL 9
NIRLD+ S+
Sbjct: 133 NIRLDAASI 141


>sp|RL3_THEVO|LARGE ribosomal subunit protein uL3|Thermoplasma volcanium (strain ATCC

Query: 1 NIRLDSVSL 9
N++LD +SL
Sbjct: 317 NVKLDYISL 325




80|Sequence|396|405|SVSLRMQQDL

>sp|APE2_AERPE|HOMING endonuclease I-ApeII|Aeropyrum pernix (strain ATCC 700893

Query: 1 SVSLRMQQDL 10
SVS+++Q+DL
Sbjct: 21 SVSIKIQEDL 30


>sp|OGG1_THEAC|8-OXOGUANINE DNA glycosylase/AP lyase|Thermoplasma acidophilum (strain ATCC

Query: 1 SVSLRMQQDL 10
S+SLRMQ+ +
Sbjct: 53 SMSLRMQESI 62


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 SLRMQQDL 10
S+RM QDL
Sbjct: 371 SIRMMQDL 378




81|Sequence|401|410|MQQDLMRSRL

***** No hits found ******


82|Sequence|406|415|MRSRLDTEVA

>sp|NDK_HALWD|NUCLEOSIDE diphosphate kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 SRLDTEVA 10
+RLDTEVA
Sbjct: 45 TRLDTEVA 52


>sp|HEM3_METBU|PROBABLE porphobilinogen deaminase|Methanococcoides burtonii (strain DSM

Query: 2 RSRLDTEV 9
RSR++TEV
Sbjct: 214 RSRMETEV 221




83|Sequence|411|420|DTEVANLSVI

>sp|IF6_METMJ|TRANSLATION initiation factor 6|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DTEVANLSVI 10
DTE+ANL I
Sbjct: 161 DTEIANLERI 170


>sp|COBQ_METKA|PROBABLE cobyric acid synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 DTEVANLSV 9
DT++ANL V
Sbjct: 144 DTDIANLRV 152




84|Sequence|416|425|NLSVIMEEMK

***** No hits found ******


85|Sequence|421|430|MEEMKLVDSK

>sp|PYRDB_METTH|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanothermobacter

Query: 2 EEMKLVDSK 10
EE+KLVD +
Sbjct: 84 EELKLVDEE 92


>sp|RNH2_THEKO|RIBONUCLEASE HII|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 MEEMKLVDSK 10
+EE+K+ DSK
Sbjct: 33 LEELKVRDSK 42




86|Sequence|426|435|LVDSKHGQLI

>sp|ASSY_METJA|ARGININOSUCCINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LVDSKHGQLI 10
+VDS +G+LI
Sbjct: 299 IVDSLYGELI 308


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LVDSKH 6
LVDSKH
Sbjct: 1010 LVDSKH 1015


>sp|ASSY_METVA|ARGININOSUCCINATE synthase|Methanococcus vannielii

Query: 1 LVDSKHGQLI 10
+VDSK+ LI
Sbjct: 302 MVDSKYADLI 311


>sp|Y817_ARCFU|UNCHARACTERIZED protein AF_0817|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LVDSKHG 7
L+DS+HG
Sbjct: 549 LLDSQHG 555


>sp|ASSTI_METAC|L-ASPARTATE semialdehyde sulfurtransferase iron-sulfur subunit|Methanosarcina

Query: 2 VDSKHGQLI 10
+DS +G+LI
Sbjct: 37 IDSTYGELI 45


>sp|ASSY_METMP|ARGININOSUCCINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LVDSKHGQLI 10
+VDSK+ L+
Sbjct: 302 MVDSKYADLV 311


>sp|PGK_METS5|PHOSPHOGLYCERATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 2 VDSKHGQLI 10
VDSK G+L+
Sbjct: 26 VDSKTGKLL 34


>sp|IF5A_THESM|TRANSLATION initiation factor 5A|Thermococcus sibiricus (strain DSM 12597

Query: 1 LVDSKHGQLI 10
++D K GQ+I
Sbjct: 70 IIDKKTGQII 79


>sp|MOAA_ARCFU|PROBABLE GTP 3',8-cyclase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VDSKHGQ 8
+D KHG+
Sbjct: 271 IDGKHGE 277


>sp|ATGT_SULAC|TRNA-GUANINE(15) transglycosylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LVDSKHGQL 9
++++KHG+L
Sbjct: 18 ILETKHGKL 26




87|Sequence|431|440|HGQLIKNFTI

>sp|PMDHL_METJA|PHOSPHOMEVALONATE dehydratase large subunit|Methanocaldococcus jannaschii (strain

Query: 2 GQLIKNF 8
GQLI NF
Sbjct: 191 GQLISNF 197


>sp|RS17_SULAC|SMALL ribosomal subunit protein uS17|Sulfolobus acidocaldarius (strain

Query: 2 GQLIKNFTI 10
GQL+KN I
Sbjct: 5 GQLVKNVGI 13


>sp|Y1254_METJA|UNCHARACTERIZED protein MJ1254|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QLIKNFTI 10
Q I+NFTI
Sbjct: 102 QTIRNFTI 109




88|Sequence|436|445|KNFTILQGPP

>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 FTILQGPP 10
FT L+GPP
Sbjct: 43 FTFLEGPP 50


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KNFTILQGPP 10
K F L+GPP
Sbjct: 42 KKFVFLEGPP 51


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KNFTILQGPP 10
K F L+GPP
Sbjct: 42 KKFVFLEGPP 51


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KNFTILQGPP 10
K F + GPP
Sbjct: 36 KKFLFIDGPP 45


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KNFTILQGPP 10
K F + GPP
Sbjct: 36 KKFLFIDGPP 45


>sp|RL14E_METKA|LARGE ribosomal subunit protein eL14|Methanopyrus kandleri (strain AV19

Query: 1 KNFTILQGP 9
+NF I+ GP
Sbjct: 31 ENFVIITGP 39


>sp|TRMY_PYRFU|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus furiosus

Query: 3 FTILQGPP 10
+T+L GPP
Sbjct: 53 YTVLYGPP 60


>sp|G1PDH_METST|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosphaera stadtmanae (strain ATCC

Query: 1 KNFTILQGP 9
K+ TIL GP
Sbjct: 33 KDVTILTGP 41


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KNFTILQGPP 10
K F + GPP
Sbjct: 39 KKFYFVDGPP 48


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KNFTILQGPP 10
K F + GPP
Sbjct: 37 KEFYFVDGPP 46


>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KNFTILQGPP 10
+N+TI Q PP
Sbjct: 90 QNWTISQFPP 99


>sp|TRUB_METKA|PROBABLE tRNA pseudouridine synthase B|Methanopyrus kandleri (strain AV19 /

Query: 4 TILQGPP 10
TILQ PP
Sbjct: 133 TILQRPP 139


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KNFTILQGPP 10
K F + GPP
Sbjct: 39 KRFFFVDGPP 48


>sp|Y994_METTH|PUTATIVE aminohydrolase MTH_994|Methanothermobacter thermautotrophicus

Query: 1 KNFTILQGP 9
+N TIL+GP
Sbjct: 7 ENGTILRGP 15


>sp|DGGGP_METS3|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KNFTILQGP 9
K F IL GP
Sbjct: 191 KTFPILYGP 199


>sp|Y2322_SULTO|UPF0282 protein STK_23220|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NFTILQGP 9
NF I+ GP
Sbjct: 195 NFIIIDGP 202




89|Sequence|441|450|LQGPPGPRGP

>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LQGPPGPRGP 10
+ GPP P P
Sbjct: 41 IDGPPYPSSP 50


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LQGPPGPRGP 10
+ GPP P P
Sbjct: 41 IDGPPYPSSP 50


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LQGPPGPRGP 10
+ GPP P P
Sbjct: 44 IDGPPYPSSP 53


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 LQGPPGPRGP 10
+ GPP P P
Sbjct: 44 IDGPPYPSSP 53


>sp|DNAK_METAR|CHAPERONE protein DnaK|Methanocella arvoryzae (strain DSM 22066

Query: 4 PPGPRG 9
PP PRG
Sbjct: 434 PPAPRG 439


>sp|DNAK_METTP|CHAPERONE protein DnaK|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 PPGPRG 9
PP PRG
Sbjct: 438 PPAPRG 443


>sp|Y1232_METJA|UNCHARACTERIZED protein MJ1232|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LQGPPGPRG 9
+ G PGP+G
Sbjct: 54 VDGVPGPKG 62


>sp|RS3A_AERPE|SMALL ribosomal subunit protein eS1|Aeropyrum pernix (strain ATCC 700893

Query: 5 PGPRGP 10
PGP GP
Sbjct: 195 PGPNGP 200


>sp|DNAK_METBU|CHAPERONE protein DnaK|Methanococcoides burtonii (strain DSM 6242

Query: 4 PPGPRG 9
PP PRG
Sbjct: 437 PPAPRG 442


>sp|DNAK_METMZ|CHAPERONE protein DnaK|Methanosarcina mazei (Methanosarcina frisia)

Query: 4 PPGPRG 9
PP PRG
Sbjct: 437 PPAPRG 442


>sp|DNAK_METMA|CHAPERONE protein DnaK|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PPGPRG 9
PP PRG
Sbjct: 437 PPAPRG 442


>sp|DNAK_PICTO|CHAPERONE protein DnaK|Picrophilus torridus (strain ATCC 700027

Query: 4 PPGPRG 9
PP PRG
Sbjct: 439 PPAPRG 444


>sp|DNAK_METAC|CHAPERONE protein DnaK|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 PPGPRG 9
PP PRG
Sbjct: 437 PPAPRG 442


>sp|DNAK_NITMS|CHAPERONE protein DnaK|Nitrosopumilus maritimus (strain SCM1)

Query: 4 PPGPRG 9
PP PRG
Sbjct: 441 PPAPRG 446


>sp|DNAK_METBF|CHAPERONE protein DnaK|Methanosarcina barkeri (strain Fusaro /

Query: 4 PPGPRG 9
PP PRG
Sbjct: 437 PPAPRG 442


>sp|PURP_METTH|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothermobacter thermautotrophicus

Query: 4 PPGPRGP 10
PPG GP
Sbjct: 289 PPGMNGP 295


>sp|DNAK_METTH|CHAPERONE protein DnaK|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 PPGPRG 9
PP PRG
Sbjct: 442 PPAPRG 447


>sp|RFCL_SACS2|REPLICATION factor C large subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 LQGPPG 6
L GPPG
Sbjct: 45 LHGPPG 50


>sp|RFCL_SACI7|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 LQGPPG 6
L GPPG
Sbjct: 45 LHGPPG 50


>sp|RFCL_SACI6|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LQGPPG 6
L GPPG
Sbjct: 45 LHGPPG 50


>sp|RFCL_SACI4|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LQGPPG 6
L GPPG
Sbjct: 45 LHGPPG 50


>sp|RFCL_SACI3|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.27)

Query: 1 LQGPPG 6
L GPPG
Sbjct: 45 LHGPPG 50


>sp|RFCL_SACI2|REPLICATION factor C large subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 1 LQGPPG 6
L GPPG
Sbjct: 45 LHGPPG 50


>sp|RFCL_SACI1|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 LQGPPG 6
L GPPG
Sbjct: 45 LHGPPG 50


>sp|DNAK_METTE|CHAPERONE protein DnaK|Methanosarcina thermophila

Query: 4 PPGPRG 9
PP PRG
Sbjct: 437 PPAPRG 442


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 LQGPPG 6
L GPPG
Sbjct: 187 LHGPPG 192


>sp|TRMY_METM5|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 1 LQGPPGP 7
L GPP P
Sbjct: 56 LYGPPNP 62


>sp|Y520_METJA|PUTATIVE NADH-ubiquinone oxidoreductase MJ0520|Methanocaldococcus

Query: 1 LQGPPGP 7
+QG PGP
Sbjct: 36 IQGRPGP 42


>sp|ADH_SACS2|NAD-DEPENDENT alcohol dehydrogenase|Saccharolobus solfataricus (strain ATCC

Query: 3 GPPGPRGP 10
G P P+GP
Sbjct: 19 GVPKPKGP 26


>sp|RNZ_HALVD|RIBONUCLEASE Z|Haloferax volcanii (strain ATCC 29605

Query: 1 LQGPPGPRG 9
+ GPPG +G
Sbjct: 88 IHGPPGSKG 96


>sp|IPYR_PICTO|INORGANIC pyrophosphatase|Picrophilus torridus (strain ATCC 700027

Query: 2 QGPPGPRGP 10
Q PPGP P
Sbjct: 10 QVPPGPNPP 18


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LQGPPG 6
L GPPG
Sbjct: 192 LHGPPG 197


>sp|DNAK_CENSY|CHAPERONE protein DnaK|Cenarchaeum symbiosum (strain A)

Query: 4 PPGPRG 9
PP PRG
Sbjct: 440 PPAPRG 445


>sp|HAH4_HALMT|HALOCIN-H4 mediterranei (strain ATCC 33500

Query: 3 GPPGPRG 9
PPGP G
Sbjct: 49 APPGPNG 55


>sp|RS5_THEKO|SMALL ribosomal subunit protein uS5|Thermococcus kodakarensis (strain

Query: 5 PGPRG 9
PGPRG
Sbjct: 157 PGPRG 161


>sp|RL10E_THESM|LARGE ribosomal subunit protein uL16|Thermococcus sibiricus (strain DSM

Query: 1 LQGPPGPR 8
++G PGPR
Sbjct: 23 IRGAPGPR 30


>sp|SAT_AERPE|SULFATE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LQGPPGP 7
+QGPP P
Sbjct: 160 IQGPPNP 166


>sp|DTDA_HYPBU|D-AMINOACYL-TRNA deacylase|Hyperthermus butylicus (strain DSM 5456

Query: 3 GPPGPRGP 10
G PGP P
Sbjct: 89 GNPGPEAP 96


>sp|ASRAC_PYRHO|ALANINE/SERINE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PPGPRG 9
PPGPR
Sbjct: 27 PPGPRA 32


>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 LQGPPG 6
L GPPG
Sbjct: 46 LHGPPG 51


>sp|TRM1_HALWD|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloquadratum walsbyi

Query: 3 GPPGPRGP 10
GP P GP
Sbjct: 117 GPESPLGP 124


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 LQGPPG 6
L GPPG
Sbjct: 191 LHGPPG 196


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 2 QGPPGPRG 9
+GP GP G
Sbjct: 216 KGPMGPTG 223


>sp|ACYP_PYRCJ|ACYLPHOSPHATASE calidifontis (strain DSM 21063

Query: 3 GPPGPR 8
GPPG R
Sbjct: 81 GPPGAR 86


>sp|ACYP_PYRAR|ACYLPHOSPHATASE arsenaticum (strain DSM 13514

Query: 3 GPPGPR 8
GPPG R
Sbjct: 66 GPPGAR 71




90|Sequence|446|455|GPRGPRGDRG

>sp|Y1387_METMP|MEMO1 family protein MMP1387|Methanococcus maripaludis (strain DSM

Query: 2 PRGPR 6
PRGPR
Sbjct: 30 PRGPR 34


>sp|END4_METST|PROBABLE endonuclease 4|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PRGPRGDRG 10
PR PRG +
Sbjct: 33 PRSPRGGKA 41


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 2 PRGPRGDR 9
PR P GDR
Sbjct: 326 PRSPAGDR 333


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 2 PRGPRGDR 9
PR P GDR
Sbjct: 326 PRSPAGDR 333


>sp|IXTPA_HYPBU|DITP/XTP pyrophosphatase|Hyperthermus butylicus (strain DSM 5456

Query: 5 PRGDRG 10
PRGDRG
Sbjct: 137 PRGDRG 142


>sp|Y360_CALMQ|PROTEIN Cmaq_0360|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 RGPRGD 8
+GPRGD
Sbjct: 196 KGPRGD 201


>sp|IXTPA_IGNH4|DITP/XTP pyrophosphatase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 PRGDRG 10
PRGD+G
Sbjct: 139 PRGDKG 144


>sp|Y412_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 3 RGPRGDRG 10
+GP DRG
Sbjct: 85 KGPGADRG 92


>sp|PURL_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus abyssi (strain GE5 /

Query: 2 PRGPR 6
PRGPR
Sbjct: 539 PRGPR 543


>sp|RFCL_IGNH4|REPLICATION factor C large subunit|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 PRGDRG 10
PRGD G
Sbjct: 116 PRGDEG 121


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 1 GPRGPRG 7
GP GP G
Sbjct: 217 GPMGPTG 223


>sp|SPCS_METKA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanopyrus kandleri (strain AV19 /

Query: 1 GPRGPRGD 8
GPRG R D
Sbjct: 381 GPRGVRAD 388




91|Sequence|451|460|RGDRGSQGPP

>sp|RNP4_AERPE|RIBONUCLEASE P protein component 4|Aeropyrum pernix (strain ATCC 700893

Query: 1 RGDRGSQGPP 10
R D+G QGPP
Sbjct: 134 REDKGPQGPP 143


>sp|RL31_METLZ|LARGE ribosomal subunit protein eL31|Methanocorpusculum labreanum

Query: 4 RGSQGPP 10
RGSQ PP
Sbjct: 59 RGSQKPP 65


>sp|ENO_HALWD|ENOLASE walsbyi (strain DSM 16790

Query: 1 RGDRGSQGPP 10
+GD G+ PP
Sbjct: 193 KGDEGAWAPP 202


>sp|METXA_METZD|HOMOSERINE O-acetyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 2 GDRGSQGP 9
G RGS GP
Sbjct: 99 GCRGSTGP 106


>sp|ENO3_METHJ|ENOLASE 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RGDRGSQGPP 10
+GD G+ PP
Sbjct: 190 KGDEGAWAPP 199


>sp|RL31_HALWD|LARGE ribosomal subunit protein eL31|Haloquadratum walsbyi (strain DSM

Query: 4 RGSQGPP 10
RGSQ PP
Sbjct: 62 RGSQNPP 68


>sp|RL31_METPE|LARGE ribosomal subunit protein eL31|Methanosphaerula palustris (strain

Query: 3 DRGSQGPP 10
+RGS+ PP
Sbjct: 58 ERGSEKPP 65


>sp|ENO_HALLT|ENOLASE lacusprofundi (strain ATCC 49239

Query: 1 RGDRGSQGPP 10
+GD G+ PP
Sbjct: 192 KGDEGAWAPP 201


>sp|ENO_SULTO|ENOLASE tokodaii (strain DSM 16993

Query: 2 GDRGSQGPP 10
GD G PP
Sbjct: 202 GDEGGVAPP 210


>sp|RS15_PYRFU|SMALL ribosomal subunit protein uS15|Pyrococcus furiosus (strain ATCC

Query: 1 RGDRGSQGPP 10
RG GS+ PP
Sbjct: 9 RGKSGSKRPP 18


>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RGDRGSQGP 9
RG +G GP
Sbjct: 328 RGQKGRDGP 336


>sp|RS15_PYRAB|SMALL ribosomal subunit protein uS15|Pyrococcus abyssi (strain GE5 /

Query: 1 RGDRGSQGPP 10
RG GS+ PP
Sbjct: 9 RGKSGSKRPP 18


>sp|RS15_THEKO|SMALL ribosomal subunit protein uS15|Thermococcus kodakarensis (strain

Query: 1 RGDRGSQGPP 10
RG GS+ PP
Sbjct: 9 RGKSGSKRPP 18


>sp|AATA_AERPE|A-TYPE ATP synthase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 3 DRGSQGPP 10
+RG Q PP
Sbjct: 111 ERGIQAPP 118




92|Sequence|456|465|SQGPPGPTGN

>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 PPGPTGN 10
PP PTGN
Sbjct: 46 PPYPTGN 52


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 2 QGPPGPTG 9
+GP GPTG
Sbjct: 216 KGPMGPTG 223


>sp|RIBL_METMJ|FAD synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 SQGPPGPTGN 10
++GPP PTG+
Sbjct: 136 TRGPPDPTGS 145


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 PPGPTGN 10
PP PTGN
Sbjct: 43 PPYPTGN 49


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 PPGPTGN 10
PP PTGN
Sbjct: 44 PPYPTGN 50


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 PPGPTGN 10
PP PTGN
Sbjct: 46 PPYPTGN 52


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PPGPTGN 10
PP PTGN
Sbjct: 46 PPYPTGN 52


>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 4 PPGPTGN 10
PPGPT +
Sbjct: 55 PPGPTSH 61


>sp|TRUB_PYRFU|PROBABLE tRNA pseudouridine synthase B|Pyrococcus furiosus (strain ATCC

Query: 4 PPGPTGN 10
PPGPT +
Sbjct: 54 PPGPTSH 60


>sp|TRUB_PYRAB|PROBABLE tRNA pseudouridine synthase B|Pyrococcus abyssi (strain GE5 /

Query: 4 PPGPTGN 10
PPGPT +
Sbjct: 54 PPGPTSH 60


>sp|TRUB_THEKO|PROBABLE tRNA pseudouridine synthase B|Thermococcus kodakarensis (strain

Query: 4 PPGPTGN 10
PPGPT +
Sbjct: 54 PPGPTSH 60


>sp|TRUB_PYRHO|PROBABLE tRNA pseudouridine synthase B|Pyrococcus horikoshii (strain ATCC

Query: 4 PPGPTGN 10
PPGPT +
Sbjct: 54 PPGPTSH 60


>sp|TRUB_THEGJ|PROBABLE tRNA pseudouridine synthase B|Thermococcus gammatolerans (strain

Query: 4 PPGPTGN 10
PPGPT +
Sbjct: 54 PPGPTSH 60


>sp|TRUB_THEON|PROBABLE tRNA pseudouridine synthase B|Thermococcus onnurineus (strain

Query: 4 PPGPTGN 10
PPGPT +
Sbjct: 54 PPGPTSH 60


>sp|GYRA_HALWD|DNA gyrase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 2 QGPPGPTG 9
QGP PTG
Sbjct: 224 QGPDFPTG 231


>sp|TRUB_AERPE|PROBABLE tRNA pseudouridine synthase B|Aeropyrum pernix (strain ATCC

Query: 4 PPGPTGN 10
PPGPT +
Sbjct: 64 PPGPTSH 70


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 PPGPTGN 10
PP P+GN
Sbjct: 44 PPYPSGN 50


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 4 PPGPTGN 10
PP P+GN
Sbjct: 44 PPYPSGN 50


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PPGPTGN 10
PP PTG+
Sbjct: 42 PPYPTGS 48


>sp|URIC_HALVD|URICASE volcanii (strain ATCC 29605

Query: 4 PPGPTG 9
PP PTG
Sbjct: 289 PPAPTG 294


>sp|SAT_AERPE|SULFATE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 QGPPGP 7
QGPP P
Sbjct: 161 QGPPNP 166


>sp|CCA_THEVO|CCA-ADDING enzyme|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GPPGPTGN 10
GPP T N
Sbjct: 339 GPPADTSN 346


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 PPGPTGN 10
PP PTG+
Sbjct: 45 PPYPTGS 51


>sp|APGM_SULTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PPGPTG 9
PPG TG
Sbjct: 271 PPGATG 276


>sp|URIC_HALJB|URICASE jeotgali (strain DSM 18796

Query: 4 PPGPTG 9
PP PTG
Sbjct: 287 PPRPTG 292


>sp|HAH4_HALMT|HALOCIN-H4 mediterranei (strain ATCC 33500

Query: 3 GPPGPTGN 10
PPGP G+
Sbjct: 49 APPGPNGD 56


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 4 PPGPTG 9
P GPTG
Sbjct: 360 PAGPTG 365


>sp|PFDB_METMJ|PREFOLDIN subunit beta|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 QGPPGP 7
Q PPGP
Sbjct: 115 QQPPGP 120




93|Sequence|461|470|GPTGNKGQKG

>sp|RS2_METJA|SMALL ribosomal subunit protein uS2|Methanocaldococcus jannaschii (strain

Query: 2 PTGNKGQKG 10
PT NKG+K
Sbjct: 156 PTNNKGKKA 164


>sp|RS2_THEKO|SMALL ribosomal subunit protein uS2|Thermococcus kodakarensis (strain

Query: 2 PTGNKGQKG 10
PT NKG+K
Sbjct: 154 PTNNKGRKA 162


>sp|RS2_PYRHO|SMALL ribosomal subunit protein uS2|Pyrococcus horikoshii (strain ATCC

Query: 2 PTGNKGQKG 10
PT NKG+K
Sbjct: 155 PTNNKGRKA 163


>sp|RS2_PYRFU|SMALL ribosomal subunit protein uS2|Pyrococcus furiosus (strain ATCC

Query: 2 PTGNKGQKG 10
PT NKG+K
Sbjct: 155 PTNNKGRKA 163


>sp|RS2_PYRAB|SMALL ribosomal subunit protein uS2|Pyrococcus abyssi (strain GE5 /

Query: 2 PTGNKGQKG 10
PT NKG+K
Sbjct: 155 PTNNKGRKA 163


>sp|RS2_METTP|SMALL ribosomal subunit protein uS2|Methanothrix thermoacetophila (strain

Query: 2 PTGNKGQKG 10
PT NKG+K
Sbjct: 165 PTNNKGRKA 173


>sp|RS2_METMA|SMALL ribosomal subunit protein uS2|Methanosarcina mazei (strain ATCC

Query: 2 PTGNKGQKG 10
PT NKG+K
Sbjct: 185 PTNNKGRKA 193


>sp|RS2_METLZ|SMALL ribosomal subunit protein uS2|Methanocorpusculum labreanum (strain

Query: 2 PTGNKGQKG 10
PT NKG+K
Sbjct: 163 PTNNKGRKA 171


>sp|RS2_METHJ|SMALL ribosomal subunit protein uS2|Methanospirillum hungatei JF-1

Query: 2 PTGNKGQKG 10
PT NKG+K
Sbjct: 163 PTNNKGRKA 171


>sp|RS2_METBU|SMALL ribosomal subunit protein uS2|Methanococcoides burtonii (strain DSM

Query: 2 PTGNKGQKG 10
PT NKG+K
Sbjct: 175 PTNNKGRKA 183


>sp|RS2_METB6|SMALL ribosomal subunit protein uS2|Methanoregula boonei (strain DSM

Query: 2 PTGNKGQKG 10
PT NKG+K
Sbjct: 164 PTNNKGRKA 172


>sp|RS2_METAR|SMALL ribosomal subunit protein uS2|Methanocella arvoryzae (strain DSM

Query: 2 PTGNKGQKG 10
PT NKG+K
Sbjct: 167 PTNNKGRKA 175


>sp|RS2_METAC|SMALL ribosomal subunit protein uS2|Methanosarcina acetivorans (strain

Query: 2 PTGNKGQKG 10
PT NKG+K
Sbjct: 186 PTNNKGRKA 194


>sp|RS2_METMP|SMALL ribosomal subunit protein uS2|Methanococcus maripaludis (strain DSM

Query: 2 PTGNKGQK 9
PT NKG+K
Sbjct: 156 PTNNKGRK 163


>sp|RS2_METM7|SMALL ribosomal subunit protein uS2|Methanococcus maripaludis (strain C7

Query: 2 PTGNKGQK 9
PT NKG+K
Sbjct: 156 PTNNKGRK 163


>sp|RS2_METM6|SMALL ribosomal subunit protein uS2|Methanococcus maripaludis (strain C6

Query: 2 PTGNKGQK 9
PT NKG+K
Sbjct: 156 PTNNKGRK 163


>sp|RS2_METBF|SMALL ribosomal subunit protein uS2|Methanosarcina barkeri (strain Fusaro

Query: 2 PTGNKGQKG 10
PT NKG+K
Sbjct: 186 PTNNKGRKA 194


>sp|RS2_METM5|SMALL ribosomal subunit protein uS2|Methanococcus maripaludis (strain C5

Query: 2 PTGNKGQK 9
PT NKG+K
Sbjct: 156 PTNNKGRK 163


>sp|RS2_NATPD|SMALL ribosomal subunit protein uS2|Natronomonas pharaonis (strain ATCC

Query: 2 PTGNKGQKG 10
PT NKG+K
Sbjct: 238 PTNNKGRKA 246


>sp|RS2_METKA|SMALL ribosomal subunit protein uS2|Methanopyrus kandleri (strain AV19 /

Query: 2 PTGNKGQKG 10
PT NKG+K
Sbjct: 157 PTNNKGRKA 165


>sp|RS2_HALMA|SMALL ribosomal subunit protein uS2|Haloarcula marismortui (strain ATCC

Query: 2 PTGNKGQKG 10
PT NKG+K
Sbjct: 228 PTNNKGRKA 236


>sp|RS2_METMJ|SMALL ribosomal subunit protein uS2|Methanoculleus marisnigri (strain

Query: 2 PTGNKGQKG 10
PT NKG+K
Sbjct: 166 PTNNKGRKA 174


>sp|RS2_METVS|SMALL ribosomal subunit protein uS2|Methanococcus vannielii (strain ATCC

Query: 2 PTGNKGQK 9
PT NKG+K
Sbjct: 156 PTNNKGRK 163


>sp|RS2_META3|SMALL ribosomal subunit protein uS2|Methanococcus aeolicus (strain ATCC

Query: 2 PTGNKGQK 9
PT NKG+K
Sbjct: 156 PTNNKGRK 163


>sp|GCSPB_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 4 GNKGQKG 10
GNKG+KG
Sbjct: 16 GNKGRKG 22


