1|SequenceR|10|1|LLLARALAGM
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 3 LARALAG 9
LAR LAG
Sbjct: 232 LARGLAG 238
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 LLARALAGM 10
+L RALAG+
Sbjct: 543 VLLRALAGV 551
2|SequenceR|15|6|QALLPLLLAR
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 QALLPLLLAR 10
+A LP LLAR
Sbjct: 136 KAFLPTLLAR 145
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 QALLPLLLAR 10
+A LP LLAR
Sbjct: 205 KAFLPTLLAR 214
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 QALLPLLLAR 10
QALLP LLA
Sbjct: 1122 QALLPRLLAH 1131
>sp|VP2_POVBA|MINOR capsid protein VP2|BK polyomavirus (strain AS) (BKPyV)
Query: 1 QALLPLLLA 9
Q +LPLLL
Sbjct: 292 QWMLPLLLG 300
>sp|VP2_POVBK|MINOR capsid protein VP2|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 QALLPLLLA 9
Q +LPLLL
Sbjct: 292 QWMLPLLLG 300
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 2 ALLPLLLAR 10
A LP LLAR
Sbjct: 206 AFLPKLLAR 214
3|SequenceR|20|11|ARLLWQALLP
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 2 RLLWQALLP 10
R LW L P
Sbjct: 547 RALWSGLFP 555
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 RLLWQALLP 10
R LW L P
Sbjct: 547 RALWSGLFP 555
>sp|LANA1_HHV8P|PROTEIN LANA1|Human herpesvirus 8 type P
Query: 1 ARLLWQALLP 10
ARL W+A P
Sbjct: 1085 ARLAWEASHP 1094
>sp|VE6_HPV49|PROTEIN E6|Human papillomavirus type 49
Query: 4 LWQALLP 10
+W+ LLP
Sbjct: 18 IWEVLLP 24
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 2 RLLWQALLP 10
RLL+ +L+P
Sbjct: 82 RLLFNSLVP 90
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 2 RLLWQALLP 10
RLL+ +L+P
Sbjct: 82 RLLFNSLVP 90
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 2 RLLWQALL 9
RL+W+ L
Sbjct: 715 RLIWEQLF 722
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 2 RLLWQALL 9
RL+W+ L
Sbjct: 715 RLIWEQLF 722
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RLLWQAL 8
RLLW +L
Sbjct: 524 RLLWHSL 530
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RLLWQAL 8
RLLW +L
Sbjct: 524 RLLWHSL 530
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 ARLLWQALLP 10
A L+W +LP
Sbjct: 87 AILIWPRILP 96
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 ARLLWQALLP 10
A L+W +LP
Sbjct: 87 AILIWPRILP 96
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 ARLLWQALLP 10
A L+W +LP
Sbjct: 87 AILIWPRILP 96
4|SequenceR|25|16|ALEPAARLLW
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 ALEPAARLLW 10
A+E +RLLW
Sbjct: 1244 AIEMVSRLLW 1253
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 ALEPAARLLW 10
A+E +RLLW
Sbjct: 1244 AIEMVSRLLW 1253
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 ALEPAARLLW 10
A+E +RLLW
Sbjct: 1244 AIEMVSRLLW 1253
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 ALEPAARLLW 10
A+E +RLLW
Sbjct: 1244 AIEMVSRLLW 1253
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 ALEPAARLLW 10
A+E +RLLW
Sbjct: 1244 AIEMVSRLLW 1253
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 ALEPAARLLW 10
A+E A+RL W
Sbjct: 1217 AIELASRLTW 1226
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 ALEPAARLLW 10
A+E A+RL W
Sbjct: 1217 AIELASRLTW 1226
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 ALEPAARLLW 10
A+E A+RL W
Sbjct: 1219 AIELASRLTW 1228
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 ALEPAARLLW 10
A+E A+RL W
Sbjct: 1219 AIELASRLTW 1228
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 2 LEPAAR 7
LEPAAR
Sbjct: 342 LEPAAR 347
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LEPAAR 7
LEPAAR
Sbjct: 342 LEPAAR 347
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ALEPAARLLW 10
A PA R LW
Sbjct: 460 AHSPATRELW 469
>sp|UL79_HHV6Z|PROTEIN U52|Human herpesvirus 6B (strain Z29)
Query: 3 EPAARLL 9
EPA RL+
Sbjct: 178 EPAVRLI 184
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ALEPAARLLW 10
A PA R LW
Sbjct: 460 AHSPATRELW 469
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 ALEPAARLLW 10
A+E +RL W
Sbjct: 1218 AIELTSRLTW 1227
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 ALEPAARLLW 10
A+E +RL W
Sbjct: 1218 AIELTSRLTW 1227
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 2 LEPAARL 8
L+PAARL
Sbjct: 441 LDPAARL 447
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 4 PAARLLW 10
PAA L W
Sbjct: 298 PAAALYW 304
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 LEPAARLLW 10
L+PAA +W
Sbjct: 1747 LKPAATSMW 1755
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 2 LEPAAR 7
LEPAAR
Sbjct: 681 LEPAAR 686
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 ALEPAARLLW 10
L+PAA +W
Sbjct: 1746 TLKPAATSMW 1755
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 PAARLL 9
PAARLL
Sbjct: 2986 PAARLL 2991
5|SequenceR|30|21|TFPAPALEPA
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 FPAPALEPA 10
FP PA +PA
Sbjct: 750 FPLPAPKPA 758
>sp|E3B14_ADE05|EARLY E3B 14.6 kDa protein|Human adenovirus C serotype 5
Query: 1 TFPAPALEP 9
TFPAPA+ P
Sbjct: 89 TFPAPAMLP 97
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 4 APALEPA 10
APALEPA
Sbjct: 1697 APALEPA 1703
Query: 1 TFPAPALEP 9
T+PAP P
Sbjct: 1964 TYPAPVYSP 1972
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 TFPAPALEPA 10
T+PAP P+
Sbjct: 2003 TYPAPVYSPS 2012
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 TFPAPALEPA 10
