1|Sequence|1|10|MGTVLSLSPS
>sp|POLG_WMV2U|GENOME polyprotein|Watermelon mosaic virus II (isolate
Query: 1 MGTVLSLSP 9
+G VLSLSP
Sbjct: 11 LGMVLSLSP 19
>sp|Y002_SIFVH|UNCHARACTERIZED protein 2|Sulfolobus islandicus filamentous virus (isolate
Query: 2 GTVLSLSPS 10
GTVL L+PS
Sbjct: 52 GTVLILTPS 60
>sp|THA_BPCA1|TAIL hub protein A|Bacteroides phage crAss001 (Bacteroides phage
Query: 1 MGTVLSLSP 9
+GTV++L P
Sbjct: 139 LGTVINLQP 147
2|Sequence|6|15|SLSPSYRKAT
***** No hits found ******
3|Sequence|11|20|YRKATLFEDG
>sp|DNBI_ALHV1|MAJOR DNA-binding protein|Alcelaphine herpesvirus 1 (strain C500)
Query: 5 TLFEDG 10
TLFEDG
Sbjct: 381 TLFEDG 386
>sp|POL_AVIRE|GAG-POL polyprotein|Avian reticuloendotheliosis virus
Query: 3 KATLFEDG 10
+ATLF DG
Sbjct: 598 EATLFTDG 605
4|Sequence|16|25|LFEDGAATVG
>sp|LTP_MUHVK|LARGE tegument protein deneddylase|Murid herpesvirus 1 (strain K181)
Query: 1 LFEDGAAT 8
LFE+G+AT
Sbjct: 437 LFEEGSAT 444
>sp|POL_BLVAU|GAG-PRO-POL polyprotein|Bovine leukemia virus (isolate Australian)
Query: 1 LFEDGAATVG 10
LF DGAA G
Sbjct: 1002 LFSDGAARRG 1011
>sp|POL_WDSV|GAG-POL polyprotein|Walleye dermal sarcoma virus (WDSV)
Query: 1 LFEDGAATVG 10
LF DG+ T G
Sbjct: 1228 LFSDGSYTTG 1237
>sp|SPIKE_ADEB3|FIBER protein|Bovine adenovirus B serotype 3
Query: 2 FEDGAATVG 10
FE+GA T G
Sbjct: 556 FENGAVTAG 564
5|Sequence|21|30|AATVGHYTAV
>sp|LEF11_NPVR1|LATE expression factor 11|Rachiplusia ou multiple nucleopolyhedrovirus
Query: 2 ATVGHYTAV 10
A +GHYT +
Sbjct: 61 ANLGHYTVI 69
>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 1 AATVGHYTAV 10
+VGHYT V
Sbjct: 1867 GGSVGHYTHV 1876
>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)
Query: 1 AATVGHYTAV 10
+VGHYT V
Sbjct: 1868 GGSVGHYTHV 1877
>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 1 AATVGHYTAV 10
+VGHYT V
Sbjct: 1867 GGSVGHYTHV 1876
>sp|VP4_ROT18|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 ATVGHYT 8
AT GHYT
Sbjct: 184 ATPGHYT 190
>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)
Query: 1 AATVGHYTAV 10
+VGHYT V
Sbjct: 1868 GGSVGHYTHV 1877
>sp|IAP4_NPVOP|PUTATIVE apoptosis inhibitor 4|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 1 AATVGHYT 8
AA GHYT
Sbjct: 98 AAPCGHYT 105
>sp|RDRP_P1AMV|RNA replication protein|Plantago asiatica mosaic potexvirus (P1AMV)
Query: 3 TVGHYTA 9
TVGH TA
Sbjct: 225 TVGHLTA 231
6|Sequence|26|35|HYTAVQNSKN
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 1 HYTAVQNSK 9
HY AVQ+ K
Sbjct: 73 HYAAVQDLK 81
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 1 HYTAVQNSK 9
HY AVQ+ K
Sbjct: 75 HYAAVQDLK 83
>sp|VE1_PCPVC|REPLICATION protein E1|Pygmy chimpanzee papillomavirus type 1C
Query: 1 HYTAVQNSK 9
HY AVQ+ K
Sbjct: 75 HYAAVQDLK 83
7|Sequence|31|40|QNSKNAKDKN
***** No hits found ******
8|Sequence|36|45|AKDKNLKRHS
>sp|SIGNS_REOVJ|PROTEIN sigma-NS|Reovirus type 2 (strain D5/Jones)
Query: 2 KDKNLK 7
KDKNLK
Sbjct: 311 KDKNLK 316
>sp|SIGNS_REOVL|PROTEIN sigma-NS|Reovirus type 1 (strain Lang)
Query: 2 KDKNLK 7
KDKNLK
Sbjct: 311 KDKNLK 316
>sp|SIGNS_REOVD|PROTEIN sigma-NS|Reovirus type 3 (strain Dearing)
Query: 2 KDKNLK 7
KDKNLK
Sbjct: 311 KDKNLK 316
9|Sequence|41|50|LKRHSIISVL
>sp|RIR2_PSHV1|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Psittacid herpesvirus 1 (isolate Amazon
Query: 1 LKRHSIISV 9
L+RHSI V
Sbjct: 177 LRRHSIFQV 185
10|Sequence|46|55|IISVLPWKRI
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 IISVLPWKR 9
+I +LPWK+
Sbjct: 132 VIQLLPWKQ 140
>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 VLPWKRI 10
+LPWK+I
Sbjct: 138 LLPWKKI 144
>sp|CAPS4_NORAV|ORF4 polyprotein|Nora virus
Query: 4 VLPWKR 9
VLPW+R
Sbjct: 358 VLPWRR 363
>sp|POLG_ZYMVS|GENOME polyprotein|Zucchini yellow mosaic virus (strain
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2702 IVSILEWDR 2710
>sp|POLG_ZYMVR|GENOME polyprotein|Zucchini yellow mosaic virus (strain
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2702 IVSILEWDR 2710
>sp|POLG_ZYMVC|GENOME polyprotein|Zucchini yellow mosaic virus (strain
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2699 IVSILEWDR 2707
>sp|POLG_WMV2U|GENOME polyprotein|Watermelon mosaic virus II (isolate
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 634 IVSILEWDR 642
>sp|POLG_WMV2T|GENOME polyprotein|Watermelon mosaic virus II (isolate
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 72 IVSILEWDR 80
>sp|POLG_TVMV|GENOME polyprotein|Tobacco vein mottling virus (TVMV)
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2657 IVSILEWDR 2665
>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2773 IVSILEWDR 2781
>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2774 IVSILEWDR 2782
>sp|POLG_TEV|GENOME polyprotein|Tobacco etch virus (TEV)
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2690 IVSILEWDR 2698
>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2699 IVSILEWDR 2707
>sp|POLG_SBMVG|GENOME polyprotein|Soybean mosaic virus (strain G2)
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2699 IVSILEWDR 2707
>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2689 IVSILEWDR 2697
>sp|POLG_PPVSK|GENOME polyprotein|Plum pox potyvirus (strain SK
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2707 IVSILEWDR 2715
>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2707 IVSILEWDR 2715
>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2707 IVSILEWDR 2715
>sp|POLG_PPVEA|GENOME polyprotein|Plum pox potyvirus (strain El
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 1083 IVSILEWDR 1091
>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2708 IVSILEWDR 2716
>sp|POLG_PEMVM|GENOME polyprotein|Peanut mottle virus (strain M)
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2718 IVSILEWDR 2726
>sp|POLG_LMVE|GENOME polyprotein|Lettuce mosaic virus (strain E)
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2872 IVSILEWDR 2880
>sp|POLG_LMV0|GENOME polyprotein|Lettuce mosaic virus (strain 0
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2872 IVSILEWDR 2880
>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2679 IVSILEWDR 2687
>sp|POLG_BTMV|GENOME polyprotein|Beet mosaic virus (BtMV)
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2708 IVSILEWDR 2716
>sp|POLG_BCMNN|GENOME polyprotein|Bean common mosaic necrosis virus
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2703 IVSILEWDR 2711
>sp|POLG_PVYN|GENOME polyprotein|Potato virus Y (strain N)
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2692 IVSILQWDR 2700
>sp|POLG_PVYHU|GENOME polyprotein|Potato virus Y (strain Hungarian)
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2690 IVSILQWDR 2698
>sp|POLG_PEMVC|GENOME polyprotein|Pepper mottle virus (isolate California)
Query: 1 IISVLPWKR 9
I+S+L W R
Sbjct: 2691 IVSILQWDR 2699
>sp|RNL1_NPVAC|PUTATIVE bifunctional polynucleotide kinase/RNA ligase|Autographa
Query: 1 IISVLPWK 8
++ LPWK
Sbjct: 330 LVQTLPWK 337
>sp|POLG_OMV|GENOME polyprotein|Ornithogalum mosaic virus
Query: 1 IISVLPWKR 9
++S+L W R
Sbjct: 781 VVSILEWDR 789
>sp|POLG_CYVV|GENOME polyprotein|Clover yellow vein virus
Query: 1 IISVLPWKR 9
++S+L W R
Sbjct: 16 VVSILEWDR 24
>sp|POLG_TRMVU|GENOME polyprotein|Triticum mosaic virus (isolate Triticum
Query: 1 IISVLPWKR 9
I+SVL W +
Sbjct: 2737 IVSVLQWNK 2745
>sp|RDRP_BTV10|RNA-DIRECTED RNA polymerase|Bluetongue virus 10 (isolate USA)
Query: 3 SVLPWKRI 10
S+LPW +
Sbjct: 101 SILPWSEL 108
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 ISVLPWK 8
+++LPWK
Sbjct: 619 LNMLPWK 625
>sp|F13_FOWPN|ENVELOPE protein F13 homolog|Fowlpox virus (strain NVSL) (FPV)
Query: 1 IISVLPWKR 9
I+S+LP KR
Sbjct: 231 IVSLLPTKR 239
>sp|002R_IIV3|UNCHARACTERIZED protein 002R|Invertebrate iridescent virus 3 (IIV-3)
Query: 3 SVLPWK 8
S++PWK
Sbjct: 41 SIVPWK 46
11|Sequence|51|60|PWKRIVAVSA
>sp|Y030_NPVAC|UNCHARACTERIZED 54.7 kDa protein in|Autographa californica nuclear polyhedrosis
Query: 2 WKRIVA 7
WKRIVA
Sbjct: 134 WKRIVA 139
>sp|Y082_OSHVF|UNCHARACTERIZED protein ORF82|Ostreid herpesvirus 1 (isolate France)
Query: 2 WKRIVA 7
WKR+VA
Sbjct: 164 WKRLVA 169
12|Sequence|56|65|VAVSAKKKNS
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 VSAKKKNS 10
+SAKKKN+
Sbjct: 398 LSAKKKNT 405
13|Sequence|61|70|KKKNSKKVQP
>sp|YR379_MIMIV|UNCHARACTERIZED protein R379|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 KKKNSKKVQ 9
K KN+KKVQ
Sbjct: 143 KIKNTKKVQ 151
>sp|P4B_FOWPN|MAJOR core protein 4b|Fowlpox virus (strain NVSL) (FPV)
Query: 4 NSKKVQP 10
NSKKV+P
Sbjct: 271 NSKKVKP 277
14|Sequence|66|75|KKVQPNSSYQ
>sp|Y024_OSHVF|UNCHARACTERIZED protein ORF24|Ostreid herpesvirus 1 (isolate France)
Query: 1 KKVQPNSSY 9
K +QPN SY
Sbjct: 5 KNLQPNKSY 13
>sp|LTP_SHV21|LARGE tegument protein deneddylase|Saimiriine herpesvirus 2 (strain 11)
Query: 2 KVQPNSSYQ 10
KVQPN+ Q
Sbjct: 2217 KVQPNTCIQ 2225
15|Sequence|71|80|NSSYQNNITH
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 SSYQNNITH 10
S +NNITH
Sbjct: 2722 SGARNNITH 2730
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 NSSYQNNITH 10
NS +NNIT+
Sbjct: 579 NSMAKNNITY 588
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 NSSYQNNITH 10
NS +NNIT+
Sbjct: 579 NSMAKNNITY 588
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 NSSYQNNITH 10
NS +NNIT+
Sbjct: 579 NSMAKNNITY 588