>sp|RS2_ARCFU|SMALL ribosomal subunit protein uS2|Archaeoglobus fulgidus (strain ATCC

Query: 2 PTGNKGQKG 10
PT NKG++
Sbjct: 158 PTNNKGRRA 166


>sp|RS2_THEPD|SMALL ribosomal subunit protein uS2|Thermofilum pendens (strain DSM 2475

Query: 2 PTGNKGQKG 10
PT N+G+K
Sbjct: 163 PTNNRGRKA 171


>sp|RS2_THEVO|SMALL ribosomal subunit protein uS2|Thermoplasma volcanium (strain ATCC

Query: 2 PTGNKGQK 9
PT NKG++
Sbjct: 155 PTNNKGRR 162


>sp|RS2_THEAC|SMALL ribosomal subunit protein uS2|Thermoplasma acidophilum (strain ATCC

Query: 2 PTGNKGQK 9
PT NKG++
Sbjct: 155 PTNNKGRR 162


>sp|RS2_PICTO|SMALL ribosomal subunit protein uS2|Picrophilus torridus (strain ATCC

Query: 2 PTGNKGQK 9
PT NKG++
Sbjct: 156 PTNNKGRR 163


>sp|RS2_HALWD|SMALL ribosomal subunit protein uS2|Haloquadratum walsbyi (strain DSM

Query: 2 PTGNKGQKG 10
PT NKG++
Sbjct: 240 PTNNKGRRA 248


>sp|Y360_METJA|UNCHARACTERIZED protein MJ0360|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPTGNKGQK 9
GP G +G+K
Sbjct: 113 GPIGEEGKK 121


>sp|RS2_METS5|SMALL ribosomal subunit protein uS2|Metallosphaera sedula (strain ATCC

Query: 2 PTGNKGQK 9
P+ NKG+K
Sbjct: 179 PSNNKGRK 186


>sp|RS2_HALSA|SMALL ribosomal subunit protein uS2|Halobacterium salinarum (strain ATCC

Query: 2 PTGNKGQKG 10
PT NKG++
Sbjct: 210 PTNNKGRRA 218


>sp|RS2_HALS3|SMALL ribosomal subunit protein uS2|Halobacterium salinarum (strain ATCC

Query: 2 PTGNKGQKG 10
PT NKG++
Sbjct: 210 PTNNKGRRA 218


>sp|H669_METJA|PROBABLE ATP-dependent RNA helicase MJ0669|Methanocaldococcus jannaschii

Query: 1 GPTGNKGQKG 10
G TG G+KG
Sbjct: 327 GRTGRAGKKG 336


>sp|RS2_METST|SMALL ribosomal subunit protein uS2|Methanosphaera stadtmanae (strain

Query: 2 PTGNKGQKG 10
P NKG+K
Sbjct: 154 PVNNKGRKA 162


>sp|RS2_METS3|SMALL ribosomal subunit protein uS2|Methanobrevibacter smithii (strain

Query: 2 PTGNKGQKG 10
P NKG+K
Sbjct: 154 PVNNKGRKA 162


>sp|RS2_METTH|SMALL ribosomal subunit protein uS2|Methanothermobacter

Query: 2 PTGNKGQKG 10
P NKG+K
Sbjct: 154 PVNNKGRKA 162


>sp|RS2_SULTO|SMALL ribosomal subunit protein uS2|Sulfurisphaera tokodaii (strain DSM

Query: 2 PTGNKGQK 9
P NKG+K
Sbjct: 179 PANNKGRK 186


>sp|RS2_SULAC|SMALL ribosomal subunit protein uS2|Sulfolobus acidocaldarius (strain

Query: 2 PTGNKGQK 9
P NKG+K
Sbjct: 179 PANNKGRK 186


>sp|RS2_SACS2|SMALL ribosomal subunit protein uS2|Saccharolobus solfataricus (strain

Query: 2 PTGNKGQK 9
P NKG+K
Sbjct: 185 PANNKGRK 192


>sp|RS2_HYPBU|SMALL ribosomal subunit protein uS2|Hyperthermus butylicus (strain DSM

Query: 2 PTGNKGQK 9
P NKG+K
Sbjct: 169 PVNNKGRK 176


>sp|RS2_STAMF|SMALL ribosomal subunit protein uS2|Staphylothermus marinus (strain ATCC

Query: 2 PTGNKGQK 9
P NKG+K
Sbjct: 174 PANNKGRK 181


>sp|DACZ_HALVD|DIADENYLATE cyclase|Haloferax volcanii (strain ATCC 29605

Query: 4 GNKGQKG 10
G KGQKG
Sbjct: 137 GKKGQKG 143


>sp|RTCA_STAMF|RNA 3'-terminal phosphate cyclase|Staphylothermus marinus (strain ATCC

Query: 4 GNKGQKG 10
GNKG+KG
Sbjct: 340 GNKGEKG 346


>sp|DTDA_METPE|D-AMINOACYL-TRNA deacylase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 PTGNKGQ 8
PTGN G+
Sbjct: 80 PTGNPGE 86




94|Sequence|466|475|KGQKGEKGEP

>sp|DACZ_HALVD|DIADENYLATE cyclase|Haloferax volcanii (strain ATCC 29605

Query: 2 GQKGEKGEP 10
G+KG+KGEP
Sbjct: 137 GKKGQKGEP 145


>sp|BGAL_HALL2|BETA-GALACTOSIDASE BgaH|Haloferax lucentense (strain DSM 14919

Query: 3 QKGEKGEP 10
Q+G KG+P
Sbjct: 299 QRGAKGKP 306




95|Sequence|471|480|EKGEPGPPGP

>sp|Y520_METJA|PUTATIVE NADH-ubiquinone oxidoreductase MJ0520|Methanocaldococcus

Query: 2 KGEPGPP 8
+G PGPP
Sbjct: 37 QGRPGPP 43


>sp|SYR_SULTO|ARGININE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GEPGPP 8
GEP PP
Sbjct: 171 GEPNPP 176


>sp|TRUA_ARCFU|TRNA pseudouridine synthase A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EKGEPGPP 8
E+ EP PP
Sbjct: 206 ERVEPAPP 213


>sp|RRP42_SACS2|EXOSOME complex component Rrp42|Saccharolobus solfataricus (strain ATCC

Query: 1 EKGEPGPP 8
E EPGPP
Sbjct: 96 ETFEPGPP 103


>sp|RRP42_SACI7|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 EKGEPGPP 8
E EPGPP
Sbjct: 96 ETFEPGPP 103


>sp|RRP42_SACI6|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EKGEPGPP 8
E EPGPP
Sbjct: 96 ETFEPGPP 103


>sp|RRP42_SACI2|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 EKGEPGPP 8
E EPGPP
Sbjct: 96 ETFEPGPP 103


>sp|RRP42_SACI1|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 EKGEPGPP 8
E EPGPP
Sbjct: 96 ETFEPGPP 103


>sp|RRP42_SACI4|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.14.25 /

Query: 1 EKGEPGPP 8
E EPGPP
Sbjct: 96 ETFEPGPP 103


>sp|RRP42_SACI3|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.27)

Query: 1 EKGEPGPP 8
E EPGPP
Sbjct: 96 ETFEPGPP 103


>sp|RRP42_SULTO|EXOSOME complex component Rrp42|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EKGEPGPP 8
E EPGPP
Sbjct: 96 ETFEPGPP 103


>sp|RS3A_AERPE|SMALL ribosomal subunit protein eS1|Aeropyrum pernix (strain ATCC 700893

Query: 5 PGPPGP 10
PGP GP
Sbjct: 195 PGPNGP 200


>sp|COXX1_CENSY|PROTOHEME IX farnesyltransferase 1|Cenarchaeum symbiosum (strain A)

Query: 3 GEPGP 7
GEPGP
Sbjct: 35 GEPGP 39


>sp|FAU1_HYPBU|PROBABLE ribonuclease FAU-1|Hyperthermus butylicus (strain DSM 5456

Query: 1 EKGEPGPPG 9
++ E GPPG
Sbjct: 235 KRAEEGPPG 243


>sp|SRP54_METLZ|SIGNAL recognition particle 54 kDa|Methanocorpusculum labreanum (strain

Query: 1 EKGEPGPPGP 10
+KG GP GP
Sbjct: 436 QKGGMGPMGP 445


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EPGPPG 9
EPGP G
Sbjct: 789 EPGPSG 794


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EKGEPGPPG 9
E G P PPG
Sbjct: 468 ENGNPAPPG 476


>sp|RRP42_METKA|EXOSOME complex component Rrp42|Methanopyrus kandleri (strain AV19 /

Query: 4 EPGPP 8
EPGPP
Sbjct: 94 EPGPP 98


>sp|Y1154_METTH|UNIVERSAL stress protein MTH_1154|Methanothermobacter thermautotrophicus

Query: 1 EKGEPGPPGP 10
EKG GP P
Sbjct: 73 EKGLTGPENP 82


>sp|TRMY_METAR|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocella arvoryzae

Query: 3 GEPGPP 8
GEP PP
Sbjct: 58 GEPTPP 63




96|Sequence|476|485|GPPGPAGERG

>sp|PYRG_METST|CTP synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 PGPAGERG 10
PG GERG
Sbjct: 351 PGGFGERG 358


>sp|THPS_SULAC|THERMOPSIN acidocaldarius (strain ATCC 33909

Query: 2 PPGPAG 7
PP PAG
Sbjct: 52 PPAPAG 57


>sp|QUEC_AERPE|7-CYANO-7-DEAZAGUANINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PPGPAGE 8
PPGP E
Sbjct: 247 PPGPEAE 253


>sp|DNAK_HALWD|CHAPERONE protein DnaK|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PPGPAG 7
PP PAG
Sbjct: 437 PPAPAG 442


>sp|DNAK_HALSA|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 700922

Query: 2 PPGPAG 7
PP PAG
Sbjct: 436 PPAPAG 441


>sp|DNAK_HALS3|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 29341

Query: 2 PPGPAG 7
PP PAG
Sbjct: 436 PPAPAG 441


>sp|DNAK_HALLT|CHAPERONE protein DnaK|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 PPGPAG 7
PP PAG
Sbjct: 437 PPAPAG 442


>sp|PYRG_META3|CTP synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PGPAGERG 10
PG GERG
Sbjct: 357 PGGFGERG 364


>sp|DNAK_HALMA|CHAPERONE protein DnaK|Haloarcula marismortui (strain ATCC 43049

Query: 2 PPGPAG 7
PP PAG
Sbjct: 436 PPAPAG 441


>sp|DNAK_NATPD|CHAPERONE protein DnaK|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PPGPAG 7
PP PAG
Sbjct: 437 PPAPAG 442


>sp|THII_PYRAE|TRNA sulfurtransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PPGPAGERG 10
PP GERG
Sbjct: 475 PPSSQGERG 483


>sp|Y241_ARCFU|S-ADENOSYL-L-METHIONINE-BINDING protein AF_0241|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PPGPAGERG 10
PPG ERG
Sbjct: 69 PPGETEERG 77


>sp|RIBL_METMJ|FAD synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GPPGPAGERG 10
GPP P G G
Sbjct: 138 GPPDPTGSHG 147


>sp|DNAK_HALMT|CHAPERONE protein DnaK|Haloferax mediterranei (strain ATCC 33500

Query: 2 PPGPAG 7
PP PAG
Sbjct: 437 PPAPAG 442


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PGPAGERG 10
PG GERG
Sbjct: 350 PGGFGERG 357


>sp|HAH4_HALMT|HALOCIN-H4 mediterranei (strain ATCC 33500

Query: 1 GPPGPAGE 8
PPGP G+
Sbjct: 49 APPGPNGD 56


>sp|PFDB_METMJ|PREFOLDIN subunit beta|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PPGPA 6
PPGPA
Sbjct: 117 PPGPA 121


>sp|MVHB_METTH|POLYFERREDOXIN protein MvhB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GPPGPAGERG 10
GP PA E G
Sbjct: 268 GPAKPASEEG 277


>sp|HIS8_METKA|HISTIDINOL-PHOSPHATE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 GPPGPAGE 8
PP PAGE
Sbjct: 94 DPPYPAGE 101




97|Sequence|481|490|AGERGPIGPA

>sp|MCRA_METVO|METHYL-COENZYME M reductase subunit alpha|Methanococcus voltae

Query: 1 AGERGPIGPA 10
AGER PI PA
Sbjct: 544 AGERDPILPA 553


>sp|MCRA_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 AGERGPIGPA 10
AGER PI PA
Sbjct: 543 AGERDPIIPA 552


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 1 AGERGPIGP 9
+G +GP+GP
Sbjct: 213 SGHKGPMGP 221


>sp|CDC69_HALSA|ORC1-TYPE DNA replication protein 9|Halobacterium salinarum (strain ATCC

Query: 3 ERGPIGPA 10
E GP+GP+
Sbjct: 292 EHGPLGPS 299


>sp|Y1830_SULTO|UPF0273 protein STK_18300|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AGERGPIGPA 10
AGERG GP
Sbjct: 176 AGERGFGGPG 185


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 1 AGERGPI 7
AG RGP+
Sbjct: 27 AGNRGPV 33


>sp|SRP54_METLZ|SIGNAL recognition particle 54 kDa|Methanocorpusculum labreanum (strain

Query: 2 GERGPIGP 9
G GP+GP
Sbjct: 438 GGMGPMGP 445




98|Sequence|486|495|PIGPAGPPGE

>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 PIGPAGPPG 9
PI AGPPG
Sbjct: 41 PILLAGPPG 49


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM

Query: 1 PIGPAGPPG 9
PI AGPPG
Sbjct: 41 PILLAGPPG 49


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 PIGPAGPPG 9
PI AGPPG
Sbjct: 41 PILLAGPPG 49


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 PIGPAGPPG 9
PI AGPPG
Sbjct: 41 PILLAGPPG 49


>sp|RFCL_ARCFU|REPLICATION factor C large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PIGPAGPPG 9
P+ AGPPG
Sbjct: 38 PLLLAGPPG 46


>sp|HIS7_METMJ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PIGPAGPPGE 10
P+GP G PG+
Sbjct: 123 PVGPGGIPGD 132


>sp|RFCS_THEPD|REPLICATION factor C small subunit|Thermofilum pendens (strain DSM 2475

Query: 5 AGPPG 9
AGPPG
Sbjct: 43 AGPPG 47


>sp|RFCS_THEKO|REPLICATION factor C small subunit|Thermococcus kodakarensis (strain ATCC

Query: 5 AGPPG 9
AGPPG
Sbjct: 52 AGPPG 56


>sp|RFCS_SULAC|REPLICATION factor C small subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 5 AGPPG 9
AGPPG
Sbjct: 44 AGPPG 48


>sp|RFCS_STAMF|REPLICATION factor C small subunit|Staphylothermus marinus (strain ATCC 43588

Query: 5 AGPPG 9
AGPPG
Sbjct: 50 AGPPG 54


>sp|RFCS_SACS2|REPLICATION factor C small subunit|Saccharolobus solfataricus (strain ATCC

Query: 5 AGPPG 9
AGPPG
Sbjct: 47 AGPPG 51


>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 AGPPG 9
AGPPG
Sbjct: 54 AGPPG 58


>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 5 AGPPG 9
AGPPG
Sbjct: 52 AGPPG 56


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 5 AGPPG 9
AGPPG
Sbjct: 54 AGPPG 58


>sp|RFCS_NANEQ|REPLICATION factor C small subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 5 AGPPG 9
AGPPG
Sbjct: 41 AGPPG 45


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 5 AGPPG 9
AGPPG
Sbjct: 50 AGPPG 54


>sp|RFCS_AERPE|REPLICATION factor C small subunit|Aeropyrum pernix (strain ATCC 700893

Query: 5 AGPPG 9
AGPPG
Sbjct: 46 AGPPG 50


>sp|RFCL_THEKO|REPLICATION factor C large subunit|Thermococcus kodakarensis (strain ATCC

Query: 5 AGPPG 9
AGPPG
Sbjct: 49 AGPPG 53


>sp|RFCL_PYRHO|REPLICATION factor C large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 AGPPG 9
AGPPG
Sbjct: 49 AGPPG 53


>sp|RFCL_PYRFU|REPLICATION factor C large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 5 AGPPG 9
AGPPG
Sbjct: 49 AGPPG 53


>sp|RFCL_PYRAR|REPLICATION factor C large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 AGPPG 9
AGPPG
Sbjct: 62 AGPPG 66


>sp|RFCL_PYRAE|REPLICATION factor C large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 AGPPG 9
AGPPG
Sbjct: 62 AGPPG 66


>sp|RFCL_PYRAB|REPLICATION factor C large subunit|Pyrococcus abyssi (strain GE5 /

Query: 5 AGPPG 9
AGPPG
Sbjct: 49 AGPPG 53


>sp|Y2139_METS5|MEMO1 family protein Msed_2139|Metallosphaera sedula (strain ATCC 51363

Query: 1 PIGPAGPP 8
PIGP G P
Sbjct: 30 PIGPGGIP 37


>sp|Y249_PYRAB|PUTATIVE GTPase PYRAB02490|Pyrococcus abyssi (strain GE5 /

Query: 2 IGPAGPPG 9
+G GPPG
Sbjct: 48 VGITGPPG 55


>sp|Y274_PYRHO|PUTATIVE GTPase PH0274|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IGPAGPPG 9
+G GPPG
Sbjct: 50 VGITGPPG 57


>sp|ILVD_HALMA|DIHYDROXY-ACID dehydratase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PIGPAGPPGE 10
P+G A PP E
Sbjct: 226 PLGSASPPAE 235


>sp|ILVD_NATPD|DIHYDROXY-ACID dehydratase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PIGPAGPPGE 10
P+G A PP E
Sbjct: 237 PLGSASPPAE 246


>sp|HEM1_NATPD|GLUTAMYL-TRNA reductase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PIGPAGPPGE 10
P GP G P E
Sbjct: 426 PDGPEGVPEE 435


>sp|APGM_METS5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PIGPAGPPG 9
PIGP PG
Sbjct: 50 PIGPGIVPG 58


>sp|HMDH_AERPE|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PIGPAGP 7
P+G AGP
Sbjct: 83 PVGVAGP 89


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 2 IGPAGPPG 9
I PAGP G
Sbjct: 358 INPAGPTG 365


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 3 GPAGPPG 9
GP GP G
Sbjct: 217 GPMGPTG 223




99|Sequence|491|500|GPPGERGGKG

>sp|PURP_METTH|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothermobacter thermautotrophicus

Query: 3 PGERGGKG 10
PG RGG+G
Sbjct: 160 PGARGGRG 167


>sp|PURP_METST|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosphaera stadtmanae (strain ATCC

Query: 3 PGERGGKG 10
PG RGG+G
Sbjct: 160 PGARGGQG 167


>sp|PURP_METS3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanobrevibacter smithii (strain ATCC

Query: 3 PGERGGKG 10
PG RGG+G
Sbjct: 160 PGARGGRG 167


>sp|PURP_META3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus aeolicus (strain ATCC

Query: 3 PGERGGKG 10
PG RGG+G
Sbjct: 158 PGARGGRG 165


>sp|PURP_METJA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanocaldococcus jannaschii (strain

Query: 3 PGERGGKG 10
PG RGG+G
Sbjct: 158 PGARGGRG 165


>sp|PURP_METAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanocella arvoryzae (strain DSM

Query: 3 PGERGGKG 10
PG RGG+G
Sbjct: 162 PGARGGRG 169


>sp|PURP_SULTO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfurisphaera tokodaii (strain DSM

Query: 3 PGERGGKG 10
PG +GGKG
Sbjct: 136 PGAKGGKG 143


>sp|PURP_SULAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfolobus acidocaldarius (strain ATCC

Query: 3 PGERGGKG 10
PG +GGKG
Sbjct: 137 PGAKGGKG 144


>sp|PURP_ARCFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Archaeoglobus fulgidus (strain ATCC

Query: 3 PGERGGKG 10
PG +GGKG
Sbjct: 156 PGAKGGKG 163


>sp|PURP_METKA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanopyrus kandleri (strain AV19 /

Query: 3 PGERGGKG 10
PG RGG+G
Sbjct: 158 PGARGGRG 165


>sp|Y2030_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 2 PPGERGGKG 10
PP GGKG
Sbjct: 272 PPSRIGGKG 280


>sp|APE2_AERPE|HOMING endonuclease I-ApeII|Aeropyrum pernix (strain ATCC 700893

Query: 2 PPGER 6
PPGER
Sbjct: 163 PPGER 167


>sp|PURP_METS5|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Metallosphaera sedula (strain ATCC

Query: 3 PGERGGKG 10
PG +GG+G
Sbjct: 135 PGAKGGRG 142


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 PPGERGGK 9
P GE GGK
Sbjct: 677 PVGEEGGK 684


>sp|ARGDC_AERPE|ARGININE decarboxylase proenzyme|Aeropyrum pernix (strain ATCC 700893

Query: 3 PGERGG 8
PGE+GG
Sbjct: 55 PGEKGG 60


>sp|GCSPA_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 2 PPGERG 7
PP ERG
Sbjct: 188 PPNERG 193


>sp|PURP_PYRAB|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus abyssi (strain GE5 /

Query: 2 PPGERGGKG 10
P G +GG+G
Sbjct: 136 PHGAKGGRG 144


>sp|MPGP_AERPE|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PPGER 6
PPGER
Sbjct: 63 PPGER 67


>sp|ALAXL_PYRHO|ALANYL-TRNA editing protein AlaX-L|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GPPGERG 7
G PG+RG
Sbjct: 44 GQPGDRG 50


>sp|Y1232_METJA|UNCHARACTERIZED protein MJ1232|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPPGERGG 8
G PG +GG
Sbjct: 56 GVPGPKGG 63


>sp|CHED_METHJ|PROBABLE chemoreceptor glutamine deamidase CheD|Methanospirillum hungatei

Query: 1 GPPGERGGK 9
G P ER GK
Sbjct: 61 GKPNERAGK 69


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 GPPGERGGK 9
G PG GGK
Sbjct: 401 GEPGVVGGK 409


>sp|IDI2_PICTO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Picrophilus torridus (strain ATCC 700027

Query: 2 PPGERGGKG 10
P G+R KG
Sbjct: 164 PEGDRNSKG 172


>sp|KAE1B_METAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 GPPGERGGKG 10
PPGER G
Sbjct: 349 APPGERLDNG 358


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 1 GPPGERGGK 9
G PG GGK
Sbjct: 401 GEPGVVGGK 409


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 GPPGERGGK 9
G PG GGK
Sbjct: 401 GEPGVVGGK 409


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 GPPGERGGK 9
G PG GGK
Sbjct: 401 GEPGVVGGK 409


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 GPPGERGGK 9
G PG GGK
Sbjct: 401 GEPGVVGGK 409


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 GPPGERGGK 9
G PG GGK
Sbjct: 401 GEPGVVGGK 409


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 GPPGERGGK 9
G PG GGK
Sbjct: 401 GEPGVVGGK 409


>sp|BIOW_METRM|6-CARBOXYHEXANOATE--COA ligase|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 GPPGERGGK 9
G P E GGK
Sbjct: 15 GGPHEEGGK 23


>sp|GUAAA_METAR|GMP synthase [glutamine-hydrolyzing] subunit A|Methanocella arvoryzae

Query: 1 GPPGERGGKG 10
GP ER G G
Sbjct: 55 GPTMERAGNG 64


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GPPGERGGKG 10
GP GER G
Sbjct: 832 GPDGERDALG 841


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 GPPGERGGK 9
G PG GGK
Sbjct: 401 GEPGVVGGK 409


>sp|PURP_METM5|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C5 /

Query: 3 PGERGGKG 10
PG RGG+G
Sbjct: 158 PGARGGRG 165


>sp|IDI2_THEAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PPGERGGKG 10
P G+R KG
Sbjct: 164 PEGDRNSKG 172


>sp|PURP_METMP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain DSM

Query: 3 PGERGGKG 10
PG RGG+G
Sbjct: 158 PGARGGRG 165


>sp|PURP_METM7|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C7 /

Query: 3 PGERGGKG 10
PG RGG+G
Sbjct: 158 PGARGGRG 165


>sp|PURP_METM6|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C6 /

Query: 3 PGERGGKG 10
PG RGG+G
Sbjct: 158 PGARGGRG 165


>sp|PURP_METVS|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus vannielii (strain ATCC

Query: 3 PGERGGKG 10
PG RGG+G
Sbjct: 158 PGARGGRG 165




100|Sequence|496|505|RGGKGSKGSQ

>sp|XERA_THEKO|TYROSINE recombinase XerA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RGGKGSK 7
RGGKG+K
Sbjct: 154 RGGKGAK 160


>sp|XERA_THEON|TYROSINE recombinase XerA|Thermococcus onnurineus (strain NA1)

Query: 1 RGGKGSK 7
RGGKG+K
Sbjct: 154 RGGKGAK 160


>sp|XERA_PYRFU|TYROSINE recombinase XerA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RGGKGSK 7
RGGKG K
Sbjct: 157 RGGKGGK 163


>sp|PCNA_METLZ|DNA polymerase sliding clamp|Methanocorpusculum labreanum (strain ATCC

Query: 2 GGKGSKG 8
GGKGS G
Sbjct: 231 GGKGSVG 237


>sp|TRUB_PICTO|PROBABLE tRNA pseudouridine synthase B|Picrophilus torridus (strain ATCC

Query: 1 RGGKGSKG 8
RGG GSKG
Sbjct: 330 RGGTGSKG 337


>sp|XERA_PYRHO|TYROSINE recombinase XerA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RGGKGSK 7
RGGKG K
Sbjct: 157 RGGKGGK 163


>sp|Y2205_ARCFU|UNCHARACTERIZED protein AF_2205|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RGGKGSKGS 9
RGG+ KGS
Sbjct: 287 RGGRLGKGS 295


>sp|XERA_PYRAB|TYROSINE recombinase XerA|Pyrococcus abyssi (strain GE5 /

Query: 1 RGGKGSK 7
RGGKG K
Sbjct: 157 RGGKGGK 163




101|Sequence|501|510|SKGSQGPKGS

>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 2 KGSQGP 7
KGSQGP
Sbjct: 723 KGSQGP 728


>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 KGSQGPKG 9
KG Q PKG
Sbjct: 33 KGDQQPKG 40




102|Sequence|506|515|GPKGSRGSPG

>sp|PINA_SULAC|HOLLIDAY junction branch migration ATPase|Sulfolobus acidocaldarius (strain

Query: 2 PKGSRGSPG 10
PK +G PG
Sbjct: 148 PKAKKGKPG 156


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GPKGSRGSP 9
GPKG+ G P
Sbjct: 430 GPKGAPGMP 438


>sp|CS3HD_THETK|CRISPR-ASSOCIATED endonuclease Cas3-HD|Thermoproteus tenax (strain ATCC 35583

Query: 4 GSRGSPG 10
G+RG PG
Sbjct: 204 GARGRPG 210


>sp|MTD_METHJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanospirillum

Query: 1 GPKGSR 6
GPKG+R
Sbjct: 74 GPKGAR 79


>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 PKGSRGSP 9
P G RGSP
Sbjct: 457 PGGPRGSP 464


>sp|DSRA_ARCFU|SULFITE reductase, dissimilatory-type subunit alpha|Archaeoglobus

Query: 2 PKGSRG 7
PKG+RG
Sbjct: 42 PKGARG 47




103|Sequence|511|520|RGSPGKPGPQ

>sp|ARLY_METTP|ARGININOSUCCINATE lyase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 RGSPGKPGPQ 10
R PG P P+
Sbjct: 433 RSKPGGPAPE 442


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RGSPGKPGP 9
R PG+P P
Sbjct: 507 RSRPGRPSP 515


>sp|PUS10_THEPD|TRNA pseudouridine synthase Pus10|Thermofilum pendens (strain DSM 2475

Query: 1 RGSPGKPGPQ 10
RG P P PQ
Sbjct: 219 RGLPQNPWPQ 228


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RGSPGKPGP 9
R PG+P P
Sbjct: 507 RSRPGRPSP 515


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RGSPGKPGP 9
R SP KP P
Sbjct: 502 RSSPTKPSP 510


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 PGKPGPQ 10
PGKP P+
Sbjct: 411 PGKPSPE 417


>sp|RF11_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 1 RGSPGKPGP 9
R PG+P P
Sbjct: 342 RWKPGEPAP 350


>sp|RF1_METMA|PEPTIDE chain release factor subunit|Methanosarcina mazei (strain ATCC

Query: 1 RGSPGKPGP 9
R PG+P P
Sbjct: 342 RWKPGEPAP 350


>sp|PUR5_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 RGSPGKPG 8
RG PG+P
Sbjct: 33 RGKPGEPA 40


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 RGSPGKPGP 9
R PG+P P
Sbjct: 511 RSRPGRPSP 519


>sp|KITH_HALSA|THYMIDINE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RGSPGKPGPQ 10
RG P +P PQ
Sbjct: 124 RGEPFEPVPQ 133


>sp|KITH_HALS3|THYMIDINE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 RGSPGKPGPQ 10
RG P +P PQ
Sbjct: 124 RGEPFEPVPQ 133


>sp|HIS5_THEKO|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus kodakarensis

Query: 3 SPGKPG 8
SPGKPG
Sbjct: 85 SPGKPG 90


>sp|COXX1_CENSY|PROTOHEME IX farnesyltransferase 1|Cenarchaeum symbiosum (strain A)