T+PAP P+
Sbjct: 2003 TYPAPVYSPS 2012
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 3 PAPALEP 9
P P++EP
Sbjct: 631 PTPSVEP 637
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 3 PAPALEP 9
P P++EP
Sbjct: 631 PTPSVEP 637
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 3 PAPALEP 9
P P++EP
Sbjct: 631 PTPSVEP 637
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 3 PAPALEP 9
P P++EP
Sbjct: 631 PTPSVEP 637
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 1 TFPAPALEPA 10
TF PA EPA
Sbjct: 252 TFDNPAFEPA 261
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 TFPAPALEP 9
T+PAP P
Sbjct: 1964 TYPAPVYSP 1972
>sp|BVLF1_EBVB9|LATE gene expression regulator BVLF1|Epstein-Barr virus (strain B95-8)
Query: 2 FPAPALEPA 10
FPA AL P
Sbjct: 95 FPAEALRPG 103
>sp|VL2_HPV70|MINOR capsid protein L2|Human papillomavirus type 70
Query: 1 TFPAPALEPA 10
TF PA EP
Sbjct: 250 TFDNPAFEPG 259
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 PAPALEP 9
P P LEP
Sbjct: 1843 PPPTLEP 1849
>sp|VL2_HPV28|MINOR capsid protein L2|Human papillomavirus 28
Query: 1 TFPAPALEPA 10
TF PA EP
Sbjct: 251 TFDNPAFEPG 260
>sp|VL2_HPVME|MINOR capsid protein L2|Human papillomavirus type ME180
Query: 1 TFPAPALEPA 10
TF PA EP
Sbjct: 250 TFDNPAFEPV 259
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TFPAPALEP 9
T P+P EP
Sbjct: 623 TLPSPWQEP 631
>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 TFPAPALEP 9
+FP P L P
Sbjct: 132 SFPDPGLRP 140
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 2 FPAPALE 8
P+PALE
Sbjct: 151 LPSPALE 157
>sp|TAX_HTL1L|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 TFPAPALEP 9
+FP P L P
Sbjct: 131 SFPDPGLRP 139
>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 TFPAPALEP 9
+FP P L P
Sbjct: 132 SFPDPGLRP 140
>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 TFPAPALEP 9
+FP P L P
Sbjct: 132 SFPDPGLRP 140
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 TFPAPALEP 9
+FP P L P
Sbjct: 132 SFPDPGLRP 140
>sp|TAX_HTL32|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 TFPAPALEP 9
+FP P L P
Sbjct: 132 SFPDPGLRP 140
6|SequenceR|35|26|VRLPLTFPAP
>sp|VU3_HHV7J|PROTEIN U3|Human herpesvirus 7 (strain JI)
Query: 1 VRLPLTFP 8
+R+PL FP
Sbjct: 92 LRVPLVFP 99
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 RLPLTFP 8
R+PL FP
Sbjct: 632 RVPLEFP 638
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 4 PLTFP 8
PLTFP
Sbjct: 322 PLTFP 326
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 VRLPLTFPAP 10
+R P+ FPAP
Sbjct: 472 LRFPVPFPAP 481
>sp|NEF_HV1JR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
VR PLTF
Sbjct: 143 VRFPLTF 149
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 3 LPLTFPAP 10
+P+TFP P
Sbjct: 1005 IPVTFPTP 1012
>sp|NEF_HV1S3|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
VR PLTF
Sbjct: 132 VRFPLTF 138
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 5 LTFPAP 10
LTFP P
Sbjct: 584 LTFPNP 589
>sp|NEF_HV19N|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 RLPLTF 7
RLPLTF
Sbjct: 135 RLPLTF 140
>sp|NEF_HV192|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
VR PLTF
Sbjct: 133 VRFPLTF 139
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 VRLPLTFPAP 10
+R P+T P P
Sbjct: 375 LRPPITKPGP 384
>sp|NEF_HV1BN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
VR PLTF
Sbjct: 145 VRYPLTF 151
>sp|NEF_HV1B8|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
VR PLTF
Sbjct: 133 VRYPLTF 139
>sp|NEF_HV1A2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
+R PLTF
Sbjct: 137 IRYPLTF 143
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 PLTFPA 9
PL FPA
Sbjct: 137 PLVFPA 142
>sp|NEF_HV1LA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
VR PLTF
Sbjct: 133 VRYPLTF 139
>sp|NEF_HV1S1|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
+R PLTF
Sbjct: 135 IRYPLTF 141
>sp|NEF_HV1B9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
+R PLTF
Sbjct: 134 IRYPLTF 140
>sp|NCAP_MERS1|NUCLEOPROTEIN East respiratory syndrome-related coronavirus
Query: 2 RLPLTFP 8
++PLTFP
Sbjct: 52 KVPLTFP 58
>sp|NEF_HV1BR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
VR PLTF
Sbjct: 133 VRYPLTF 139
>sp|NEF_HV1H2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
VR PLTF
Sbjct: 133 VRYPLTF 139
>sp|NEF_HV197|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
+R PLTF
Sbjct: 133 IRYPLTF 139
>sp|NEF_HV1MN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
+R PLTF
Sbjct: 135 IRYPLTF 141
>sp|US25_HCMVA|UNCHARACTERIZED protein US25|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RLPLTFPAP 10
R PL PAP
Sbjct: 91 RFPLRHPAP 99
>sp|NEF_HV1EL|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
+R PLTF
Sbjct: 134 IRYPLTF 140
>sp|NEF_HV1S2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
+R PLTF
Sbjct: 130 IRYPLTF 136
>sp|NEF_HV190|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 RLPLTF 7
R PLTF
Sbjct: 135 RFPLTF 140
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 VRLPLTFPAP 10
+R P+ FP P
Sbjct: 469 LRFPIPFPTP 478
>sp|NEF_HV1U4|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
+R PLTF
Sbjct: 133 IRYPLTF 139
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 2 RLPLTFPAP 10
RLPL P P
Sbjct: 507 RLPLQIPIP 515