>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)
Query: 2 SSYQNNITH 10
S +NN+TH
Sbjct: 2721 SGVKNNLTH 2729
16|Sequence|76|85|NNITHLNNEN
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 NNITHLNN 8
NNITH+ N
Sbjct: 2726 NNITHMVN 2733
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 1 NNITHLNNE 9
NN+T L NE
Sbjct: 939 NNVTILQNE 947
>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain
Query: 1 NNITHLNNE 9
N ITH +NE
Sbjct: 1075 NLITHTDNE 1083
>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)
Query: 1 NNITHLNN 8
NNI HL N
Sbjct: 2132 NNICHLTN 2139
>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)
Query: 1 NNITHLNN 8
NNI HL N
Sbjct: 2131 NNICHLTN 2138
17|Sequence|81|90|LNNENLKKSL
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 4 ENLKKSL 10
ENLKKSL
Sbjct: 604 ENLKKSL 610
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 4 ENLKKSL 10
ENLKKSL
Sbjct: 603 ENLKKSL 609
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 4 ENLKKSL 10
ENLKKSL
Sbjct: 609 ENLKKSL 615
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 4 ENLKKSL 10
ENLKKSL
Sbjct: 603 ENLKKSL 609
>sp|NCAP_IBVM|NUCLEOPROTEIN infectious bronchitis virus (strain
Query: 2 NNENLKKS 9
+NENLK S
Sbjct: 58 DNENLKSS 65
>sp|YVAH_VACCC|UNCHARACTERIZED 14.5 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 NENLKKS 9
NENLKKS
Sbjct: 58 NENLKKS 64
>sp|PG030_VACCW|PROTEIN OPG030|Vaccinia virus (strain Western Reserve)
Query: 1 LNNENLK 7
LNNENLK
Sbjct: 54 LNNENLK 60
>sp|PG030_VACCC|PROTEIN OPG030|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LNNENLK 7
LNNENLK
Sbjct: 54 LNNENLK 60
18|Sequence|86|95|LKKSLSCANL
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 1 LKKSLSCA 8
L+KSLSC+
Sbjct: 554 LRKSLSCS 561
>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 KKSLSCAN 9
+KSLSC N
Sbjct: 129 EKSLSCCN 136
>sp|YR131_MIMIV|UNCHARACTERIZED protein R131|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 SLSCANL 10
S+SCANL
Sbjct: 5 SISCANL 11
>sp|PTELO_BPPY5|PROTELOMERASE phage PY54 (Bacteriophage PY54)
Query: 1 LKKSLSCAN 9
+KK+L+C N
Sbjct: 484 IKKNLNCRN 492
19|Sequence|91|100|SCANLSTFAQ
>sp|POLG_MRFVC|GENOME polyprotein|Maize rayado fino virus (isolate
Query: 2 CANLSTFAQ 10
C NL+ FAQ
Sbjct: 1398 CINLNEFAQ 1406
>sp|POLG_ASGVK|GENOME polyprotein|Apple stem grooving virus (strain
Query: 1 SCANLST 7
SC+NLST
Sbjct: 566 SCSNLST 572
>sp|CAPSP_ADEG1|PENTON protein|Fowl adenovirus A serotype 1
Query: 1 SCANLSTFAQ 10
+C N+S+F Q
Sbjct: 137 NCPNISSFFQ 146
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 SCANLSTFAQ 10
SC L+ FAQ
Sbjct: 458 SCRRLTDFAQ 467
>sp|TRM3_ALHV1|TRIPARTITE terminase subunit 3|Alcelaphine herpesvirus 1 (strain C500)
Query: 1 SCANLSTF 8
SC LSTF
Sbjct: 431 SCGTLSTF 438
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SCANLSTFAQ 10
SC+++ FAQ
Sbjct: 458 SCSSIDKFAQ 467
20|Sequence|96|105|STFAQPPPAQ
>sp|VP91_NPVEP|CAPSID-ASSOCIATED protein Vp91|Epiphyas postvittana nucleopolyhedrovirus (EppoMNPV)
Query: 2 TFAQPPP 8
TF +PPP
Sbjct: 590 TFVKPPP 596
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 TFAQPPPA 9
+F QPPP+
Sbjct: 2351 SFGQPPPS 2358
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 4 AQPPPA 9
+QPPPA
Sbjct: 223 SQPPPA 228
21|Sequence|101|110|PPPAQPPAPP
>sp|VPHE_NPVLD|POLYHEDRAL envelope protein|Lymantria dispar multicapsid nuclear polyhedrosis
Query: 4 AQPPAP 9
AQPPAP
Sbjct: 112 AQPPAP 117
>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)
Query: 1 PPPAQPPAP 9
PPP PAP
Sbjct: 2840 PPPVIQPAP 2848
>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)
Query: 1 PPPAQPPAP 9
PPP PAP
Sbjct: 2825 PPPVIQPAP 2833
>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)
Query: 1 PPPAQPPAP 9
PPP PAP
Sbjct: 2841 PPPVIQPAP 2849
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5703 PAQLPAP 5709
>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5272 PAQLPAP 5278
>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5270 PAQLPAP 5276
>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5270 PAQLPAP 5276
>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5789 PAQLPAP 5795
>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5783 PAQLPAP 5789
>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5731 PAQLPAP 5737
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5698 PAQLPAP 5704
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5736 PAQLPAP 5742
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5756 PAQLPAP 5762
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5786 PAQLPAP 5792
>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5698 PAQLPAP 5704
>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5698 PAQLPAP 5704
>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5698 PAQLPAP 5704
>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5698 PAQLPAP 5704
>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5803 PAQLPAP 5809
>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5756 PAQLPAP 5762
>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5709 PAQLPAP 5715
>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5763 PAQLPAP 5769
>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5697 PAQLPAP 5703
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5726 PAQLPAP 5732
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5712 PAQLPAP 5718
>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5701 PAQLPAP 5707
>sp|HELI1_SFAVA|PUTATIVE ATP-dependent RNA helicase|Spodoptera frugiperda ascovirus 1a
Query: 1 PPPAQPPAPP 10
P PP PP
Sbjct: 618 PSSQTPPVPP 627
>sp|PP220_ASFWA|POLYPROTEIN pp220|African swine fever virus (isolate
Query: 1 PPPAQP 6
PPP QP
Sbjct: 2281 PPPRQP 2286
>sp|GB_ILTVT|ENVELOPE glycoprotein B|Infectious laryngotracheitis virus (strain Thorne
Query: 1 PPPAQPPAP 9
PP PP P
Sbjct: 791 PPAGTPPRP 799
>sp|GB_ILTVS|ENVELOPE glycoprotein B|Infectious laryngotracheitis virus (strain SA-2)
Query: 1 PPPAQPPAP 9
PP PP P
Sbjct: 791 PPAGTPPRP 799
>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)
Query: 3 PAQPPAP 9
PAQ PAP
Sbjct: 5567 PAQLPAP 5573
>sp|GB_ILTV6|ENVELOPE glycoprotein B|Infectious laryngotracheitis virus (strain 632)
Query: 1 PPPAQPPAP 9
PP PP P
Sbjct: 781 PPAGTPPRP 789
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 PPPAQPP 7
PP AQPP
Sbjct: 476 PPGAQPP 482
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 PPPAQPP 7
PP AQPP
Sbjct: 476 PPGAQPP 482
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 1 PPPAQPPAPP 10
P P P APP
Sbjct: 17 PKPGTPSAPP 26
>sp|ICP46_IIV3|IMMEDIATE-EARLY protein ICP-46 homolog|Invertebrate iridescent virus 3 (IIV-3)
Query: 4 AQPPAPP 10
A+PP PP
Sbjct: 212 AKPPKPP 218
>sp|GB_SUHVF|ENVELOPE glycoprotein B|Suid herpesvirus 1 (strain Indiana-Funkhauser
Query: 1 PPPAQPPAPP 10
P PA P PP
Sbjct: 504 PGPAGTPEPP 513
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 PPPAQPPAPP 10
P +PP PP
Sbjct: 178 PVSNRPPTPP 187
>sp|H962R_ASFWA|PUTATIVE primase C962R|African swine fever virus (isolate
Query: 2 PPAQPPA 8
PP +PPA
Sbjct: 108 PPLEPPA 114
>sp|H962R_ASFP4|PUTATIVE primase C962R|African swine fever virus (isolate
Query: 2 PPAQPPA 8
PP +PPA
Sbjct: 108 PPLEPPA 114
>sp|H962R_ASFB7|PUTATIVE primase C962R|African swine fever virus (strain
Query: 2 PPAQPPA 8
PP +PPA
Sbjct: 108 PPLEPPA 114
>sp|NEEDL_BPT4|PRE-BASEPLATE central spike protein Gp5|Enterobacteria phage T4 (Bacteriophage
Query: 3 PAQPPAP 9
PA PP P
Sbjct: 363 PADPPIP 369
22|Sequence|106|115|PPAPPASQLS
>sp|L_DMSVA|RNA-DIRECTED RNA polymerase L|Drosophila melanogaster sigma virus (isolate
Query: 1 PPAPPASQL 9
PP PP+ Q+
Sbjct: 1967 PPGPPSDQV 1975
>sp|HELI1_SFAVA|PUTATIVE ATP-dependent RNA helicase|Spodoptera frugiperda ascovirus 1a
Query: 1 PPAPPA 6
PP PPA
Sbjct: 623 PPVPPA 628
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 PPAPPAS 7
PP PPA+
Sbjct: 183 PPTPPAT 189
>sp|GLYCO_IHNVO|GLYCOPROTEIN hematopoietic necrosis virus (strain
Query: 1 PPAPPASQ 8
PP P ASQ
Sbjct: 490 PPTPSASQ 497
>sp|NEF_HV1ZH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PPAPPASQ 8
PPAPPA++
Sbjct: 20 PPAPPAAE 27
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 1 PPAPPASQL 9
PP PP +++
Sbjct: 14 PPTPPVARV 22
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 2 PAPPASQLS 10
P PPA+ LS
Sbjct: 279 PLPPATVLS 287
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 2 PAPPASQLS 10
P PPA+ LS
Sbjct: 279 PLPPATVLS 287
23|Sequence|111|120|ASQLSGSQTG
***** No hits found ******
24|Sequence|116|125|GSQTGGSSSV
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 2 SQTGGSS 8
SQTGG+S
Sbjct: 132 SQTGGNS 138
25|Sequence|121|130|GSSSVKKAPH
***** No hits found ******
26|Sequence|126|135|KKAPHPAVTS
>sp|CARG1_BPCA1|CARGO protein 1|Bacteroides phage crAss001 (Bacteroides phage
Query: 1 KKAPHPAVTS 10
KK P+P+V S
Sbjct: 275 KKKPYPSVPS 284
>sp|VCP_VACCW|COMPLEMENT control protein C3|Vaccinia virus (strain Western Reserve)
Query: 2 KAPHPAVTS 10
K PHP +++
Sbjct: 205 KCPHPTISN 213
>sp|VCP_VACCC|COMPLEMENT control protein C3|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KAPHPAVTS 10
K PHP +++
Sbjct: 205 KCPHPTISN 213
27|Sequence|131|140|PAVTSAGTPK
>sp|SIGM1_REOVD|OUTER capsid protein sigma-1|Reovirus type 3 (strain Dearing)
Query: 2 AVTSAGTP 9
AVTSAG P
Sbjct: 169 AVTSAGAP 176
>sp|POL_WDSV|GAG-POL polyprotein|Walleye dermal sarcoma virus (WDSV)