Query: 3 SPGKPGP 9
S G+PGP
Sbjct: 33 SAGEPGP 39


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RGSPGKPGP 9
+ PG+P P
Sbjct: 507 KSRPGRPSP 515


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 RGSPGKPGP 9
+ PG+P P
Sbjct: 507 KSRPGRPSP 515


>sp|MTD_METTH|F420-DEPENDENT methylenetetrahydromethanopterin

Query: 3 SPGKPGP 9
+PG PGP
Sbjct: 69 NPGAPGP 75


>sp|MTD_METTM|F420-DEPENDENT methylenetetrahydromethanopterin

Query: 3 SPGKPGP 9
+PG PGP
Sbjct: 69 NPGAPGP 75


>sp|AROA_METMA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosarcina mazei (strain ATCC

Query: 1 RGSPGKPG 8
+GS GKPG
Sbjct: 71 QGSNGKPG 78


>sp|RPIA_AERPE|RIBOSE-5-PHOSPHATE isomerase A|Aeropyrum pernix (strain ATCC 700893

Query: 1 RGSPGKPGP 9
R SPGK GP
Sbjct: 163 RTSPGKRGP 171


>sp|MUTS2_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 1 RGSPGKPGP 9
RGS G GP
Sbjct: 252 RGSSGAVGP 260


>sp|RS3_AERPE|SMALL ribosomal subunit protein uS3|Aeropyrum pernix (strain ATCC 700893

Query: 4 PGKPG 8
PGKPG
Sbjct: 187 PGKPG 191


>sp|GSA_THEVO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GSPGKPG 8
GSP PG
Sbjct: 157 GSPSSPG 163




104|Sequence|516|525|KPGPQGSSGD

>sp|NADK_SACS2|NAD kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 PQGSSG 9
PQGSSG
Sbjct: 145 PQGSSG 150


>sp|GLYA_STAMF|SERINE hydroxymethyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 2 PGPQG 6
PGPQG
Sbjct: 235 PGPQG 239


>sp|GLYA_METTH|SERINE hydroxymethyltransferase|Methanothermobacter thermautotrophicus

Query: 2 PGPQG 6
PGPQG
Sbjct: 230 PGPQG 234


>sp|GLYA_PYRIL|SERINE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PGPQG 6
PGPQG
Sbjct: 229 PGPQG 233


>sp|NADK_SACI7|NAD kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 PQGSSG 9
PQGSSG
Sbjct: 145 PQGSSG 150


>sp|NADK_SACI6|NAD kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 PQGSSG 9
PQGSSG
Sbjct: 145 PQGSSG 150


>sp|NADK_SACI4|NAD kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 PQGSSG 9
PQGSSG
Sbjct: 145 PQGSSG 150


>sp|NADK_SACI3|NAD kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 PQGSSG 9
PQGSSG
Sbjct: 145 PQGSSG 150


>sp|NADK_SACI2|NAD kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 PQGSSG 9
PQGSSG
Sbjct: 145 PQGSSG 150


>sp|NADK_SACI1|NAD kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 PQGSSG 9
PQGSSG
Sbjct: 145 PQGSSG 150


>sp|GLYA_SACS2|SERINE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 2 PGPQGSS 8
PGPQG +
Sbjct: 230 PGPQGGA 236


>sp|GLYA_PYRAE|SERINE hydroxymethyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PGPQG 6
PGPQG
Sbjct: 229 PGPQG 233


>sp|GLYA_METS5|SERINE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 2 PGPQGSS 8
PGPQG +
Sbjct: 230 PGPQGGA 236


>sp|GLYA_SACI2|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 2 PGPQGSS 8
PGPQG +
Sbjct: 230 PGPQGGA 236


>sp|GLYA_SULTO|SERINE hydroxymethyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PGPQGSS 8
PGPQG +
Sbjct: 231 PGPQGGA 237


>sp|GLYA_SACI7|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 PGPQGSS 8
PGPQG +
Sbjct: 230 PGPQGGA 236


>sp|GLYA_SACI6|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PGPQGSS 8
PGPQG +
Sbjct: 230 PGPQGGA 236


>sp|GLYA_SACI4|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PGPQGSS 8
PGPQG +
Sbjct: 230 PGPQGGA 236


>sp|GLYA_SACI3|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 2 PGPQGSS 8
PGPQG +
Sbjct: 230 PGPQGGA 236


>sp|GLYA_SACI1|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 PGPQGSS 8
PGPQG +
Sbjct: 230 PGPQGGA 236


>sp|GLYA_PYRAR|SERINE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PGPQG 6
PGPQG
Sbjct: 229 PGPQG 233


>sp|GLYA_PYRNV|SERINE hydroxymethyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PGPQG 6
PGPQG
Sbjct: 229 PGPQG 233


>sp|GLYA_AERPE|SERINE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PGPQGSS 8
PGPQG +
Sbjct: 236 PGPQGGA 242


>sp|GLYA_SULAC|SERINE hydroxymethyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 PGPQG 6
PGPQG
Sbjct: 231 PGPQG 235


>sp|GLYA_METTM|SERINE hydroxymethyltransferase|Methanothermobacter marburgensis (strain

Query: 2 PGPQG 6
PGPQG
Sbjct: 230 PGPQG 234


>sp|GLYA_METS3|SERINE hydroxymethyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 PGPQG 6
PGPQG
Sbjct: 230 PGPQG 234


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 KPGPQG 6
KPGP G
Sbjct: 362 KPGPMG 367


>sp|GLYA_PYRCJ|SERINE hydroxymethyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PGPQG 6
PGPQG
Sbjct: 229 PGPQG 233


>sp|GLYA_HYPBU|SERINE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 PGPQG 6
PGPQG
Sbjct: 239 PGPQG 243


>sp|HELS_METTH|ATP-DEPENDENT DNA helicase Hel308|Methanothermobacter thermautotrophicus (strain

Query: 2 PGPQGSSG 9
PGP+G S
Sbjct: 477 PGPEGFSA 484


>sp|GLYA_METST|SERINE hydroxymethyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 2 PGPQG 6
PGPQG
Sbjct: 229 PGPQG 233


>sp|GLYA_CALMQ|SERINE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 2 PGPQG 6
PGPQG
Sbjct: 232 PGPQG 236


>sp|ARFB_METS3|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanobrevibacter smithii (strain

Query: 3 GPQGSSGD 10
GP G SG+
Sbjct: 141 GPHGGSGE 148


>sp|GLYA_THEON|SERINE hydroxymethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 PGPQG 6
PGPQG
Sbjct: 231 PGPQG 235


>sp|GLYA_THEGJ|SERINE hydroxymethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 2 PGPQG 6
PGPQG
Sbjct: 229 PGPQG 233


>sp|GLYA_PYRHO|SERINE hydroxymethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PGPQG 6
PGPQG
Sbjct: 229 PGPQG 233


>sp|GLYA_PYRFU|SERINE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PGPQG 6
PGPQG
Sbjct: 229 PGPQG 233


>sp|GLYA_PYRAB|SERINE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 PGPQG 6
PGPQG
Sbjct: 229 PGPQG 233


>sp|GLYA_THEKO|SERINE hydroxymethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 PGPQG 6
PGPQG
Sbjct: 231 PGPQG 235


>sp|GLYA_METKA|SERINE hydroxymethyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 PGPQG 6
PGPQG
Sbjct: 229 PGPQG 233


>sp|ARFB_METRM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanobrevibacter ruminantium (strain

Query: 3 GPQGSSGD 10
GP G SG+
Sbjct: 141 GPHGGSGE 148


>sp|RS5_METMJ|SMALL ribosomal subunit protein uS5|Methanoculleus marisnigri (strain

Query: 1 KPGPQG 6
KP PQG
Sbjct: 145 KPAPQG 150




105|Sequence|521|530|GSSGDPGPPG

>sp|TRMY_METM7|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 4 GDPGPP 9
GDP PP
Sbjct: 58 GDPNPP 63


>sp|PCNA_METMJ|DNA polymerase sliding clamp|Methanoculleus marisnigri (strain ATCC

Query: 5 DPGPPG 10
DP PPG
Sbjct: 119 DPNPPG 124


>sp|Y520_METJA|PUTATIVE NADH-ubiquinone oxidoreductase MJ0520|Methanocaldococcus

Query: 4 GDPGPP 9
G PGPP
Sbjct: 38 GRPGPP 43


>sp|RFCL_METAC|REPLICATION factor C large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 GSSGDPGPPG 10
GS+G PPG
Sbjct: 476 GSAGKSDPPG 485


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 SGDPGPPG 10
+G+P PPG
Sbjct: 469 NGNPAPPG 476


>sp|COXX1_CENSY|PROTOHEME IX farnesyltransferase 1|Cenarchaeum symbiosum (strain A)

Query: 2 SSGDPGP 8
S+G+PGP
Sbjct: 33 SAGEPGP 39


>sp|RL11_METKA|LARGE ribosomal subunit protein uL11|Methanopyrus kandleri (strain AV19

Query: 1 GSSGDPGPP 9
G DPGPP
Sbjct: 12 GGKADPGPP 20


>sp|FAU1_IGNH4|PROBABLE ribonuclease FAU-1|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GSSGDPGPP 9
G G P PP
Sbjct: 39 GHEGSPEPP 47


>sp|DNAJ_METAC|CHAPERONE protein DnaJ|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GSSGDPGPP 9
G SG+PG P
Sbjct: 236 GDSGEPGAP 244


>sp|Y2791_METMA|UPF0758 protein MM_2791|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 SGDPGP 8
SGDP P
Sbjct: 181 SGDPSP 186


>sp|Y2303_METBF|UPF0758 protein Mbar_A2303|Methanosarcina barkeri (strain Fusaro /

Query: 3 SGDPGP 8
SGDP P
Sbjct: 181 SGDPSP 186


>sp|Y1979_METAC|UPF0758 protein MA_1979|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 SGDPGP 8
SGDP P
Sbjct: 181 SGDPSP 186


>sp|Y382_METBU|UPF0758 protein Mbur_0382|Methanococcoides burtonii (strain DSM 6242

Query: 3 SGDPGP 8
SGDP P
Sbjct: 181 SGDPAP 186


>sp|CBIH_METTH|PROBABLE cobalt-factor III C(17)-methyltransferase|Methanothermobacter

Query: 2 SSGDPGPPG 10
SSGDPG G
Sbjct: 76 SSGDPGVYG 84


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 4 GDPGPP 9
GDP PP
Sbjct: 516 GDPSPP 521


>sp|DNAJ_METTE|CHAPERONE protein DnaJ|Methanosarcina thermophila

Query: 1 GSSGDPGPP 9
G +GDPG P
Sbjct: 235 GDAGDPGAP 243


>sp|GGGPS_THEPD|GERANYLGERANYLGLYCERYL phosphate synthase|Thermofilum pendens (strain DSM 2475

Query: 1 GSSGDPGPP 9
GS G+P PP
Sbjct: 177 GSGGEPVPP 185


>sp|RRP42_METKA|EXOSOME complex component Rrp42|Methanopyrus kandleri (strain AV19 /

Query: 3 SGDPGPP 9
S +PGPP
Sbjct: 92 SFEPGPP 98


>sp|GLCD2_PICTO|GLUCOSE/GALACTOSE 1-dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 2 SSGDPG 7
+SGDPG
Sbjct: 250 TSGDPG 255


>sp|RL11_HALSA|LARGE ribosomal subunit protein uL11|Halobacterium salinarum (strain

Query: 1 GSSGDPGPP 9
G DPGPP
Sbjct: 11 GGQADPGPP 19


>sp|RL11_HALS3|LARGE ribosomal subunit protein uL11|Halobacterium salinarum (strain

Query: 1 GSSGDPGPP 9
G DPGPP
Sbjct: 11 GGQADPGPP 19


>sp|MUTS2_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 1 GSSGDPGPPG 10
GSSG GP G
Sbjct: 253 GSSGAVGPDG 262


>sp|AATA_NANEQ|A-TYPE ATP synthase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GSSGDPGPPG 10
GS+ PGP G
Sbjct: 217 GSAAVPGPFG 226


>sp|TRPA_METMP|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain DSM 14266

Query: 3 SGDPGP 8
SGDP P
Sbjct: 12 SGDPNP 17


>sp|AROA_METMA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosarcina mazei (strain ATCC

Query: 1 GSSGDPGPP 9
GS+G PG P
Sbjct: 72 GSNGKPGIP 80


>sp|TRPA_METM7|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C7 /

Query: 3 SGDPGP 8
SGDP P
Sbjct: 12 SGDPNP 17


>sp|TRPA_METM5|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C5 /

Query: 3 SGDPGP 8
SGDP P
Sbjct: 12 SGDPNP 17


>sp|TRPA_METM6|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C6 /

Query: 3 SGDPGP 8
SGDP P
Sbjct: 12 SGDPNP 17


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 SGDPGPPG 10
+G+P PPG
Sbjct: 469 NGNPVPPG 476


>sp|RL11_NATPD|LARGE ribosomal subunit protein uL11|Natronomonas pharaonis (strain

Query: 1 GSSGDPGPP 9
G DPGPP
Sbjct: 11 GGQADPGPP 19




106|Sequence|526|535|PGPPGPPGKE

>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 1 PGPPGPPGK 9
P P GPP K
Sbjct: 17 PQPEGPPEK 25


>sp|TRMY_METM5|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 2 GPPGPP 7
GPP PP
Sbjct: 58 GPPNPP 63


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PGPPGPPGK 9
PG P PP K
Sbjct: 510 PGRPSPPFK 518


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PGPPGPPGK 9
PG P PP K
Sbjct: 510 PGRPSPPFK 518


>sp|Y520_METJA|PUTATIVE NADH-ubiquinone oxidoreductase MJ0520|Methanocaldococcus

Query: 2 GPPGPP 7
G PGPP
Sbjct: 38 GRPGPP 43


>sp|RS3A_AERPE|SMALL ribosomal subunit protein eS1|Aeropyrum pernix (strain ATCC 700893

Query: 1 PGPPGP 6
PGP GP
Sbjct: 195 PGPNGP 200


>sp|TRMY_PYRHO|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus horikoshii

Query: 2 GPPGPP 7
GPP PP
Sbjct: 58 GPPSPP 63


>sp|DNAG_METJA|DNA primase DnaG|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 GPPGKE 10
PPGKE
Sbjct: 243 APPGKE 248


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 PPGPPGKE 10
PPG P KE
Sbjct: 406 PPGTPAKE 413


>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 3 PPGPPGKE 10
PPGP E
Sbjct: 55 PPGPTSHE 62


>sp|DNAG_PYRIL|DNA primase DnaG|Pyrobaculum islandicum (strain DSM 4184

Query: 5 GPPGKE 10
PPGKE
Sbjct: 246 APPGKE 251


>sp|TRMY_PYRAB|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus abyssi

Query: 2 GPPGPP 7
GPP PP
Sbjct: 58 GPPDPP 63


>sp|DNAG_PYRCJ|DNA primase DnaG|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 GPPGKE 10
PPGKE
Sbjct: 246 APPGKE 251


>sp|Y1659_ARCFU|UNCHARACTERIZED protein AF_1659|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGPPGPPGK 9
PG PG GK
Sbjct: 61 PGEPGEDGK 69


>sp|DNAG_PYRNV|DNA primase DnaG|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 GPPGKE 10
PPGKE
Sbjct: 246 APPGKE 251


>sp|DNAG_IGNH4|DNA primase DnaG|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 GPPGKE 10
PPGKE
Sbjct: 239 APPGKE 244


>sp|DNAG_PYRAE|DNA primase DnaG|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 GPPGKE 10
PPGKE
Sbjct: 246 APPGKE 251


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 PGPPGPP 7
PG P PP
Sbjct: 515 PGDPSPP 521


>sp|DNAG_PYRAR|DNA primase DnaG|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 GPPGKE 10
PPGKE
Sbjct: 246 APPGKE 251


>sp|RRP42_METAC|EXOSOME complex component Rrp42|Methanosarcina acetivorans (strain ATCC

Query: 4 PGPPGKE 10
PGPP +E
Sbjct: 97 PGPPREE 103




107|Sequence|531|540|PPGKEGLPGP

>sp|Y759_ARCFU|UNCHARACTERIZED protein AF_0759|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PPGKEGLPGP 10
PPG +G P P
Sbjct: 99 PPGLQGNPNP 108


>sp|RNZ_SULAC|RIBONUCLEASE Z|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PGKEGLPG 9
P K GLPG
Sbjct: 14 PNKRGLPG 21


>sp|TOP6B_PYRAE|TYPE 2 DNA topoisomerase 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PPGKEGLPGP 10
P KEGLP P
Sbjct: 220 PAPKEGLPHP 229


>sp|SYE_METTM|GLUTAMATE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 5 EGLPGP 10
EGLPGP
Sbjct: 415 EGLPGP 420


>sp|AATB_PICTO|A-TYPE ATP synthase subunit B|Picrophilus torridus (strain ATCC 700027

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 269 PGRRGYPG 276


>sp|BRIX_METTH|PROBABLE Brix domain-containing ribosomal biogenesis|Methanothermobacter

Query: 1 PPGKEGL 7
PPG EGL
Sbjct: 97 PPGSEGL 103


>sp|IF2A_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 2 PGKEGL 7
PGKEG+
Sbjct: 35 PGKEGM 40


>sp|AATB_NITMS|A-TYPE ATP synthase subunit B|Nitrosopumilus maritimus (strain SCM1)

Query: 2 PGKEGLPG 9
PG++G PG
Sbjct: 272 PGRKGYPG 279


>sp|AATB_CENSY|A-TYPE ATP synthase subunit B|Cenarchaeum symbiosum (strain A)

Query: 2 PGKEGLPG 9
PG++G PG
Sbjct: 272 PGRKGYPG 279


>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 792 PGRRGYPG 799


>sp|AATB_HYPBU|A-TYPE ATP synthase subunit B|Hyperthermus butylicus (strain DSM 5456

Query: 2 PGKEGLPG 9
PG++G PG
Sbjct: 276 PGRQGYPG 283


>sp|HEM1_NATPD|GLUTAMYL-TRNA reductase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PPGKEGLP 8
P G EG+P
Sbjct: 426 PDGPEGVP 433


>sp|AATB_AERPE|A-TYPE ATP synthase subunit B|Aeropyrum pernix (strain ATCC 700893

Query: 2 PGKEGLPG 9
PG++G PG
Sbjct: 271 PGRQGYPG 278


>sp|GATD_THEKO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermococcus kodakarensis (strain ATCC

Query: 2 PGKEGLP 8
P KEGLP
Sbjct: 88 PRKEGLP 94


>sp|AATB_THEAC|A-TYPE ATP synthase subunit B|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 269 PGRRGYPG 276


>sp|GSA_METS5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PPGKEGLPG 9
PP K+ LPG
Sbjct: 208 PPEKDFLPG 216


>sp|AATB_THEVO|A-TYPE ATP synthase subunit B|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 269 PGRRGYPG 276


>sp|TBP_AERPE|TATA-BOX-BINDING protein|Aeropyrum pernix (strain ATCC 700893

Query: 3 GKEGLPGP 10
G EGLP P
Sbjct: 14 GVEGLPKP 21


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PGKEGLP 8
PG EGLP
Sbjct: 86 PGIEGLP 92


>sp|AATB_HALLT|A-TYPE ATP synthase subunit B|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 274 PGRRGYPG 281


>sp|SYE_PYRAE|GLUTAMATE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PGKEGLP 8
PG EGLP
Sbjct: 86 PGLEGLP 92


>sp|AROB_PYRCJ|3-DEHYDROQUINATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 KEGLPGP 10
+EGLP P
Sbjct: 35 EEGLPSP 41


>sp|AATB_META3|A-TYPE ATP synthase subunit B|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 273 PGRRGYPG 280


>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 275 PGRRGYPG 282


>sp|AATB_HALMA|A-TYPE ATP synthase subunit B|Haloarcula marismortui (strain ATCC 43049

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 273 PGRRGYPG 280


>sp|AATB2_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 274 PGRRGYPG 281


>sp|GCH32_HALSA|GTP cyclohydrolase III 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 PPGKEGLPG 9
PPG G PG
Sbjct: 122 PPGFAGTPG 130


>sp|AATB_METPE|A-TYPE ATP synthase subunit B|Methanosphaerula palustris (strain ATCC

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 266 PGRRGYPG 273


>sp|RS4E_NATPD|SMALL ribosomal subunit protein eS4|Natronomonas pharaonis (strain ATCC

Query: 1 PPGKEGLP 8
P G+EG+P
Sbjct: 31 PHGEEGVP 38


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PGKEGLPG 9
PG+EG P
Sbjct: 532 PGEEGYPA 539


>sp|AATB_PYRHO|A-TYPE ATP synthase subunit B|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 271 PGRRGYPG 278


>sp|AATB_PYRFU|A-TYPE ATP synthase subunit B|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 268 PGRRGYPG 275


>sp|AATB_METST|A-TYPE ATP synthase subunit B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 274 PGRRGYPG 281


>sp|AATB_METAR|A-TYPE ATP synthase subunit B|Methanocella arvoryzae (strain DSM 22066

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 266 PGRRGYPG 273


>sp|AATB_PYRAB|A-TYPE ATP synthase subunit B|Pyrococcus abyssi (strain GE5 /

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 268 PGRRGYPG 275


>sp|ENDA_HALVD|TRNA-SPLICING endonuclease|Haloferax volcanii (strain ATCC 29605

Query: 2 PGKEGLPG 9
P +EG PG
Sbjct: 87 PAREGWPG 94


>sp|AATB_METTH|A-TYPE ATP synthase subunit B|Methanothermobacter thermautotrophicus

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 273 PGRRGYPG 280


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PGKEGLPG 9
PG+EG P
Sbjct: 520 PGEEGYPA 527


>sp|AATB_METM7|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C7 /

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 273 PGRRGYPG 280


>sp|AATB_THEON|A-TYPE ATP synthase subunit B|Thermococcus onnurineus (strain NA1)

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 271 PGRRGYPG 278


>sp|AATB_THEKO|A-TYPE ATP synthase subunit B|Thermococcus kodakarensis (strain ATCC

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 271 PGRRGYPG 278


>sp|AATB_METS3|A-TYPE ATP synthase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 273 PGRRGYPG 280


>sp|AATB_METMP|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain DSM 14266

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 273 PGRRGYPG 280


>sp|AATB_METM6|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C6 /

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 273 PGRRGYPG 280


>sp|GVPO1_HALSA|GAS vesicle protein O1|Halobacterium salinarum (strain ATCC 700922

Query: 1 PPGKEGLPGP 10
PP +G P P
Sbjct: 21 PPASDGNPSP 30


>sp|AATB_THESI|A-TYPE ATP synthase subunit B|Thermococcus sp. (strain KI)

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 269 PGRRGYPG 276


>sp|AATB_THEGJ|A-TYPE ATP synthase subunit B|Thermococcus gammatolerans (strain DSM 15229

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 269 PGRRGYPG 276


>sp|AATB_METMJ|A-TYPE ATP synthase subunit B|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 266 PGRRGYPG 273


>sp|AATB_METM5|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C5 /

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 273 PGRRGYPG 280


>sp|AATB_HALVD|A-TYPE ATP synthase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 271 PGRRGYPG 278


>sp|AATB3_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 272 PGRRGYPG 279


>sp|DNAK_METBU|CHAPERONE protein DnaK|Methanococcoides burtonii (strain DSM 6242

Query: 1 PPGKEGLP 8
PP GLP
Sbjct: 437 PPAPRGLP 444


>sp|AATB_HALSA|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 700922

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 274 PGRRGYPG 281


>sp|AATB_HALS3|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 29341

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 274 PGRRGYPG 281


>sp|AATB_DESSY|A-TYPE ATP synthase subunit B|Desulfurococcus sp. (strain SY)

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 269 PGRRGYPG 276


>sp|AATB_METVS|A-TYPE ATP synthase subunit B|Methanococcus vannielii (strain ATCC 35089

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 273 PGRRGYPG 280


>sp|AATB_ARCFU|A-TYPE ATP synthase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 266 PGRRGYPG 273


>sp|AATB_METBU|A-TYPE ATP synthase subunit B|Methanococcoides burtonii (strain DSM 6242

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 267 PGRRGYPG 274


>sp|AATB_NATPD|A-TYPE ATP synthase subunit B|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 274 PGRRGYPG 281


>sp|AATB_METMA|A-TYPE ATP synthase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 267 PGRRGYPG 274


>sp|AATB_METBF|A-TYPE ATP synthase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 267 PGRRGYPG 274


>sp|AATB_METAC|A-TYPE ATP synthase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 267 PGRRGYPG 274


>sp|HISX_ARCFU|HISTIDINOL dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PPGKEGLPGP 10
PP K+G P
Sbjct: 146 PPNKDGKVNP 155


>sp|AATB_METBA|A-TYPE ATP synthase subunit B|Methanosarcina barkeri

Query: 2 PGKEGLPG 9
PG+ G PG
Sbjct: 267 PGRRGYPG 274


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PGKEGLPG 9
PG+EG P
Sbjct: 344 PGEEGYPA 351


>sp|TDXH2_THEAC|PEROXIREDOXIN 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PGKEGLPG 9
PG+EG+ G
Sbjct: 166 PGQEGIEG 173


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PGKEGLPG 9
PG+EG P
Sbjct: 349 PGEEGYPA 356


>sp|HIS5_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 1 PPGKEGL 7
PGKEGL
Sbjct: 87 SPGKEGL 93




108|Sequence|536|545|GLPGPQGPPG

>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 3 PGPQGPP 9
P P+GPP
Sbjct: 17 PQPEGPP 23


>sp|IPK_THEAC|ISOPENTENYL phosphate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GLPGPQGP 8
GLPGP+ P
Sbjct: 57 GLPGPKNP 64


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PGPQGPP 9
P P GPP
Sbjct: 100 PNPNGPP 106


>sp|RS3A_AERPE|SMALL ribosomal subunit protein eS1|Aeropyrum pernix (strain ATCC 700893

Query: 2 LPGPQGP 8
+PGP GP
Sbjct: 194 VPGPNGP 200


>sp|Y1232_METJA|UNCHARACTERIZED protein MJ1232|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLPGPQG 7
G+PGP+G
Sbjct: 56 GVPGPKG 62


>sp|PYLC_METAC|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GLPGPQGPPG 10
G+P PQ PG
Sbjct: 115 GIPTPQDKPG 124


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PGPQGPP 9
P P GPP
Sbjct: 110 PNPNGPP 116


>sp|GLYA_METTM|SERINE hydroxymethyltransferase|Methanothermobacter marburgensis (strain

Query: 2 LPGPQG 7
PGPQG
Sbjct: 229 FPGPQG 234


>sp|GLYA_METTH|SERINE hydroxymethyltransferase|Methanothermobacter thermautotrophicus

Query: 2 LPGPQG 7
PGPQG
Sbjct: 229 FPGPQG 234


>sp|GLYA_METST|SERINE hydroxymethyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 2 LPGPQG 7
PGPQG
Sbjct: 228 FPGPQG 233


>sp|GLYA_METS3|SERINE hydroxymethyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 LPGPQG 7
PGPQG
Sbjct: 229 FPGPQG 234


>sp|GLYA_STAMF|SERINE hydroxymethyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 2 LPGPQG 7
PGPQG
Sbjct: 234 FPGPQG 239


>sp|GLYA_SACS2|SERINE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 2 LPGPQG 7
PGPQG
Sbjct: 229 FPGPQG 234


>sp|RS3A_IGNH4|SMALL ribosomal subunit protein eS1|Ignicoccus hospitalis (strain KIN4/I

Query: 2 LPGPQGP 8
+P P+GP
Sbjct: 195 MPSPEGP 201


>sp|GLYA_SACI7|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 LPGPQG 7
PGPQG
Sbjct: 229 FPGPQG 234


>sp|GLYA_SACI3|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 2 LPGPQG 7
PGPQG
Sbjct: 229 FPGPQG 234


>sp|GLYA_SACI2|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 2 LPGPQG 7
PGPQG
Sbjct: 229 FPGPQG 234


>sp|GLYA_SACI1|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 LPGPQG 7
PGPQG
Sbjct: 229 FPGPQG 234


>sp|KAE1B_METAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 GLPGPQGP 8
GLP P GP
Sbjct: 173 GLPHPGGP 180


>sp|GLYA_SACI4|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LPGPQG 7
PGPQG
Sbjct: 229 FPGPQG 234


>sp|RS3A_DESA1|SMALL ribosomal subunit protein eS1|Desulfurococcus amylolyticus (strain

Query: 2 LPGPQGP 8
+P P+GP
Sbjct: 193 IPSPEGP 199


>sp|ADH_SACS2|NAD-DEPENDENT alcohol dehydrogenase|Saccharolobus solfataricus (strain ATCC

Query: 1 GLPGPQGP 8
G+P P+GP
Sbjct: 19 GVPKPKGP 26


>sp|GLYA_SACI6|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LPGPQG 7
PGPQG
Sbjct: 229 FPGPQG 234


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PGPQGPP 9
P P GPP
Sbjct: 107 PNPNGPP 113


>sp|GLYA_PYRIL|SERINE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 LPGPQG 7
PGPQG
Sbjct: 228 FPGPQG 233


>sp|GLYA_SULAC|SERINE hydroxymethyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 LPGPQG 7
PGPQG
Sbjct: 230 FPGPQG 235