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 RLPLTFPAP 10
RLPL P P
Sbjct: 502 RLPLQIPIP 510
>sp|NEF_HV1Z6|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
+R PLTF
Sbjct: 139 IRYPLTF 145
>sp|NEF_HV1ND|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
+R PLTF
Sbjct: 134 IRYPLTF 140
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 RLPLTFPAP 10
RLPL P P
Sbjct: 497 RLPLQIPIP 505
>sp|NEF_HV196|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
+R PLTF
Sbjct: 142 IRYPLTF 148
>sp|NEF_HV1LW|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
+R PLTF
Sbjct: 133 IRYPLTF 139
>sp|NEF_HV1B1|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
+R PLTF
Sbjct: 133 IRYPLTF 139
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 RLPLTF 7
+LPLTF
Sbjct: 1782 KLPLTF 1787
>sp|NEF_HV1ET|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
VR PLTF
Sbjct: 134 VRYPLTF 140
>sp|NEF_HV112|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
+R PLTF
Sbjct: 133 IRYPLTF 139
>sp|NEF_HV1M2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 RLPLTF 7
R PLTF
Sbjct: 129 RFPLTF 134
>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)
Query: 1 VRLPLT 6
+RLPLT
Sbjct: 117 IRLPLT 122
>sp|NEF_HV1H3|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
+R PLTF
Sbjct: 133 IRYPLTF 139
>sp|NEF_HV1SE|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 RLPLTF 7
R PLTF
Sbjct: 135 RFPLTF 140
>sp|NEF_HV1MA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VRLPLTF 7
+R PLTF
Sbjct: 136 IRFPLTF 142
7|SequenceR|40|31|NTAAAVRLPL
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NTAAAVRL 8
N AAAVR+
Sbjct: 538 NQAAAVRI 545
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NTAAAVRL 8
N AAAVR+
Sbjct: 538 NQAAAVRI 545
8|SequenceR|45|36|PAVVRNTAAA
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 1 PAVVRNTAAA 10
P +RNTAAA
Sbjct: 263 PPKLRNTAAA 272
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 PAVVRNTAAA 10
P +RNTAAA
Sbjct: 265 PPKLRNTAAA 274
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 1 PAVVRNTAAA 10
P +RNTAAA
Sbjct: 264 PPKLRNTAAA 273
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 1 PAVVRNTAAA 10
P +RNTAAA
Sbjct: 263 PPKLRNTAAA 272
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 1 PAVVRNTAAA 10
P +RNTAAA
Sbjct: 263 PPKLRNTAAA 272
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 1 PAVVRNTAAA 10
P +RNTAAA
Sbjct: 263 PPKLRNTAAA 272
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 PAVVRNTAAA 10
P +RNTAAA
Sbjct: 265 PPKLRNTAAA 274
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 1 PAVVRNTAAA 10
P +RN AAA
Sbjct: 263 PPKLRNVAAA 272
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 1 PAVVRNTAAA 10
P +RN AAA
Sbjct: 262 PPKLRNVAAA 271
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 1 PAVVRNTAAA 10
P +RN AAA
Sbjct: 264 PPKLRNVAAA 273
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 1 PAVVRNTAAA 10
P +RN AAA
Sbjct: 264 PPKLRNVAAA 273
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 1 PAVVRNTAAA 10
P +R+TAAA
Sbjct: 289 PPKLRSTAAA 298
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 1 PAVVRNTAAA 10
P +R+TAAA
Sbjct: 309 PPKLRSTAAA 318
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 1 PAVVRNTAAA 10
P +R+TAAA
Sbjct: 262 PPKLRHTAAA 271
>sp|CEP2_HHV7J|CYTOPLASMIC envelopment protein 2|Human herpesvirus 7 (strain JI)
Query: 1 PAVVRNT 7
P V+RNT
Sbjct: 296 PVVLRNT 302
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 PAVVRN 6
PAV+RN
Sbjct: 1769 PAVLRN 1774
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 PAVVRN 6
PAV+RN
Sbjct: 1773 PAVLRN 1778
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 PAVVRN 6
PAV+RN
Sbjct: 1761 PAVLRN 1766
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 PAVVRN 6
PAV+RN
Sbjct: 1781 PAVLRN 1786
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 PAVVRN 6
PAV+RN
Sbjct: 1771 PAVLRN 1776
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 PAVVRN 6
PAV+RN
Sbjct: 1761 PAVLRN 1766
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 PAVVRN 6
PAV+RN
Sbjct: 1779 PAVLRN 1784
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 PAVVRN 6
PAV+RN
Sbjct: 1763 PAVLRN 1768
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 PAVVRN 6
PAV+RN
Sbjct: 1765 PAVLRN 1770
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 PAVVRN 6
PAV+RN
Sbjct: 1760 PAVLRN 1765
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 PAVVRN 6
PAV+RN
Sbjct: 1763 PAVLRN 1768
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 PAVVRN 6
PAV+RN
Sbjct: 1772 PAVLRN 1777
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 PAVVRN 6
PAV+RN
Sbjct: 1771 PAVLRN 1776
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 PAVVRN 6
PAV+RN
Sbjct: 1762 PAVLRN 1767
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 PAVVRN 6
PAV+RN
Sbjct: 1762 PAVLRN 1767
9|SequenceR|50|41|GPGPTPAVVR
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 4 PTPAVVR 10
PTPAV++
Sbjct: 421 PTPAVIQ 427
>sp|UL20_VZVD|PROTEIN UL20 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GPTPAVV 9
GP+PAV+
Sbjct: 198 GPSPAVL 204
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 2 PGPTPAV 8
PGP P +
Sbjct: 226 PGPRPQI 232
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 2 PGPTPAV 8