Query: 3 VTSAGTP 9
VTSAGTP
Sbjct: 1311 VTSAGTP 1317
>sp|HEMA_I49A1|HEMAGGLUTININ A virus (strain A/Duck/Germany/1949
Query: 2 AVTSAGTPK 10
++TSAGT K
Sbjct: 137 SITSAGTTK 145
28|Sequence|136|145|AGTPKRVIVQ
>sp|POL2_RRVC|RNA2 polyprotein|Raspberry ringspot virus (strain cherry)
Query: 2 GTPKRVIV 9
GTP RVI+
Sbjct: 382 GTPVRVII 389
>sp|POL2_RRVS|RNA2 polyprotein|Raspberry ringspot virus (strain S)
Query: 2 GTPKRVIV 9
GTP RVI+
Sbjct: 383 GTPVRVII 390
>sp|RDRP_SMYEA|RNA replication protein|Strawberry mild yellow edge-associated virus
Query: 2 GTPKRVIV 9
GTPK ++V
Sbjct: 247 GTPKELVV 254
29|Sequence|141|150|RVIVQASTSE
***** No hits found ******
30|Sequence|146|155|ASTSELLRCL
>sp|KBTB1_VACCW|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Western
Query: 1 ASTSELLRCL 10
+ T ELLRCL
Sbjct: 198 SCTVELLRCL 207
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 1 ASTSELLRCL 10
+ T ELLRCL
Sbjct: 198 SCTVELLRCL 207
>sp|KBTB1_CAMPS|KELCH repeat and BTB domain-containing|Camelpox virus (strain CMS)
Query: 3 TSELLRCL 10
T ELLRCL
Sbjct: 200 TVELLRCL 207
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 3 TSELLRCL 10
T ELLRCL
Sbjct: 200 TVELLRCL 207
>sp|KBTB1_ECTVM|KELCH repeat and BTB domain-containing|Ectromelia virus (strain Moscow)
Query: 3 TSELLRCL 10
T ELLRCL
Sbjct: 200 TVELLRCL 207
>sp|YR358_MIMIV|UNCHARACTERIZED protein R358|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 STSELLRC 9
ST+E LRC
Sbjct: 190 STTETLRC 197
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 1 ASTSELLRCL 10
+ T ELL+CL
Sbjct: 198 SCTVELLKCL 207
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 3 TSELLRCL 10
T ELL+CL
Sbjct: 200 TVELLKCL 207
31|Sequence|151|160|LLRCLGEFLC
>sp|FPS_AVISP|TYROSINE-PROTEIN kinase transforming protein Fps|Avian sarcoma virus (strain PRCII)
Query: 1 LLRCLGEFL 9
LL+C G+FL
Sbjct: 184 LLKCSGDFL 192
>sp|V027_FOWPN|G-PROTEIN coupled receptor homolog FPV027|Fowlpox virus (strain NVSL) (FPV)
Query: 5 LGEFLC 10
LGEFLC
Sbjct: 94 LGEFLC 99
>sp|TEG6_HHV2H|TEGUMENT protein UL55|Human herpesvirus 2 (strain HG52)
Query: 2 LRCLGEFLC 10
LRC G F C
Sbjct: 107 LRCTGPFSC 115
>sp|RDRP_AMV|RNA-DIRECTED RNA polymerase 2a|Alfalfa mosaic virus (AMV)
Query: 1 LLRCLG 6
LLRCLG
Sbjct: 4 LLRCLG 9
>sp|R1AB_BYVU|REPLICASE polyprotein 1ab|Beet yellows virus (isolate Ukraine)
Query: 1 LLRCLGEF 8
L+RC G+F
Sbjct: 1554 LIRCAGDF 1561
>sp|MVP_BBTVA|MOVEMENT and RNA silencing protein|Banana bunchy top virus (isolate
Query: 1 LLRCLGEFL 9
L+RCL E+L
Sbjct: 45 LVRCLVEYL 53
>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 4 CLGEFLC 10
C G FLC
Sbjct: 2265 CEGSFLC 2271
>sp|GP_INSV|ENVELOPMENT polyprotein|Impatiens necrotic spot virus (INSV)
Query: 2 LRCLGEFLC 10
L C G FLC
Sbjct: 907 LSCKGCFLC 915
>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 4 CLGEFLC 10
C G FLC
Sbjct: 2265 CEGSFLC 2271
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 CLGEFLC 10
C G+F+C
Sbjct: 604 CSGKFIC 610
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 1 LLRCLGEF 8
+LRC+G++
Sbjct: 137 ILRCIGDY 144
32|Sequence|156|165|GEFLCRRCYR
>sp|POLN_TYMVC|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate
Query: 2 EFLCRRCYR 10
+F CRRC R
Sbjct: 1767 DFFCRRCPR 1775
>sp|POLN_TYMV|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus
Query: 2 EFLCRRCYR 10
+F CRRC R
Sbjct: 1767 DFFCRRCPR 1775
>sp|POLN_TYMVA|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate
Query: 2 EFLCRRC 8
+F CRRC
Sbjct: 1767 DFFCRRC 1773
>sp|POLG_PEMVM|GENOME polyprotein|Peanut mottle virus (strain M)
Query: 3 FLCRRCY 9
++CR+CY
Sbjct: 1025 YICRKCY 1031
>sp|S7_DPIRV|UNCHARACTERIZED protein S7|Diadromus pulchellus idnoreovirus 1 (DpIRV-1)
Query: 5 CRRCYR 10
CR CYR
Sbjct: 344 CRECYR 349
>sp|V027_FOWPN|G-PROTEIN coupled receptor homolog FPV027|Fowlpox virus (strain NVSL) (FPV)
Query: 1 GEFLCR 6
GEFLCR
Sbjct: 95 GEFLCR 100
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 GEFLCRRCY 9
G F+C CY
Sbjct: 2326 GSFICELCY 2334
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3442 GSFLCGSC 3449
>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)
Query: 1 GEFLCRRCY 9
G + CR CY
Sbjct: 6114 GNYKCRNCY 6122
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 GEFLCRRCY 9
G F+C CY
Sbjct: 2326 GSFICELCY 2334
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3442 GSFLCGSC 3449
>sp|THYX_BPML5|PROBABLE flavin-dependent thymidylate synthase|Mycobacterium phage L5
Query: 1 GEFLCRRCYR 10
EF R CYR
Sbjct: 45 AEFAGRNCYR 54
>sp|US02_EHV1K|US1 protein|Equine herpesvirus 1 (strain Kentucky
Query: 2 EFLCRRCY 9
EFL R+C+
Sbjct: 31 EFLSRQCF 38
>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain
Query: 1 GEFLCRRC 8
G+F CR C
Sbjct: 1806 GDFTCRVC 1813
>sp|VF302_IIV6|PUTATIVE zinc finger protein 302L|Invertebrate iridescent virus 6 (IIV-6)
Query: 3 FLCRRC 8
F+CR+C
Sbjct: 35 FVCRKC 40
>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 1 GEFLCRRC 8
G+F CR C
Sbjct: 1806 GDFTCRVC 1813
>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)
Query: 1 GEFLCRRCY 9
G + CR CY
Sbjct: 5990 GLYKCRNCY 5998
>sp|VG53_BPMD2|GENE 53 protein|Mycobacterium phage D29 (Mycobacteriophage D29)
Query: 2 EFLCRRCY 9
EFL RCY
Sbjct: 224 EFLGGRCY 231
>sp|POL1_BBWVS|RNA1 polyprotein|Broad bean wilt virus 1
Query: 1 GEFLCRRCYR 10
GE LC++ R
Sbjct: 1063 GELLCKKAER 1072
>sp|US02_EHV1B|GENE 68 protein|Equine herpesvirus 1 (strain Ab4p)
Query: 2 EFLCRRCY 9
EFL R+C+
Sbjct: 31 EFLSRQCF 38
>sp|KITH_RACVI|THYMIDINE kinase|Raccoon poxvirus (RCN)
Query: 4 LCRRCY 9
+CR+CY
Sbjct: 169 VCRKCY 174
>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)
Query: 1 GEFLCRRCYR 10
G LC C+R
Sbjct: 37 GSTLCAECFR 46
>sp|MUTSL_MIMIV|PUTATIVE DNA mismatch repair protein|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 LCRRCY 9
LCR+C+
Sbjct: 1040 LCRKCH 1045
>sp|KITH_SHEVK|THYMIDINE kinase|Sheeppox virus (strain KS-1) (SPPV)
Query: 4 LCRRCY 9
+CR+CY
Sbjct: 169 VCRKCY 174
>sp|POLR_PHMV|RNA replicase polyprotein|Physalis mottle virus (PhMV) (Belladonna
Query: 2 EFLCRRC 8
+F CR C
Sbjct: 101 DFFCRNC 107
>sp|POLN_EPMV|NON-STRUCTURAL replication polyprotein|Eggplant mosaic virus
Query: 2 EFLCRRC 8
+F CR C
Sbjct: 1762 DFFCRNC 1768
>sp|YR811_MIMIV|PUTATIVE ariadne-like RING finger protein|Acanthamoeba polyphaga mimivirus
Query: 1 GEFLCRRC 8
G+F+C C
Sbjct: 912 GKFICEEC 919
>sp|E1A_ADE07|EARLY E1A protein|Human adenovirus B serotype 7
Query: 2 EFLCRRCY 9
E LC CY
Sbjct: 177 ELLCSLCY 184
>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)
Query: 4 LCRRCY 9
LCR+C+
Sbjct: 4435 LCRKCW 4440
>sp|5052R_ASFWA|PROTEIN MGF 505-2R|African swine fever virus (isolate
Query: 4 LCRRCYR 10
+C+ CYR
Sbjct: 451 ICKDCYR 457
>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain
Query: 4 LCRRCY 9
LCR+C+
Sbjct: 4424 LCRKCW 4429
>sp|VG40_SHV21|UNCHARACTERIZED gene 40 protein|Saimiriine herpesvirus 2 (strain 11)
Query: 2 EFLCRRCY 9
+FLC CY
Sbjct: 367 DFLCTICY 374
>sp|Y034_NPVOP|UNCHARACTERIZED 24.0 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 3 FLCRRCY 9
F CR CY
Sbjct: 108 FSCRLCY 114
>sp|VSR_LSV|RNA silencing suppressor|Lily symptomless virus (LSV)
Query: 5 CRRCYR 10
C RCYR
Sbjct: 83 CERCYR 88
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3388 GSFLCGSC 3395
>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3479 GSFLCGSC 3486
>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3432 GSFLCGSC 3439
>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3439 GSFLCGSC 3446
>sp|E1A_ADES7|EARLY E1A protein|Simian adenovirus serotype 7 (SAdV-7)
Query: 2 EFLCRRCY 9
E LC CY
Sbjct: 174 EILCSLCY 181
>sp|KITH_VARV|THYMIDINE kinase|Variola virus
Query: 4 LCRRCY 9
+CR+CY
Sbjct: 169 VCRKCY 174
>sp|KITH_VAR67|THYMIDINE kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 LCRRCY 9
+CR+CY
Sbjct: 169 VCRKCY 174
>sp|AC34_NPVAC|PROTEIN Ac34|Autographa californica nuclear polyhedrosis virus
Query: 3 FLCRRCY 9
F CR CY
Sbjct: 114 FRCRLCY 120
>sp|KITH_VACCW|THYMIDINE kinase|Vaccinia virus (strain Western Reserve)
Query: 4 LCRRCY 9
+CR+CY
Sbjct: 169 VCRKCY 174
>sp|KITH_VACCC|THYMIDINE kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 LCRRCY 9
+CR+CY
Sbjct: 169 VCRKCY 174
>sp|KITH_MONPZ|THYMIDINE kinase|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 4 LCRRCY 9
+CR+CY
Sbjct: 169 VCRKCY 174
>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3479 GSFLCGSC 3486
>sp|KITH_VACCT|THYMIDINE kinase|Vaccinia virus (strain Tian Tan)
Query: 4 LCRRCY 9
+CR+CY
Sbjct: 169 VCRKCY 174
>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3432 GSFLCGSC 3439
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 GEFLCRRCY 9
G F+C C+
Sbjct: 2356 GSFICELCH 2364
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3472 GSFLCGSC 3479
>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3439 GSFLCGSC 3446
>sp|KITH_VACCA|THYMIDINE kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 4 LCRRCY 9
+CR+CY
Sbjct: 169 VCRKCY 174
>sp|KITH_MONPV|THYMIDINE kinase|Monkeypox virus (MPXV)
Query: 4 LCRRCY 9
+CR+CY
Sbjct: 169 VCRKCY 174
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3388 GSFLCGSC 3395
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 GEFLCRRCY 9
G F+C C+
Sbjct: 2306 GSFICELCH 2314
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3422 GSFLCGSC 3429