>sp|GLYA_METS5|SERINE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 2 LPGPQG 7
PGPQG
Sbjct: 229 FPGPQG 234


>sp|CBID_METTH|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanothermobacter thermautotrophicus

Query: 3 PGPQGPPG 10
PG Q PPG
Sbjct: 104 PGLQVPPG 111


>sp|GLYA_PYRAE|SERINE hydroxymethyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LPGPQG 7
PGPQG
Sbjct: 228 FPGPQG 233


>sp|GLYA_PYRNV|SERINE hydroxymethyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 LPGPQG 7
PGPQG
Sbjct: 228 FPGPQG 233


>sp|KAE1B_METMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 GLPGPQGP 8
GLP P GP
Sbjct: 173 GLPHPGGP 180


>sp|KAE1B_PICTO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 GLPGPQGP 8
G+P P GP
Sbjct: 167 GIPFPGGP 174


>sp|GLYA_SULTO|SERINE hydroxymethyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LPGPQG 7
PGPQG
Sbjct: 230 FPGPQG 235


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 1 GLPGPQGPPG 10
G GP GP G
Sbjct: 214 GHKGPMGPTG 223


>sp|KAE1B_THEVO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 GLPGPQGP 8
G+P P GP
Sbjct: 167 GIPFPGGP 174


>sp|KAE1B_THEAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 GLPGPQGP 8
G+P P GP
Sbjct: 167 GIPFPGGP 174


>sp|GLYA_PYRAR|SERINE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LPGPQG 7
PGPQG
Sbjct: 228 FPGPQG 233


>sp|GLYA_CALMQ|SERINE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 2 LPGPQG 7
PGPQG
Sbjct: 231 FPGPQG 236


>sp|GLYA_AERPE|SERINE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LPGPQG 7
PGPQG
Sbjct: 235 FPGPQG 240


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 4 GPQGPPG 10
GP+G PG
Sbjct: 440 GPEGHPG 446


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 4 GPQGPPG 10
GP+G PG
Sbjct: 440 GPEGHPG 446


>sp|GLYA_PYRCJ|SERINE hydroxymethyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 LPGPQG 7
PGPQG
Sbjct: 228 FPGPQG 233


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GLPGPQG 7
G PGP+G
Sbjct: 185 GYPGPEG 191


>sp|KAE1B_METHJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 GLPGPQGP 8
GLP P GP
Sbjct: 165 GLPHPGGP 172


>sp|MTD_METHJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanospirillum

Query: 2 LPGPQG 7
LPGP+G
Sbjct: 72 LPGPKG 77


>sp|G6PI_HALMA|PROBABLE glucose-6-phosphate isomerase|Haloarcula marismortui (strain ATCC

Query: 2 LPGPQGPPG 10
LP P+G PG
Sbjct: 181 LPVPEGVPG 189


>sp|THII_THEAC|TRNA sulfurtransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LPGPQGPP 9
+PGP G P
Sbjct: 157 IPGPGGLP 164


>sp|GLYA_HYPBU|SERINE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 LPGPQG 7
PGPQG
Sbjct: 238 FPGPQG 243


>sp|GLYA_METAR|SERINE hydroxymethyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LPGPQG 7
PGPQG
Sbjct: 227 FPGPQG 232


>sp|SYE_METAR|GLUTAMATE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 PGPQGPP 9
P P GPP
Sbjct: 112 PNPNGPP 118


>sp|KAE1_METTP|TRNA N6-adenosine threonylcarbamoyltransferase|Methanothrix

Query: 1 GLPGPQGP 8
GLP P GP
Sbjct: 167 GLPHPGGP 174


>sp|GLYA_THEON|SERINE hydroxymethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 LPGPQG 7
PGPQG
Sbjct: 230 FPGPQG 235


>sp|RFCL_METMA|REPLICATION factor C large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PGPQGP 8
PGPQ P
Sbjct: 480 PGPQSP 485


>sp|GLYA_PYRHO|SERINE hydroxymethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LPGPQG 7
PGPQG
Sbjct: 228 FPGPQG 233


>sp|GLYA_PYRFU|SERINE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LPGPQG 7
PGPQG
Sbjct: 228 FPGPQG 233


>sp|GLYA_METKA|SERINE hydroxymethyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 LPGPQG 7
PGPQG
Sbjct: 228 FPGPQG 233


>sp|GLYA_THEGJ|SERINE hydroxymethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 2 LPGPQG 7
PGPQG
Sbjct: 228 FPGPQG 233


>sp|GLYA_PYRAB|SERINE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 LPGPQG 7
PGPQG
Sbjct: 228 FPGPQG 233


>sp|ILVD_METST|DIHYDROXY-ACID dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 GPQGPPG 10
GP+G PG
Sbjct: 432 GPKGGPG 438


>sp|GLYA_THEKO|SERINE hydroxymethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 LPGPQG 7
PGPQG
Sbjct: 230 FPGPQG 235


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GPQGPPG 10
GP+G PG
Sbjct: 430 GPKGAPG 436


>sp|ILVD_HALMA|DIHYDROXY-ACID dehydratase|Haloarcula marismortui (strain ATCC 43049

Query: 4 GPQGPPG 10
GPQG PG
Sbjct: 451 GPQGGPG 457


>sp|RNP4_AERPE|RIBONUCLEASE P protein component 4|Aeropyrum pernix (strain ATCC 700893

Query: 4 GPQGPP 9
GPQGPP
Sbjct: 138 GPQGPP 143


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 2 LPGPQGPPG 10
LP P+ PP
Sbjct: 530 LPEPEKPPA 538


>sp|HAH4_HALMT|HALOCIN-H4 mediterranei (strain ATCC 33500

Query: 3 PGPQGPP 9
PGP G P
Sbjct: 51 PGPNGDP 57


>sp|Y609_METTH|UPF0179 protein MTH_609|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GLPGPQGPPG 10
G PG Q P G
Sbjct: 124 GKPGKQCPAG 133


>sp|THII_METTH|PROBABLE tRNA sulfurtransferase|Methanothermobacter thermautotrophicus

Query: 2 LPGPQGPPG 10
+PGP G P
Sbjct: 166 IPGPGGLPA 174


>sp|RS12_METJA|SMALL ribosomal subunit protein uS12|Methanocaldococcus jannaschii

Query: 1 GLPGPQGP 8
G+ GP+GP
Sbjct: 107 GIGGPKGP 114


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PGPQGPP 9
PG GPP
Sbjct: 451 PGTNGPP 457




109|Sequence|541|550|QGPPGFQGLQ

>sp|GLNA_PYRFU|GLUTAMINE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PGFQGLQ 10
PGFQG++
Sbjct: 54 PGFQGIE 60


>sp|Y759_ARCFU|UNCHARACTERIZED protein AF_0759|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PPGFQG 8
PPG QG
Sbjct: 99 PPGLQG 104


>sp|GLNA_PYRWO|GLUTAMINE synthetase|Pyrococcus woesei

Query: 4 PGFQGLQ 10
PGFQG++
Sbjct: 54 PGFQGIE 60


>sp|GLNA_PYRHO|GLUTAMINE synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PGFQGLQ 10
PGFQG++
Sbjct: 58 PGFQGIE 64


>sp|GYAR_KORCO|GLYOXYLATE reductase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 PPGFQ 7
PPGFQ
Sbjct: 328 PPGFQ 332


>sp|GLNA_PYRAB|GLUTAMINE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 4 PGFQGLQ 10
PGFQG++
Sbjct: 54 PGFQGIE 60


>sp|AQPM_ARCFU|PROBABLE aquaporin AqpM|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QGPPGFQGL 9
+ PPGF GL
Sbjct: 170 RAPPGFAGL 178


>sp|TRUD_ARCFU|PROBABLE tRNA pseudouridine synthase D|Archaeoglobus fulgidus (strain ATCC

Query: 1 QGPPGFQGLQ 10
+G P F GLQ
Sbjct: 153 KGTPNFFGLQ 162


>sp|RS6E_SACI6|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 GPPGF 6
GPPGF
Sbjct: 179 GPPGF 183


>sp|RS6E_SACI3|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 GPPGF 6
GPPGF
Sbjct: 179 GPPGF 183


>sp|RS6E_SACI2|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 GPPGF 6
GPPGF
Sbjct: 179 GPPGF 183


>sp|RS6E_STAMF|SMALL ribosomal subunit protein eS6|Staphylothermus marinus (strain ATCC

Query: 2 GPPGFQ 7
GPPGF
Sbjct: 180 GPPGFH 185


>sp|RS6E_SACI7|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 GPPGF 6
GPPGF
Sbjct: 179 GPPGF 183


>sp|RS6E_SACI4|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 GPPGF 6
GPPGF
Sbjct: 179 GPPGF 183


>sp|RS6E_SACS2|SMALL ribosomal subunit protein eS6|Saccharolobus solfataricus (strain

Query: 2 GPPGF 6
GPPGF
Sbjct: 179 GPPGF 183


>sp|RS6E_HYPBU|SMALL ribosomal subunit protein eS6|Hyperthermus butylicus (strain DSM

Query: 2 GPPGFQ 7
GPPGF
Sbjct: 178 GPPGFH 183


>sp|RS6E_SULTO|SMALL ribosomal subunit protein eS6|Sulfurisphaera tokodaii (strain DSM

Query: 2 GPPGF 6
GPPGF
Sbjct: 178 GPPGF 182


>sp|PROA_METMA|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QGPPGFQGL 9
+GP G +GL
Sbjct: 401 RGPVGMEGL 409


>sp|PROA_METBU|GAMMA-GLUTAMYL phosphate reductase|Methanococcoides burtonii (strain DSM 6242

Query: 1 QGPPGFQGL 9
+GP G +GL
Sbjct: 401 RGPVGMEGL 409


>sp|PROA_METBF|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QGPPGFQGL 9
+GP G +GL
Sbjct: 401 RGPVGMEGL 409


>sp|PROA_METAC|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QGPPGFQGL 9
+GP G +GL
Sbjct: 401 RGPVGMEGL 409


>sp|GCH32_HALSA|GTP cyclohydrolase III 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 QGPPGFQG 8
+ PPGF G
Sbjct: 120 RSPPGFAG 127


>sp|BRIX_METTH|PROBABLE Brix domain-containing ribosomal biogenesis|Methanothermobacter

Query: 3 PPGFQGL 9
PPG +GL
Sbjct: 97 PPGSEGL 103


>sp|RS6E_METS5|SMALL ribosomal subunit protein eS6|Metallosphaera sedula (strain ATCC

Query: 2 GPPGF 6
GPPGF
Sbjct: 177 GPPGF 181


>sp|RS6E_AERPE|SMALL ribosomal subunit protein eS6|Aeropyrum pernix (strain ATCC 700893

Query: 2 GPPGFQ 7
GPPGF
Sbjct: 187 GPPGFH 192


>sp|RNZ_HALVD|RIBONUCLEASE Z|Haloferax volcanii (strain ATCC 29605

Query: 1 QGPPGFQG 8
GPPG +G
Sbjct: 89 HGPPGSKG 96




110|Sequence|546|555|FQGLQGTVGE

>sp|RL21_AERPE|LARGE ribosomal subunit protein eL21|Aeropyrum pernix (strain ATCC

Query: 1 FQGLQGTV 8
F GL GTV
Sbjct: 60 FHGLTGTV 67


>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 1 FQGLQGTVGE 10
FQ L+G V E
Sbjct: 234 FQSLRGDVSE 243


>sp|FLUC1_HALMA|FLUORIDE-SPECIFIC ion channel FluC 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 FQGLQGTV 8
F GLQGT+
Sbjct: 34 FPGLQGTL 41




111|Sequence|551|560|GTVGEPGVPG

>sp|DACZ_METJA|DIADENYLATE cyclase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GTVGEPGVPG 10
VGEP PG
Sbjct: 119 AVVGEPKTPG 128


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 3 VGEPGVPG 10
+GEPGV G
Sbjct: 400 IGEPGVVG 407


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 VGEPGVPG 10
+GEPGV G
Sbjct: 400 IGEPGVVG 407


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 VGEPGVPG 10
+GEPGV G
Sbjct: 400 IGEPGVVG 407


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 VGEPGVPG 10
+GEPGV G
Sbjct: 400 IGEPGVVG 407


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 VGEPGVPG 10
+GEPGV G
Sbjct: 400 IGEPGVVG 407


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 VGEPGVPG 10
+GEPGV G
Sbjct: 400 IGEPGVVG 407


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 VGEPGVPG 10
+GEPGV G
Sbjct: 400 IGEPGVVG 407


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 3 VGEPGVPG 10
+GEPGV G
Sbjct: 400 IGEPGVVG 407


>sp|PRIL_HALMA|DNA primase large subunit PriL|Haloarcula marismortui (strain ATCC

Query: 1 GTVGEP 6
GTVGEP
Sbjct: 50 GTVGEP 55


>sp|DNAJ_METMZ|CHAPERONE protein DnaJ|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 GTVGEPGVP 9
G GEPG P
Sbjct: 236 GDAGEPGAP 244


>sp|DNAJ_METMA|CHAPERONE protein DnaJ|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GTVGEPGVP 9
G GEPG P
Sbjct: 236 GDAGEPGAP 244


>sp|PRIL_HALSA|DNA primase large subunit PriL|Halobacterium salinarum (strain ATCC

Query: 1 GTVGEPG 7
GT+GEP
Sbjct: 50 GTIGEPA 56


>sp|PRIL_HALS3|DNA primase large subunit PriL|Halobacterium salinarum (strain ATCC

Query: 1 GTVGEPG 7
GT+GEP
Sbjct: 50 GTIGEPA 56


>sp|SYFB_THEAC|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GTVGEPGVP 9
G V EPG P
Sbjct: 302 GYVAEPGYP 310


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VGEPGVP 9
+G+PG+P
Sbjct: 48 IGKPGIP 54


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VGEPGVP 9
+G+PG+P
Sbjct: 48 IGKPGIP 54


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 VGEPGVP 9
+G+PG+P
Sbjct: 48 IGKPGIP 54


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 VGEPGVP 9
+G+PG+P
Sbjct: 48 IGKPGIP 54


>sp|SYFB_THEVO|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GTVGEPGVP 9
G V EPG P
Sbjct: 301 GYVAEPGYP 309


>sp|PRIS_SACS2|DNA primase small subunit PriS|Saccharolobus solfataricus (strain ATCC

Query: 3 VGEPGVPG 10
+G PG PG
Sbjct: 206 IGVPGYPG 213


>sp|DNLI_METS3|DNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 GEPGVPG 10
GEP +PG
Sbjct: 406 GEPYIPG 412


>sp|DNAJ_METAC|CHAPERONE protein DnaJ|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GTVGEPGVP 9
G GEPG P
Sbjct: 236 GDSGEPGAP 244


>sp|ARCD_HALSA|ARGININE/ORNITHINE antiporter ArcD|Halobacterium salinarum (strain ATCC 700922

Query: 1 GTVGEPGVP 9
GTV EP +P
Sbjct: 417 GTVSEPMIP 425


>sp|ARCD_HALS3|ARGININE/ORNITHINE antiporter ArcD|Halobacterium salinarum (strain ATCC 29341

Query: 1 GTVGEPGVP 9
GTV EP +P
Sbjct: 417 GTVSEPMIP 425


>sp|CAS6_HALMT|CRISPR-ASSOCIATED endoribonuclease Cas6|Haloferax mediterranei (strain ATCC 33500

Query: 3 VGEPGVPG 10
VGEPG G
Sbjct: 109 VGEPGTRG 116


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 3 VGEPGVPG 10
+GEPG+ G
Sbjct: 400 LGEPGIIG 407


>sp|AROA_METMA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosarcina mazei (strain ATCC

Query: 1 GTVGEPGVP 9
G+ G+PG+P
Sbjct: 72 GSNGKPGIP 80


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 3 VGEPGVP 9
VGEPG P
Sbjct: 362 VGEPGAP 368


>sp|RTCA_THEGJ|RNA 3'-terminal phosphate cyclase|Thermococcus gammatolerans (strain

Query: 1 GTVGEPGV 8
G +GEPGV
Sbjct: 328 GEIGEPGV 335


>sp|ILVH_METTH|PROBABLE acetolactate synthase small subunit|Methanothermobacter

Query: 2 TVGEPGVPG 10
TVGE PG
Sbjct: 40 TVGESETPG 48


>sp|AGL3_SULAC|UDP-SULFOQUINOVOSE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GTVGEPGVPG 10
GT+GE G P
Sbjct: 143 GTMGEYGTPA 152




112|Sequence|556|565|PGVPGPRGLP

>sp|Y1232_METJA|UNCHARACTERIZED protein MJ1232|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GVPGPRG 8
GVPGP+G
Sbjct: 56 GVPGPKG 62


>sp|THII_SACI7|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 VPGPRGLP 10
+ GPRGLP
Sbjct: 159 IKGPRGLP 166


>sp|THII_SACI2|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 VPGPRGLP 10
+ GPRGLP
Sbjct: 159 IKGPRGLP 166


>sp|THII_SACI1|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 VPGPRGLP 10
+ GPRGLP
Sbjct: 159 IKGPRGLP 166


>sp|DNAK_METBU|CHAPERONE protein DnaK|Methanococcoides burtonii (strain DSM 6242

Query: 4 PGPRGLP 10
P PRGLP
Sbjct: 438 PAPRGLP 444


>sp|THII_THEAC|TRNA sulfurtransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 VPGPRGLP 10
+PGP GLP
Sbjct: 157 IPGPGGLP 164


>sp|DNAK_METTP|CHAPERONE protein DnaK|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 PGPRGLP 10
P PRG+P
Sbjct: 439 PAPRGIP 445


>sp|DNAK_METAR|CHAPERONE protein DnaK|Methanocella arvoryzae (strain DSM 22066

Query: 4 PGPRGLP 10
P PRG+P
Sbjct: 435 PAPRGIP 441


>sp|DNAK_THEVO|CHAPERONE protein DnaK|Thermoplasma volcanium (strain ATCC 51530

Query: 4 PGPRGLP 10
P PRG+P
Sbjct: 441 PAPRGIP 447


>sp|RNZ_SULTO|RIBONUCLEASE Z|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GVPGPRGLP 10
G P RGLP
Sbjct: 12 GAPNKRGLP 20


>sp|RNZ_SULAC|RIBONUCLEASE Z|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GVPGPRGLP 10
G P RGLP
Sbjct: 12 GAPNKRGLP 20


>sp|THII_SACS2|PROBABLE tRNA sulfurtransferase|Saccharolobus solfataricus (strain ATCC

Query: 3 VPGPRGLP 10
+ GP+GLP
Sbjct: 157 IKGPKGLP 164


>sp|THII_SACI6|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 VPGPRGLP 10
+ GP+GLP
Sbjct: 159 IKGPKGLP 166


>sp|THII_SACI4|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 VPGPRGLP 10
+ GP+GLP
Sbjct: 159 IKGPKGLP 166


>sp|THII_SACI3|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain M.16.27)

Query: 3 VPGPRGLP 10
+ GP+GLP
Sbjct: 159 IKGPKGLP 166


>sp|DNAK_METMZ|CHAPERONE protein DnaK|Methanosarcina mazei (Methanosarcina frisia)

Query: 4 PGPRGLP 10
P PRG+P
Sbjct: 438 PAPRGIP 444


>sp|DNAK_METMA|CHAPERONE protein DnaK|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PGPRGLP 10
P PRG+P
Sbjct: 438 PAPRGIP 444


>sp|DNAK_THEAC|CHAPERONE protein DnaK|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 PGPRGLP 10
P PRG+P
Sbjct: 440 PAPRGVP 446


>sp|DNAK_METBF|CHAPERONE protein DnaK|Methanosarcina barkeri (strain Fusaro /

Query: 4 PGPRGLP 10
P PRG+P
Sbjct: 438 PAPRGIP 444


>sp|DNAK_METAC|CHAPERONE protein DnaK|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 PGPRGLP 10
P PRG+P
Sbjct: 438 PAPRGIP 444


>sp|THII_METTH|PROBABLE tRNA sulfurtransferase|Methanothermobacter thermautotrophicus

Query: 3 VPGPRGLP 10
+PGP GLP
Sbjct: 166 IPGPGGLP 173


>sp|DNAK_PICTO|CHAPERONE protein DnaK|Picrophilus torridus (strain ATCC 700027

Query: 4 PGPRGLP 10
P PRG+P
Sbjct: 440 PAPRGVP 446


>sp|HISX_PICTO|HISTIDINOL dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 3 VPGPRGLP 10
VPG R LP
Sbjct: 100 VPGKRALP 107


>sp|THII_SULAC|PROBABLE tRNA sulfurtransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 GPRGLP 10
GPRG P
Sbjct: 157 GPRGFP 162


>sp|DNAK_NITMS|CHAPERONE protein DnaK|Nitrosopumilus maritimus (strain SCM1)

Query: 4 PGPRGLP 10
P PRG+P
Sbjct: 442 PAPRGVP 448


>sp|DNAK_METTH|CHAPERONE protein DnaK|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 PGPRGLP 10
P PRG+P
Sbjct: 443 PAPRGVP 449


>sp|DNAK_METTE|CHAPERONE protein DnaK|Methanosarcina thermophila

Query: 4 PGPRGLP 10
P PRG+P
Sbjct: 438 PAPRGVP 444


>sp|RS5_ARCFU|SMALL ribosomal subunit protein uS5|Archaeoglobus fulgidus (strain ATCC

Query: 3 VPGPRGL 9
+PGP+GL
Sbjct: 142 IPGPKGL 148


>sp|SUCC_STAMF|SUCCINATE--COA ligase [ADP-forming] subunit beta|Staphylothermus marinus (strain

Query: 2 GVPGPRG 8
G+P PRG
Sbjct: 16 GIPVPRG 22


>sp|RNZ_METS5|RIBONUCLEASE Z|Metallosphaera sedula (strain ATCC 51363

Query: 2 GVPGPRGLP 10
G P RGLP
Sbjct: 12 GAPSRRGLP 20


>sp|RS5_PYRAB|SMALL ribosomal subunit protein uS5|Pyrococcus abyssi (strain GE5 /

Query: 3 VPGPRGL 9
+PGPRGL
Sbjct: 157 IPGPRGL 163


>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GVPGPRGLP 10
GVPG G+P
Sbjct: 159 GVPGSAGVP 167


>sp|RS5_PYRFU|SMALL ribosomal subunit protein uS5|Pyrococcus furiosus (strain ATCC

Query: 3 VPGPRGL 9
+PGPRGL
Sbjct: 157 IPGPRGL 163


>sp|RS5_PYRHO|SMALL ribosomal subunit protein uS5|Pyrococcus horikoshii (strain ATCC

Query: 3 VPGPRGL 9
+PGPRGL
Sbjct: 157 IPGPRGL 163


>sp|TFE_HALSA|TRANSCRIPTION factor E|Halobacterium salinarum (strain ATCC 700922

Query: 5 GPRGLP 10
GP+G+P
Sbjct: 21 GPKGMP 26


>sp|TFE_HALMA|TRANSCRIPTION factor E|Haloarcula marismortui (strain ATCC 43049

Query: 5 GPRGLP 10
GP+G+P
Sbjct: 21 GPKGMP 26


>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 791 VPGRRGYP 798


>sp|DNAK_CENSY|CHAPERONE protein DnaK|Cenarchaeum symbiosum (strain A)

Query: 4 PGPRGLP 10
P PRG+P
Sbjct: 441 PAPRGIP 447


>sp|Y1640_METAR|UPF0597 protein UNCMA_16400|Methanocella arvoryzae (strain DSM 22066

Query: 3 VPGPRGLP 10
V PRG+P
Sbjct: 157 VSSPRGMP 164


>sp|AATB_PICTO|A-TYPE ATP synthase subunit B|Picrophilus torridus (strain ATCC 700027

Query: 3 VPGPRGLP 10
+PG RG P
Sbjct: 268 IPGRRGYP 275


>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 274 VPGRRGYP 281


>sp|AATB_HALLT|A-TYPE ATP synthase subunit B|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 273 VPGRRGYP 280


>sp|AATB_THEVO|A-TYPE ATP synthase subunit B|Thermoplasma volcanium (strain ATCC 51530

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 268 VPGRRGYP 275


>sp|AATB_THEAC|A-TYPE ATP synthase subunit B|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 268 VPGRRGYP 275


>sp|ARTA_HALVD|ARCHAEOSORTASE A|Haloferax volcanii (strain ATCC 29605

Query: 3 VPGPRGL 9
VP PRG+
Sbjct: 117 VPAPRGV 123


>sp|AATB_HALMA|A-TYPE ATP synthase subunit B|Haloarcula marismortui (strain ATCC 43049

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 272 VPGRRGYP 279


>sp|AATB_METST|A-TYPE ATP synthase subunit B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 273 VPGRRGYP 280


>sp|AATB_META3|A-TYPE ATP synthase subunit B|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 272 VPGRRGYP 279


>sp|RS5_METBF|SMALL ribosomal subunit protein uS5|Methanosarcina barkeri (strain Fusaro

Query: 3 VPGPRGL 9
+P PRGL
Sbjct: 144 IPAPRGL 150


>sp|AATB_PYRHO|A-TYPE ATP synthase subunit B|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 270 VPGRRGYP 277


>sp|AATB_NATPD|A-TYPE ATP synthase subunit B|Natronomonas pharaonis (strain ATCC 35678

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 273 VPGRRGYP 280


>sp|AATB_METS3|A-TYPE ATP synthase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 272 VPGRRGYP 279


>sp|RL10E_METS5|LARGE ribosomal subunit protein uL16|Metallosphaera sedula (strain ATCC

Query: 1 PGVPGPR 7
PGVP P+
Sbjct: 24 PGVPQPK 30


>sp|AATB_PYRAB|A-TYPE ATP synthase subunit B|Pyrococcus abyssi (strain GE5 /

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 267 VPGRRGYP 274


>sp|RS5_THEKO|SMALL ribosomal subunit protein uS5|Thermococcus kodakarensis (strain

Query: 3 VPGPRGL 9
+PGPRGL
Sbjct: 156 MPGPRGL 162


>sp|RL10_THEON|LARGE ribosomal subunit protein uL10|Thermococcus onnurineus (strain NA1)

Query: 1 PGVPGPR 7
PGVP PR
Sbjct: 113 PGVPVPR 119


>sp|AATB_METTH|A-TYPE ATP synthase subunit B|Methanothermobacter thermautotrophicus

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 272 VPGRRGYP 279


>sp|AATB_METAR|A-TYPE ATP synthase subunit B|Methanocella arvoryzae (strain DSM 22066

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 265 VPGRRGYP 272


>sp|AATB_PYRFU|A-TYPE ATP synthase subunit B|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 267 VPGRRGYP 274


>sp|AATB_METMP|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain DSM 14266

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 272 VPGRRGYP 279


>sp|AATB_HALVD|A-TYPE ATP synthase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 270 VPGRRGYP 277


>sp|Y1112_PYRHO|UPF0127 protein PH1112|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VPGPRGL 9
+ GPRGL
Sbjct: 93 IEGPRGL 99


>sp|RS5_METTP|SMALL ribosomal subunit protein uS5|Methanothrix thermoacetophila (strain

Query: 3 VPGPRGL 9
+P PRGL
Sbjct: 147 MPAPRGL 153


>sp|RS3A_AERPE|SMALL ribosomal subunit protein eS1|Aeropyrum pernix (strain ATCC 700893

Query: 3 VPGPRG 8
VPGP G
Sbjct: 194 VPGPNG 199


>sp|AATB_METM7|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C7 /

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 272 VPGRRGYP 279


>sp|AATB_METM6|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C6 /

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 272 VPGRRGYP 279


>sp|AATB_METPE|A-TYPE ATP synthase subunit B|Methanosphaerula palustris (strain ATCC

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 265 VPGRRGYP 272


>sp|AATB_METM5|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C5 /

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 272 VPGRRGYP 279


>sp|AATB_HALSA|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 700922

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 273 VPGRRGYP 280


>sp|AATB_HALS3|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 29341

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 273 VPGRRGYP 280


>sp|THII_METS3|PROBABLE tRNA sulfurtransferase|Methanobrevibacter smithii (strain ATCC

Query: 3 VPGPRGLP 10
+ GP GLP
Sbjct: 164 IDGPGGLP 171


>sp|AATB_THEKO|A-TYPE ATP synthase subunit B|Thermococcus kodakarensis (strain ATCC

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 270 VPGRRGYP 277


>sp|G6PI_HALMA|PROBABLE glucose-6-phosphate isomerase|Haloarcula marismortui (strain ATCC

Query: 1 PGVPGPRGLP 10
P +P P G+P
Sbjct: 179 PTLPVPEGVP 188


>sp|AATB_THEON|A-TYPE ATP synthase subunit B|Thermococcus onnurineus (strain NA1)

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 270 VPGRRGYP 277


>sp|AATB_THESI|A-TYPE ATP synthase subunit B|Thermococcus sp. (strain KI)

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 268 VPGRRGYP 275


>sp|AATB_THEGJ|A-TYPE ATP synthase subunit B|Thermococcus gammatolerans (strain DSM 15229

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 268 VPGRRGYP 275


>sp|AATB_METJA|A-TYPE ATP synthase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 272 VPGRRGYP 279


>sp|AATB_DESSY|A-TYPE ATP synthase subunit B|Desulfurococcus sp. (strain SY)