PGP P +
Sbjct: 226 PGPRPQI 232
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 2 PGPTPAV 8
PGP P +
Sbjct: 226 PGPRPQI 232
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 2 PGPTPAV 8
PGP P +
Sbjct: 226 PGPRPQI 232
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 2 PGPTPAV 8
PGP P +
Sbjct: 226 PGPRPQI 232
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 2 PGPTPAV 8
PGP P +
Sbjct: 226 PGPRPQI 232
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 2 PGPTPAV 8
PGP P +
Sbjct: 226 PGPRPQI 232
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 2 PGPTPAV 8
PGP P +
Sbjct: 226 PGPRPQI 232
>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65
Query: 1 GPGPTPA 7
GPG TP+
Sbjct: 267 GPGETPS 273
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 GPGPTPAVVR 10
P PTP V+R
Sbjct: 454 SPTPTPRVLR 463
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 GPGPTPAVVR 10
P PTP V+R
Sbjct: 1785 SPTPTPRVLR 1794
>sp|PHOSP_VSNJM|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 2 PGPTP 6
PGP P
Sbjct: 194 PGPAP 198
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PGPTPA 7
PGP PA
Sbjct: 216 PGPMPA 221
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PGPTPA 7
PGP PA
Sbjct: 216 PGPMPA 221
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 GPGPTPAVVR 10
G GPTP R
Sbjct: 230 GAGPTPGYTR 239
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 GPGPTPAVVR 10
G GPTP R
Sbjct: 230 GAGPTPGYTR 239
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 GPGPTPAVVR 10
G GPTP R
Sbjct: 230 GAGPTPGYTR 239
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 GPGPTPAVVR 10
G GPTP R
Sbjct: 230 GAGPTPGYTR 239
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 GPGPTPAVVR 10
G GPTP R
Sbjct: 230 GAGPTPGYTR 239
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 GPGPTPAVVR 10
G GPTP R
Sbjct: 230 GAGPTPGYTR 239
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 GPGPTPAVVR 10
G GPTP R
Sbjct: 230 GAGPTPGYTR 239
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 GPGPTPAVVR 10
G GPTP R
Sbjct: 230 GAGPTPGYTR 239
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 GPGPTPAVVR 10
G GP +V+R
Sbjct: 2076 GLGPLSSVIR 2085
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 GPGPTPAVVR 10
G GP +V+R
Sbjct: 2076 GLGPLSSVIR 2085
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 2 PGPTPAVVR 10
P PTPA R
Sbjct: 625 PSPTPADFR 633
>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24
Query: 3 GPTPAVVR 10
G TP VVR
Sbjct: 81 GSTPTVVR 88
>sp|VL2_HPV32|MINOR capsid protein L2|Human papillomavirus type 32
Query: 1 GPGPTPAVV 9
GP TPAV+
Sbjct: 137 GPSSTPAVL 145
>sp|VL2_HPV22|MINOR capsid protein L2|Human papillomavirus 22
Query: 3 GPTPAVVR 10
G TP VVR
Sbjct: 81 GATPTVVR 88
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 GPGPTP 6
GP P P
Sbjct: 792 GPNPVP 797
>sp|VL2_HPV42|MINOR capsid protein L2|Human papillomavirus 42
Query: 1 GPGPTPAVV 9
GP TPA++
Sbjct: 137 GPASTPAIL 145
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 GPGPTP 6
GP PTP
Sbjct: 2784 GPAPTP 2789
10|SequenceR|55|46|REAPTGPGPT
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 EAPTGPG 8
EAPT PG
Sbjct: 524 EAPTSPG 530
Query: 4 PTGPGPT 10
PT P P+
Sbjct: 26 PTSPAPS 32
>sp|DYR_HHV8P|PUTATIVE Dihydrofolate reductase|Human herpesvirus 8 type P
Query: 1 REAPTGPGPT 10
REA TGP P
Sbjct: 122 REALTGPWPV 131
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 EAPTGPG 8
EAPT PG
Sbjct: 524 EAPTSPG 530
Query: 4 PTGPGPT 10
PT P P+
Sbjct: 26 PTSPAPS 32
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 3 APTGPGPT 10
APTG PT
Sbjct: 299 APTGSSPT 306
>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain
Query: 4 PTGPGP 9
P GPGP
Sbjct: 94 PFGPGP 99
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 4 PTGPGP 9
P GPGP
Sbjct: 200 PRGPGP 205
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 2 EAPTGPGPT 10
E P PG T
Sbjct: 113 EMPKSPGET 121
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 4 PTGPGP 9
P GPGP
Sbjct: 94 PFGPGP 99
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 REAPTGPGPT 10
REA +G G T
Sbjct: 431 REAMSGTGTT 440
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 EAPTGP 7
E+PTGP
Sbjct: 330 ESPTGP 335
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 EAPTGP 7
E+PTGP
Sbjct: 330 ESPTGP 335
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 REAPTGPGPT 10
REA +G G T
Sbjct: 431 REAMSGTGTT 440
>sp|SCP_HCMVM|SMALL capsomere-interacting protein|Human cytomegalovirus (strain
Query: 5 TGPGPT 10
T PGPT
Sbjct: 4 TAPGPT 9
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 EAPTGP 7
E+PTGP
Sbjct: 330 ESPTGP 335
>sp|SCP_HCMVA|SMALL capsomere-interacting protein|Human cytomegalovirus (strain
Query: 5 TGPGPT 10
T PGPT
Sbjct: 4 TAPGPT 9
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 EAPTGP 7
+ PTGP
Sbjct: 3898 DTPTGP 3903
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 EAPTGP 7
+ PTGP
Sbjct: 3898 DTPTGP 3903
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 2 EAPTGPG 8
+APT PG
Sbjct: 45 KAPTKPG 51
Query: 1 REAPTGPGPT 10
R P+G PT
Sbjct: 774 RAPPSGGAPT 783
>sp|HBSAG_HBVC8|LARGE envelope protein|Hepatitis B virus genotype C
Query: 2 EAPTGPG 8
EAPT PG
Sbjct: 207 EAPTCPG 213