>sp|UL92_HHV7J|PROTEIN U63|Human herpesvirus 7 (strain JI)
Query: 3 FLCRRCYR 10
F+C RC++
Sbjct: 42 FICVRCFK 49
>sp|KITH_RFVKA|THYMIDINE kinase|Rabbit fibroma virus (strain Kasza)
Query: 4 LCRRCY 9
+CR+CY
Sbjct: 171 VCRKCY 176
>sp|VSR_HELVS|RNA silencing suppressor|Helenium virus S (HelVS)
Query: 5 CRRCYR 10
C RCYR
Sbjct: 60 CERCYR 65
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3384 GSFLCGSC 3391
>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3384 GSFLCGSC 3391
>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3384 GSFLCGSC 3391
>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3384 GSFLCGSC 3391
>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3384 GSFLCGSC 3391
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 GEFLCRRCY 9
G F+C C+
Sbjct: 2356 GSFICELCH 2364
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3472 GSFLCGSC 3479
>sp|Y098_OSHVF|UNCHARACTERIZED protein ORF98|Ostreid herpesvirus 1 (isolate France)
Query: 3 FLCRRCY 9
FLC CY
Sbjct: 147 FLCLYCY 153
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 GEFLCRRCY 9
G F+C C+
Sbjct: 2306 GSFICELCH 2314
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3422 GSFLCGSC 3429
>sp|KITH_MYXVU|THYMIDINE kinase|Myxoma virus (strain Uriarra) (MYXV)
Query: 4 LCRRCY 9
+CR+CY
Sbjct: 171 VCRKCY 176
>sp|UL92_HCMVM|UNCHARACTERIZED protein UL92|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 FLCRRCYR 10
+ C RC+R
Sbjct: 27 YACTRCFR 34
>sp|UL92_HCMVA|PROTEIN UL92|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 FLCRRCYR 10
+ C RC+R
Sbjct: 27 YACTRCFR 34
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3384 GSFLCGSC 3391
>sp|KITH_MYXVL|THYMIDINE kinase|Myxoma virus (strain Lausanne) (MYXV)
Query: 4 LCRRCY 9
+CR+CY
Sbjct: 171 VCRKCY 176
>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3384 GSFLCGSC 3391
>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3384 GSFLCGSC 3391
>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3384 GSFLCGSC 3391
>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3384 GSFLCGSC 3391
>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GEFLCRRCYR 10
G+FL RC++
Sbjct: 81 GKFLVFRCFQ 90
>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3417 GSFLCGSC 3424
>sp|Z_PARVP|RING finger protein Z|Parana mammarenavirus (isolate
Query: 1 GEFLCRRCY 9
G F C+RC+
Sbjct: 34 GRFNCKRCW 42
>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3474 GSFLCGSC 3481
>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3471 GSFLCGSC 3478
>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3417 GSFLCGSC 3424
>sp|VT2_MYXVL|TUMOR necrosis factor soluble receptor|Myxoma virus (strain Lausanne)
Query: 1 GEFLCRRCYR 10
G+ LC +C R
Sbjct: 142 GDVLCTKCPR 151
>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3474 GSFLCGSC 3481
>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)
Query: 1 GEFLCRRC 8
G FLC C
Sbjct: 3471 GSFLCGSC 3478
33|Sequence|161|170|RRCYRLKHLS
>sp|POL_SIVGB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate GB1)
Query: 1 RRCYRLKHL 9
++CYRLKHL
Sbjct: 26 KKCYRLKHL 34
>sp|GAG_SIVGB|GAG polyprotein|Simian immunodeficiency virus (isolate GB1)
Query: 1 RRCYRLKHL 9
++CYRLKHL
Sbjct: 26 KKCYRLKHL 34
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
R+ YRLKHL
Sbjct: 26 RKKYRLKHL 34
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
R+ YRLKHL
Sbjct: 26 RKKYRLKHL 34
>sp|VG36_ALHV1|PUTATIVE tyrosine kinase 36|Alcelaphine herpesvirus 1 (strain C500)
Query: 1 RRCYRLKH 8
RRCY L+H
Sbjct: 267 RRCYLLRH 274
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKHL
Sbjct: 26 KKAYRLKHL 34
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKHL
Sbjct: 26 KKAYRLKHL 34
>sp|Y77_BPT7|PROTEIN 7.7|Escherichia phage T7 (Bacteriophage T7)
Query: 2 RCYRLKHLS 10
RCY +KHL+
Sbjct: 54 RCYNIKHLT 62
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 RRCYRLKHL 9
++CY L HL
Sbjct: 1096 QKCYELSHL 1104
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 RRCYRLKHL 9
++CY L HL
Sbjct: 1096 QKCYELSHL 1104
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKHL
Sbjct: 26 KKKYRLKHL 34
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKHL
Sbjct: 26 KKKYRLKHL 34
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKHL
Sbjct: 26 KKKYRLKHL 34
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKHL
Sbjct: 26 KKKYRLKHL 34
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKHL
Sbjct: 26 KKKYRLKHL 34
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKHL
Sbjct: 26 KKKYRLKHL 34
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKHL
Sbjct: 26 KKKYRLKHL 34
>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKHL
Sbjct: 26 KKKYRLKHL 34
>sp|GAG_HV1YB|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKHL
Sbjct: 26 KKKYRLKHL 34
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKHL
Sbjct: 26 KKKYRLKHL 34
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKHL
Sbjct: 26 KKKYRLKHL 34
>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKHL
Sbjct: 26 KKKYRLKHL 34
>sp|GAG_HV193|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKHL
Sbjct: 26 KKKYRLKHL 34
>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKHL
Sbjct: 26 KKKYRLKHL 34
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
R+ Y++KHL
Sbjct: 26 RKSYKIKHL 34
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
R+ Y++KHL
Sbjct: 26 RKSYKIKHL 34
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKHL
Sbjct: 26 KKRYRLKHL 34
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKHL
Sbjct: 26 KKRYRLKHL 34
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 YRLKHL 9
YRLKHL
Sbjct: 29 YRLKHL 34
>sp|GAG_HV1U4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 YRLKHL 9
YRLKHL
Sbjct: 29 YRLKHL 34
>sp|CVC1_HHV8P|CAPSID vertex component 1|Human herpesvirus 8 type P
Query: 2 RCYRLKHL 9
RC+RL H+
Sbjct: 14 RCHRLAHV 21
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YR+KHL
Sbjct: 26 KKKYRMKHL 34
>sp|CVC1_EHV2|CAPSID vertex component 1|Equine herpesvirus 2 (strain 86/87)
Query: 1 RRCYRLKHL 9
RRC RL H+
Sbjct: 13 RRCGRLAHV 21
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YR+KHL
Sbjct: 26 KKKYRMKHL 34
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKQYRLKHI 34
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YR+KHL
Sbjct: 26 KKQYRIKHL 34
>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKQYRLKHI 34
>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKQYRLKHI 34
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YR+KHL
Sbjct: 26 KKQYRIKHL 34
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKKYRLKHI 34
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKKYRLKHI 34
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKKYRLKHI 34
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKKYRLKHI 34
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKKYRLKHI 34
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKKYRLKHI 34
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YR+KHL
Sbjct: 26 KKKYRIKHL 34
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKKYRLKHI 34
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKKYRLKHI 34
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKKYRLKHI 34
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
R+ Y+LKH+
Sbjct: 26 RKKYKLKHI 34
>sp|GAG_HV1W2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKKYRLKHI 34
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YR+KHL
Sbjct: 26 KKKYRIKHL 34
>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKKYRLKHI 34
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKKYRLKHI 34
>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKKYRLKHI 34
>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
R+ Y+LKH+
Sbjct: 26 RKKYKLKHI 34
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKKYRLKHI 34
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKKYRLKHI 34
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKKYRLKHI 34
>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKQYRLKHI 34
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKKYRLKHI 34
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKKYRLKHI 34
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ Y+LKHL
Sbjct: 26 KKKYKLKHL 34
>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RRCYRLKHL 9
++ Y+LKHL
Sbjct: 26 KKKYKLKHL 34
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKRYRLKHV 34
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKKYRLKHI 34
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 RRCYRLKHL 9
++ YRLKH+
Sbjct: 26 KKRYRLKHV 34
>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)
Query: 3 CYRLKHLS 10
CY KHLS
Sbjct: 194 CYLCKHLS 201
34|Sequence|166|175|LKHLSPTDPV
>sp|NSP4_RGDV|NON-STRUCTURAL protein 4|Rice gall dwarf virus (RGDV)
Query: 1 LKHLSPTDPV 10
L+ LSP+DPV
Sbjct: 267 LRSLSPSDPV 276
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 LKHLSPTDPV 10
LKHL+P D V
Sbjct: 1710 LKHLNPCDYV 1719
>sp|PRO_ADES1|PROTEASE adenovirus serotype 1 (SnAdV-1)
Query: 3 HLSPTDP 9
HLSP++P
Sbjct: 134 HLSPSNP 140
>sp|TEG4_EHV1B|TEGUMENT protein UL21 homolog|Equine herpesvirus 1 (strain Ab4p)
Query: 1 LKHLSPTDPV 10
+++ PTDPV
Sbjct: 404 VRYTQPTDPV 413
>sp|TEG4_EHV1V|TEGUMENT protein UL21 homolog|Equine herpesvirus 1 (strain V592)
Query: 1 LKHLSPTDPV 10
+++ PTDPV