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 268 VPGRRGYP 275


>sp|AATB_ARCFU|A-TYPE ATP synthase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 265 VPGRRGYP 272


>sp|AATB_METVS|A-TYPE ATP synthase subunit B|Methanococcus vannielii (strain ATCC 35089

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 272 VPGRRGYP 279


>sp|ADH_SACS2|NAD-DEPENDENT alcohol dehydrogenase|Saccharolobus solfataricus (strain ATCC

Query: 2 GVPGPRG 8
GVP P+G
Sbjct: 19 GVPKPKG 25


>sp|AATB_METBU|A-TYPE ATP synthase subunit B|Methanococcoides burtonii (strain DSM 6242

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 266 VPGRRGYP 273


>sp|THII_PYRAE|TRNA sulfurtransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 VPGPRGLP 10
+ GP GLP
Sbjct: 159 IEGPGGLP 166


>sp|GSA_PICTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Picrophilus torridus (strain ATCC 700027

Query: 2 GVPGPRGLP 10
GVP G+P
Sbjct: 157 GVPSSNGVP 165


>sp|AATB_METTP|A-TYPE ATP synthase subunit B|Methanothrix thermoacetophila (strain DSM

Query: 3 VPGPRGLP 10
VPG RG P
Sbjct: 266 VPGRRGYP 273


>sp|AATB2_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 VPGPRGLP 10
+PG RG P
Sbjct: 273 IPGRRGYP 280


>sp|RL10E_THESM|LARGE ribosomal subunit protein uL16|Thermococcus sibiricus (strain DSM

Query: 2 GVPGPR 7
G PGPR
Sbjct: 25 GAPGPR 30


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GVPGPRG 8
G PGP G
Sbjct: 185 GYPGPEG 191


>sp|MTD_METTM|F420-DEPENDENT methylenetetrahydromethanopterin

Query: 1 PGVPGP 6
PG PGP
Sbjct: 70 PGAPGP 75


>sp|DNAG_CALMQ|DNA primase DnaG|Caldivirga maquilingensis (strain ATCC 700844

Query: 5 GPRGLP 10
GP GLP
Sbjct: 158 GPEGLP 163




113|Sequence|561|570|PRGLPGLPGV

>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PGLPGV 10
PGLPGV
Sbjct: 283 PGLPGV 288


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 2 RGLPGLPGV 10
RGLP PG+
Sbjct: 385 RGLPASPGI 393


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 GLPGLPGV 10
GLP LPGV
Sbjct: 90 GLPELPGV 97


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PRGLPGLP 8
P+G PG+P
Sbjct: 431 PKGAPGMP 438


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 RGLPGLPGV 10
RG+P PGV
Sbjct: 377 RGVPASPGV 385


>sp|PRIS_SACS2|DNA primase small subunit PriS|Saccharolobus solfataricus (strain ATCC

Query: 3 GLPGLPG 9
G+PG PG
Sbjct: 207 GVPGYPG 213


>sp|Y939_SULTO|KELCH domain-containing protein STK_09390|Sulfurisphaera tokodaii (strain

Query: 4 LPGLPGV 10
LP LPGV
Sbjct: 223 LPSLPGV 229


>sp|FTHS_METLZ|FORMATE--TETRAHYDROFOLATE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 LPGLPGV 10
LPGLP V
Sbjct: 536 LPGLPAV 542


>sp|ILVD_SACS2|DIHYDROXY-ACID dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PRGLPGLP 8
P+G PG+P
Sbjct: 439 PKGAPGMP 446


>sp|ILVD_SACI7|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 PRGLPGLP 8
P+G PG+P
Sbjct: 439 PKGAPGMP 446


>sp|ILVD_SACI1|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 PRGLPGLP 8
P+G PG+P
Sbjct: 439 PKGAPGMP 446


>sp|HMDX_METJA|H(2)-FORMING methylenetetrahydromethanopterin dehydrogenase-related protein

Query: 1 PRGLPGLP 8
P G+PG P
Sbjct: 145 PTGVPGTP 152


>sp|SYE_HALWD|GLUTAMATE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 LPGLPGV 10
LP LPGV
Sbjct: 98 LPSLPGV 104


>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii (strain

Query: 4 LPGLPG 9
+PG+PG
Sbjct: 278 MPGMPG 283


>sp|RNZ_SULAC|RIBONUCLEASE Z|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RGLPGL 7
RGLPG+
Sbjct: 17 RGLPGI 22


>sp|ELP3_METIM|TRNA uridine(34) acetyltransferase|Methanocaldococcus infernus (strain

Query: 4 LPGLPG 9
+PG+PG
Sbjct: 272 MPGMPG 277


>sp|TRUD_PYRAR|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum arsenaticum (strain DSM

Query: 2 RGLPGLPGV 10
+GLP +PGV
Sbjct: 113 KGLPEIPGV 121


>sp|UPPP_SULTO|UNDECAPRENYL-DIPHOSPHATASE tokodaii (strain DSM 16993

Query: 2 RGLPGLPGV 10
+GL LPGV
Sbjct: 149 QGLAALPGV 157


>sp|UPPP_SACS2|UNDECAPRENYL-DIPHOSPHATASE solfataricus (strain ATCC 35092

Query: 2 RGLPGLPGV 10
+GL LPGV
Sbjct: 159 QGLAALPGV 167


>sp|ILVD_SACI2|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PRGLPGLP 8
P+G PG+P
Sbjct: 439 PKGAPGMP 446


>sp|ILVD_SACI6|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PRGLPGLP 8
P+G PG+P
Sbjct: 439 PKGAPGMP 446


>sp|ILVD_SACI4|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PRGLPGLP 8
P+G PG+P
Sbjct: 439 PKGAPGMP 446


>sp|ILVD_SACI3|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 PRGLPGLP 8
P+G PG+P
Sbjct: 439 PKGAPGMP 446


>sp|UPPP_SACI4|UNDECAPRENYL-DIPHOSPHATASE islandicus (strain M.14.25 /

Query: 2 RGLPGLPGV 10
+GL LPGV
Sbjct: 159 QGLAALPGV 167


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PRGLPGLP 8
P+G PG+P
Sbjct: 440 PKGAPGMP 447


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 4 LPGLPG 9
+PGLPG
Sbjct: 6 VPGLPG 11


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 4 LPGLPG 9
+PGLPG
Sbjct: 6 VPGLPG 11


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PRGLPGLP 8
P+G PG+P
Sbjct: 440 PKGAPGMP 447


>sp|DNAG_CALMQ|DNA primase DnaG|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 PRGLPGLPGV 10
P GLP P V
Sbjct: 159 PEGLPAGPDV 168


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PRGLPGLP 8
P+G PG+P
Sbjct: 440 PKGAPGMP 447


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PRGLPGLP 8
P+G PG+P
Sbjct: 440 PKGAPGMP 447


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PRGLPGLP 8
P+G PG+P
Sbjct: 440 PKGAPGMP 447


>sp|GATD_PYRAB|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrococcus abyssi (strain GE5 /

Query: 3 GLPGLPGV 10
G PGLP V
Sbjct: 87 GKPGLPEV 94


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PRGLPGLP 8
P+G PG+P
Sbjct: 436 PKGAPGMP 443


>sp|ILVD_METB6|DIHYDROXY-ACID dehydratase|Methanoregula boonei (strain DSM 21154

Query: 1 PRGLPGLP 8
PRG PG+P
Sbjct: 434 PRGGPGMP 441


>sp|UPPP_SACI6|UNDECAPRENYL-DIPHOSPHATASE islandicus (strain M.16.4 /

Query: 2 RGLPGLPGV 10
+GL LPGV
Sbjct: 159 QGLAALPGV 167


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 GLPGLPGV 10
GLP PG+
Sbjct: 158 GLPDSPGI 165


>sp|ILVD_METMJ|DIHYDROXY-ACID dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PRGLPGLP 8
PRG PG+P
Sbjct: 431 PRGGPGMP 438


>sp|COXX_PYRNV|PROTOHEME IX farnesyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 RGLPGLPGV 10
RGLPGL V
Sbjct: 226 RGLPGLALV 234


>sp|SYE_PYRAE|GLUTAMATE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GLPGLPGV 10
GLP LP V
Sbjct: 90 GLPELPNV 97




114|Sequence|566|575|GLPGVPGMPG

>sp|PRIS_SACS2|DNA primase small subunit PriS|Saccharolobus solfataricus (strain ATCC

Query: 4 GVPGMPG 10
GVPG PG
Sbjct: 207 GVPGYPG 213


Query: 1 GLPGVPG 7
G+PG PG
Sbjct: 207 GVPGYPG 213


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GLPGVPGMP 9
GLP PG+P
Sbjct: 158 GLPDSPGIP 166


>sp|Y1209_PYRHO|UNCHARACTERIZED protein PH1209|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LPGVPGMPG 10
LP +PG PG
Sbjct: 14 LPPLPGSPG 22


Query: 2 LPGVPGMPG 10
LPG PG G
Sbjct: 17 LPGSPGYKG 25


>sp|PYCA_ARCFU|PYRUVATE carboxylase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GLPGVPGMP 9
G+P +PG P
Sbjct: 127 GVPVIPGSP 135


>sp|ELP3_METIM|TRNA uridine(34) acetyltransferase|Methanocaldococcus infernus (strain

Query: 5 VPGMPG 10
+PGMPG
Sbjct: 272 MPGMPG 277


>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii (strain

Query: 5 VPGMPG 10
+PGMPG
Sbjct: 278 MPGMPG 283


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GLPGVPGMPG 10
G+ G+P +PG
Sbjct: 87 GIEGLPELPG 96


Query: 3 PGVPGMP 9
PG+ G+P
Sbjct: 86 PGIEGLP 92


Query: 1 GLPGVPGM 8
GLP +PG+
Sbjct: 90 GLPELPGV 97


>sp|DNAJ_HALSA|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 700922

Query: 1 GLPGVPGMP 9
G PG PG P
Sbjct: 257 GAPGEPGAP 265


Query: 4 GVPGMPG 10
G PG PG
Sbjct: 257 GAPGEPG 263


>sp|DNAJ_HALS3|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 29341

Query: 1 GLPGVPGMP 9
G PG PG P
Sbjct: 257 GAPGEPGAP 265


Query: 4 GVPGMPG 10
G PG PG
Sbjct: 257 GAPGEPG 263


>sp|Y1487_ARCFU|UNCHARACTERIZED protein AF_1487|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 VPGMPG 10
VPG+PG
Sbjct: 192 VPGIPG 197


Query: 2 LPGVPG 7
+PG+PG
Sbjct: 192 VPGIPG 197


>sp|RPO2N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanocaldococcus jannaschii (strain

Query: 6 PGMPG 10
PGMPG
Sbjct: 214 PGMPG 218


>sp|GSA_METM5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C5 /

Query: 1 GLPGVPGMP 9
G P PG+P
Sbjct: 164 GAPNSPGIP 172


>sp|GSA_METM6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C6 /

Query: 1 GLPGVPGMP 9
G P PG+P
Sbjct: 164 GAPNSPGIP 172


>sp|GSA_METM7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C7 /

Query: 1 GLPGVPGMP 9
G P PG+P
Sbjct: 164 GAPNSPGIP 172


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GLPGVPGMP 9
G P PG+P
Sbjct: 167 GAPNSPGIP 175


>sp|GSA_METMP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GLPGVPGMP 9
G P PG+P
Sbjct: 164 GAPNSPGIP 172


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 5 VPGMPG 10
VPG+PG
Sbjct: 6 VPGLPG 11


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 5 VPGMPG 10
VPG+PG
Sbjct: 6 VPGLPG 11


>sp|GSA_METVS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GLPGVPGMP 9
G P PG+P
Sbjct: 164 GAPNSPGIP 172


>sp|Y1062_PYRAB|UNCHARACTERIZED protein PYRAB10620|Pyrococcus abyssi (strain GE5 /

Query: 2 LPGVPGMPG 10
LPG PG G
Sbjct: 17 LPGSPGYRG 25


>sp|PYCA_METJA|PYRUVATE carboxylase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GLPGVPGMPG 10
G+P +PG G
Sbjct: 127 GVPLIPGSEG 136


>sp|RS6E_PYRAR|SMALL ribosomal subunit protein eS6|Pyrobaculum arsenaticum (strain DSM

Query: 1 GLPGVPGMPG 10
G P VPG+PG
Sbjct: 65 GAPMVPGVPG 74


>sp|AGLI_HALVD|GLYCOSYLTRANSFERASE AglI|Haloferax volcanii (strain ATCC 29605

Query: 1 GLPGVPGMP 9
G PG+P P
Sbjct: 239 GRPGIPPRP 247


>sp|GSA_THEVO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GLPGVPGMP 9
G P PG+P
Sbjct: 157 GSPSSPGIP 165


>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GLPGVPGMP 9
G+PG G+P
Sbjct: 159 GVPGSAGVP 167


>sp|SYS2_METTH|TYPE-2 serine--tRNA ligase|Methanothermobacter thermautotrophicus (strain

Query: 3 PGVPGMP 9
PGV G+P
Sbjct: 109 PGVSGIP 115




115|Sequence|571|580|PGMPGPKGPP

>sp|Y1232_METJA|UNCHARACTERIZED protein MJ1232|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GMPGPKG 8
G+PGPKG
Sbjct: 56 GVPGPKG 62


>sp|IPK_THEAC|ISOPENTENYL phosphate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GMPGPKGP 9
G+PGPK P
Sbjct: 57 GLPGPKNP 64


>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 4 PGPKGPP 10
P P+GPP
Sbjct: 17 PQPEGPP 23


>sp|ADH_SACS2|NAD-DEPENDENT alcohol dehydrogenase|Saccharolobus solfataricus (strain ATCC

Query: 2 GMPGPKGP 9
G+P PKGP
Sbjct: 19 GVPKPKGP 26


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PGPKGPP 10
P P GPP
Sbjct: 100 PNPNGPP 106


>sp|RS3A_IGNH4|SMALL ribosomal subunit protein eS1|Ignicoccus hospitalis (strain KIN4/I

Query: 3 MPGPKGP 9
MP P+GP
Sbjct: 195 MPSPEGP 201


>sp|RS3A_AERPE|SMALL ribosomal subunit protein eS1|Aeropyrum pernix (strain ATCC 700893

Query: 3 MPGPKGP 9
+PGP GP
Sbjct: 194 VPGPNGP 200


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGMPGPKGPP 10
PG P P PP
Sbjct: 113 PGHPLPWEPP 122


>sp|HIS1_METJA|ATP phosphoribosyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 PGMPGP 6
PGM GP
Sbjct: 236 PGMAGP 241


>sp|HIS1_META3|ATP phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 PGMPGP 6
PGM GP
Sbjct: 236 PGMSGP 241


>sp|RS5_THEKO|SMALL ribosomal subunit protein uS5|Thermococcus kodakarensis (strain

Query: 3 MPGPKG 8
MPGP+G
Sbjct: 156 MPGPRG 161


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 PGPKGPP 10
P P GPP
Sbjct: 110 PNPNGPP 116


>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GMPGPKG 8
GMP PKG
Sbjct: 60 GMPYPKG 66


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 PGPKGPP 10
P P GPP
Sbjct: 107 PNPNGPP 113


>sp|RPO2N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanocaldococcus jannaschii (strain

Query: 1 PGMPG 5
PGMPG
Sbjct: 214 PGMPG 218


>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 PGMPG 5
PGMPG
Sbjct: 279 PGMPG 283


>sp|ELP3_METIM|TRNA uridine(34) acetyltransferase|Methanocaldococcus infernus (strain

Query: 1 PGMPG 5
PGMPG
Sbjct: 273 PGMPG 277


>sp|HIS1_METMA|ATP phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PGMPGP 6
PGM GP
Sbjct: 232 PGMSGP 237


>sp|MTD_METHJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanospirillum

Query: 3 MPGPKG 8
+PGPKG
Sbjct: 72 LPGPKG 77


>sp|KAE1B_METAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 GMPGPKGP 9
G+P P GP
Sbjct: 173 GLPHPGGP 180


>sp|DTDA_HYPBU|D-AMINOACYL-TRNA deacylase|Hyperthermus butylicus (strain DSM 5456

Query: 2 GMPGPKGP 9
G PGP+ P
Sbjct: 89 GNPGPEAP 96


>sp|HIS1_METAC|ATP phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 PGMPGP 6
PGM GP
Sbjct: 232 PGMSGP 237


>sp|HIS1_METTH|ATP phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 1 PGMPGP 6
PGM GP
Sbjct: 234 PGMTGP 239


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GMPGPKG 8
G+P PKG
Sbjct: 397 GLPVPKG 403


>sp|ACD_METJA|ACETATE--COA ligase [ADP-forming]|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GMPGPKG 8
G+P PKG
Sbjct: 502 GLPVPKG 508


>sp|KAE1B_METMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 GMPGPKGP 9
G+P P GP
Sbjct: 173 GLPHPGGP 180


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PGMPGPKGPP 10
P PG GPP
Sbjct: 448 PMKPGTNGPP 457


>sp|KAE1B_METHJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 GMPGPKGP 9
G+P P GP
Sbjct: 165 GLPHPGGP 172


>sp|HIS1_METBF|ATP phosphoribosyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PGMPGP 6
PGM GP
Sbjct: 232 PGMSGP 237


>sp|TRM1_THEKO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus kodakarensis

Query: 1 PGMPGPKGP 9
P PG GP
Sbjct: 266 PDKPGASGP 274


>sp|KAE1_METTP|TRNA N6-adenosine threonylcarbamoyltransferase|Methanothrix

Query: 2 GMPGPKGP 9
G+P P GP
Sbjct: 167 GLPHPGGP 174


>sp|G6PI_HALMA|PROBABLE glucose-6-phosphate isomerase|Haloarcula marismortui (strain ATCC

Query: 1 PGMPGPKGPP 10
P +P P+G P
Sbjct: 179 PTLPVPEGVP 188


>sp|RL10E_SULAC|LARGE ribosomal subunit protein uL16|Sulfolobus acidocaldarius (strain

Query: 1 PGMPGPK 7
PG+P PK
Sbjct: 24 PGIPMPK 30


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GMPGPKG 8
G PGP+G
Sbjct: 185 GYPGPEG 191




116|Sequence|576|585|PKGPPGPPGP

>sp|TRMY_METM5|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 GPPGPP 8
GPP PP
Sbjct: 58 GPPNPP 63


>sp|TRUA_PYRFU|TRNA pseudouridine synthase A|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KGPPGPP 8
K PP PP
Sbjct: 207 KVPPAPP 213


>sp|TRUA_PYRAB|TRNA pseudouridine synthase A|Pyrococcus abyssi (strain GE5 /

Query: 2 KGPPGPP 8
K PP PP
Sbjct: 207 KVPPAPP 213


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GPPGPPGP 10
GPP P P
Sbjct: 43 GPPYPSSP 50


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GPPGPPGP 10
GPP P P
Sbjct: 43 GPPYPSSP 50


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 GPPGPPGP 10
GPP P P
Sbjct: 46 GPPYPSSP 53


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 GPPGPPGP 10
GPP P P
Sbjct: 46 GPPYPSSP 53


>sp|Y520_METJA|PUTATIVE NADH-ubiquinone oxidoreductase MJ0520|Methanocaldococcus

Query: 2 KGPPGPP 8
+G PGPP
Sbjct: 37 QGRPGPP 43


>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 1 PKGPPGPPGP 10
P+GP G P P
Sbjct: 227 PEGPNGNPDP 236


>sp|RS3A_AERPE|SMALL ribosomal subunit protein eS1|Aeropyrum pernix (strain ATCC 700893

Query: 5 PGPPGP 10
PGP GP
Sbjct: 195 PGPNGP 200


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 1 PKGPPGPPGP 10
P+GP G P P
Sbjct: 211 PEGPGGNPDP 220


>sp|Y444_METMA|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina mazei

Query: 1 PKGPPG 6
PKG PG
Sbjct: 209 PKGKPG 214


>sp|TRMY_PYRHO|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus horikoshii

Query: 3 GPPGPP 8
GPP PP
Sbjct: 58 GPPSPP 63


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 2 KGPPGPPG 9
KGP GP G
Sbjct: 216 KGPMGPTG 223


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PKGPPGPP 8
PKG PG P
Sbjct: 431 PKGAPGMP 438


>sp|RRP42_METAC|EXOSOME complex component Rrp42|Methanosarcina acetivorans (strain ATCC

Query: 1 PKGPPGPP 8
P+ PGPP
Sbjct: 93 PEFEPGPP 100


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 PPGPPGP 10
PPG P P
Sbjct: 410 PPGKPSP 416


>sp|TRM1_METBU|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcoides burtonii

Query: 1 PKGPPGPP 8
P+G P PP
Sbjct: 19 PEGVPFPP 26


>sp|SRP54_METLZ|SIGNAL recognition particle 54 kDa|Methanocorpusculum labreanum (strain

Query: 2 KGPPGPPGP 10
KG GP GP
Sbjct: 437 KGGMGPMGP 445


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 1 PKGPPGP 7
P GPP P
Sbjct: 321 PSGPPRP 327


Query: 3 GPPGPPGP 10
P GPP P
Sbjct: 320 APSGPPRP 327


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 PKGPPGPPGP 10
P+GP G P P
Sbjct: 220 PEGPNGNPDP 229


>sp|KATG2_HALMA|CATALASE-PEROXIDASE 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 PKGPPGPPGP 10
P+GP G P P
Sbjct: 221 PEGPDGNPDP 230


>sp|TRMY_PYRAB|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus abyssi

Query: 3 GPPGPP 8
GPP PP
Sbjct: 58 GPPDPP 63


>sp|RRP42_METMA|EXOSOME complex component Rrp42|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PKGPPGPP 8
P+ PGPP
Sbjct: 93 PEFEPGPP 100


>sp|HIS7_METMJ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PKGPPGPPG 9
P GP G PG
Sbjct: 123 PVGPGGIPG 131


>sp|RRP42_METKA|EXOSOME complex component Rrp42|Methanopyrus kandleri (strain AV19 /

Query: 1 PKGPPGPP 8
P PGPP
Sbjct: 91 PSFEPGPP 98


>sp|TRUA_THEGJ|TRNA pseudouridine synthase A|Thermococcus gammatolerans (strain DSM

Query: 2 KGPPGPP 8
K PP PP
Sbjct: 211 KVPPAPP 217


>sp|AATI_AERPE|A-TYPE ATP synthase subunit I|Aeropyrum pernix (strain ATCC 700893

Query: 1 PKGPPGPP 8
P+G PG P
Sbjct: 214 PEGVPGSP 221


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 2 KGPPGPP 8
K PP PP
Sbjct: 368 KAPPRPP 374




117|Sequence|581|590|GPPGPSGAVV

>sp|RS3A_AERPE|SMALL ribosomal subunit protein eS1|Aeropyrum pernix (strain ATCC 700893

Query: 1 GPPGPSGAVV 10
GP GP AVV
Sbjct: 196 GPNGPEKAVV 205


>sp|Y1232_METJA|UNCHARACTERIZED protein MJ1232|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPPGPSGAVV 10
G PGP G V
Sbjct: 56 GVPGPKGGYV 65


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PGPSGAV 9
PGPSG +
Sbjct: 790 PGPSGLI 796


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GPPGPSGAV 9
GPP SGA+
Sbjct: 47 GPPYVSGAI 55


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GPPGPSGAV 9
GPP SGA+
Sbjct: 47 GPPYVSGAI 55


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GPPGPSGAV 9
GPP SGA+
Sbjct: 47 GPPYVSGAI 55


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 GPPGPSGAV 9
GPP SGA+
Sbjct: 47 GPPYVSGAI 55


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GPPGPSGAV 9
GPP SGA+
Sbjct: 44 GPPYCSGAI 52


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPPGPSGAV 9
GPP SGA+
Sbjct: 44 GPPYCSGAI 52


>sp|SECF_METJA|PROTEIN-EXPORT membrane protein SecF|Methanocaldococcus jannaschii (strain ATCC

Query: 3 PGPSGAVV 10
P PSGA++
Sbjct: 143 PVPSGAII 150


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GPPGPSGAV 9
GPP PS +
Sbjct: 43 GPPYPSSPI 51


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GPPGPSGAV 9
GPP PS +
Sbjct: 43 GPPYPSSPI 51


>sp|MTD_METB6|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanoregula

Query: 3 PGPSGA 8
PGP+GA
Sbjct: 73 PGPTGA 78


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 GPPGPSGAV 9
GPP SG++
Sbjct: 46 GPPYASGSI 54


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GPPGPSGA 8
GPP SGA
Sbjct: 48 GPPYTSGA 55


>sp|GPN_PYRAB|GPN-LOOP GTPase PAB0955|Pyrococcus abyssi (strain GE5 /

Query: 4 GPSGAVV 10
GP+GA+V
Sbjct: 65 GPNGAIV 71


>sp|RIBL_METMJ|FAD synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GPPGPSGA 8
GPP P+G+
Sbjct: 138 GPPDPTGS 145


>sp|HAH4_HALMT|HALOCIN-H4 mediterranei (strain ATCC 33500

Query: 1 GPPGPSG 7
PPGP+G
Sbjct: 49 APPGPNG 55


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 1 GPPGPSG 7
GP GP+G
Sbjct: 217 GPMGPTG 223


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GPPGPSGA 8
GPP SGA
Sbjct: 48 GPPYTSGA 55


>sp|KDGK_SULTO|2-DEHYDRO-3-DEOXYGLUCONOKINASE tokodaii (strain DSM 16993

Query: 4 GPSGAVV 10
GP GA+V
Sbjct: 226 GPKGAIV 232




118|Sequence|586|595|SGAVVPLALQ

>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GAVVPLALQ 10
GAVVPL Q
Sbjct: 194 GAVVPLMEQ 202


>sp|NTPTH_PYRCJ|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 SGAVVPLA 8
SGA VPLA
Sbjct: 63 SGARVPLA 70


>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 1 SGAVVPL 7
SGAV+PL
Sbjct: 618 SGAVLPL 624


>sp|ATGT_HALSA|TRNA-GUANINE(15) transglycosylase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GAVVPLALQ 10
GAVVPL Q
Sbjct: 195 GAVVPLMNQ 203




119|Sequence|591|600|PLALQNEPTP

>sp|COABC_THEKO|COENZYME A biosynthesis bifunctional protein|Thermococcus kodakarensis

Query: 1 PLALQNEPTP 10
PL L+ EPTP
Sbjct: 303 PLVLELEPTP 312


>sp|RPO5_METM6|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanococcus maripaludis (strain C6

Query: 1 PLALQNEPTP 10
PL L+ E TP
Sbjct: 42 PLVLETEATP 51


>sp|RS4_METVS|SMALL ribosomal subunit protein uS4|Methanococcus vannielii (strain ATCC

Query: 1 PLALQNEP 8
P+AL+N P
Sbjct: 160 PMALENHP 167




120|Sequence|596|605|NEPTPAPEDN

>sp|COXX_HALMA|PROTOHEME IX farnesyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PTPAPE 8
PTPAPE
Sbjct: 154 PTPAPE 159


>sp|GFCR2_METAC|TRANSCRIPTIONAL regulator GfcR 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EPTPAPED 9
E TPAP+D
Sbjct: 46 EATPAPKD 53


>sp|MEND_HALMA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 EPTPAPEDN 10
EPTP PED+
Sbjct: 179 EPTPMPEDD 187


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PTPAPEDN 10
PTP P D+
Sbjct: 246 PTPNPRDD 253


>sp|GFCR2_METBF|TRANSCRIPTIONAL regulator GfcR 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 EPTPAPED 9
E TPAP+D
Sbjct: 46 EITPAPKD 53


>sp|Y738_METVS|UPF0210 protein Mevan_0738|Methanococcus vannielii (strain ATCC 35089

Query: 3 PTPAPEDN 10
PTPAP D+
Sbjct: 284 PTPAPGDS 291


>sp|Y1412_META3|UPF0210 protein Maeo_1412|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PTPAPEDN 10
PTPAP D+
Sbjct: 284 PTPAPGDS 291


>sp|FWDC_METWO|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 2 EPTPAPED 9
EP APED
Sbjct: 57 EPADAPED 64


>sp|LEUC_HALVD|3-ISOPROPYLMALATE dehydratase large subunit|Haloferax volcanii (strain ATCC 29605

Query: 1 NEPTPAPED 9
+P PAPED
Sbjct: 303 TQPIPAPED 311


>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 NEPTPAPE 8
NEP P P+
Sbjct: 121 NEPFPQPQ 128


>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 3 PTPAPED 9
PTP P D
Sbjct: 456 PTPLPSD 462


>sp|IF2G_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 1 NEPTPAPE 8
NEP P P+
Sbjct: 118 NEPCPQPQ 125


>sp|IF2G_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 1 NEPTPAPE 8
NEP P P+
Sbjct: 121 NEPFPQPQ 128


>sp|IF2G_METTH|TRANSLATION initiation factor 2 subunit|Methanothermobacter thermautotrophicus

Query: 1 NEPTPAPE 8
NEP P P+
Sbjct: 116 NEPCPQPQ 123


>sp|IF2G_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 NEPTPAPE 8
NEP P P+
Sbjct: 121 NEPCPQPQ 128


>sp|MEND_HALWD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 EPTPAPED 9
EPTP P D
Sbjct: 179 EPTPVPGD 186