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 4 PTGPGPT 10
P GP PT
Sbjct: 717 PGGPVPT 723
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 PTGPGPT 10
P+G GPT
Sbjct: 259 PSGSGPT 265
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 1 REAPTGPGPT 10
R APT PT
Sbjct: 486 RSAPTKQSPT 495
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 4 PTGPGPT 10
PTG GPT
Sbjct: 44 PTGRGPT 50
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 4 PTGPGPT 10
P GP PT
Sbjct: 717 PGGPVPT 723
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 4 PTGPGPT 10
PTG GPT
Sbjct: 44 PTGRGPT 50
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 PTGPGPT 10
P+G GPT
Sbjct: 259 PSGSGPT 265
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 4 PTGPGPT 10
P+G GPT
Sbjct: 259 PSGSGPT 265
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 4 PTGPGPT 10
P GP PT
Sbjct: 715 PGGPVPT 721
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 4 PTGPGPT 10
P GP PT
Sbjct: 716 PGGPVPT 722
11|SequenceR|60|51|LGDAHREAPT
>sp|E1A_ADE04|EARLY E1A protein|Human adenovirus E serotype 4
Query: 1 LGDAHREAPT 10
+GD H E PT
Sbjct: 29 MGDDHPEPPT 38
>sp|TRX2_HHV8P|TRIPLEX capsid protein 2|Human herpesvirus 8 type P
Query: 1 LGDAHR 6
LGD HR
Sbjct: 33 LGDCHR 38
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 1 LGDAHREA 8
LGD H++A
Sbjct: 507 LGDNHKKA 514
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 2 GDAHRE 7
GDAHR
Sbjct: 521 GDAHRR 526
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 2 GDAHR 6
GDAHR
Sbjct: 521 GDAHR 525
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LGDAHR 6
LGD HR
Sbjct: 192 LGDLHR 197
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LGDAHR 6
LGD HR
Sbjct: 192 LGDLHR 197
12|SequenceR|65|56|ELALALGDAH
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 LALALGDAH 10
LALA GDA+
Sbjct: 853 LALAEGDAN 861
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 LALALGDAH 10
LALA GDA+
Sbjct: 853 LALAEGDAN 861
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 ELALALGD 8
+LAL +GD
Sbjct: 279 DLALLMGD 286
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 ELALALGD 8
+LAL +GD
Sbjct: 279 DLALLMGD 286
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 ELALALGD 8
+LAL +GD
Sbjct: 279 DLALLMGD 286
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 2 LALALGDA 9
LAL +GDA
Sbjct: 625 LALVVGDA 632
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 2 LALALGDA 9
LAL +GDA
Sbjct: 625 LALVVGDA 632
13|SequenceR|70|61|SALAPELALA
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 2 ALAPELAL 9
ALAPE+ L
Sbjct: 273 ALAPEIVL 280
>sp|CORE5_ADE02|CORE-CAPSID bridging protein|Human adenovirus C serotype 2
Query: 1 SALAPELAL 9
SAL PE AL
Sbjct: 291 SALLPEYAL 299
14|SequenceR|75|66|AAGAPSALAP
>sp|VP2_POVBK|MINOR capsid protein VP2|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 2 AGAPSALA 9
AGAP A+A
Sbjct: 72 AGAPGAIA 79
>sp|VP2_POVBA|MINOR capsid protein VP2|BK polyomavirus (strain AS) (BKPyV)
Query: 2 AGAPSALA 9
AGAP A+A
Sbjct: 72 AGAPGAIA 79
15|SequenceR|80|71|MALFNAAGAP
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 MALFNAAGA 9
MALF AG+
Sbjct: 391 MALFQPAGS 399
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 FNAAGAP 10
FNA+G P
Sbjct: 447 FNASGCP 453
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 3 LFNAAGA 9
LFN AGA
Sbjct: 257 LFNRAGA 263
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 FNAAGAP 10
FNA+G P
Sbjct: 447 FNASGCP 453
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 FNAAGAP 10
FNA+G P
Sbjct: 447 FNASGCP 453
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 3 LFNAAGA 9
LFN AGA
Sbjct: 260 LFNRAGA 266
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 MALFNAAGAP 10
++LFN G P
Sbjct: 1216 VSLFNLHGEP 1225
>sp|U131A_HCMVM|PROTEIN UL131A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 FNAAGA 9
FNAAG+
Sbjct: 107 FNAAGS 112
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 MALFNAAGAP 10
++LFN G P
Sbjct: 1239 VSLFNLYGEP 1248
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 MALFNAAGAP 10
++LFN G P
Sbjct: 1239 VSLFNLYGEP 1248
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 4 FNAAGAP 10
FNA+G P
Sbjct: 447 FNASGCP 453
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 MALFNAAGA 9
++ FN AGA
Sbjct: 126 LSTFNPAGA 134
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 MALFNAAGA 9
++ FN AGA
Sbjct: 126 LSTFNPAGA 134
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 4 FNAAGAP 10
FN++G P
Sbjct: 447 FNSSGCP 453
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 4 FNAAGAP 10
FNA+G P
Sbjct: 448 FNASGCP 454
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 4 FNAAGAP 10
FNA+G P
Sbjct: 448 FNASGCP 454
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 4 FNAAGAP 10
FNA G P
Sbjct: 446 FNATGCP 452
16|SequenceR|85|76|QLNDVMALFN
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 2 LNDVMALF 9
L DV ALF
Sbjct: 605 LTDVAALF 612
>sp|NEC1_HHV6Z|NUCLEAR egress protein 1|Human herpesvirus 6B (strain Z29)
Query: 1 QLNDVMALFN 10
+L+D+ A+FN
Sbjct: 37 KLHDLHAVFN 46
>sp|NEC1_HHV6H|NUCLEAR egress protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 1 QLNDVMALFN 10
+L+D+ A+FN
Sbjct: 37 KLHDLHAVFN 46
17|SequenceR|90|81|RGSDGQLNDV