Sbjct: 404 VRYTQPTDPV 413
>sp|M1249_ASFP4|MINOR capsid protein M1249L|African swine fever virus (isolate
Query: 1 LKHLSPTDP 9
KHL TDP
Sbjct: 1126 FKHLRVTDP 1134
>sp|M1249_ASFWA|MINOR capsid protein M1249L|African swine fever virus (isolate
Query: 1 LKHLSPTDP 9
KHL TDP
Sbjct: 1126 FKHLRVTDP 1134
>sp|M1249_ASFB7|MINOR capsid protein M1249L|African swine fever virus (strain
Query: 1 LKHLSPTDP 9
KHL TDP
Sbjct: 1126 FKHLRVTDP 1134
>sp|NS1_PAVPK|INITIATOR protein NS1|Porcine parvovirus (strain Kresse) (PPV)
Query: 3 HLSPTDP 9
HL+PT P
Sbjct: 623 HLTPTPP 629
>sp|KITH_EHV2|THYMIDINE kinase|Equine herpesvirus 2 (strain 86/87)
Query: 1 LKHLSPTDPV 10
LK+LSP D V
Sbjct: 489 LKYLSPEDMV 498
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 1 LKHLSPTDPV 10
+KHL T PV
Sbjct: 620 MKHLMTTPPV 629
>sp|056R_IIV6|UNCHARACTERIZED protein 056R|Invertebrate iridescent virus 6 (IIV-6)
Query: 1 LKHLSP 6
LKHLSP
Sbjct: 62 LKHLSP 67
>sp|ENV_BLVB2|ENVELOPE glycoprotein|Bovine leukemia virus (isolate Belgium
Query: 3 HLSPTDP 9
HLSPT P
Sbjct: 500 HLSPTKP 506
35|Sequence|171|180|PTDPVLWLRS
>sp|SCP_VZVD|SMALL capsomere-interacting protein|Varicella-zoster virus (strain
Query: 2 TDPVLWLR 9
TDP+ WLR
Sbjct: 86 TDPMTWLR 93
>sp|NCAP_DMSVA|NUCLEOPROTEIN melanogaster sigma virus (isolate
Query: 1 PTDPVLWL 8
PTDP WL
Sbjct: 389 PTDPRGWL 396
>sp|RIR2_RSIV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Red sea bream iridovirus (RSIV)
Query: 1 PTDPVLW 7
P DP LW
Sbjct: 8 PNDPHLW 14
>sp|GP_SFTS|ENVELOPMENT polyprotein|Dabie bandavirus (Severe fever with
Query: 1 PTDPVLWL 8
P+D VLW+
Sbjct: 168 PSDRVLWI 175
>sp|1A_PZSVT|REPLICATION protein 1a|Pelargonium zonate spot virus (isolate
Query: 1 PTDPVLW 7
P+DP +W
Sbjct: 327 PSDPRIW 333
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 PTDPVLWL 8
P+D VLW+
Sbjct: 168 PSDRVLWI 175
>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)
Query: 3 DPVLWLRS 10
DP LW+ S
Sbjct: 970 DPTLWMES 977
>sp|Y023_OSHVF|UNCHARACTERIZED protein ORF23|Ostreid herpesvirus 1 (isolate France)
Query: 1 PTDPVLWLR 9
PTDP L L+
Sbjct: 1131 PTDPALALQ 1139
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 TDPVLWLRS 10
TD LW+RS
Sbjct: 972 TDQSLWMRS 980
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 TDPVLWLRS 10
TD LW+RS
Sbjct: 972 TDQSLWMRS 980
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 TDPVLWLRS 10
TD LW+RS
Sbjct: 974 TDQSLWMRS 982
>sp|SPIKE_BCHK9|SPIKE glycoprotein|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)
Query: 1 PTDPVLWLR 9
P PV+W R
Sbjct: 367 PPQPVVWRR 375
>sp|VF268_IIV3|UNCHARACTERIZED protein 074L|Invertebrate iridescent virus 3 (IIV-3)
Query: 1 PTDPVLW 7
PT P+LW
Sbjct: 614 PTKPILW 620
>sp|L_NDVB1|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Chicken/United
Query: 2 TDPVLWLRS 10
TDP W S
Sbjct: 159 TDPAFWFHS 167
>sp|L_NDVB|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Beaudette
Query: 2 TDPVLWLRS 10
TDP W S
Sbjct: 159 TDPAFWFHS 167
>sp|POLG_RHDV3|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 1 PTDPVLWLR 9
P +PV W R
Sbjct: 236 PANPVTWYR 244
>sp|RAF_MSV36|SERINE/THREONINE-PROTEIN kinase-transforming protein raf|Murine sarcoma virus 3611
Query: 1 PTDPVLWL 8
PT VLW+
Sbjct: 180 PTGSVLWM 187
>sp|UL01_PSHV1|UNCHARACTERIZED protein UL-1|Psittacid herpesvirus 1 (isolate Amazon
Query: 4 PVLWLR 9
PVLWL+
Sbjct: 383 PVLWLQ 388
>sp|POL2_CRLVP|RNA2 polyprotein|Cherry rasp leaf virus (isolate
Query: 4 PVLWLRS 10
P LWLR+
Sbjct: 904 PTLWLRT 910
36|Sequence|176|185|LWLRSVDRSL
>sp|VP7_AHSV9|CORE protein VP7|African horse sickness virus 9
Query: 1 LWLRSVDRSL 10
LW S+DRSL
Sbjct: 248 LWYTSLDRSL 257
>sp|VP7_AHSV6|CORE protein VP7|African horse sickness virus 6
Query: 1 LWLRSVDRSL 10
LW S+DRSL
Sbjct: 248 LWYTSLDRSL 257
>sp|VP7_AHSV|CORE protein VP7|African horse sickness virus (AHSV)
Query: 1 LWLRSVDRSL 10
LW S+DRSL
Sbjct: 248 LWYTSLDRSL 257
>sp|YL191_MIMIV|UNCHARACTERIZED protein L191|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 WLRSVDRSL 10
W+R VDRS+
Sbjct: 36 WVRRVDRSI 44
>sp|VEGFH_ORFN7|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ7) (OV
Query: 2 WLRSVDRS 9
W+R++D+S
Sbjct: 37 WMRTLDKS 44
>sp|C124_SSV1|UNCHARACTERIZED protein C-124|Sulfolobus spindle-shape virus 1 (SSV1)
Query: 1 LWLRSVDRSL 10
+WL+S+D+S
Sbjct: 17 IWLKSIDQSF 26
>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain
Query: 1 LWLRSVDRSL 10
++LR V+RSL
Sbjct: 287 MYLRGVNRSL 296
>sp|Y04P_BPT4|UNCHARACTERIZED 39.0 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)
Query: 2 WLRSVDRSL 10
WL SVD S+
Sbjct: 34 WLNSVDASI 42
>sp|VF098_IIV3|UNCHARACTERIZED protein 038R|Invertebrate iridescent virus 3 (IIV-3)
Query: 2 WLRSVDRSL 10
W++S D+S+
Sbjct: 297 WIKSSDKSI 305
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 LWLRSVDRSL 10
+W+++ DR L
Sbjct: 308 IWVKNADRKL 317
>sp|RDRP_SHMV|REPLICASE large subunit|Sunn-hemp mosaic virus (SHMV) (TMV
Query: 2 WLRSVDRSL 10
W++SVD+ L
Sbjct: 518 WVKSVDQVL 526
>sp|DPOL_BPPH2|DNA polymerase|Bacillus phage phi29 (Bacteriophage phi-29)
Query: 1 LWLRSVDRSL 10
LWL +VD L
Sbjct: 326 LWLSNVDLEL 335
>sp|L_MOKV|LARGE structural protein|Mokola virus (MOKV)
Query: 1 LWLRSVDRSL 10
LWL+ V+R+L
Sbjct: 1549 LWLQRVERNL 1558
37|Sequence|181|190|VDRSLLLQGW
>sp|VP10_RBSDV|PROTEIN S10|Rice black streaked dwarf virus
Query: 2 DRSLLLQGW 10
D+SLL Q W
Sbjct: 280 DKSLLEQTW 288
>sp|M1_THOGV|MATRIX protein|Thogoto virus (isolate SiAr 126)
Query: 2 DRSLLLQGW 10
DR ++L GW
Sbjct: 220 DRDVVLIGW 228
>sp|ML_THOGV|PROTEIN ML|Thogoto virus (isolate SiAr 126)
Query: 2 DRSLLLQGW 10
DR ++L GW
Sbjct: 220 DRDVVLIGW 228
38|Sequence|186|195|LLQGWQDQGF
>sp|VP47_NPVOP|VIRAL transcription regulator p47|Orgyia pseudotsugata multicapsid
Query: 2 LQGWQDQGF 10
++GWQD+ F
Sbjct: 181 VRGWQDETF 189
>sp|TERS_LAMBD|TERMINASE small subunit|Escherichia phage lambda (Bacteriophage lambda)
Query: 2 LQGWQDQG 9
+Q WQ+QG
Sbjct: 19 IQNWQEQG 26
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 LLQGWQDQGF 10
LLQ WQ G+
Sbjct: 2303 LLQAWQMPGY 2312
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 1 LLQGWQDQGF 10
L+ G+Q++GF
Sbjct: 388 LISGYQNEGF 397
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LLQGWQDQGF 10
L+ G+Q++GF
Sbjct: 388 LISGYQNEGF 397
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 1 LLQGWQDQGF 10
L+ G+Q++GF
Sbjct: 388 LISGYQNEGF 397
>sp|IBMP_CAMVB|TRANSACTIVATOR/VIROPLASMIN protein|Cauliflower mosaic virus (strain Bari
Query: 5 WQDQGF 10
WQDQG
Sbjct: 351 WQDQGL 356
>sp|YVAP_VACCC|UNCHARACTERIZED 9.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 GWQDQGF 10
GW D+GF
Sbjct: 29 GWLDKGF 35
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 LLQGWQDQGF 10
LLQ WQ G+
Sbjct: 2303 LLQKWQMPGY 2312
>sp|TMP_BPN15|TAPE measure protein|Escherichia phage N15 (Bacteriophage N15)
Query: 1 LLQGWQDQG 9
LLQGW++ G
Sbjct: 598 LLQGWKNGG 606
>sp|CAPSD_PVXXC|COAT protein|Potato virus X (strain Xc)
Query: 5 WQDQGF 10
WQ QGF
Sbjct: 147 WQAQGF 152
>sp|CAPSD_PVXX3|COAT protein|Potato virus X (strain X3)
Query: 5 WQDQGF 10
WQ QGF
Sbjct: 148 WQAQGF 153
>sp|CAPSD_PVXU3|COAT protein|Potato virus X (strain UK3)
Query: 5 WQDQGF 10
WQ QGF
Sbjct: 148 WQAQGF 153
>sp|CAPSD_PVXHB|COAT protein|Potato virus X (strain HB)
Query: 5 WQDQGF 10
WQ QGF
Sbjct: 147 WQAQGF 152
>sp|CAPSD_PVXCP|COAT protein|Potato virus X (strain CP)
Query: 5 WQDQGF 10
WQ QGF
Sbjct: 147 WQAQGF 152
>sp|CAPSD_PVX|COAT protein|Potato virus X (PVX)
Query: 5 WQDQGF 10
WQ QGF
Sbjct: 148 WQAQGF 153
>sp|RDRP_IBDVU|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus
Query: 1 LLQGWQDQG 9
L +GW D G
Sbjct: 437 LTRGWSDNG 445
>sp|RDRP_IBDVB|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus
Query: 1 LLQGWQDQG 9
L +GW D G
Sbjct: 437 LTRGWSDNG 445
>sp|POL2_TORVR|RNA2 polyprotein|Tomato ringspot virus (isolate raspberry)
Query: 5 WQDQGF 10
WQ QGF
Sbjct: 1368 WQRQGF 1373
>sp|RDRP_IBDVA|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus
Query: 1 LLQGWQDQG 9
L +GW D G
Sbjct: 436 LTRGWSDNG 444
>sp|RDRP_IBDV|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus
Query: 1 LLQGWQDQG 9
L +GW D G
Sbjct: 437 LTRGWSDNG 445
>sp|RDRP_IBDV5|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus
Query: 1 LLQGWQDQG 9
L +GW D G
Sbjct: 111 LTRGWSDNG 119
>sp|HMUD2_BPSAV|5-HMDU DNA kinase 2|Salmonella phage ViI
Query: 1 LLQGWQDQGF 10
L++GW QG+
Sbjct: 91 LVKGWLAQGY 100
39|Sequence|191|200|QDQGFITPAN
>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote
Query: 1 QDQGFITPAN 10
Q+Q ++TP N
Sbjct: 2285 QNQAYLTPIN 2294
>sp|POL1_GFLV|RNA1 polyprotein|Grapevine fanleaf virus (GFLV)
Query: 2 DQGFITPA 9
D+G+ITP+
Sbjct: 951 DEGWITPS 958
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 DQGFITPAN 10
+ GFI+P N
Sbjct: 2133 ENGFISPEN 2141
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 DQGFITPAN 10
+ GFI+P N
Sbjct: 2133 ENGFISPEN 2141
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 1 QDQGFITP 8
QD G++TP
Sbjct: 38 QDPGYVTP 45
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 1 QDQGFITP 8
QD G++TP
Sbjct: 38 QDPGYVTP 45
>sp|RDRP_ORSVS|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Singapore
Query: 1 QDQGFITPAN 10
Q Q F TPA+
Sbjct: 1187 QQQEFFTPAH 1196
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 DQGFITPAN 10
D+GFIT N
Sbjct: 238 DEGFITLKN 246
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 2 DQGFITPAN 10