>sp|IF2G_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NEPTPAPE 8
NEP P P+
Sbjct: 118 NEPCPRPQ 125


>sp|SRP19_AERPE|SIGNAL recognition particle 19 kDa|Aeropyrum pernix (strain ATCC 700893

Query: 3 PTPAPED 9
P+P PED
Sbjct: 44 PSPKPED 50


>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 PTPAPED 9
P P PED
Sbjct: 104 PLPPPED 110


>sp|AATB_PYRAR|A-TYPE ATP synthase subunit B|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 PTPAPED 9
P P PED
Sbjct: 104 PLPPPED 110


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 3 PTPAPED 9
P P PED
Sbjct: 104 PLPPPED 110


>sp|Y663_METJA|UNCHARACTERIZED protein MJ0663|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NEPTPAP 7
NEP P P
Sbjct: 486 NEPLPKP 492


>sp|IF2G_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 NEPTPAPE 8
NEP P P+
Sbjct: 118 NEPCPRPQ 125


>sp|AATB_PYRCJ|A-TYPE ATP synthase subunit B|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 PTPAPED 9
P P PED
Sbjct: 104 PLPPPED 110


>sp|AATB_PYRAE|A-TYPE ATP synthase subunit B|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PTPAPED 9
P P PED
Sbjct: 104 PLPPPED 110


>sp|RS24_THEON|SMALL ribosomal subunit protein eS24|Thermococcus onnurineus (strain

Query: 2 EPTPAPED 9
EPTP+ +D
Sbjct: 28 EPTPSRKD 35


>sp|IF2G_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 NEPTPAPE 8
NEP P P+
Sbjct: 118 NEPCPRPQ 125


>sp|RS24_PYRHO|SMALL ribosomal subunit protein eS24|Pyrococcus horikoshii (strain ATCC

Query: 2 EPTPAPED 9
EPTP+ +D
Sbjct: 28 EPTPSRKD 35


>sp|RS24_PYRAB|SMALL ribosomal subunit protein eS24|Pyrococcus abyssi (strain GE5 /

Query: 2 EPTPAPED 9
EPTP+ +D
Sbjct: 28 EPTPSRKD 35


>sp|RS24_PYRFU|SMALL ribosomal subunit protein eS24|Pyrococcus furiosus (strain ATCC

Query: 2 EPTPAPED 9
EPTP+ +D
Sbjct: 28 EPTPSRKD 35




121|Sequence|601|610|APEDNGCPPH

>sp|SYT_METM5|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 EDNGCPPH 10
+DNG PPH
Sbjct: 193 KDNGEPPH 200


>sp|Y584_METS5|UPF0282 protein Msed_0584|Metallosphaera sedula (strain ATCC 51363

Query: 1 APEDNGCPPH 10
AP G PPH
Sbjct: 36 APRRYGLPPH 45


>sp|Y1546_PYRCJ|UPF0282 protein Pcal_1546|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 APEDNGCPPH 10
AP G PPH
Sbjct: 36 APRRFGLPPH 45


>sp|Y2322_SULTO|UPF0282 protein STK_23220|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 APEDNGCPPH 10
AP G PPH
Sbjct: 36 APRRYGLPPH 45


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 EDNGCPPH 10
++NG PPH
Sbjct: 193 KENGEPPH 200


>sp|TRPD_PYRAR|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 APEDNGCP 8
APED G P
Sbjct: 248 APEDLGAP 255


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 4 DNGCPPH 10
DNG PP
Sbjct: 525 DNGIPPQ 531


>sp|TRUB_METTH|PROBABLE tRNA pseudouridine synthase B|Methanothermobacter

Query: 4 DNGCPP 9
D GCPP
Sbjct: 20 DYGCPP 25


>sp|Y2298_ARCFU|UNCHARACTERIZED DNA primase small subunit-like|Archaeoglobus fulgidus (strain ATCC

Query: 2 PEDNGCPPH 10
PE+ CP H
Sbjct: 130 PENVSCPYH 138


>sp|HYD1B_PYRFU|SULFHYDROGENASE 1 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EDNGCPP 9
E+N CPP
Sbjct: 339 EENKCPP 345


>sp|TF2B_PYROC|TRANSCRIPTION initiation factor IIB|Pyrodictium occultum

Query: 3 EDNGCPP 9
++ GCPP
Sbjct: 13 KEEGCPP 19


>sp|SYT_METM6|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 EDNGCPPH 10
++NG PPH
Sbjct: 193 KENGEPPH 200


>sp|Y1056_PYRAR|UPF0282 protein Pars_1056|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 APEDNGCPPH 10
AP G PPH
Sbjct: 36 APRRFGLPPH 45


>sp|AROA_METLZ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 4 DNGCPP 9
DNGC P
Sbjct: 139 DNGCAP 144


>sp|Y3680_PYRAE|UPF0282 protein PAE3680|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 APEDNGCPPH 10
AP G PPH
Sbjct: 36 APRRFGLPPH 45


>sp|RS3A_METKA|SMALL ribosomal subunit protein eS1|Methanopyrus kandleri (strain AV19 /

Query: 3 EDNGCPPH 10
E NG PP+
Sbjct: 190 EPNGLPPY 197


>sp|Y277_SULAC|UPF0282 protein Saci_0277|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 APEDNGCPPH 10
AP G PPH
Sbjct: 36 APRRFGLPPH 45


>sp|TF2B4_HALSA|TRANSCRIPTION initiation factor IIB 4|Halobacterium salinarum (strain ATCC

Query: 3 EDNGCP 8
ED+GCP
Sbjct: 28 EDHGCP 33


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 APEDNGCPPH 10
AP+ PPH
Sbjct: 309 APQPRNTPPH 318


>sp|VHCG_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit G|Archaeoglobus profundus (strain

Query: 6 GCPPH 10
GCPPH
Sbjct: 165 GCPPH 169


>sp|MUTL_METTP|DNA mismatch repair protein MutL|Methanothrix thermoacetophila (strain

Query: 3 EDNGCP 8
+D+GCP
Sbjct: 136 KDDGCP 141


>sp|Y934_PYRNV|UPF0282 protein Tneu_0934|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 APEDNGCPPH 10
AP G PPH
Sbjct: 36 APRRFGLPPH 45


>sp|CBID_METST|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PEDNG 6
PEDNG
Sbjct: 150 PEDNG 154


>sp|SYP_PYRHO|PROLINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 APEDNGCP 8
APE + CP
Sbjct: 457 APEGSKCP 464


>sp|SUDHA_PYRFU|SULFIDE dehydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC

Query: 1 APEDNGCPPH 10
AP GCP H
Sbjct: 50 APCIKGCPVH 59


>sp|Y021_PYRIL|UPF0282 protein Pisl_0021|Pyrobaculum islandicum (strain DSM 4184

Query: 1 APEDNGCPPH 10
AP G PPH
Sbjct: 36 APRRFGLPPH 45


>sp|SYP_PYRAB|PROLINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 APEDNGCP 8
APE + CP
Sbjct: 457 APEGSRCP 464


>sp|SYE_KORCO|GLUTAMATE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 APEDNGCP 8
APE NG P
Sbjct: 98 APEPNGYP 105


>sp|RS17_NITMS|SMALL ribosomal subunit protein uS17|Nitrosopumilus maritimus (strain

Query: 3 EDNGCPPH 10
ED CP H
Sbjct: 17 EDKNCPFH 24


>sp|RS17_SACS2|SMALL ribosomal subunit protein uS17|Saccharolobus solfataricus (strain

Query: 3 EDNGCPPH 10
ED CP H
Sbjct: 24 EDEDCPYH 31




122|Sequence|606|615|GCPPHWKNFT

>sp|RS19_SACS2|SMALL ribosomal subunit protein uS19|Saccharolobus solfataricus (strain

Query: 3 PPHWKNF 9
PP WKNF
Sbjct: 6 PPEWKNF 12


>sp|HYD1D_PYRFU|SULFHYDROGENASE 1 subunit delta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GCPPHWKNF 9
GCPP K+F
Sbjct: 135 GCPPEKKDF 143


>sp|RS19_SULTO|SMALL ribosomal subunit protein uS19|Sulfurisphaera tokodaii (strain

Query: 3 PPHWKNF 9
PP WK F
Sbjct: 6 PPEWKKF 12


>sp|RS19_SULAC|SMALL ribosomal subunit protein uS19|Sulfolobus acidocaldarius (strain

Query: 3 PPHWKNF 9
PP WK F
Sbjct: 6 PPEWKKF 12


>sp|RS19_STAMF|SMALL ribosomal subunit protein uS19|Staphylothermus marinus (strain

Query: 3 PPHWKNF 9
PP WK F
Sbjct: 8 PPEWKKF 14


>sp|CDPAS_ARCFU|CDP-ARCHAEOL synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PPHWKNFT 10
PP WK FT
Sbjct: 140 PPFWKLFT 147


>sp|RS19_HYPBU|SMALL ribosomal subunit protein uS19|Hyperthermus butylicus (strain DSM

Query: 3 PPHWKNF 9
PP WK F
Sbjct: 9 PPEWKKF 15


>sp|AAT_SULAC|ASPARTATE aminotransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PHWKNFT 10
P WKNF+
Sbjct: 227 PDWKNFS 233


>sp|VHCG_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit G|Archaeoglobus profundus (strain

Query: 1 GCPPH 5
GCPPH
Sbjct: 165 GCPPH 169


>sp|MOBA_THESM|PROBABLE molybdenum cofactor guanylyltransferase|Thermococcus sibiricus

Query: 2 CPPHWKN 8
C P WKN
Sbjct: 117 CVPKWKN 123


>sp|UPPS_HALSA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Halobacterium

Query: 2 CPPHWKNFT 10
C P+W F+
Sbjct: 228 CTPYWPEFS 236


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 4 PHWKNF 9
PHWK +
Sbjct: 160 PHWKEY 165


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 PHWKNF 9
PHWK +
Sbjct: 200 PHWKGY 205


>sp|ENGB_META3|PROBABLE GTP-binding protein EngB|Methanococcus aeolicus (strain ATCC

Query: 1 GCPPHWKNF 9
GCP W+ +
Sbjct: 182 GCPAPWRQW 190


>sp|UPPS_HALMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Haloarcula

Query: 2 CPPHWKNF 9
C P+W F
Sbjct: 228 CTPYWPEF 235


>sp|Y709_METMP|PROBABLE minor pilin MMP0709|Methanococcus maripaludis (strain DSM 14266

Query: 6 WKNFT 10
WKNFT
Sbjct: 126 WKNFT 130


>sp|NADM_CALMQ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 PPHW 6
PPHW
Sbjct: 12 PPHW 15


>sp|Y1085_PICTO|PUTATIVE adenine deaminase PTO1085|Picrophilus torridus (strain ATCC 700027

Query: 3 PPHWKNF 9
PP WK +
Sbjct: 380 PPDWKGY 386


>sp|WTPC_PYRHO|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus horikoshii (strain

Query: 1 GCPPHWKNFT 10
G PP +NF+
Sbjct: 66 GLPPEKRNFS 75


>sp|ARGJ_ARCFU|ARGININE biosynthesis bifunctional protein ArgJ|Archaeoglobus fulgidus

Query: 1 GCPPHW 6
GC P+W
Sbjct: 287 GCDPNW 292


>sp|NADM_PYRAE|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PPHW 6
PPHW
Sbjct: 12 PPHW 15


>sp|RS15_SULAC|SMALL ribosomal subunit protein uS15|Sulfolobus acidocaldarius (strain

Query: 3 PPHWKNFT 10
PP W FT
Sbjct: 20 PPKWVRFT 27


>sp|IF2G_HALSA|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 3 PPHWKNF 9
PP W++F
Sbjct: 321 PPTWESF 327


>sp|IF2G_HALS3|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 3 PPHWKNF 9
PP W++F
Sbjct: 321 PPTWESF 327


>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 PPHWKNF 9
PP WK +
Sbjct: 79 PPEWKEY 85


>sp|TPIS_METKA|TRIOSEPHOSPHATE isomerase|Methanopyrus kandleri (strain AV19 /

Query: 2 CPPH 5
CPPH
Sbjct: 43 CPPH 46


>sp|NADM_PYRNV|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 PPHW 6
PPHW
Sbjct: 12 PPHW 15


>sp|FLUC_THEKO|FLUORIDE-SPECIFIC ion channel FluC|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PPHWKNF 9
PP W+ F
Sbjct: 62 PPDWRAF 68


>sp|NADM_PYRAR|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 PPHW 6
PPHW
Sbjct: 12 PPHW 15


>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 CPPH 5
CPPH
Sbjct: 384 CPPH 387


>sp|MOBA_THEGJ|PROBABLE molybdenum cofactor guanylyltransferase|Thermococcus gammatolerans

Query: 1 GCPPHWKN 8
C P W+N
Sbjct: 115 ACVPRWEN 122


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 HWKNF 9
HW+NF
Sbjct: 707 HWENF 711


>sp|SYS2_METBF|TYPE-2 serine--tRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 CPPHW 6
CPP W
Sbjct: 306 CPPFW 310


>sp|MOBA_THEKO|PROBABLE molybdenum cofactor guanylyltransferase|Thermococcus kodakarensis

Query: 1 GCPPHWKN 8
C P W N
Sbjct: 115 ACVPRWSN 122


>sp|MOBA_PYRHO|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus horikoshii

Query: 1 GCPPHWKN 8
C P W N
Sbjct: 117 ACVPRWSN 124


>sp|MOBA_PYRAB|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus abyssi (strain

Query: 1 GCPPHWKN 8
C P W N
Sbjct: 115 ACVPRWSN 122


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 2 CPPH 5
CPPH
Sbjct: 413 CPPH 416


>sp|MTAP_NITMS|S-METHYL-5'-THIOADENOSINE phosphorylase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 PPHWKNF 9
PPH NF
Sbjct: 63 PPHMINF 69


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GCPPHWKNF 9
G P +WK F
Sbjct: 274 GKPNYWKEF 282


>sp|COAD_THEKO|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GCPPHWK 7
G P HWK
Sbjct: 152 GRPLHWK 158


>sp|SYS2_METBU|TYPE-2 serine--tRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 CPPHW 6
CPP W
Sbjct: 306 CPPFW 310


>sp|Y1554_METJA|UNCHARACTERIZED protein MJ1554|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CPPHWKNF 9
CP W N+
Sbjct: 205 CPIVWNNY 212


>sp|CDC6Q_HALMA|ORC1-TYPE DNA replication protein 17|Haloarcula marismortui (strain ATCC

Query: 1 GCPPHWKN 8
G PPH K+
Sbjct: 308 GLPPHSKH 315


>sp|Y1394_ARCFU|UNCHARACTERIZED protein AF_1394|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GCPPHW 6
G PP W
Sbjct: 126 GLPPEW 131


>sp|NIFK_METTM|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter marburgensis

Query: 3 PPHWK 7
P HWK
Sbjct: 452 PQHWK 456


>sp|NIFK_METTH|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter

Query: 3 PPHWK 7
P HWK
Sbjct: 452 PQHWK 456


>sp|MOBA_PYRFU|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus furiosus (strain

Query: 1 GCPPHWKN 8
C P W N
Sbjct: 116 ACVPRWPN 123


>sp|Y002_METJA|UNCHARACTERIZED protein MJ0002|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 HWKNF 9
HWK F
Sbjct: 116 HWKGF 120


>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PPHWK 7
PP WK
Sbjct: 79 PPEWK 83


>sp|Y1272_IGNH4|UPF0179 protein Igni_1272|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 PHWKNFT 10
PHW++ T
Sbjct: 101 PHWRDCT 107




123|Sequence|611|620|WKNFTDKCYY

>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 WKNFTDKCY 9
WK+FTD+ +
Sbjct: 202 WKDFTDEGF 210


>sp|Y798_METJA|TPR repeat-containing protein MJ0798|Methanocaldococcus jannaschii

Query: 1 WKNFTDKCY 9
WKN DK Y
Sbjct: 105 WKNLGDKAY 113


>sp|Y1505_METJA|PUTATIVE ATP-dependent RNA helicase MJ1505|Methanocaldococcus jannaschii

Query: 2 KNFTDKCY 9
K F DKC+
Sbjct: 153 KKFKDKCH 160


>sp|SAHH_SULTO|ADENOSYLHOMOCYSTEINASE tokodaii (strain DSM 16993

Query: 1 WKNFTDKCYY 10
W+ T+K YY
Sbjct: 98 WRGETEKDYY 107


>sp|SAHH_SULAC|ADENOSYLHOMOCYSTEINASE acidocaldarius (strain ATCC 33909

Query: 1 WKNFTDKCYY 10
W+ T+K YY
Sbjct: 98 WRGETEKDYY 107


>sp|HIS5_METBF|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina barkeri (strain

Query: 2 KNFTDKC 8
KNF D C
Sbjct: 196 KNFVDMC 202


>sp|Y047_METJA|PROBABLE RNase MJ4|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NFTDKCYY 10
N+ DK YY
Sbjct: 124 NYNDKKYY 131


>sp|Y093_METJA|UNCHARACTERIZED protein MJ0093|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KNFTDKCY 9
+NF KCY
Sbjct: 2 ENFNFKCY 9


>sp|RPO12_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus shibatae (strain ATCC

Query: 1 WKNFTDK 7
WK FTD+
Sbjct: 10 WKTFTDE 16


>sp|RPO12_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus solfataricus (strain

Query: 1 WKNFTDK 7
WK FTD+
Sbjct: 10 WKTFTDE 16


>sp|RPO12_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 WKNFTDK 7
WK FTD+
Sbjct: 10 WKTFTDE 16


>sp|RPO12_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 WKNFTDK 7
WK FTD+
Sbjct: 10 WKTFTDE 16


>sp|RPO12_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 WKNFTDK 7
WK FTD+
Sbjct: 10 WKTFTDE 16


>sp|RPO12_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 WKNFTDK 7
WK FTD+
Sbjct: 10 WKTFTDE 16


>sp|RPO12_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 WKNFTDK 7
WK FTD+
Sbjct: 10 WKTFTDE 16


>sp|RPO12_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 WKNFTDK 7
WK FTD+
Sbjct: 10 WKTFTDE 16


>sp|HDRD_METMA|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina mazei (strain

Query: 1 WKNFTDKCY 9
W+ F +K Y
Sbjct: 55 WRQFMNKSY 63


>sp|GUAAA_PICTO|GMP synthase [glutamine-hydrolyzing] subunit A|Picrophilus torridus

Query: 1 WKNFTDKC 8
+KNF +KC
Sbjct: 179 FKNFIEKC 186


>sp|Y233_METJA|UNCHARACTERIZED protein MJ0233|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WKNFTDKCY 9
W N TD Y
Sbjct: 100 WNNITDLLY 108


>sp|HIS4_METST|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosphaera stadtmanae (strain

Query: 1 WKNFTDK 7
WK TDK
Sbjct: 140 WKESTDK 146


>sp|TRMY_METVS|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus vannielii

Query: 1 WKNFTDKCYY 10
WK T YY
Sbjct: 99 WKESTSGIYY 108




124|Sequence|616|625|DKCYYFSVEK

>sp|AATC_METTP|A-TYPE ATP synthase subunit C|Methanothrix thermoacetophila (strain DSM

Query: 1 DKCYYFSVEK 10
DK YYF +E+
Sbjct: 183 DKLYYFRMER 192


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 CYYFSVEK 10
CY F+VEK
Sbjct: 172 CYEFTVEK 179


>sp|KTHY_METTH|PROBABLE thymidylate kinase|Methanothermobacter thermautotrophicus (strain

Query: 1 DKCYYFSV 8
D+CYY S+
Sbjct: 91 DRCYYSSM 98


>sp|SYFA_HALSA|PHENYLALANINE--TRNA ligase alpha subunit|Halobacterium salinarum (strain ATCC 700922

Query: 5 YFSVEK 10
YFSVEK
Sbjct: 360 YFSVEK 365


>sp|SYFA_HALS3|PHENYLALANINE--TRNA ligase alpha subunit|Halobacterium salinarum (strain ATCC 29341

Query: 5 YFSVEK 10
YFSVEK
Sbjct: 360 YFSVEK 365


>sp|SEPS_METBU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DKCYYFS 7
D+CYY +
Sbjct: 92 DRCYYLA 98


>sp|Y1085_METJA|UNCHARACTERIZED protein MJ1085|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KCYYFSVEK 10
+ YYF++EK
Sbjct: 172 ELYYFAIEK 180


>sp|Y524_METJA|UNCHARACTERIZED protein MJ0524|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DKCYYF 6
DK YYF
Sbjct: 107 DKTYYF 112


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 DKCYYF 6
DKC+Y+
Sbjct: 99 DKCHYY 104


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 DKCYYF 6
DKC+Y+
Sbjct: 103 DKCHYY 108


>sp|Y1653_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 2 KCYYFSVEK 10
KC + SVE+
Sbjct: 376 KCLFLSVEE 384


>sp|PYCA_ARCFU|PYRUVATE carboxylase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DKCYY 5
D+CYY
Sbjct: 46 DECYY 50




125|Sequence|621|630|FSVEKEIFED

>sp|Y341_METJA|UNCHARACTERIZED protein MJ0341|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FSVEKEIFED 10
SVEKE+ ED
Sbjct: 51 LSVEKEMIED 60


>sp|METK_ARCFU|S-ADENOSYLMETHIONINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FSVEKEIFED 10
F+VE+ I+E+
Sbjct: 175 FNVERRIYEE 184


>sp|BAX1_ARCFU|ENDONUCLEASE Bax1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FSVEKEIFED 10
++V +EIFE+
Sbjct: 408 YAVRREIFEE 417


>sp|Y948_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB09480|Pyrococcus abyssi (strain GE5 /

Query: 1 FSVEKEIFE 9
+++EKE+FE
Sbjct: 270 YALEKELFE 278


>sp|Y403_METJA|MEMO1 family protein MJ0403|Methanocaldococcus jannaschii (strain ATCC

Query: 4 EKEIFED 10
EKE++ED
Sbjct: 225 EKELYED 231




126|Sequence|626|635|EIFEDAKLFC

>sp|TRPB1_SACS2|TRYPTOPHAN synthase beta chain 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EIFEDAKLF 9
EIFE AK+F
Sbjct: 356 EIFEAAKIF 364


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 EIFEDAK 7
EIFEDAK
Sbjct: 273 EIFEDAK 279


>sp|TRPB_THEON|TRYPTOPHAN synthase beta chain|Thermococcus onnurineus (strain NA1)

Query: 1 EIFEDAKLF 9
E+FE A+LF
Sbjct: 362 EVFEAARLF 370


>sp|ARNR_SULAC|HTH-TYPE transcriptional activator ArnR|Sulfolobus acidocaldarius (strain

Query: 1 EIFEDAKLF 9
E+FE+ KLF
Sbjct: 157 ELFEEKKLF 165


>sp|TRPB1_SULTO|TRYPTOPHAN synthase beta chain 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EIFEDAKLF 9
EI+E AK+F
Sbjct: 355 EIYEAAKIF 363


>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 1 EIFEDAKLF 9
E+FE+AK F
Sbjct: 67 ELFEEAKAF 75


>sp|NADE_THEKO|NH(3)-DEPENDENT NAD(+) synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 EDAKLFC 10
EDAKL C
Sbjct: 69 EDAKLVC 75


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EIFEDAK 7
EIFE+AK
Sbjct: 266 EIFEEAK 272


>sp|SYR_METVS|ARGININE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EIFEDAKL 8
E+FE+AKL
Sbjct: 383 ELFEEAKL 390


>sp|Y3513_METJA|MCM-LIKE protein MJECL13|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EIFEDAKLFC 10
E+F D K+FC
Sbjct: 152 ELFWDDKVFC 161


>sp|ECFA_METTH|ENERGY-COUPLING factor transporter ATP-binding protein|Methanothermobacter

Query: 1 EIFEDAKL 8
EIF DA+L
Sbjct: 223 EIFRDAEL 230


>sp|RL5_METHJ|LARGE ribosomal subunit protein uL5|Methanospirillum hungatei JF-1

Query: 4 EDAKLF 9
EDAKLF
Sbjct: 153 EDAKLF 158


>sp|SYH_METTH|HISTIDINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 IFEDAKLF 9
IFE+ KLF
Sbjct: 43 IFEELKLF 50




127|Sequence|631|640|AKLFCEDKSS

***** No hits found ******


128|Sequence|636|645|EDKSSHLVFI

>sp|Y3887_METAC|UPF0284 protein MA_3887|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EDKSSHLV 8
EDKS+H V
Sbjct: 270 EDKSAHFV 277


>sp|MTM1_METJA|TYPE II methyltransferase M.MjaI|Methanocaldococcus jannaschii (strain

Query: 1 EDKSSHLV 8
ED+S HLV
Sbjct: 24 EDESVHLV 31


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 1 EDKSSHLVF 9
EDK HL F
Sbjct: 321 EDKLGHLYF 329


>sp|HDRA_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanococcus

Query: 1 EDKSSHLVFI 10
E+K HLV I
Sbjct: 602 EEKDGHLVAI 611


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 KSSHLVFI 10
K+ HLVF+
Sbjct: 465 KNGHLVFV 472




129|Sequence|641|650|HLVFINTREE

>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HLVFINTREE 10
HLVF+ +R+E
Sbjct: 468 HLVFVGSRKE 477


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LVFINTR 8
LVF+NTR
Sbjct: 242 LVFVNTR 248


>sp|GUAAB_ARCFU|GMP synthase [glutamine-hydrolyzing] subunit B|Archaeoglobus fulgidus

Query: 2 LVFINTREE 10
LVFI+ +EE
Sbjct: 75 LVFIDAKEE 83


>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 2 LVFINTRE 9
LVF NTR+
Sbjct: 252 LVFANTRK 259


>sp|HUTI_PYRAR|IMIDAZOLONEPROPIONASE arsenaticum (strain DSM 13514

Query: 1 HLVFINTREE 10
HL+F +RE+
Sbjct: 74 HLLFAGSRED 83


>sp|GUAAB_PYRFU|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus furiosus

Query: 1 HLVFINT 7
H VF+NT
Sbjct: 54 HAVFVNT 60


>sp|GUAAB_PYRAB|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus abyssi

Query: 1 HLVFINT 7
H VF+NT
Sbjct: 49 HAVFVNT 55


>sp|GUAAB_PYRHO|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus horikoshii

Query: 1 HLVFINT 7
H VF+NT
Sbjct: 49 HAVFVNT 55


>sp|GUAAB_THEKO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermococcus

Query: 1 HLVFINT 7
H VF+NT
Sbjct: 48 HAVFVNT 54




130|Sequence|646|655|NTREEQQWIK

>sp|KCY_IGNH4|CYTIDYLATE kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 TREEQQWIK 10
+REE QWI+
Sbjct: 126 SREEVQWIR 134


>sp|Y1292_METPE|UPF0280 protein Mpal_1292|Methanosphaerula palustris (strain ATCC

Query: 4 EEQQWIK 10
EEQ WI+
Sbjct: 18 EEQAWIE 24


>sp|COFC_HALSA|2-PHOSPHO-L-LACTATE guanylyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 NTREEQQWI 9
NTR ++W+
Sbjct: 179 NTRRTREWL 187


>sp|COFC_HALS3|2-PHOSPHO-L-LACTATE guanylyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 NTREEQQWI 9
NTR ++W+
Sbjct: 179 NTRRTREWL 187


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 1 NTREEQQWI 9
N RE+ W+
Sbjct: 107 NLREQDSWV 115


>sp|Y305_METJA|UNCHARACTERIZED protein MJ0305|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NTREEQQWIK 10
NT E+ WI+
Sbjct: 82 NTNEKLTWIR 91


>sp|NROR_PYRFU|NAD(P)H:RUBREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NTREEQQWIK 10
NT+ E +WI+
Sbjct: 314 NTKGEGKWIE 323


>sp|Y600_ARCFU|UNCHARACTERIZED protein AF_0600|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TREEQQWIK 10
TRE ++W +
Sbjct: 246 TREPEKWFR 254




131|Sequence|651|660|QQWIKKQMVG

>sp|TIAS_SACI2|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Saccharolobus islandicus

Query: 1 QQWIKKQMV 9
+ W+KK+M+
Sbjct: 173 ENWLKKRMI 181


>sp|LYSZ_PYRCJ|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 3 WIKKQMVG 10
WI KQ+V
Sbjct: 78 WINKQLVA 85


>sp|RL24E_THEPD|LARGE ribosomal subunit protein eL24|Thermofilum pendens (strain DSM

Query: 1 QQWIKKQM 8
Q+W++KQ+
Sbjct: 51 QKWVRKQV 58


>sp|Y1136_SULTO|PUTATIVE ABC transporter ATP-binding protein|Sulfurisphaera tokodaii (strain

Query: 1 QQWIKKQMVG 10
Q W ++M+G
Sbjct: 415 QDWYNRKMLG 424


>sp|NADC_METTH|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 2 QWIKKQMV 9
QW +KQ V
Sbjct: 133 QWFEKQAV 140


>sp|LYSZ_PYRIL|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 3 WIKKQMVG 10
WI KQ+V
Sbjct: 78 WINKQIVA 85


>sp|HIS5_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 1 QQWIKKQ 7
Q WIKK+
Sbjct: 115 QVWIKKE 121


>sp|CCA_NANEQ|CCA-ADDING enzyme|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 QWIKKQMVG 10
+W+KK + G
Sbjct: 131 EWVKKNIKG 139