>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate
Query: 3 SDGQLND 9
SDG LND
Sbjct: 94 SDGHLND 100
>sp|VP7_ROTHC|OUTER capsid glycoprotein VP7|Rotavirus C (isolate RVC/Human/United
Query: 3 SDGQLND 9
SDG LND
Sbjct: 94 SDGHLND 100
>sp|NCAP_SARS2|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 1 RGSDGQLNDV 10
RG DG++ D+
Sbjct: 95 RGGDGKMKDL 104
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 1 RGSDG 5
RGSDG
Sbjct: 304 RGSDG 308
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RGSDG 5
RGSDG
Sbjct: 304 RGSDG 308
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 DGQLNDV 10
+GQ+ND+
Sbjct: 7062 EGQINDM 7068
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 RGSDGQLNDV 10
+G GQ+N++
Sbjct: 74 KGYPGQVNEI 83
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 RGSDGQLNDV 10
+G GQ+N++
Sbjct: 74 KGYPGQVNEI 83
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 RGSDGQLNDV 10
+G GQ+N++
Sbjct: 74 KGYPGQVNEI 83
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 GSDGQL 7
G DGQL
Sbjct: 218 GGDGQL 223
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 GSDGQL 7
G DGQL
Sbjct: 218 GGDGQL 223
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 GSDGQL 7
G DGQL
Sbjct: 218 GGDGQL 223
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 4 DGQLNDV 10
+GQLN++
Sbjct: 609 EGQLNNI 615
>sp|CAP8_ADE12|PRE-HEXON-LINKING protein VIII|Human adenovirus A serotype 12
Query: 1 RGSDGQLND 9
RG QLND
Sbjct: 136 RGKGIQLND 144
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 SDGQLND 9
+DG LND
Sbjct: 2252 NDGGLND 2258
18|SequenceR|95|86|ELYYGRGSDG
>sp|DNLI_VARV|DNA ligase|Variola virus
Query: 3 YYGRGSDG 10
YYG+G+ G
Sbjct: 420 YYGKGAKG 427
>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 YYGRGSDG 10
YYG+G+ G
Sbjct: 420 YYGKGAKG 427
>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 YYGRGSDG 10
YYG+G+ G
Sbjct: 420 YYGKGAKG 427
>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 YYGRGSDG 10
YYG+G+ G
Sbjct: 420 YYGKGAKG 427
>sp|NP03_HHV2H|NUCLEAR phosphoprotein UL3|Human herpesvirus 2 (strain HG52)
Query: 3 YYGRGSDG 10
YY R SDG
Sbjct: 193 YYTRSSDG 200
>sp|NP03_HHV23|NUCLEAR phosphoprotein UL3|Human herpesvirus 2 (strain 333)
Query: 3 YYGRGSDG 10
YY R SDG
Sbjct: 193 YYTRSSDG 200
>sp|NP03_HHV1F|NUCLEAR phosphoprotein UL3|Human herpesvirus 1 (strain F)
Query: 3 YYGRGSDG 10
YY R SDG
Sbjct: 195 YYTRSSDG 202
>sp|NP03_HHV11|NUCLEAR phosphoprotein UL3|Human herpesvirus 1 (strain 17)
Query: 3 YYGRGSDG 10
YY R SDG
Sbjct: 195 YYTRSSDG 202
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 LYYGRGSD 9
L+YG GSD
Sbjct: 6496 LHYGAGSD 6503
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 3 YYGRG 7
YYGRG
Sbjct: 1726 YYGRG 1730
>sp|NP03_VZVO|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Oka
Query: 3 YYGRGSDG 10
YY R +DG
Sbjct: 170 YYTRSTDG 177
>sp|NP03_VZVD|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Dumas)
Query: 3 YYGRGSDG 10
YY R +DG
Sbjct: 170 YYTRSTDG 177
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 2 LYYGRGSD 9
LYYG SD
Sbjct: 37 LYYGDDSD 44
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 ELYYGRGSDG 10
E YYG G G
Sbjct: 210 EYYYGSGRRG 219
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 ELYYGR 6
ELY+GR
Sbjct: 435 ELYWGR 440
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ELYYGR 6
ELY+GR
Sbjct: 435 ELYWGR 440
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 ELYYGR 6
ELY+GR
Sbjct: 435 ELYWGR 440
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 ELYYGRGSDG 10
E YYG G G
Sbjct: 210 EYYYGSGRRG 219
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 LYYGRGS 8
+YYG GS
Sbjct: 1082 VYYGAGS 1088
>sp|VP22_HHV2H|TEGUMENT protein VP22|Human herpesvirus 2 (strain HG52)
Query: 1 ELYYG 5
ELYYG
Sbjct: 21 ELYYG 25
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 1 ELYYGRG 7
+LY GRG
Sbjct: 207 DLYLGRG 213
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 1 ELYYGRG 7
+LY GRG
Sbjct: 207 DLYLGRG 213
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 ELYYGRG 7
+LY GRG
Sbjct: 207 DLYLGRG 213
>sp|UL132_HCMVT|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 YGRGS 8
YGRGS
Sbjct: 205 YGRGS 209
>sp|UL132_HCMVM|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 YGRGS 8
YGRGS
Sbjct: 205 YGRGS 209
>sp|UL132_HCMVA|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 YGRGS 8
YGRGS
Sbjct: 205 YGRGS 209
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 2 LYYGRGSDG 10
+Y GRG+ G
Sbjct: 161 VYAGRGATG 169
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 2 LYYGRGS 8
YY RGS
Sbjct: 413 FYYQRGS 419
>sp|LANA1_HHV8P|PROTEIN LANA1|Human herpesvirus 8 type P
Query: 2 LYYGRGSDG 10
+Y G SDG
Sbjct: 244 IYVGSSSDG 252
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 2 LYYGRGSDG 10
+Y GRG+ G
Sbjct: 166 VYAGRGAAG 174
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 4 YGRGSDG 10
YGR DG
Sbjct: 183 YGRCKDG 189
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LYYGRGSD 9
+++G GSD
Sbjct: 6866 IHFGAGSD 6873
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LYYGRGSD 9
+++G GSD
Sbjct: 6843 IHFGAGSD 6850
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 LYYGRGSD 9
+++G GSD
Sbjct: 6843 IHFGAGSD 6850