D+GFIT N
Sbjct: 238 DEGFITLKN 246
>sp|R1AB_BYVU|REPLICASE polyprotein 1ab|Beet yellows virus (isolate Ukraine)
Query: 1 QDQGFIT 7
+D+GFIT
Sbjct: 297 EDEGFIT 303
>sp|YL417_MIMIV|UNCHARACTERIZED protein L417|Acanthamoeba polyphaga mimivirus (APMV)
Query: 5 FITPAN 10
FITPAN
Sbjct: 452 FITPAN 457
>sp|YR877_MIMIV|PUTATIVE lipocalin R877|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 GFITPA 9
GF+TPA
Sbjct: 96 GFLTPA 101
>sp|POL2_TORVR|RNA2 polyprotein|Tomato ringspot virus (isolate raspberry)
Query: 1 QDQGFITPAN 10
+D GF+ P N
Sbjct: 1307 EDPGFLPPRN 1316
40|Sequence|196|205|ITPANVVFLY
>sp|NCAP_EBLV2|NUCLEOPROTEIN bat lyssavirus 2 (strain
Query: 1 ITPANVV 7
ITPAN+V
Sbjct: 103 ITPANLV 109
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 1 ITPANVVFLY 10
+TP N+ FL+
Sbjct: 388 LTPENLAFLH 397
>sp|POL1_TOTV|RNA1 polyprotein|Tomato torrado virus (isolate Solanum
Query: 3 PANVVFLY 10
PA+V FLY
Sbjct: 745 PAHVQFLY 752
41|Sequence|201|210|VVFLYMLCRD
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 3 FLYMLCRD 10
LY++CRD
Sbjct: 34 LLYLVCRD 41
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 1 VVFLYMLCRD 10
+VF Y CRD
Sbjct: 312 LVFTYRQCRD 321
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 1 VVFLYMLCRD 10
+VF Y CRD
Sbjct: 312 LVFTYRQCRD 321
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 2 VFLYMLC 8
+FLY+LC
Sbjct: 231 MFLYLLC 237
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 VFLYMLCR 9
V+LY LC+
Sbjct: 47 VYLYCLCK 54
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 VFLYMLCR 9
V+LY LC+
Sbjct: 47 VYLYCLCK 54
>sp|YR580_MIMIV|PUTATIVE ankyrin repeat protein R580|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 LYMLCR 9
LYMLCR
Sbjct: 234 LYMLCR 239
>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VFLYMLCRD 10
+F Y+LC D
Sbjct: 187 LFFYILCYD 195
>sp|CEP2_HCMVM|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VFLYMLCRD 10
+F Y+LC D
Sbjct: 187 LFFYILCYD 195
>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)
Query: 1 VVFLYML 7
VVFLY+L
Sbjct: 3510 VVFLYLL 3516
42|Sequence|206|215|MLCRDVISSE
>sp|YL397_MIMIV|UNCHARACTERIZED protein L397|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 LCRDVISSE 10
LCR +IS E
Sbjct: 120 LCRQIISGE 128
>sp|IE61_CHV9D|E3 ubiquitin-protein ligase IE61|Cercopithecine herpesvirus 9
Query: 2 LCRDVISS 9
LCR V+SS
Sbjct: 56 LCRTVVSS 63
>sp|SHUT_SUHVK|VIRION host shutoff protein|Suid herpesvirus 1 (strain Kaplan)
Query: 3 CRDVISS 9
CRDV++S
Sbjct: 195 CRDVLAS 201
>sp|YL035_MIMIV|PUTATIVE BTB/POZ domain-containing protein L35|Acanthamoeba polyphaga
Query: 2 LCRDVISS 9
+CRD+I S
Sbjct: 69 VCRDIIES 76
>sp|YL415_MIMIV|PUTATIVE FNIP repeat-containing protein L415|Acanthamoeba polyphaga
Query: 1 MLCRDVI 7
MLC DVI
Sbjct: 6 MLCTDVI 12
>sp|CLINK_FBNY2|CELL cycle link protein|Faba bean necrotic yellows virus
Query: 1 MLCRDVISSE 10
+LCR+V+ E
Sbjct: 110 LLCREVLPPE 119
43|Sequence|211|220|VISSEVGSDH
>sp|ST_POVS1|SMALL t antigen|Simian virus 12 (strain wt100)
Query: 3 SSEVGSD 9
SSEVGSD
Sbjct: 79 SSEVGSD 85
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 1 VISSEVGSDH 10
+ SE+GS+H
Sbjct: 104 ICQSEIGSEH 113
>sp|YL671_MIMIV|UNCHARACTERIZED protein L671|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 SSEVGSDH 10
SSEV SDH
Sbjct: 94 SSEVFSDH 101
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 VISSEVGSD 9
V SE+GSD
Sbjct: 104 VCQSEIGSD 112
44|Sequence|216|225|VGSDHELQAV
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 1 VGSDHELQA 9
VG +H+LQA
Sbjct: 767 VGDNHDLQA 775
45|Sequence|221|230|ELQAVLLTCL
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 ELQAVLLTCL 10
ELQ LL CL
Sbjct: 702 ELQVYLLNCL 711
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 ELQAVLLTCL 10
ELQ LL CL
Sbjct: 702 ELQVYLLNCL 711
46|Sequence|226|235|LLTCLYLSYS
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 LLTCLYLSY 9
LL C YL+Y
Sbjct: 2095 LLVCTYLAY 2103
>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 2 LTCLYLSYS 10
L CL+L YS
Sbjct: 1265 LLCLFLCYS 1273
>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 2 LTCLYLSYS 10
L CL+L YS
Sbjct: 1265 LLCLFLCYS 1273
>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 2 LTCLYLSYS 10
L CL+L YS
Sbjct: 1235 LFCLFLCYS 1243
>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 2 LTCLYLSYS 10
L CL+L YS
Sbjct: 1265 LFCLFLCYS 1273
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 LLTCLYLSYS 10
LL CLY++ S
Sbjct: 1161 LLICLYVALS 1170
>sp|YR407_MIMIV|PUTATIVE RNA methyltransferase R407|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 CLYLSYS 10
C+YL YS
Sbjct: 139 CIYLQYS 145
47|Sequence|231|240|YLSYSYMGNE
>sp|VP91_NPVOP|CAPSID-ASSOCIATED protein Vp91|Orgyia pseudotsugata multicapsid polyhedrosis virus
Query: 3 SYSYMGN 9
+Y+YMGN
Sbjct: 734 AYAYMGN 740
>sp|LTP_EHV2|LARGE tegument protein deneddylase|Equine herpesvirus 2 (strain 86/87)
Query: 1 YLSYSYMGN 9
YL SY+GN
Sbjct: 3064 YLKGSYLGN 3072
48|Sequence|236|245|YMGNEISYPL
>sp|CPM_LIYV9|MINOR capsid protein|Lettuce infectious yellows virus (isolate
Query: 2 MGNEISYPL 10
MGN ISY L
Sbjct: 196 MGNPISYNL 204
>sp|CHMA_BPPA3|CHIMALLIN phage PhiPA3 (Pseudomonas aeruginosa
Query: 1 YMGNEISY 8
Y+GN ++Y
Sbjct: 513 YLGNSVTY 520
>sp|HEMA_I71A2|HEMAGGLUTININ A virus (strain A/Turkey/Oregon/1971
Query: 3 GNEISYP 9
GN+I YP
Sbjct: 101 GNDICYP 107
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 3 GNEISYP 9
GN+I YP
Sbjct: 101 GNDICYP 107
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 3 GNEISYP 9
GN+I YP
Sbjct: 101 GNDICYP 107
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 3 GNEISYP 9
GN+I YP
Sbjct: 101 GNDICYP 107
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 3 GNEISYP 9
GN+I YP
Sbjct: 101 GNDICYP 107
>sp|OE66_NPVAC|NON-SULFATED chondroitin lyase E66|Autographa californica nuclear polyhedrosis
Query: 2 MGNEISYPL 10
+GN I+YPL
Sbjct: 354 IGNFITYPL 362
>sp|POLG_CILVC|RNA replication protein|Citrus leprosis virus C (isolate
Query: 1 YMGNEISY 8
YMG E+S+
Sbjct: 1413 YMGRELSH 1420
>sp|RPOLV_BPN4|VIRION DNA-directed RNA polymerase|Enterobacteria phage N4 (Bacteriophage
Query: 1 YMGNEIS 7
Y GNE+S
Sbjct: 2243 YQGNEVS 2249
>sp|V244_FOWPN|PUTATIVE ankyrin repeat protein FPV244|Fowlpox virus (strain NVSL) (FPV)
Query: 3 GNEISY 8
GNEISY
Sbjct: 131 GNEISY 136
>sp|YORM_TTV1K|UNCHARACTERIZED 38.6 kDa protein|Thermoproteus tenax virus 1 (strain
Query: 4 NEISYP 9
NE+SYP
Sbjct: 116 NEVSYP 121
49|Sequence|241|250|ISYPLKPFLV
>sp|POLG_TAMV|GENOME polyprotein|Tamarillo mosaic virus
Query: 1 ISYPLKPFL 9
ISYPLKP L
Sbjct: 153 ISYPLKPML 161
>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)
Query: 1 ISYPLKPFL 9
+SYPLKP L
Sbjct: 2933 VSYPLKPML 2941
>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus
Query: 1 ISYPLKPFL 9
++YPLKP L
Sbjct: 2931 VTYPLKPIL 2939
>sp|POLG_RGMVD|GENOME polyprotein|Ryegrass mosaic virus (isolate Denmark/Danish)
Query: 1 ISYPLKPF 8
I+YPL+PF
Sbjct: 2960 IAYPLEPF 2967
>sp|POLG_TEV|GENOME polyprotein|Tobacco etch virus (TEV)
Query: 1 ISYPLKPFL 9
+SYPLKP +
Sbjct: 2929 VSYPLKPMV 2937
>sp|POL1_BAMMN|GENOME polyprotein 1|Barley mild mosaic virus (strain
Query: 3 YPLKPFLV 10
YP++PF+V
Sbjct: 2147 YPVRPFVV 2154
>sp|POLG_BCMNN|GENOME polyprotein|Bean common mosaic necrosis virus
Query: 1 ISYPLKPFL 9
I YPLKP +
Sbjct: 2939 IEYPLKPMV 2947
>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)
Query: 1 ISYPLKPFL 9
I YPLKP +
Sbjct: 2939 IEYPLKPIV 2947
>sp|POLG_SBMVG|GENOME polyprotein|Soybean mosaic virus (strain G2)
Query: 1 ISYPLKPFL 9
I YPLKP +
Sbjct: 2939 IEYPLKPIV 2947
>sp|POLG_PPVSK|GENOME polyprotein|Plum pox potyvirus (strain SK
Query: 1 ISYPLKPFL 9
+ YP+KP L
Sbjct: 3014 VEYPIKPLL 3022
>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)
Query: 1 ISYPLKPFL 9
+ YP+KP L
Sbjct: 3014 VEYPIKPLL 3022
>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)
Query: 1 ISYPLKPFL 9
+ YP+KP L
Sbjct: 2999 VEYPIKPLL 3007
>sp|POLG_PPVEA|GENOME polyprotein|Plum pox potyvirus (strain El
Query: 1 ISYPLKPFL 9
+ YP+KP L
Sbjct: 1392 VEYPIKPLL 1400
>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)
Query: 1 ISYPLKPFL 9
+ YP+KP L
Sbjct: 3015 VEYPIKPLL 3023
>sp|POLG_CYVV|GENOME polyprotein|Clover yellow vein virus
Query: 1 ISYPLKPFL 9
+++PLKP L
Sbjct: 266 VTFPLKPIL 274
>sp|POLG_OMV|GENOME polyprotein|Ornithogalum mosaic virus
Query: 1 ISYPLKPFL 9
I YPL+P L
Sbjct: 1011 IEYPLQPVL 1019
>sp|POLG_PSBMV|GENOME polyprotein|Pea seed-borne mosaic virus (strain
Query: 1 ISYPLKPFL 9
+ YPLKP +
Sbjct: 3080 VEYPLKPVM 3088
>sp|POLG_BTMV|GENOME polyprotein|Beet mosaic virus (BtMV)
Query: 1 ISYPLKPFL 9
+S+PLKP +
Sbjct: 2959 VSFPLKPIV 2967
>sp|POLG_PWVTB|GENOME polyprotein|Passionfruit woodiness virus (strain Tip
Query: 1 ISYPLKPFL 9
+ YPLKP +
Sbjct: 142 VEYPLKPMV 150
>sp|POLG_PWVSE|GENOME polyprotein|Passionfruit woodiness virus (strain Severe)
Query: 1 ISYPLKPFL 9
+ YPLKP +
Sbjct: 142 VEYPLKPMV 150
>sp|POLG_PWVMI|GENOME polyprotein|Passionfruit woodiness virus (strain Mild)
Query: 1 ISYPLKPFL 9
+ YPLKP +
Sbjct: 142 VEYPLKPMV 150
>sp|037R_FRG3G|UNCHARACTERIZED protein 037R|Frog virus 3 (isolate Goorha)
Query: 3 YPLKPFLV 10
YP+KPF V
Sbjct: 28 YPVKPFTV 35
>sp|POLG_ZYMVS|GENOME polyprotein|Zucchini yellow mosaic virus (strain
Query: 1 ISYPLKPFL 9
+ YPLKP +