>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 1 QQWIKKQ 7
++W+KK+
Sbjct: 455 EEWVKKE 461


>sp|Y1029_THESM|UPF0282 protein TSIB_1029|Thermococcus sibiricus (strain DSM 12597

Query: 1 QQWIKKQM 8
++WI KQM
Sbjct: 194 KEWIIKQM 201




132|Sequence|656|665|KQMVGRESHW

>sp|DAPB_HALMA|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Haloarcula marismortui (strain ATCC 43049

Query: 3 MVGRESHW 10
+VGR+S W
Sbjct: 233 LVGRDSGW 240


>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 QMVGRESH 9
++VGRE H
Sbjct: 615 RLVGREEH 622


>sp|THI4_PYRAE|THIAMINE thiazole synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 QMVGRESHW 10
Q+VG +S W
Sbjct: 187 QVVGEKSAW 195


>sp|DMD_SACS2|DIPHOSPHOMEVALONATE decarboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KQMVGRESH 9
K++VG+E H
Sbjct: 81 KKIVGKEFH 89




133|Sequence|661|670|RESHWIGLTD

>sp|RRP4_PYRHO|EXOSOME complex component Rrp4|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RESHWIGLTD 10
RESH GLTD
Sbjct: 211 RESHTKGLTD 220


>sp|RRP4_THEKO|EXOSOME complex component Rrp4|Thermococcus kodakarensis (strain ATCC

Query: 1 RESHWIGLTD 10
RESH GLTD
Sbjct: 211 RESHTQGLTD 220


>sp|RRP4_PYRFU|EXOSOME complex component Rrp4|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RESHWIGLTD 10
RESH GLTD
Sbjct: 211 RESHTRGLTD 220


>sp|RRP4_PYRAE|EXOSOME complex component Rrp4|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ESHWIGLTD 10
ESH +GLTD
Sbjct: 209 ESHVMGLTD 217


>sp|RRP4_METFV|EXOSOME complex component Rrp4|Methanothermus fervidus (strain ATCC 43054

Query: 1 RESHWIGLTD 10
RE+H GLTD
Sbjct: 202 REAHTSGLTD 211


>sp|RRP4_PYRAB|EXOSOME complex component Rrp4|Pyrococcus abyssi (strain GE5 /

Query: 1 RESHWIGLTD 10
+ESH GLTD
Sbjct: 211 KESHTRGLTD 220


>sp|RRP4_METTH|EXOSOME complex component Rrp4|Methanothermobacter thermautotrophicus

Query: 1 RESHWIGLTD 10
RE+H GLTD
Sbjct: 202 REAHTSGLTD 211


>sp|RRP4_PICTO|EXOSOME complex component Rrp4|Picrophilus torridus (strain ATCC 700027

Query: 1 RESHWIGLTD 10
+E+H GLTD
Sbjct: 200 KEAHTFGLTD 209


>sp|RRP4_METBU|EXOSOME complex component Rrp4|Methanococcoides burtonii (strain DSM 6242

Query: 2 ESHWIGLTD 10
ESH GLTD
Sbjct: 199 ESHMSGLTD 207


>sp|PORA_PYRAB|PYRUVATE synthase subunit PorA|Pyrococcus abyssi (strain GE5 /

Query: 4 HWIGL 8
HWIGL
Sbjct: 386 HWIGL 390


>sp|PUR7_SULTO|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ESHWIGLTD 10
E+H+IG+ D
Sbjct: 65 ETHYIGMFD 73


>sp|PUR7_SACS2|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ESHWIGLTD 10
E+H++G+ D
Sbjct: 65 ETHYVGMKD 73


>sp|PORA_PYRHO|PYRUVATE synthase subunit PorA|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 HWIGL 8
HWIGL
Sbjct: 386 HWIGL 390


>sp|RRP4_SACS2|EXOSOME complex component Rrp4|Saccharolobus solfataricus (strain ATCC

Query: 2 ESHWIGLTD 10
ESH GLTD
Sbjct: 217 ESHIKGLTD 225


>sp|RRP4_METKA|EXOSOME complex component Rrp4|Methanopyrus kandleri (strain AV19 /

Query: 1 RESHWIGLTD 10
R SH GLTD
Sbjct: 218 RRSHLRGLTD 227


>sp|Y1281_ARCFU|UNCHARACTERIZED protein AF_1281|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RESHWIGLTD 10
R + WIG+ D
Sbjct: 116 RMTSWIGIRD 125


>sp|HTR4_HALSA|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 700922

Query: 1 RESHWIGLTD 10
R+ H++ LTD
Sbjct: 116 RDIHYVSLTD 125


>sp|HTR4_HALS3|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 29341

Query: 1 RESHWIGLTD 10
R+ H++ LTD
Sbjct: 116 RDIHYVSLTD 125


>sp|RRP4_THEPD|EXOSOME complex component Rrp4|Thermofilum pendens (strain DSM 2475

Query: 2 ESHWIGLTD 10
E+H GLTD
Sbjct: 217 EAHTTGLTD 225


>sp|Y597_METJA|UNCHARACTERIZED protein MJ0597|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RESHWI 6
+E+HWI
Sbjct: 280 KEAHWI 285


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 ESHWIGLT 9
E WIG T
Sbjct: 772 EDRWIGFT 779


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ESHWIGLT 9
E WIG T
Sbjct: 772 EDRWIGFT 779


>sp|Y2123_ARCFU|UNCHARACTERIZED protein AF_2123|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SHWIGLTD 10
SH++GL D
Sbjct: 106 SHFVGLID 113


>sp|ACYP_METBU|ACYLPHOSPHATASE burtonii (strain DSM 6242

Query: 2 ESHWIGLTD 10
E W+GL+D
Sbjct: 79 EVGWMGLSD 87


>sp|RRP4_SULTO|EXOSOME complex component Rrp4|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RESHWIGLTD 10
+ESH GLT+
Sbjct: 213 KESHIKGLTE 222


>sp|RRP4_ARCFU|EXOSOME complex component Rrp4|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RESHWIGLTD 10
+E+H GLTD
Sbjct: 198 QEAHTEGLTD 207


>sp|SYR_THESM|ARGININE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 RESHWIGLT 9
R+ WIG T
Sbjct: 443 RKGTWIGFT 451


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 ESHWIGLT 9
E WIG T
Sbjct: 854 EDRWIGFT 861




134|Sequence|666|675|IGLTDSEREN

>sp|PHR_HALSA|DEOXYRIBODIPYRIMIDINE photo-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 4 TDSEREN 10
TD EREN
Sbjct: 270 TDDEREN 276


>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 1 IGLTDSEREN 10
IGL DSE E+
Sbjct: 4 IGLADSELES 13


>sp|COFC_METHJ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LTDSEREN 10
LTD ERE+
Sbjct: 29 LTDEERED 36


>sp|PURL_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IGLTDSER 8
+GLTD ER
Sbjct: 178 VGLTDDER 185


>sp|HEM4_METJA|PUTATIVE uroporphyrinogen-III synthase|Methanocaldococcus jannaschii

Query: 3 LTDSEREN 10
LT++EREN
Sbjct: 65 LTENEREN 72


>sp|DP2S_PYRFU|DNA polymerase II small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IGLTDSERE 9
IGL +S+RE
Sbjct: 264 IGLVNSKRE 272


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 IGLTDSERE 9
IGL +S+RE
Sbjct: 270 IGLVNSKRE 278


>sp|SYFA_METMP|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain DSM 14266

Query: 3 LTDSEREN 10
L++SEREN
Sbjct: 350 LSESEREN 357


>sp|Y065_METJA|UNCHARACTERIZED protein MJ0065|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IGLTDSERE 9
IG+TD +R+
Sbjct: 291 IGITDGDRD 299


>sp|PURP_SACS2|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Saccharolobus solfataricus (strain

Query: 3 LTDSEREN 10
+TD++REN
Sbjct: 28 ITDNKREN 35


>sp|IF2P_PYRFU|PROBABLE translation initiation factor IF-2|Pyrococcus furiosus (strain ATCC

Query: 1 IGLTDSER 8
+G TDSE+
Sbjct: 239 VGFTDSEK 246




135|Sequence|671|680|SERENEWKWL

>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 SERENEWKWL 10
+E E +WKW+
Sbjct: 989 AETEGDWKWV 998


Query: 4 ENEWKWL 10
E +WKW+
Sbjct: 708 EGDWKWV 714


>sp|PYRG_HALMA|CTP synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 ERENEWK 8
EREN W+
Sbjct: 286 ERENRWR 292


>sp|PYRG_HALHT|CTP synthase|Haloarcula hispanica (strain ATCC 33960

Query: 2 ERENEWK 8
EREN W+
Sbjct: 286 ERENRWR 292


>sp|PURP_METTP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothrix thermoacetophila (strain

Query: 1 SERENEWKWL 10
S+RE E +WL
Sbjct: 122 SDREMEREWL 131


>sp|DTDA_PYRIL|D-AMINOACYL-TRNA deacylase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 ENEWK 8
ENEWK
Sbjct: 141 ENEWK 145


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SERENEWKWL 10
SERE++ WL
Sbjct: 652 SEREDDINWL 661


>sp|PURP_METBF|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 1 SERENEWKWL 10
S+R+ E +WL
Sbjct: 122 SDRDKEREWL 131


>sp|PURP_METAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina acetivorans (strain ATCC

Query: 1 SERENEWKWL 10
S+R+ E +WL
Sbjct: 122 SDRDKEREWL 131


>sp|RADA_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 1 SERENEWK 8
S+R+N WK
Sbjct: 103 SQRKNIWK 110


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 4 ENEWKWL 10
E EW WL
Sbjct: 265 EVEWPWL 271


>sp|PURP_METBU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcoides burtonii (strain DSM

Query: 1 SERENEWKWL 10
S+R+ E +WL
Sbjct: 122 SDRDKEREWL 131


>sp|GGR_META3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 ERENEWK 8
E EN WK
Sbjct: 322 EYENRWK 328


>sp|NTPTH_CALMQ|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Caldivirga maquilingensis (strain ATCC 700844

Query: 6 EWKWL 10
EW+WL
Sbjct: 59 EWRWL 63


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 6 EWKWL 10
EW+WL
Sbjct: 334 EWEWL 338




136|Sequence|676|685|EWKWLDGTSP

>sp|KTHY_THEAC|PROBABLE thymidylate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 WKWLDGTS 9
W+W+D S
Sbjct: 104 WEWMDSVS 111


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 EWKWLDG 7
+WKW+ G
Sbjct: 710 DWKWVTG 716


Query: 1 EWKWLDG 7
+WKW+ G
Sbjct: 994 DWKWVTG 1000


>sp|NTPTH_CALMQ|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 EWKWL 5
EW+WL
Sbjct: 59 EWRWL 63


>sp|RFCL_IGNH4|REPLICATION factor C large subunit|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 KWLDGTSP 10
KWL GT P
Sbjct: 34 KWLSGTPP 41


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EWKWLD 6
+W+W+D
Sbjct: 663 KWEWMD 668


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 1 EWKWL 5
EW+WL
Sbjct: 334 EWEWL 338


>sp|ACDE_METSH|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanothrix

Query: 1 EWKWLDG 7
+WK LDG
Sbjct: 110 DWKGLDG 116


>sp|TRUD_SACS2|PROBABLE tRNA pseudouridine synthase D|Saccharolobus solfataricus (strain

Query: 1 EWKWLDGT 8
+W LDGT
Sbjct: 19 DWNELDGT 26


>sp|MTNA_PYRAB|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus abyssi (strain

Query: 4 WLDGTSP 10
WLD T P
Sbjct: 197 WLDETRP 203


>sp|MTNA_PYRHO|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus horikoshii

Query: 4 WLDGTSP 10
WLD T P
Sbjct: 197 WLDETRP 203


>sp|MTNA_PYRFU|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus furiosus (strain

Query: 4 WLDGTSP 10
WLD T P
Sbjct: 197 WLDETRP 203


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EWKWLDGTSP 10
+ KWL SP
Sbjct: 234 DMKWLSKNSP 243


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EWKWL 5
EW WL
Sbjct: 267 EWPWL 271


>sp|RL14_NANEQ|LARGE ribosomal subunit protein uL14|Nanoarchaeum equitans (strain

Query: 1 EWKWLDGT 8
EW+ DGT
Sbjct: 79 EWRRRDGT 86


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 2 WKWLD 6
WKW D
Sbjct: 773 WKWAD 777


>sp|DPOL2_SACS2|DNA polymerase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EWKWLDG 7
+WK LDG
Sbjct: 130 KWKTLDG 136


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 WKWL 5
WKWL
Sbjct: 713 WKWL 716


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 4 WLDGTSP 10
+LDGT P
Sbjct: 463 YLDGTDP 469




137|Sequence|681|690|DGTSPDYKNW

>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 DGTSPDYKNW 10
D PDY +W
Sbjct: 267 DADEPDYSDW 276


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 SPDYKNW 10
SP+Y++W
Sbjct: 268 SPEYRDW 274


>sp|KTHY_METHJ|PROBABLE thymidylate kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DGTSPDYKNW 10
DG PD + W
Sbjct: 101 DGIIPDPRTW 110


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DGTSPDYKN 9
DG P+YKN
Sbjct: 397 DGEIPEYKN 405


>sp|CBIE_METJA|PROBABLE cobalt-precorrin-7 C(5)-methyltransferase|Methanocaldococcus

Query: 1 DGTSPDYKNW 10
+G +PD K W
Sbjct: 163 NGINPDTKIW 172


>sp|END3_SULAC|ENDONUCLEASE III|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GTSPDYKN 9
G+SP YK+
Sbjct: 162 GSSPKYKD 169


>sp|THIC_METMP|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GTSPDY 7
GTSPD+
Sbjct: 67 GTSPDF 72


>sp|THIC_METM7|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 GTSPDY 7
GTSPD+
Sbjct: 67 GTSPDF 72


>sp|THIC_METM6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C6 /

Query: 2 GTSPDY 7
GTSPD+
Sbjct: 67 GTSPDF 72


>sp|FEN_THEON|FLAP endonuclease 1|Thermococcus onnurineus (strain NA1)

Query: 1 DGTSPDYK 8
DG PD+K
Sbjct: 80 DGKPPDFK 87


>sp|THIC_METVS|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GTSPDY 7
GTSPD+
Sbjct: 67 GTSPDF 72


>sp|THIC_METM5|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C5 /

Query: 2 GTSPDY 7
GTSPD+
Sbjct: 67 GTSPDF 72


>sp|FEN_THEKO|FLAP endonuclease 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DGTSPDYK 8
DG PD+K
Sbjct: 80 DGKPPDFK 87


>sp|Y1756_METM5|UNCHARACTERIZED solute-binding protein MmarC5_1756|Methanococcus maripaludis

Query: 1 DGTSPDYKNW 10
D PDY +W
Sbjct: 103 DMMMPDYADW 112


>sp|ADEC_METJA|ADENINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DGTSPDYKNW 10
DG P K W
Sbjct: 188 DGHCPKLKGW 197


>sp|FEN_METBU|FLAP endonuclease 1|Methanococcoides burtonii (strain DSM 6242

Query: 1 DGTSPDYKN 9
DG PD+K+
Sbjct: 80 DGKPPDFKS 88


>sp|THIC_ARCFU|PHOSPHOMETHYLPYRIMIDINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GTSPDYKN 9
GTS DY N
Sbjct: 68 GTSADYIN 75


>sp|Y925_METM7|UNCHARACTERIZED solute-binding protein MmarC7_0925|Methanococcus maripaludis

Query: 1 DGTSPDYKNW 10
D PDY +W
Sbjct: 100 DMMMPDYADW 109


>sp|PYRG_META3|CTP synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DGTSPDYKNW 10
+ + PD K W
Sbjct: 267 NNSKPDLKEW 276


Query: 2 GTSPDYK 8
GTSPD K
Sbjct: 487 GTSPDGK 493


>sp|Y1652_METMP|UNCHARACTERIZED solute-binding protein MMP1652|Methanococcus maripaludis (strain

Query: 5 PDYKNW 10
PDY +W
Sbjct: 92 PDYADW 97


>sp|UBIX_ARCFU|FLAVIN prenyltransferase UbiX|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GTSPDYKNW 10
G DY+ W
Sbjct: 173 GVEVDYRRW 181


>sp|RL3_METB6|LARGE ribosomal subunit protein uL3|Methanoregula boonei (strain DSM

Query: 5 PDYKNW 10
P YK+W
Sbjct: 25 PKYKSW 30


>sp|KTHY_METMJ|PROBABLE thymidylate kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DGTSPDYKNW 10
DG PD +W
Sbjct: 101 DGVLPDPLSW 110


>sp|DTDA_CENSY|D-AMINOACYL-TRNA deacylase|Cenarchaeum symbiosum (strain A)

Query: 1 DGTSPDYKNW 10
+G PD K W
Sbjct: 22 EGMEPDGKIW 31


>sp|Y687_METJA|UNCHARACTERIZED protein MJ0687|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DGTSPDYKN 9
DG + +YKN
Sbjct: 174 DGVTIEYKN 182




138|Sequence|686|695|DYKNWKAGQP

>sp|SYR_METMA|ARGININE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YKNWKAGQ 9
Y WKAGQ
Sbjct: 316 YHEWKAGQ 323


>sp|SYR_METBF|ARGININE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 YKNWKAGQ 9
Y WKAGQ
Sbjct: 316 YHEWKAGQ 323


>sp|SYR_METAC|ARGININE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YKNWKAGQ 9
Y WKAGQ
Sbjct: 314 YHEWKAGQ 321


>sp|RFCL_METS3|REPLICATION factor C large subunit|Methanobrevibacter smithii (strain ATCC

Query: 4 NWKAGQP 10
NWKAG P
Sbjct: 31 NWKAGNP 37


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 3 KNWKAGQP 10
K WKAG+P
Sbjct: 30 KAWKAGKP 37


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 DYKNWKAGQP 10
+Y W+ G+P
Sbjct: 1017 EYAGWEGGEP 1026


>sp|Y1356_METJA|UNCHARACTERIZED protein MJ1356|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DYKNWKAG 8
D+KNW G
Sbjct: 72 DFKNWIKG 79


>sp|SYC_STAMF|CYSTEINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 YKNWKAGQP 10
+K WK G+P
Sbjct: 184 WKAWKPGEP 192


>sp|RF11_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 3 KNWKAGQP 10
+ WK G+P
Sbjct: 341 RRWKPGEP 348


>sp|SYC_SULAC|CYSTEINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YKNWKAGQP 10
+K WK G+P
Sbjct: 183 WKAWKPGEP 191


>sp|SYC_SACS2|CYSTEINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YKNWKAGQP 10
+K WK G+P
Sbjct: 184 WKAWKPGEP 192


>sp|RF1_METMA|PEPTIDE chain release factor subunit|Methanosarcina mazei (strain ATCC

Query: 3 KNWKAGQP 10
+ WK G+P
Sbjct: 341 RRWKPGEP 348


>sp|SYC_SULTO|CYSTEINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YKNWKAGQP 10
+K WK G+P
Sbjct: 182 WKAWKPGEP 190


>sp|DOXA_ACIAM|THIOSULFATE dehydrogenase [quinone] small subunit|Acidianus ambivalens

Query: 1 DYKNWKAG 8
DY NW +G
Sbjct: 113 DYTNWYSG 120


>sp|NADE_METB6|NH(3)-DEPENDENT NAD(+) synthetase|Methanoregula boonei (strain DSM 21154

Query: 5 WKAGQP 10
WKAG P
Sbjct: 217 WKAGTP 222


>sp|KAE1_PYRAE|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum aerophilum

Query: 3 KNWKAGQP 10
K WK+G P
Sbjct: 210 KLWKSGTP 217


>sp|PUR7_METJA|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DYKNWKAGQP 10
DYKN + G P
Sbjct: 127 DYKNDEYGDP 136


>sp|CYAS_METMA|CYSTEATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YKNWKAGQ 9
Y WKAG+
Sbjct: 273 YNAWKAGR 280


>sp|SYC_PYRCJ|CYSTEINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 YKNWKAGQP 10
+K+W G+P
Sbjct: 188 WKSWSPGEP 196


>sp|TFE_METJA|TRANSCRIPTION factor E|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DYKNWK 6
DYK WK
Sbjct: 64 DYKRWK 69


>sp|ADPP_METJA|ADP-RIBOSE pyrophosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DYKNWKAG 8
DY WK G
Sbjct: 162 DYMRWKNG 169


>sp|RADA_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain ATCC

Query: 1 DYKNW 5
DY NW
Sbjct: 298 DYNNW 302


>sp|SYC_PYRNV|CYSTEINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 YKNWKAGQP 10
+K+W G+P
Sbjct: 188 WKSWTPGEP 196


>sp|SYC_PYRIL|CYSTEINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 YKNWKAGQP 10
+K+W G+P
Sbjct: 188 WKSWTPGEP 196


>sp|RS4E_METBF|SMALL ribosomal subunit protein eS4|Methanosarcina barkeri (strain

Query: 3 KNWKAGQ 9
++WKAG+
Sbjct: 11 RSWKAGK 17


>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 YKNWKAGQP 10
+K+W G+P
Sbjct: 190 WKSWTPGEP 198


>sp|SYC_PYRAR|CYSTEINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 YKNWKAGQP 10
+K+W G+P
Sbjct: 188 WKSWTPGEP 196


>sp|SYC_METVS|CYSTEINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 YKNWKAGQP 10
+KN K+G+P
Sbjct: 183 WKNKKSGEP 191


>sp|Y1659_ARCFU|UNCHARACTERIZED protein AF_1659|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DYKNWKAGQP 10
D +WK G+P
Sbjct: 55 DIYDWKPGEP 64


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 DYKNWK 6
+YK+WK
Sbjct: 745 NYKDWK 750


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YKNWK 6
YKNW+
Sbjct: 511 YKNWR 515


>sp|GGR_HALVD|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Haloferax volcanii (strain ATCC 29605

Query: 1 DYKNW 5
D+KNW
Sbjct: 96 DFKNW 100


>sp|Y009_METJA|UNCHARACTERIZED protein MJ0009|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YKNWK 6
YKNW+
Sbjct: 83 YKNWE 87




139|Sequence|691|700|KAGQPDNWGH

>sp|Y1234_STAMF|UPF0200 protein Smar_1234|Staphylothermus marinus (strain ATCC 43588

Query: 1 KAGQPDNW 8
+ G PDNW
Sbjct: 125 RPGDPDNW 132


>sp|FLPA_METMZ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanosarcina mazei

Query: 2 AGQPDNWGH 10
AG+PD++ H
Sbjct: 126 AGKPDSYAH 134


>sp|FLPA_METMA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanosarcina mazei (strain ATCC

Query: 2 AGQPDNWGH 10
AG+PD++ H
Sbjct: 126 AGKPDSYAH 134


>sp|FLPA_METAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanosarcina acetivorans (strain

Query: 2 AGQPDNWGH 10
AG+PD++ H
Sbjct: 126 AGKPDSYAH 134


>sp|FLPA_METBF|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanosarcina barkeri (strain

Query: 2 AGQPDNWGH 10
AG+PD++ H
Sbjct: 126 AGKPDSYSH 134


>sp|NADM_PYRAE|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 QPDNWGH 10
QP +WGH
Sbjct: 11 QPPHWGH 17


>sp|PINA_SACI5|HOLLIDAY junction branch migration ATPase|Saccharolobus islandicus (strain

Query: 1 KAGQPDNW 8
K G+P NW
Sbjct: 149 KKGKPGNW 156


>sp|NADM_CALMQ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 QPDNWGH 10
QP +WGH
Sbjct: 11 QPPHWGH 17


>sp|NADM_PYRAR|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 QPDNWGH 10
QP +WGH
Sbjct: 11 QPPHWGH 17


>sp|NADM_PYRNV|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 QPDNWGH 10
QP +WGH
Sbjct: 11 QPPHWGH 17


>sp|TIAS_THEGJ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus gammatolerans

Query: 4 QPDNWG 9
+P+NWG
Sbjct: 166 EPENWG 171


>sp|BRIX_PYRAB|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus abyssi

Query: 4 QPDNWGH 10
PD+WG+
Sbjct: 72 HPDDWGY 78


>sp|GLMU_METM7|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain C7 /

Query: 1 KAGQPDNWG 9
K G P+N+G
Sbjct: 122 KVGHPENFG 130


>sp|IF2A_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 KAGQPDNW 8
KAG P+ W
Sbjct: 163 KAGVPEEW 170


>sp|FAU1_HALSA|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 700922

Query: 5 PDNWG 9
PDNWG
Sbjct: 196 PDNWG 200


>sp|FAU1_HALS3|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 29341

Query: 5 PDNWG 9
PDNWG
Sbjct: 196 PDNWG 200


>sp|SPSS2_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocella arvoryzae (strain DSM 22066

Query: 1 KAGQPDNW 8
K QP NW
Sbjct: 350 KRSQPQNW 357


>sp|PUR5_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 KAGQPDNWGH 10
K G+P + GH
Sbjct: 35 KVGEPGDIGH 44


>sp|IF2A_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 KAGQPDNWG 9
KAG P+ W
Sbjct: 154 KAGVPEEWA 162


>sp|TIAS_ACIS3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Acidilobus saccharovorans

Query: 4 QPDNWG 9
+P+NWG
Sbjct: 171 RPENWG 176


>sp|TSR3_SULTO|16S rRNA aminocarboxypropyltransferase|Sulfurisphaera tokodaii

Query: 2 AGQPDNWG 9
AG P N+G
Sbjct: 89 AGNPTNYG 96


>sp|Y763_ARCFU|UNCHARACTERIZED protein AF_0763|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GQPDNW 8
G PD+W
Sbjct: 58 GYPDDW 63


>sp|UVRB_METBU|UVRABC system protein B|Methanococcoides burtonii (strain DSM 6242

Query: 3 GQPDNW 8
G PD W
Sbjct: 148 GSPDEW 153


>sp|FRHB_METVO|COENZYME F420 hydrogenase subunit beta|Methanococcus voltae

Query: 3 GQPDNW 8
G PD W
Sbjct: 210 GSPDGW 215


>sp|FRHB_METTH|COENZYME F420 hydrogenase subunit beta|Methanothermobacter

Query: 3 GQPDNW 8
G PD W
Sbjct: 211 GSPDGW 216


>sp|PUR5_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KAGQPDNWGH 10
K G+P + GH
Sbjct: 35 KIGEPGDIGH 44


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 KAGQPDNWGH 10
K+G+ DN+ H
Sbjct: 321 KSGKRDNYYH 330


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 PDNW 8
PDNW
Sbjct: 152 PDNW 155


>sp|FRHB_METJA|COENZYME F420 hydrogenase subunit beta|Methanocaldococcus jannaschii (strain

Query: 3 GQPDNW 8
G PD W
Sbjct: 217 GSPDGW 222


>sp|PUR5_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KAGQPDNWGH 10
K G+P + GH
Sbjct: 35 KLGEPGDIGH 44


>sp|RL22_METB6|LARGE ribosomal subunit protein uL22|Methanoregula boonei (strain DSM

Query: 1 KAGQPDNW 8
K G P NW
Sbjct: 71 KRGLPGNW 78


>sp|Y488_METKA|PROTEIN MK0488|Methanopyrus kandleri (strain AV19 /

Query: 1 KAGQPDNW 8
KAG P +W
Sbjct: 166 KAGLPPDW 173


>sp|Y866_ARCFU|UNCHARACTERIZED sugar kinase AF_0866|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KAGQPDNW 8
KAG D+W
Sbjct: 174 KAGTVDSW 181


>sp|Y516_AERPE|UPF0113 protein APE_0516.1|Aeropyrum pernix (strain ATCC 700893

Query: 3 GQPDNWG 9
GQP WG
Sbjct: 143 GQPLGWG 149


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KAGQPDNW 8
+AGQ D W
Sbjct: 341 QAGQYDGW 348


>sp|FRHB_METBF|COENZYME F420 hydrogenase subunit beta|Methanosarcina barkeri (strain Fusaro

Query: 3 GQPDNW 8
G PD W
Sbjct: 216 GSPDGW 221


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KAGQPDNWG 9
K G+P WG
Sbjct: 583 KFGEPVRWG 591


>sp|CAS8B_HALVD|CRISPR-ASSOCIATED protein Cas8b|Haloferax volcanii (strain ATCC 29605

Query: 3 GQPDNW 8
G PD W
Sbjct: 144 GHPDGW 149


>sp|AGL6_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl6|Haloferax volcanii

Query: 5 PDNWGH 10
PD W H
Sbjct: 253 PDGWRH 258


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 QPDNWG 9
+P NWG
Sbjct: 455 RPSNWG 460




140|Sequence|696|705|DNWGHGHGPG

>sp|RL4_ARCFU|LARGE ribosomal subunit protein uL4|Archaeoglobus fulgidus (strain ATCC

Query: 1 DNWGHGHG 8
+NWG GHG
Sbjct: 59 ENWGPGHG 66


>sp|RFCL_PYRFU|REPLICATION factor C large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DNWGHGHGP 9
++W HGH P
Sbjct: 33 ESWLHGHPP 41


>sp|DNLI_METAR|DNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 WGHGHGPG 10
WGHG G
Sbjct: 441 WGHGRKAG 448