>sp|UL136_HCMVT|PROTEIN UL136|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 LYYGRG 7
+YYG G
Sbjct: 147 MYYGSG 152
>sp|UL136_HCMVM|PROTEIN UL136|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LYYGRG 7
+YYG G
Sbjct: 147 MYYGSG 152
19|SequenceR|100|91|TGILMELYYG
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 GILMELYYG 10
G+L +YYG
Sbjct: 1077 GVLWTVYYG 1085
>sp|A28_YMTV5|ENVELOPE protein A28 homolog|Yaba monkey tumor virus (strain
Query: 3 ILMELYY 9
I+M++YY
Sbjct: 19 IIMQIYY 25
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GILMELYY 9
GIL ++YY
Sbjct: 826 GILSKIYY 833
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 TGILMELYYG 10
TG+L+ +YG
Sbjct: 2378 TGLLLLAHYG 2387
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TGILMELYYG 10
TG L L+Y
Sbjct: 435 TGFLASLFYA 444
>sp|US18_HCMVT|TRANSMEMBRANE protein HWLF5|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 ILMELYYG 10
+LME+Y+G
Sbjct: 42 LLMEVYHG 49
>sp|US18_HCMVM|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 ILMELYYG 10
+LME+Y+G
Sbjct: 42 LLMEVYHG 49
>sp|US18_HCMVA|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 ILMELYYG 10
+LME+Y+G
Sbjct: 42 LLMEVYHG 49
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 TGILMELYY 9
TG L L+Y
Sbjct: 435 TGFLASLFY 443
Query: 1 TGILMELYYG 10
+G+L +Y+G
Sbjct: 1079 SGVLWTVYHG 1088
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 TGILMELYY 9
TG L L+Y
Sbjct: 435 TGFLASLFY 443
Query: 1 TGILMELYYG 10
+G+L +Y+G
Sbjct: 1079 SGVLWTVYHG 1088
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 TGILMELYY 9
TG L L+Y
Sbjct: 434 TGFLASLFY 442
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 TGILMELYY 9
TG L L+Y
Sbjct: 435 TGFLASLFY 443
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 TGILMELYY 9
TG L L+Y
Sbjct: 434 TGFLASLFY 442
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 TGILMELYYG 10
+G+L +Y+G
Sbjct: 1079 SGVLWTVYHG 1088
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 TGILMELYYG 10
+G+L +Y+G
Sbjct: 1079 SGVLWTVYHG 1088
Query: 1 TGILMELYY 9
TG L L+Y
Sbjct: 435 TGFLAALFY 443
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TGILMELYY 9
TG L L+Y
Sbjct: 435 TGFLAALFY 443
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 1 TGILMELYY 9
TG L L+Y
Sbjct: 435 TGFLAALFY 443
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 1 TGILMELYY 9
TG L L+Y
Sbjct: 436 TGFLAALFY 444
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 1 TGILMELYY 9
TG L L+Y
Sbjct: 436 TGFLAALFY 444
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TGILMELYY 9
TG L L+Y
Sbjct: 435 TGFLAALFY 443
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TGILMELYY 9
TG L L+Y
Sbjct: 435 TGFLAALFY 443
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 TGILMELYY 9
TG L L+Y
Sbjct: 435 TGFLAALFY 443
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 GILMELY 8
GIL+E Y
Sbjct: 763 GILLEAY 769
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 GILMELY 8
GIL+E Y
Sbjct: 763 GILLEAY 769
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 TGILMELYY 9
TG L L+Y
Sbjct: 434 TGFLSALFY 442
20|SequenceR|105|96|LKQPPTGILM
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 1 LKQPPTGIL 9
LK PP G+L
Sbjct: 144 LKTPPEGVL 152
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 LKQPPTGILM 10
L+ PP G+L+
Sbjct: 144 LRIPPEGVLL 153
>sp|UL129_HCMVA|UNCHARACTERIZED protein UL129|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 KQPPTGILM 10
+QPP G L+
Sbjct: 63 RQPPAGTLL 71
>sp|VME1_CVH22|MEMBRANE protein|Human coronavirus 229E (HCoV-229E)
Query: 1 LKQPPTGI 8
++Q PTGI
Sbjct: 132 IQQAPTGI 139
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 QPPTGI 8
+PPTG+
Sbjct: 2889 EPPTGV 2894
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 LKQPPTGIL 9
L+ PP G+L
Sbjct: 143 LRIPPEGVL 151
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 LKQPPTGIL 9
L+ PP G+L
Sbjct: 143 LRIPPEGVL 151
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 LKQPPTGIL 9
L+ PP G+L
Sbjct: 143 LRIPPEGVL 151
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 LKQPPTGIL 9
L+ PP G+L
Sbjct: 143 LRIPPEGVL 151
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 LKQPPTGIL 9
L+ PP G+L
Sbjct: 143 LRIPPEGVL 151
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 LKQPPTGIL 9
L+ PP G+L
Sbjct: 143 LRIPPEGVL 151
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 LKQPPTGIL 9
L+ PP G+L
Sbjct: 143 LRIPPEGVL 151
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 LKQPPTGIL 9
L+ PP G+L
Sbjct: 143 LRIPPEGVL 151
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 LKQPPTGIL 9
L+ PP G+L
Sbjct: 143 LRIPPEGVL 151
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 1 LKQPPTGIL 9
L+ PP G+L
Sbjct: 143 LRIPPEGVL 151
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 4 PPTGI 8
PPTG+
Sbjct: 307 PPTGV 311
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 4 PPTGIL 9
PP GIL
Sbjct: 271 PPLGIL 276
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 QPPTGI 8
QPP+G+
Sbjct: 317 QPPSGV 322
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 1 LKQPPT 6
L+QPPT
Sbjct: 36 LRQPPT 41
>sp|VCYCL_HHV8P|VIRAL cyclin homolog|Human herpesvirus 8 type P
Query: 4 PPTGIL 9
PP+G+L
Sbjct: 7 PPSGLL 12
>sp|SF33K_ADE41|PROTEIN 33K|Human adenovirus F serotype 41