Sbjct: 2956 VEYPLKPIV 2964
>sp|POLG_ZYMVR|GENOME polyprotein|Zucchini yellow mosaic virus (strain
Query: 1 ISYPLKPFL 9
+ YPLKP +
Sbjct: 2956 VEYPLKPIV 2964
>sp|POLG_ZYMVC|GENOME polyprotein|Zucchini yellow mosaic virus (strain
Query: 1 ISYPLKPFL 9
+ YPLKP +
Sbjct: 2953 VEYPLKPIV 2961
>sp|POLG_WMV2U|GENOME polyprotein|Watermelon mosaic virus II (isolate
Query: 1 ISYPLKPFL 9
+ YPLKP +
Sbjct: 890 VEYPLKPIV 898
>sp|POLG_WMV2T|GENOME polyprotein|Watermelon mosaic virus II (isolate
Query: 1 ISYPLKPFL 9
+ YPLKP +
Sbjct: 328 VEYPLKPIV 336
>sp|POLG_WMV2A|GENOME polyprotein|Watermelon mosaic virus II (isolate
Query: 1 ISYPLKPFL 9
+ YPLKP +
Sbjct: 175 VEYPLKPIV 183
>sp|POLG_PVYYO|GENOME polyprotein|Potato virus Y (strain Yo)
Query: 1 ISYPLKPFL 9
+ YPLKP +
Sbjct: 158 VEYPLKPIV 166
>sp|POLG_PVYN|GENOME polyprotein|Potato virus Y (strain N)
Query: 1 ISYPLKPFL 9
+ YPLKP +
Sbjct: 2937 VEYPLKPIV 2945
>sp|POLG_PVYHU|GENOME polyprotein|Potato virus Y (strain Hungarian)
Query: 1 ISYPLKPFL 9
+ YPLKP +
Sbjct: 2935 VEYPLKPIV 2943
>sp|POLG_PEMV|GENOME polyprotein|Pepper mottle virus (PeMV)
Query: 1 ISYPLKPFL 9
+ YPLKP +
Sbjct: 255 VEYPLKPIV 263
>sp|VG17_BPP22|SUPERINFECTION exclusion protein|Salmonella phage P22 (Bacteriophage P22)
Query: 4 PLKPFLV 10
P+KPF+V
Sbjct: 12 PMKPFIV 18
>sp|POLG_PVYCH|GENOME polyprotein|Potato virus Y (strain Chinese)
Query: 1 ISYPLKPFL 9
+ YPLKP +
Sbjct: 201 VGYPLKPIV 209
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 3 YPLKPFLV 10
YP+ PFL+
Sbjct: 1456 YPIDPFLL 1463
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 3 YPLKPFLV 10
YP+ PFL+
Sbjct: 1453 YPIDPFLL 1460
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 SYPLKPFLV 10
++PL PFL+
Sbjct: 1442 NFPLDPFLL 1450
>sp|L_MOBVC|RNA-DIRECTED RNA polymerase L|Mobala mammarenavirus (isolate Rat/Central African
Query: 3 YPLKPFLV 10
YP+ PFL+
Sbjct: 1453 YPIDPFLM 1460
>sp|POLG_PRSVW|GENOME polyprotein|Papaya ringspot virus (strain W)
Query: 1 ISYPLKPFL 9
+ YP+KP +
Sbjct: 550 VDYPIKPLI 558
>sp|POLG_PRSVP|GENOME polyprotein|Papaya ringspot virus (strain P
Query: 1 ISYPLKPFL 9
+ YP+KP +
Sbjct: 550 VDYPIKPLI 558
>sp|POLG_PRSVH|GENOME polyprotein|Papaya ringspot virus (strain P
Query: 1 ISYPLKPFL 9
+ YP+KP +
Sbjct: 3219 VDYPIKPLI 3227
>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus
Query: 3 YPLKPFLV 10
YP+KP ++
Sbjct: 3331 YPIKPIII 3338
>sp|L_CPXVB|RNA-DIRECTED RNA polymerase L|Cupixi mammarenavirus (isolate Rat/Brasil/BeAn
Query: 3 YPLKPFLV 10
YPL PFL
Sbjct: 1453 YPLNPFLA 1460
>sp|P2_RDVF|MINOR outer capsid protein P2|Rice dwarf virus (isolate Fujian)
Query: 3 YPLKPFLV 10
YP+ PF++
Sbjct: 127 YPILPFMI 134
>sp|P2_RDVO|MINOR outer capsid protein P2|Rice dwarf virus (isolate O)
Query: 3 YPLKPFLV 10
YP+ PF++
Sbjct: 127 YPILPFMI 134
>sp|POLG_PEMVM|GENOME polyprotein|Peanut mottle virus (strain M)
Query: 3 YPLKPFL 9
YPLKP +
Sbjct: 2975 YPLKPVI 2981
>sp|YR366_MIMIV|PUTATIVE ATP-dependent RNA helicase R366|Acanthamoeba polyphaga mimivirus
Query: 2 SYPLKPFLV 10
SYP PF++
Sbjct: 1114 SYPNDPFII 1122
>sp|L_IPPYV|RNA-DIRECTED RNA polymerase L|Ippy mammarenavirus (isolate Rat/Central African
Query: 3 YPLKPFLV 10
YP+ PFL+
Sbjct: 1439 YPIDPFLL 1446
50|Sequence|246|255|KPFLVESCKE
>sp|KR73_ICHVA|PROTEIN kinase ORF73|Ictalurid herpesvirus 1 (strain Auburn)
Query: 1 KPFLVESCK 9
+PFL+E+C+
Sbjct: 254 QPFLIEACE 262
>sp|VSGP_TAFVC|PRE-SMALL/SECRETED glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 1 KPFLVESC 8
KPF V+SC
Sbjct: 299 KPFQVKSC 306
>sp|Y209_ATV|UNCHARACTERIZED protein ORF209|Acidianus two-tailed virus (ATV)
Query: 2 PFLVESCKE 10
P +VE CKE
Sbjct: 194 PIIVEWCKE 202
>sp|YR578_MIMIV|PUTATIVE ankyrin repeat protein R578|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 FLVESC 8
FL+ESC
Sbjct: 249 FLIESC 254
>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain
Query: 1 KPFLVESC 8
KP LV SC
Sbjct: 271 KPVLVASC 278
>sp|DNBI_ELHVK|MAJOR DNA-binding protein|Elephantid herpesvirus 1 (isolate Asian
Query: 2 PFLVESCKE 10
PFL CK+
Sbjct: 193 PFLFTQCKD 201
>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain
Query: 1 KPFLVESC 8
KP LV SC
Sbjct: 271 KPVLVASC 278
>sp|MVP_RYSV|MOVEMENT protein|Rice yellow stunt virus (RYSV)
Query: 3 FLVESCKE 10
FL+ +CKE
Sbjct: 278 FLMRACKE 285
>sp|RDRP_RBDVR|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Raspberry bushy dwarf virus (isolate
Query: 3 FLVESCKE 10
F+V+SC E
Sbjct: 62 FVVDSCNE 69
51|Sequence|251|260|ESCKEAFWDR
>sp|SPIKE_CVPRT|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus
Query: 2 SCKEAFWD 9
+CK A WD
Sbjct: 579 TCKSALWD 586
>sp|SPIKE_CVPR8|SPIKE glycoprotein|Porcine respiratory coronavirus (strain 86/137004
Query: 2 SCKEAFWD 9
+CK A WD
Sbjct: 357 TCKSALWD 364
>sp|SPIKE_CVPPU|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus
Query: 2 SCKEAFWD 9
+CK A WD
Sbjct: 579 TCKSALWD 586
>sp|SPIKE_CVPFS|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus
Query: 2 SCKEAFWD 9
+CK A WD
Sbjct: 581 TCKSALWD 588
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 2 SCKEAFWD 9
+C EA WD
Sbjct: 113 NCLEALWD 120
>sp|SPIKE_FIPV|SPIKE glycoprotein|Feline coronavirus (strain FIPV WSU-79/1146)
Query: 2 SCKEAFWD 9
+CK + WD
Sbjct: 584 TCKSSLWD 591
>sp|SPIKE_CVPMI|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus
Query: 2 SCKEAFWD 9
+CK + WD
Sbjct: 581 TCKSSLWD 588
>sp|SPIKE_CVCAK|SPIKE glycoprotein|Canine coronavirus (strain K378) (CCoV)
Query: 2 SCKEAFWD 9
+CK + WD
Sbjct: 585 TCKSSLWD 592
>sp|SPIKE_CVCAI|SPIKE glycoprotein|Canine coronavirus (strain Insavc-1) (CCoV)
Query: 2 SCKEAFWD 9
+CK + WD
Sbjct: 584 TCKSSLWD 591
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 ESCKEAFWDR 10
ESC E+F+ R
Sbjct: 650 ESCLESFFGR 659
>sp|ETFL_ASFM2|EARLY transcription factor large subunit|African swine fever virus
Query: 3 CKEAFWD 9
CK+ +WD
Sbjct: 973 CKDGWWD 979
>sp|ETFL_ASFK5|EARLY transcription factor large subunit|African swine fever virus
Query: 3 CKEAFWD 9
CK+ +WD
Sbjct: 973 CKDGWWD 979
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ESCKEAFWD 9
ESC + +WD
Sbjct: 211 ESCDKHYWD 219
>sp|SPIKE_CVCBG|SPIKE glycoprotein|Canine coronavirus (strain BGF10) (CCoV)
Query: 2 SCKEAFWD 9
+CK A WD
Sbjct: 585 NCKSASWD 592
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ESCKEAFWD 9
ESC + +WD
Sbjct: 212 ESCDKHYWD 220
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ESCKEAFWD 9
ESC + +WD
Sbjct: 201 ESCDKHYWD 209
>sp|SPIKE_CVPRM|SPIKE glycoprotein|Porcine respiratory coronavirus (strain RM4)
Query: 2 SCKEAFWD 9
+CK WD
Sbjct: 357 TCKSVLWD 364
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ESCKEAFWD 9
ESC + +WD
Sbjct: 212 ESCDKHYWD 220
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ESCKEAFWD 9
ESC + +WD
Sbjct: 204 ESCDKHYWD 212
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ESCKEAFWD 9
ESC + +WD
Sbjct: 211 ESCDKHYWD 219
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ESCKEAFWD 9
ESC + +WD
Sbjct: 211 ESCDKHYWD 219
>sp|ENV_SIVML|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate K78)
Query: 1 ESCKEAFWD 9
ESC + +WD
Sbjct: 220 ESCDKHYWD 228
>sp|ENV_SIVMK|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate K6W)
Query: 1 ESCKEAFWD 9
ESC + +WD
Sbjct: 220 ESCDKHYWD 228
>sp|ENV_SIVM2|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate Mm251)
Query: 1 ESCKEAFWD 9
ESC + +WD
Sbjct: 220 ESCDKHYWD 228
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ESCKEAFWD 9
ESC + +WD
Sbjct: 203 ESCDKHYWD 211
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ESCKEAFWD 9
ESC + +WD
Sbjct: 212 ESCDKHYWD 220
>sp|VF134_ASFWA|EARLY transcription factor large subunit|African swine fever virus
Query: 3 CKEAFWD 9
CK+ +WD
Sbjct: 973 CKDNWWD 979
>sp|ETFL_ASFB7|EARLY transcription factor large subunit|African swine fever virus
Query: 3 CKEAFWD 9
CK+ +WD
Sbjct: 973 CKDNWWD 979
>sp|EFTL_ASFP4|EARLY transcription factor large subunit|African swine fever virus
Query: 3 CKEAFWD 9
CK+ +WD
Sbjct: 973 CKDNWWD 979
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ESCKEAFWD 9
ESC + +WD
Sbjct: 206 ESCDKHYWD 214
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ESCKEAFWD 9
ESC + +WD
Sbjct: 203 ESCDKHYWD 211
>sp|ENV_SIVVT|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet
Query: 1 ESCKEAFWDR 10
E+C + +WD+
Sbjct: 216 EACDKTYWDQ 225
>sp|LTP_SHV21|LARGE tegument protein deneddylase|Saimiriine herpesvirus 2 (strain 11)
Query: 1 ESCKEAFWDR 10
E+ K+AF+D+
Sbjct: 894 ETIKQAFFDK 903
>sp|ENV_SIVSP|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate
Query: 1 ESCKEAFWD 9
ESC + +WD
Sbjct: 224 ESCDKHYWD 232
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ESCKEAFWD 9
ESC + +WD
Sbjct: 206 ESCDKHYWD 214
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ESCKEAFWD 9
ESC + +WD
Sbjct: 202 ESCDKHYWD 210
>sp|ENV_SIVS4|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate
Query: 1 ESCKEAFWD 9
ESC + +WD
Sbjct: 219 ESCDKHYWD 227
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 SCKEAFWD 9
+C + +WD
Sbjct: 2091 ACNDEYWD 2098
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 SCKEAFWD 9
+C + +WD
Sbjct: 2118 ACNDEYWD 2125
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 SCKEAFWD 9
+C + +WD
Sbjct: 2098 ACNDEYWD 2105
>sp|ENV_SIVG1|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.grivet
Query: 1 ESCKEAFWD 9
E+C + +WD