>sp|RL4_METKA|LARGE ribosomal subunit protein uL4|Methanopyrus kandleri (strain AV19

Query: 1 DNWGHGHG 8
++WG GHG
Sbjct: 59 ESWGAGHG 66


>sp|DNLI1_THEPD|DNA ligase 1|Thermofilum pendens (strain DSM 2475

Query: 3 WGHGHGPG 10
WGHG G
Sbjct: 407 WGHGRRSG 414


>sp|CS3HD_THETK|CRISPR-ASSOCIATED endonuclease Cas3-HD|Thermoproteus tenax (strain ATCC 35583

Query: 1 DNWGHGHGPG 10
DNWG PG
Sbjct: 201 DNWGARGRPG 210


>sp|RL4_METTP|LARGE ribosomal subunit protein uL4|Methanothrix thermoacetophila

Query: 2 NWGHGHG 8
+WG GHG
Sbjct: 60 SWGPGHG 66


>sp|Y1530_METJA|UNCHARACTERIZED N-acetyltransferase MJ1530|Methanocaldococcus jannaschii (strain

Query: 2 NWGHGH 7
+WG+GH
Sbjct: 60 DWGNGH 65


>sp|AATB_METVS|A-TYPE ATP synthase subunit B|Methanococcus vannielii (strain ATCC 35089

Query: 4 GHGHGPG 10
G+G GPG
Sbjct: 358 GNGQGPG 364


>sp|AATB_METJA|A-TYPE ATP synthase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 4 GHGHGPG 10
G+G GPG
Sbjct: 358 GNGQGPG 364


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 4 GHGHG 8
GHGHG
Sbjct: 362 GHGHG 366


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 4 GHGHGPG 10
GH HG G
Sbjct: 790 GHNHGAG 796


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GHGHGPG 10
GH HG G
Sbjct: 790 GHNHGAG 796


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DNWGHGH 7
DN+GH H
Sbjct: 114 DNYGHTH 120


>sp|AROC_METKA|CHORISMATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 NWGHGHGPG 10
WG HGP
Sbjct: 12 TWGESHGPA 20


>sp|NCPP_THEKO|PROBABLE inosine/xanthosine triphosphatase|Thermococcus kodakarensis (strain

Query: 6 GHGPG 10
GHGPG
Sbjct: 103 GHGPG 107


>sp|NADK_HALSA|NAD kinase|Halobacterium salinarum (strain ATCC 700922

Query: 4 GHGHG 8
GHGHG
Sbjct: 150 GHGHG 154


>sp|NADK_HALS3|NAD kinase|Halobacterium salinarum (strain ATCC 29341

Query: 4 GHGHG 8
GHGHG
Sbjct: 150 GHGHG 154


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DNWGHGH 7
DN+GH H
Sbjct: 96 DNYGHTH 102


>sp|SAHH_HALWC|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16854

Query: 1 DNWGHG 6
D+W HG
Sbjct: 426 DSWSHG 431


>sp|MTXH_METBF|PUTATIVE methyltransferase mtx subunit H|Methanosarcina barkeri (strain

Query: 3 WGHGHGPG 10
WGH G G
Sbjct: 219 WGHPTGSG 226


>sp|TSR3_METMA|16S rRNA aminocarboxypropyltransferase|Methanosarcina mazei (strain

Query: 2 NWGH 5
NWGH
Sbjct: 140 NWGH 143


>sp|TSR3_METBU|16S rRNA aminocarboxypropyltransferase|Methanococcoides burtonii

Query: 2 NWGH 5
NWGH
Sbjct: 140 NWGH 143


>sp|TSR3_METBF|16S rRNA aminocarboxypropyltransferase|Methanosarcina barkeri (strain

Query: 2 NWGH 5
NWGH
Sbjct: 140 NWGH 143


>sp|TSR3_METAC|16S rRNA aminocarboxypropyltransferase|Methanosarcina acetivorans

Query: 2 NWGH 5
NWGH
Sbjct: 141 NWGH 144


>sp|GLCD1_VULM7|GLUCOSE 1-dehydrogenase 1|Vulcanisaeta moutnovskia (strain 768-28)

Query: 2 NWGH 5
NWGH
Sbjct: 336 NWGH 339


>sp|SAHH_HALWD|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16790

Query: 1 DNWGHG 6
D+W HG
Sbjct: 426 DSWSHG 431


>sp|DNAJ_METAC|CHAPERONE protein DnaJ|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 HGHGPG 10
HGHG G
Sbjct: 318 HGHGKG 323


>sp|RLME_THEAC|RIBOSOMAL RNA large subunit methyltransferase|Thermoplasma acidophilum

Query: 2 NWGH 5
NWGH
Sbjct: 164 NWGH 167


>sp|Y1533_SACS2|PUTATIVE dioxygenase SSO1533|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GHGHGP 9
GH HGP
Sbjct: 329 GHIHGP 334


>sp|MTXH_METMA|PUTATIVE methyltransferase mtx subunit H|Methanosarcina mazei (strain ATCC

Query: 3 WGHGHGPG 10
WGH G G
Sbjct: 219 WGHPTGSG 226


>sp|ENDA_THEVO|TRNA-SPLICING endonuclease|Thermoplasma volcanium (strain ATCC 51530

Query: 2 NWGHGHGP 9
N GHGP
Sbjct: 12 NVSEGHGP 19


>sp|RL22_SULTO|LARGE ribosomal subunit protein uL22|Sulfurisphaera tokodaii (strain

Query: 3 WGHGHG 8
W H HG
Sbjct: 63 WKHSHG 68


>sp|SECY_METTH|PROTEIN translocase subunit SecY|Methanothermobacter thermautotrophicus

Query: 3 WGHGHGPG 10
WG G G G
Sbjct: 168 WGFGSGVG 175


>sp|RL4_METMJ|LARGE ribosomal subunit protein uL4|Methanoculleus marisnigri (strain

Query: 1 DNWGHGHG 8
++WG G G
Sbjct: 59 ESWGSGRG 66


>sp|AROC_ARCFU|CHORISMATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WGHGHG 8
WG HG
Sbjct: 13 WGESHG 18


>sp|RFCL_PYRHO|REPLICATION factor C large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DNWGHGHGP 9
++W HG+ P
Sbjct: 33 ESWLHGNPP 41


>sp|AROC_METMA|CHORISMATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 WGHGHG 8
WG HG
Sbjct: 15 WGESHG 20


>sp|AROC_METVS|CHORISMATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 WGHGHG 8
WG HG
Sbjct: 14 WGESHG 19


>sp|RL4_THEKO|LARGE ribosomal subunit protein uL4|Thermococcus kodakarensis (strain

Query: 1 DNWGHGHG 8
+N G GHG
Sbjct: 59 ENIGKGHG 66


>sp|AROC_METBF|CHORISMATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 WGHGHG 8
WG HG
Sbjct: 15 WGESHG 20


>sp|RL4_THEON|LARGE ribosomal subunit protein uL4|Thermococcus onnurineus (strain

Query: 1 DNWGHGHG 8
+N G GHG
Sbjct: 59 ENIGKGHG 66


>sp|AROC_METAC|CHORISMATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 WGHGHG 8
WG HG
Sbjct: 15 WGESHG 20




141|Sequence|701|710|GHGPGEDCAG

>sp|Y3004_HALS3|UPF0179 protein OE_3004R|Halobacterium salinarum (strain ATCC 29341

Query: 2 HGPGEDCAG 10
HGP +DC G
Sbjct: 20 HGPADDCEG 28


>sp|Y1401_HALSA|UPF0179 protein VNG_1401C|Halobacterium salinarum (strain ATCC 700922

Query: 2 HGPGEDCAG 10
HGP +DC G
Sbjct: 20 HGPADDCEG 28


>sp|MTAB_METBF|METHANOL--CORRINOID protein co-methyltransferase|Methanosarcina barkeri (strain Fusaro

Query: 3 GPGEDCA 9
GPG+DC
Sbjct: 264 GPGKDCG 270


>sp|MVK_METTH|MEVALONATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 HGPGEDCA 9
HGPGE A
Sbjct: 117 HGPGETAA 124


>sp|MCRAM_METAC|[METHYL coenzyme M reductase]-L-arginine

Query: 1 GHGPGEDCAG 10
G PG DC G
Sbjct: 8 GGNPGVDCKG 17


>sp|SODF_METTH|SUPEROXIDE dismutase [Fe]|Methanothermobacter thermautotrophicus (strain

Query: 3 GPGEDCAG 10
GP ++C G
Sbjct: 89 GPADECGG 96


>sp|SODF_METTM|SUPEROXIDE dismutase [Fe]|Methanothermobacter marburgensis (strain ATCC

Query: 3 GPGEDCAG 10
GP ++C G
Sbjct: 86 GPADECGG 93


>sp|Y636_PYRAB|UPF0179 protein PYRAB06360|Pyrococcus abyssi (strain GE5 /

Query: 2 HGPGEDC 8
+GPGE C
Sbjct: 20 YGPGEPC 26


>sp|MTD_METST|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaera

Query: 1 GHGPGEDCAG 10
G GPGE G
Sbjct: 93 GDGPGERAIG 102


>sp|ALF1_AERPE|PROBABLE fructose-bisphosphate aldolase class 1|Aeropyrum pernix (strain

Query: 2 HGPGE 6
HGPGE
Sbjct: 33 HGPGE 37


>sp|Y1477_PYRHO|UPF0179 protein PH1477|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HGPGEDC 8
+GPGE C
Sbjct: 20 YGPGEPC 26


>sp|PURL_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GPGED 7
GPGED
Sbjct: 55 GPGED 59


>sp|PURL_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus abyssi (strain GE5 /

Query: 3 GPGED 7
GPGED
Sbjct: 55 GPGED 59


>sp|TRM56_HALMA|TRNA (cytidine(56)-2'-O)-methyltransferase|Haloarcula marismortui

Query: 1 GHGPGED 7
GH PG D
Sbjct: 13 GHRPGRD 19


>sp|LEUC_PICTO|3-ISOPROPYLMALATE dehydratase large subunit|Picrophilus torridus (strain ATCC 700027

Query: 3 GPGEDC 8
GPGE C
Sbjct: 365 GPGETC 370


>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 3 GPGED 7
GPGED
Sbjct: 55 GPGED 59


>sp|Y1427_METMP|UPF0210 protein MMP1427|Methanococcus maripaludis (strain DSM 14266

Query: 2 HGPGE 6
HGPGE
Sbjct: 211 HGPGE 215


>sp|PURL_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GPGED 7
GPGED
Sbjct: 55 GPGED 59


>sp|TRM56_STAMF|TRNA (cytidine(56)-2'-O)-methyltransferase|Staphylothermus marinus

Query: 1 GHGPGED 7
GH PG D
Sbjct: 9 GHRPGRD 15


>sp|Y738_METVS|UPF0210 protein Mevan_0738|Methanococcus vannielii (strain ATCC 35089

Query: 2 HGPGE 6
HGPGE
Sbjct: 211 HGPGE 215


>sp|Y672_METM7|UPF0210 protein MmarC7_0672|Methanococcus maripaludis (strain C7 /

Query: 2 HGPGE 6
HGPGE
Sbjct: 211 HGPGE 215


>sp|Y151_METM5|UPF0210 protein MmarC5_0151|Methanococcus maripaludis (strain C5 /

Query: 2 HGPGE 6
HGPGE
Sbjct: 211 HGPGE 215


>sp|Y1246_METM6|UPF0210 protein MmarC6_1246|Methanococcus maripaludis (strain C6 /

Query: 2 HGPGE 6
HGPGE
Sbjct: 211 HGPGE 215


>sp|PURL_HALSA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 700922

Query: 4 PGEDCAG 10
PGED AG
Sbjct: 416 PGEDAAG 422


>sp|PURL_HALS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 29341

Query: 4 PGEDCAG 10
PGED AG
Sbjct: 416 PGEDAAG 422


>sp|TRM56_HALWD|TRNA (cytidine(56)-2'-O)-methyltransferase|Haloquadratum walsbyi

Query: 1 GHGPGED 7
GH PG D
Sbjct: 15 GHRPGRD 21


>sp|NIFH_METHJ|NITROGENASE iron protein|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GHGPGEDCAG 10
G PG CAG
Sbjct: 88 GPEPGVGCAG 97


>sp|TRM56_NATPD|TRNA (cytidine(56)-2'-O)-methyltransferase|Natronomonas pharaonis

Query: 1 GHGPGED 7
GH PG D
Sbjct: 13 GHRPGRD 19




142|Sequence|706|715|EDCAGLIYAG

>sp|MPTN_METMP|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EDCAGLIYAG 10
+D GL+YAG
Sbjct: 236 KDAVGLVYAG 245


>sp|PDXT_PYRCJ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum calidifontis

Query: 3 CAGLIY 8
CAGLIY
Sbjct: 81 CAGLIY 86


>sp|PDXT_METST|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosphaera stadtmanae

Query: 1 EDCAGLIYAG 10
+DC GLI +G
Sbjct: 43 KDCNGLIISG 52


>sp|CBIA_ARCFU|COBYRINATE a,c-diamide synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DCAGLIYAG 10
+C GL+Y G
Sbjct: 334 ECGGLMYLG 342


>sp|Y1345_METJA|TPR repeat-containing protein MJ1345|Methanocaldococcus jannaschii

Query: 1 EDCAGLIYAG 10
+DC L+Y G
Sbjct: 179 KDCQSLLYKG 188


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DCAGLIY 8
DC GLI+
Sbjct: 241 DCKGLIF 247


>sp|TIAS_CENSY|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Cenarchaeum symbiosum (strain

Query: 3 CAGLIYAG 10
C+GL Y G
Sbjct: 138 CSGLFYTG 145


>sp|PYLD_METBF|PYRROLYSINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EDCAGLIYA 9
+ C G+IYA
Sbjct: 126 QPCTGIIYA 134


>sp|PYLD_METAC|PYRROLYSINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EDCAGLIYA 9
+ C G+IYA
Sbjct: 122 QPCTGIIYA 130


>sp|EF2_METPE|ELONGATION factor 2|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 AGLIYAG 10
AG++YAG
Sbjct: 613 AGILYAG 619


>sp|Y1676_METJA|UNCHARACTERIZED protein MJ1676|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 AGLIYAG 10
AGLIY G
Sbjct: 184 AGLIYGG 190


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 EDCAGLIYA 9
+DC G++ A
Sbjct: 399 KDCGGIVLA 407


>sp|Y237_THEAC|MEMO1 family protein Ta0237|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 AGLIYAG 10
AG+IY+G
Sbjct: 45 AGIIYSG 51


>sp|Y3507_METJA|UNCHARACTERIZED protein MJECL07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDCAGLIYA 9
E C+G++Y
Sbjct: 61 EFCSGIVYG 69


>sp|PDXT_HALWD|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Haloquadratum walsbyi (strain

Query: 3 CAGLIYAG 10
CAGLI A
Sbjct: 85 CAGLIIAA 92


>sp|GMSS_HALSA|GLUTAMATE mutase sigma subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 EDCAGL 6
+DCAGL
Sbjct: 71 QDCAGL 76


>sp|HMGCS_METKA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 EDCAGLIYAG 10
+ CAGL+ +G
Sbjct: 125 QTCAGLVASG 134


>sp|MAAL_HALMA|METHYLASPARTATE ammonia-lyase|Haloarcula marismortui (strain ATCC 43049

Query: 2 DCAGLIYAG 10
DCA + Y+G
Sbjct: 68 DCAAVQYSG 76




143|Sequence|711|720|LIYAGQWNDF

>sp|SYFA_METM7|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C7 /

Query: 1 LIYAGQWNDF 10
+I +G+WND+
Sbjct: 205 MIVSGKWNDY 214


>sp|SYFA_METM5|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C5 /

Query: 1 LIYAGQWNDF 10
+I +G+WND+
Sbjct: 205 MIVSGKWNDY 214


>sp|ASSY_METTH|ARGININOSUCCINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LIYAGQWND 9
L+Y+G W+D
Sbjct: 310 LVYSGLWHD 318


>sp|ASSY_METST|ARGININOSUCCINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LIYAGQWND 9
L+Y G WN+
Sbjct: 305 LVYNGLWNE 313


>sp|IF6_PICTO|TRANSLATION initiation factor 6|Picrophilus torridus (strain ATCC 700027

Query: 2 IYAGQWND 9
+YA WND
Sbjct: 15 VYARTWND 22


>sp|Y1239_METJA|UNCHARACTERIZED protein MJ1239|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YAGQWNDF 10
Y G W DF
Sbjct: 178 YRGNWRDF 185


>sp|UVRB_METTH|UVRABC system protein B|Methanothermobacter thermautotrophicus (strain

Query: 1 LIYAGQWND 9
LIYAG++ D
Sbjct: 548 LIYAGRFTD 556


>sp|PURA_METVS|ADENYLOSUCCINATE synthetase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LIYAGQWND 9
+I GQW D
Sbjct: 5 IIVGGQWGD 13


>sp|PURA_METJA|ADENYLOSUCCINATE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LIYAGQWND 9
+I GQW D
Sbjct: 11 IIVGGQWGD 19


>sp|ACYP_PYRCJ|ACYLPHOSPHATASE calidifontis (strain DSM 21063

Query: 3 YAGQWNDF 10
Y G++NDF
Sbjct: 97 YKGEFNDF 104


>sp|KAE1B_METTH|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 IYAGQW 7
IY GQW
Sbjct: 348 IYRGQW 353


>sp|Y560_METJA|UNCHARACTERIZED protein MJ0560|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LIYAGQWNDF 10
++YAG W+ F
Sbjct: 94 IVYAGAWSYF 103


>sp|VPB15_ARCFU|PUTATIVE antitoxin VapB15|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LIYAGQWND 9
L +AG+W D
Sbjct: 41 LEFAGKWKD 49


>sp|ASSY_METJA|ARGININOSUCCINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LIYAGQWND 9
LIY G W D
Sbjct: 307 LIYKGLWFD 315


>sp|PURA_THESM|ADENYLOSUCCINATE synthetase|Thermococcus sibiricus (strain DSM 12597

Query: 1 LIYAGQWND 9
++ GQW D
Sbjct: 5 IVVGGQWGD 13


>sp|PURA_THEON|ADENYLOSUCCINATE synthetase|Thermococcus onnurineus (strain NA1)

Query: 1 LIYAGQWND 9
++ GQW D
Sbjct: 5 IVVGGQWGD 13


>sp|PURA_THEKO|ADENYLOSUCCINATE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LIYAGQWND 9
++ GQW D
Sbjct: 5 IVVGGQWGD 13


>sp|PURA_THEGJ|ADENYLOSUCCINATE synthetase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LIYAGQWND 9
++ GQW D
Sbjct: 5 IVVGGQWGD 13


>sp|PURA_PYRSS|ADENYLOSUCCINATE synthetase|Pyrococcus sp. (strain ST700)

Query: 1 LIYAGQWND 9
++ GQW D
Sbjct: 5 IVVGGQWGD 13


>sp|PURA_PYRHO|ADENYLOSUCCINATE synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LIYAGQWND 9
++ GQW D
Sbjct: 5 IVVGGQWGD 13


>sp|PURA_PYRFU|ADENYLOSUCCINATE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LIYAGQWND 9
++ GQW D
Sbjct: 5 IVVGGQWGD 13


>sp|PURA_PYRAB|ADENYLOSUCCINATE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 LIYAGQWND 9
++ GQW D
Sbjct: 5 IVVGGQWGD 13


>sp|PURA_METMP|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LIYAGQWND 9
++ GQW D
Sbjct: 5 IVVGGQWGD 13


>sp|PURA_METM7|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C7 /

Query: 1 LIYAGQWND 9
++ GQW D
Sbjct: 5 IVVGGQWGD 13


>sp|PURA_METM6|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C6 /

Query: 1 LIYAGQWND 9
++ GQW D
Sbjct: 5 IVVGGQWGD 13


>sp|PURA_METM5|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C5 /

Query: 1 LIYAGQWND 9
++ GQW D
Sbjct: 5 IVVGGQWGD 13


>sp|PURA_META3|ADENYLOSUCCINATE synthetase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LIYAGQWND 9
++ GQW D
Sbjct: 5 IVVGGQWGD 13


>sp|IF6_THEVO|TRANSLATION initiation factor 6|Thermoplasma volcanium (strain ATCC 51530

Query: 2 IYAGQWND 9
IYA W+D
Sbjct: 17 IYAKAWDD 24


>sp|IF6_THEAC|TRANSLATION initiation factor 6|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IYAGQWND 9
IYA W+D
Sbjct: 15 IYAKAWDD 22


>sp|ASSY_METVA|ARGININOSUCCINATE synthase|Methanococcus vannielii

Query: 1 LIYAGQWND 9
LIY G W++
Sbjct: 310 LIYKGLWHE 318


>sp|PRIS_THEKO|DNA primase small subunit PriS|Thermococcus kodakarensis (strain ATCC

Query: 1 LIYAGQWN 8
L Y+G+W+
Sbjct: 15 LYYSGEWD 22


>sp|OFOB_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Sulfolobus sp

Query: 3 YAGQWNDF 10
+ QWND+
Sbjct: 4 FTPQWNDW 11


>sp|PURA_METST|ADENYLOSUCCINATE synthetase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LIYAGQWND 9
++ GQW D
Sbjct: 5 ILVGGQWGD 13


>sp|ASSY_THEAC|ARGININOSUCCINATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LIYAGQWND 9
+Y G W+D
Sbjct: 303 FVYGGLWHD 311


>sp|ASSY_METMP|ARGININOSUCCINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LIYAGQWND 9
L+Y G W++
Sbjct: 310 LVYKGLWHE 318


>sp|GATA_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Haloarcula marismortui (strain ATCC

Query: 3 YAGQWND 9
Y G WN+
Sbjct: 286 YDGNWNE 292


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 2 IYAGQWNDF 10
+Y+G+W F
Sbjct: 388 MYSGEWEVF 396


>sp|ASSY_IGNH4|ARGININOSUCCINATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LIYAGQWND 9
L+Y G W D
Sbjct: 307 LVYDGLWFD 315


>sp|TRM14_METJA|TRNA (guanine(6)-N2)-methyltransferase|Methanocaldococcus jannaschii

Query: 1 LIYAGQWND 9
L+Y W D
Sbjct: 185 LVYLSDWKD 193


>sp|Y365_SACI3|PUTATIVE antitoxin M1627_0365|Saccharolobus islandicus (strain M.16.27)

Query: 3 YAGQWND 9
YAG W+D
Sbjct: 43 YAGIWSD 49




144|Sequence|716|725|QWNDFQCEDV

>sp|TIAS_METJA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocaldococcus jannaschii

Query: 1 QWNDFQCED 9
++ DF+CE+
Sbjct: 85 KYTDFECEN 93


>sp|WTPC_PYRFU|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus furiosus (strain ATCC

Query: 1 QWNDFQCEDV 10
+W DF +D+
Sbjct: 10 KWKDFHLKDI 19


>sp|RIBL_PYRHO|FAD synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 DFQCEDV 10
DF CED+
Sbjct: 102 DFDCEDL 108


>sp|IF1A_PYRFU|TRANSLATION initiation factor 1A|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WNDFQCED 9
W D +CED
Sbjct: 38 WMDVRCED 45


>sp|Y303_ARCFU|UNCHARACTERIZED protein AF_0303|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QWNDFQCE 8
+WNDF+ +
Sbjct: 353 KWNDFEVD 360


>sp|IF1A_PYRHO|TRANSLATION initiation factor 1A|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 WNDFQCED 9
W D +CED
Sbjct: 38 WMDVRCED 45


>sp|IF1A_PYRAB|TRANSLATION initiation factor 1A|Pyrococcus abyssi (strain GE5 /

Query: 2 WNDFQCED 9
W D +CED
Sbjct: 36 WMDVRCED 43


>sp|IF1A_THEKO|TRANSLATION initiation factor 1A|Thermococcus kodakarensis (strain ATCC

Query: 2 WNDFQCED 9
W D +CED
Sbjct: 41 WMDVRCED 48


>sp|PORA_METTM|PYRUVATE synthase subunit PorA|Methanothermobacter marburgensis (strain ATCC

Query: 4 DFQCED 9
D++CED
Sbjct: 254 DYRCED 259


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 WNDFQCED 9
W D+ C D
Sbjct: 273 WKDYWCGD 280


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 WNDFQCED 9
W +F C D
Sbjct: 273 WREFWCGD 280




145|Sequence|721|730|QCEDVNNFIC

>sp|PYLS_METBF|PYRROLYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 EDVNNFI 9
ED+NNF+
Sbjct: 77 EDINNFL 83


>sp|PYLS_METBA|PYRROLYSINE--TRNA ligase|Methanosarcina barkeri

Query: 3 EDVNNFI 9
ED+NNF+
Sbjct: 77 EDINNFL 83


>sp|PYLS_METAC|PYRROLYSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 EDVNNFI 9
ED+NNF+
Sbjct: 77 EDINNFL 83


>sp|Y886_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0886|Methanocaldococcus

Query: 3 EDVNNFI 9
EDV NFI
Sbjct: 591 EDVQNFI 597


>sp|TIAS_IGNAA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignisphaera aggregans (strain

Query: 1 QCEDVNNFI 9
+C D+NN +
Sbjct: 73 ECTDLNNLL 81


>sp|SYFB_METAR|PHENYLALANINE--TRNA ligase beta subunit|Methanocella arvoryzae (strain DSM 22066

Query: 2 CEDVNNFI 9
C+D NFI
Sbjct: 379 CQDTFNFI 386


>sp|RS17_METMJ|SMALL ribosomal subunit protein uS17|Methanoculleus marisnigri (strain

Query: 1 QCEDVN 6
+CEDVN
Sbjct: 15 ECEDVN 20


>sp|Y245_SULTO|UPF0210 protein STK_02450|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 EDVNNFI 9
E++NNF+
Sbjct: 47 EEINNFL 53


>sp|MTRA_METFA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanocaldococcus fervens (strain

Query: 2 CEDVN 6
CEDVN
Sbjct: 139 CEDVN 143


>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 3 EDVNNFI 9
ED+ NFI
Sbjct: 58 EDIRNFI 64


>sp|KCY_META3|CYTIDYLATE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 QCEDVN 6
+CED+N
Sbjct: 115 ECEDIN 120




146|Sequence|726|735|NNFICEKDRE

>sp|PURA_META3|ADENYLOSUCCINATE synthetase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 NFICEKDR 9
++ICEKD+
Sbjct: 21 SYICEKDK 28


>sp|ATGT_METAC|TRNA-GUANINE(15) transglycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 FICEKDRE 10
FICEK+ E
Sbjct: 461 FICEKEFE 468


>sp|PURL_HALSA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 700922

Query: 2 NFICEKDRE 10
N++CE D E
Sbjct: 337 NYVCEFDGE 345


>sp|PURL_HALS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 29341

Query: 2 NFICEKDRE 10
N++CE D E
Sbjct: 337 NYVCEFDGE 345


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 NNFICE 6
N+FICE
Sbjct: 246 NSFICE 251


>sp|PURA_METJA|ADENYLOSUCCINATE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NFICEKDR 9
++IC+KD+
Sbjct: 27 SYICDKDK 34


>sp|ATGT_METMA|TRNA-GUANINE(15) transglycosylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 FICEKD 8
FICEK+
Sbjct: 461 FICEKE 466


>sp|GLPK_HALSA|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 NNFICE 6
NNF+C+
Sbjct: 425 NNFLCQ 430


>sp|GLPK_HALS3|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 NNFICE 6
NNF+C+
Sbjct: 425 NNFLCQ 430


>sp|GLPK_HALMA|GLYCEROL kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 NNFICE 6
NNF+C+
Sbjct: 425 NNFLCQ 430


>sp|GLPK_HALWD|GLYCEROL kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 NNFICE 6
NNF+C+
Sbjct: 425 NNFLCQ 430


>sp|GLCD2_CALMQ|GLUCOSE 1-dehydrogenase 2|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 NFICEKDRE 10
N IC DRE
Sbjct: 36 NGICGSDRE 44


>sp|HIS1_META3|ATP phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 2 NFICEKDRE 10
+ ICE+D E
Sbjct: 70 DLICERDTE 78


>sp|GLPK_HALVD|GLYCEROL kinase|Haloferax volcanii (strain ATCC 29605

Query: 1 NNFICE 6
NNF+C+
Sbjct: 426 NNFLCQ 431




147|Sequence|731|742|EKDRETVLSSAL

>sp|AATE_HALVD|A-TYPE ATP synthase subunit E|Haloferax volcanii (strain ATCC 29605

Query: 1 EKDRETVLSSA 11
E++RE LSSA
Sbjct: 56 EREREQALSSA 66


>sp|TRPB1_METMA|TRYPTOPHAN synthase beta chain 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EKDRETVLS 9
+KD ETVLS
Sbjct: 390 DKDLETVLS 398


>sp|TRPB1_METAC|TRYPTOPHAN synthase beta chain 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EKDRETVLS 9
+KD ETVLS
Sbjct: 390 DKDLETVLS 398


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 EKDRETVLSS 10
E D ET+LS+
Sbjct: 555 EHDEETILSA 564


>sp|KDGK_SACS2|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE solfataricus (strain ATCC 35092

Query: 1 EKDRETVLS 9
EK +ET+LS
Sbjct: 174 EKAKETILS 182






THE END