Sbjct: 205 EACDKTYWD 213
>sp|ENV_SIVV1|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet
Query: 1 ESCKEAFWD 9
E+C + +WD
Sbjct: 217 EACDKTYWD 225
>sp|ENV_SIVVG|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet
Query: 1 ESCKEAFWD 9
E+C + +WD
Sbjct: 222 EACDKTYWD 230
>sp|POL_CAMVN|ENZYMATIC polyprotein|Cauliflower mosaic virus (strain NY8153)
Query: 3 CKEAFW 8
CK FW
Sbjct: 342 CKSGFW 347
>sp|POL_CAMVD|ENZYMATIC polyprotein|Cauliflower mosaic virus (strain D/H)
Query: 3 CKEAFW 8
CK FW
Sbjct: 336 CKSGFW 341
>sp|POL_CAMVC|ENZYMATIC polyprotein|Cauliflower mosaic virus (strain CM-1841)
Query: 3 CKEAFW 8
CK FW
Sbjct: 341 CKSGFW 346
>sp|POL_CAMVS|ENZYMATIC polyprotein|Cauliflower mosaic virus (strain Strasbourg)
Query: 3 CKEAFW 8
CK FW
Sbjct: 341 CKSGFW 346
>sp|POL_CAMVE|ENZYMATIC polyprotein|Cauliflower mosaic virus (strain BBC)
Query: 3 CKEAFW 8
CK FW
Sbjct: 341 CKSGFW 346
>sp|POL_FMVD|ENZYMATIC polyprotein|Figwort mosaic virus (strain DxS)
Query: 3 CKEAFW 8
CK FW
Sbjct: 334 CKSGFW 339
52|Sequence|256|265|AFWDRCLSVI
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 WDRCLSVI 10
WDRC V+
Sbjct: 54 WDRCAQVL 61
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 WDRCLSVI 10
WDRC V+
Sbjct: 54 WDRCAQVL 61
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 WDRCLSVI 10
WDRC V+
Sbjct: 54 WDRCAQVL 61
>sp|RDRP_CGMVS|REPLICASE large subunit|Cucumber green mottle mosaic virus
Query: 2 FWDRCL 7
F+DRCL
Sbjct: 1174 FYDRCL 1179
>sp|YL020_MIMIV|UNCHARACTERIZED protein L20|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 AFWDRCLS 8
+FW RC++
Sbjct: 108 SFWYRCIT 115
>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 1 AFWDRCLSV 9
A WDR LSV
Sbjct: 1037 AQWDRKLSV 1045
>sp|SHUT_SUHVK|VIRION host shutoff protein|Suid herpesvirus 1 (strain Kaplan)
Query: 1 AFWDRC 6
A+WD C
Sbjct: 354 AYWDDC 359
>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 2 FWDRCL 7
FW RC+
Sbjct: 3097 FWSRCV 3102
>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 2 FWDRCL 7
FW RC+
Sbjct: 3097 FWSRCV 3102
>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 2 FWDRCL 7
FW RC+
Sbjct: 3099 FWSRCV 3104
>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain
Query: 2 FWDRCL 7
FW RC+
Sbjct: 3097 FWSRCV 3102
>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain
Query: 2 FWDRCL 7
FW RC+
Sbjct: 3097 FWSRCV 3102
>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain
Query: 2 FWDRCL 7
FW RC+
Sbjct: 3099 FWSRCV 3104
>sp|RPOTF_PRRSL|REPLICASE polyprotein 1TF|Porcine reproductive and respiratory syndrome
Query: 1 AFWDRCLSV 9
A WDR LSV
Sbjct: 1037 AQWDRKLSV 1045
>sp|MCP_GAHVM|MAJOR capsid protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 1 AFWDRCLSV 9
++WD C V
Sbjct: 670 SYWDNCKRV 678
53|Sequence|261|270|CLSVINLMSS
***** No hits found ******
54|Sequence|266|275|NLMSSKMLQI
***** No hits found ******
55|Sequence|271|280|KMLQINADPH
>sp|HEMA_I80AD|HEMAGGLUTININ A virus (strain A/Gull/Minnesota/945/1980
Query: 1 KMLQINADPH 10
K+L +N+DP+
Sbjct: 205 KLLYVNSDPY 214
>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 KMLQINADP 9
KM++IN DP
Sbjct: 467 KMIKINKDP 475
>sp|GP15_BPT7|INTERNAL virion protein gp15|Escherichia phage T7 (Bacteriophage T7)
Query: 2 MLQINADP 9
M+Q+N+DP
Sbjct: 625 MMQVNSDP 632
>sp|MVP_PVMA|P3N-PIPO polyprotein|Potato virus A (PVA)
Query: 1 KMLQINADPH 10
K+L++N PH
Sbjct: 12 KILEVNCKPH 21
>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)
Query: 1 KMLQINADPH 10
K+L++N PH
Sbjct: 12 KILEVNCKPH 21
>sp|SPIK1_ADEG1|FIBER protein 1|Fowl adenovirus A serotype 1
Query: 3 LQINADPH 10
L INADP
Sbjct: 45 LSINADPQ 52
>sp|TGB1_PCV87|MOVEMENT protein TGB1|Peanut clump virus (isolate 87/TGTA2)
Query: 1 KMLQINADP 9
K+L I ADP
Sbjct: 407 KLLSIRADP 415
>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)
Query: 2 MLQINADP 9
+LQ++ADP
Sbjct: 565 LLQLDADP 572
>sp|YR841_MIMIV|PUTATIVE ankyrin repeat protein R841|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 MLQINADPH 10
MLQ N DP+
Sbjct: 454 MLQYNIDPN 462
56|Sequence|276|285|NADPHYFTQV
>sp|YL126_MIMIV|PUTATIVE F-box protein L126|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 NADPHYFTQV 10
N DP+YF ++
Sbjct: 138 NEDPYYFYRI 147
>sp|YL520_MIMIV|PUTATIVE BTB/POZ domain-containing protein L520|Acanthamoeba polyphaga
Query: 1 NADPHYFTQV 10
+ DPHYF+++
Sbjct: 243 DKDPHYFSKI 252
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 NADPHYFT 8
N PHYFT
Sbjct: 281 NTPPHYFT 288
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 1 NADPHYFT 8
N PHYFT
Sbjct: 281 NTPPHYFT 288
>sp|CAP3_ADECR|PRE-HEXON-LINKING protein IIIa|Canine adenovirus serotype 1 (strain
Query: 4 PHYFTQ 9
PHYF Q
Sbjct: 195 PHYFLQ 200
>sp|CAP3_ADECC|PRE-HEXON-LINKING protein IIIa|Canine adenovirus serotype 1 (strain
Query: 4 PHYFTQ 9
PHYF Q
Sbjct: 195 PHYFLQ 200
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 NADPH 5
NADPH
Sbjct: 518 NADPH 522
>sp|GC_SUHVF|ENVELOPE glycoprotein C homolog|Suid herpesvirus 1 (strain
Query: 1 NADPHYFTQ 9
+ADP YF +
Sbjct: 144 DADPEYFDE 152
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 NADPH 5
NADPH
Sbjct: 517 NADPH 521
57|Sequence|281|290|YFTQVFSDLK
>sp|A47_VACCW|PROTEIN A47|Vaccinia virus (strain Western Reserve)
Query: 1 YFTQVFSDL 9
Y T +FSDL
Sbjct: 198 YLTPIFSDL 206
>sp|A47_VACCA|PROTEIN A47|Vaccinia virus (strain Ankara) (VACV)
Query: 1 YFTQVFSDL 9
Y T +FSDL
Sbjct: 184 YLTPIFSDL 192
>sp|A47_VACCC|PROTEIN A47|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YFTQVFSDL 9
Y T +FSDL
Sbjct: 198 YLTPIFSDL 206
>sp|A47_VARV|PROTEIN A47|Variola virus
Query: 1 YFTQVFSDL 9
Y T +FSDL
Sbjct: 198 YLTPIFSDL 206
>sp|A47_VAR67|PROTEIN A47|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 YFTQVFSDL 9
Y T +FSDL
Sbjct: 198 YLTPIFSDL 206
>sp|PRIM_ALHV1|DNA primase|Alcelaphine herpesvirus 1 (strain C500)
Query: 1 YFTQVFSD 8
YF VFSD
Sbjct: 425 YFLAVFSD 432
58|Sequence|286|295|FSDLKNESGQ
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 SDLKNES 8
SDLKNES
Sbjct: 524 SDLKNES 530
>sp|YL451_MIMIV|UNCHARACTERIZED protein L451|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 DLKNESG 9
DL+NESG
Sbjct: 337 DLQNESG 343
>sp|NSP1_ROTSH|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Monkey/South
Query: 1 FSDLKNESGQ 10
+SDLKN+ +
Sbjct: 263 YSDLKNDKNK 272
>sp|NSP1_ROTS4|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/SA11-4F/G3P6[1]) (RV-A)
Query: 1 FSDLKNESGQ 10
+SDLKN+ +
Sbjct: 263 YSDLKNDKNK 272
>sp|NSP1_ROTS1|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A)
Query: 1 FSDLKNESGQ 10
+SDLKN+ +
Sbjct: 262 YSDLKNDKNK 271
>sp|NSP1_ROTSF|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/SA11-FEM/G3P6[1]) (RV-A)
Query: 1 FSDLKNESGQ 10
+SDLKN+ +
Sbjct: 263 YSDLKNDKNK 272
59|Sequence|291|300|NESGQEDKKR
>sp|RPB1_IIV6|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 6
Query: 1 NESGQEDK 8
NESGQE K
Sbjct: 444 NESGQEIK 451
60|Sequence|296|307|EDKKRLLLGLDR
>sp|RDRP_HASV|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Helicoverpa armigera stunt virus (HaSV)
Query: 1 EDKKRLLLGLDR 12
ED KR+L LDR
Sbjct: 994 EDVKRMLNSLDR 1005
>sp|POLG_RHDVS|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 1 EDKKRLLLGLD 11
E KKRLL G D
Sbjct: 1435 EGKKRLLWGCD 1445
>sp|POLG_RHDVF|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 1 EDKKRLLLGLD 11
E KKRLL G D
Sbjct: 1435 EGKKRLLWGCD 1445
>sp|POLG_RHDVB|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 1 EDKKRLLLGLD 11
E KKRLL G D
Sbjct: 1435 EGKKRLLWGCD 1445
>sp|POLG_RHDVA|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 1 EDKKRLLLGLD 11
E KKRLL G D
Sbjct: 1435 EGKKRLLWGCD 1445
>sp|POLG_RHDV3|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 1 EDKKRLLLGLD 11
E KKRLL G D
Sbjct: 1435 EGKKRLLWGCD 1445
>sp|YORT_TTV1K|UNCHARACTERIZED 38.7 kDa protein|Thermoproteus tenax virus 1 (strain
Query: 4 KRLLLGLDR 12
K++LLGLD+
Sbjct: 32 KKILLGLDK 40
>sp|POLG_PESV|GENOME polyprotein|Porcine enteric sapovirus (isolate Swine/United
Query: 1 EDKKRLLLGLD 11
+ KKRLL G D
Sbjct: 1376 QGKKRLLWGCD 1386
>sp|YL087_MIMIV|UNCHARACTERIZED protein L87|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 EDKKRLLLGLD 11
+DKK+L +G+D
Sbjct: 104 KDKKQLDIGID 114
>sp|NCAP_TOSV|NUCLEOPROTEIN virus (Tos)
Query: 1 EDKKRLLLGL 10
EDKK+LL+ +
Sbjct: 218 EDKKKLLIAV 227
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 KKRLLLGLD 11
+KRLLL LD
Sbjct: 2288 EKRLLLKLD 2296
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 KKRLLLGLD 11
+KRLLL LD
Sbjct: 2288 EKRLLLKLD 2296
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 KKRLLLGLD 11
+KRLLL LD
Sbjct: 2288 EKRLLLKLD 2296
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 KKRLLLGLD 11
+KRLLL LD
Sbjct: 2288 EKRLLLKLD 2296
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 KKRLLLGLD 11
KKRLL G D
Sbjct: 1459 KKRLLWGAD 1467
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 KKRLLLGLD 11
KKRLL G D
Sbjct: 1460 KKRLLWGAD 1468
>sp|POLG_BECNB|GENOME polyprotein|Bovine enteric calicivirus NB (isolate
Query: 1 EDKKRLLLGLD 11
E K+RL+ G D
Sbjct: 1319 EGKRRLIWGAD 1329
>sp|POLG_BECN1|GENOME polyprotein|Bovine enteric calicivirus Newbury agent-1
Query: 1 EDKKRLLLGLD 11
E K+RL+ G D
Sbjct: 1319 EGKRRLIWGAD 1329
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 EDKKRLLLGL 10
ED+K+ +LG+
Sbjct: 473 EDRKQAMLGV 482