Query: 3 QPPTG 7
QPPTG
Sbjct: 84 QPPTG 88
>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 3 QPPTG 7
QPPTG
Sbjct: 338 QPPTG 342
>sp|VP6_ROTHG|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate RVC/Human/United
Query: 1 LKQPPTGILM 10
LK+P + +LM
Sbjct: 214 LKRPISNVLM 223
>sp|VP6_ROTHF|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate
Query: 1 LKQPPTGILM 10
LK+P + +LM
Sbjct: 214 LKRPISNVLM 223
>sp|VP6_ROTHC|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate RVC/Human/United
Query: 1 LKQPPTGILM 10
LK+P + +LM
Sbjct: 214 LKRPISNVLM 223
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 4 PPTGI 8
PPTG+
Sbjct: 410 PPTGV 414
21|SequenceR|110|101|DVLIQLKQPP
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 3 LIQLKQPP 10
LIQLK PP
Sbjct: 561 LIQLKCPP 568
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 3 LIQLKQPP 10
L+QLK PP
Sbjct: 547 LVQLKCPP 554
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 3 LIQLKQPP 10
L+QLK PP
Sbjct: 547 LVQLKCPP 554
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 3 LIQLKQPP 10
L+QLK PP
Sbjct: 554 LVQLKCPP 561
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 3 LIQLKQPP 10
L+QLK PP
Sbjct: 540 LVQLKCPP 547
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 3 LIQLKQPP 10
L+QLK PP
Sbjct: 547 LLQLKCPP 554
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 3 LIQLKQPP 10
L+QLK PP
Sbjct: 534 LMQLKCPP 541
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 3 LIQLKQPP 10
L+QLK PP
Sbjct: 586 LLQLKCPP 593
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 3 LIQLKQPP 10
LIQ+K PP
Sbjct: 556 LIQIKCPP 563
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 3 LIQLKQPP 10
L+QLK PP
Sbjct: 564 LLQLKCPP 571
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 3 LIQLKQPP 10
L+Q+K PP
Sbjct: 548 LVQIKCPP 555
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 3 LIQLKQPP 10
L+Q+K PP
Sbjct: 550 LVQIKCPP 557
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 3 LIQLKQPP 10
L+QLK PP
Sbjct: 567 LLQLKCPP 574
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VLIQLKQP 9
+++QLK+P
Sbjct: 296 IIVQLKEP 303
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 3 LIQLKQPP 10
L+QLK PP
Sbjct: 565 LLQLKCPP 572
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 3 LIQLKQPP 10
L+QLK PP
Sbjct: 548 LLQLKCPP 555
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 3 LIQLKQPP 10
L+QLK PP
Sbjct: 548 LLQLKCPP 555
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 3 LIQLKQPP 10
L+Q+K PP
Sbjct: 551 LLQMKCPP 558
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 3 LIQLKQPP 10
L QLK PP
Sbjct: 553 LTQLKCPP 560
>sp|UNG_VAR67|URACIL-DNA glycosylase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 LIQLKQP 9
IQLKQP
Sbjct: 50 FIQLKQP 56
>sp|UNG_VARV|URACIL-DNA glycosylase|Variola virus
Query: 3 LIQLKQP 9
IQLKQP
Sbjct: 50 FIQLKQP 56
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DVLIQLKQP 9
++++QLK P
Sbjct: 276 NIIVQLKTP 284
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 3 LIQLKQPP 10
L QLK PP
Sbjct: 553 LTQLKCPP 560
>sp|UNG_VACCA|URACIL-DNA glycosylase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 LIQLKQP 9
IQLKQP
Sbjct: 50 FIQLKQP 56
>sp|UNG_MONPV|URACIL-DNA glycosylase|Monkeypox virus (MPXV)
Query: 3 LIQLKQP 9
IQLKQP
Sbjct: 50 FIQLKQP 56
>sp|UNG_VACCC|URACIL-DNA glycosylase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 LIQLKQP 9
IQLKQP
Sbjct: 50 FIQLKQP 56
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 3 LIQLKQPP 10
L+Q+K PP
Sbjct: 536 LVQIKCPP 543
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 3 LIQLKQPP 10
L+Q+K PP
Sbjct: 552 LLQIKCPP 559
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 3 LIQLKQPP 10
L+Q+K PP
Sbjct: 535 LVQIKCPP 542
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 3 LIQLKQPP 10
L+Q+K PP
Sbjct: 548 LLQIKCPP 555
>sp|Y116_ADE02|UNCHARACTERIZED 11.6 kDa early protein|Human adenovirus C serotype 2
Query: 3 LIQLKQPP 10
L+Q ++PP
Sbjct: 67 LVQQRRPP 74
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 3 LIQLKQPP 10
LIQ++ PP
Sbjct: 540 LIQVRCPP 547
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 3 LIQLKQPP 10
L+Q+K PP
Sbjct: 555 LLQVKCPP 562
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 DVLIQLKQP 9
++LI L QP
Sbjct: 44 EILINLMQP 52
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 DVLIQLKQP 9
++LI L QP
Sbjct: 44 EILINLMQP 52
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 DVLIQLKQP 9
++LI L QP
Sbjct: 44 EILINLMQP 52
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 DVLIQLKQP 9
++LI L QP
Sbjct: 44 EILINLMQP 52
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 DVLIQLKQP 9
++LI L QP
Sbjct: 44 EILINLMQP 52
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 DVLIQLKQP 9
++LI L QP
Sbjct: 44 EILINLMQP 52
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 DVLIQLKQP 9
++LI L QP
Sbjct: 44 EILINLMQP 52
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 DVLIQLKQP 9
++LI L QP
Sbjct: 44 EILINLMQP 52
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 DVLIQLKQP 9
++LI L QP
Sbjct: 44 EILINLMQP 52
>sp|YVBA_VACCC|UNCHARACTERIZED 11.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DVLIQLKQPP 10
D+L+ K PP
Sbjct: 41 DILVHGKIPP 50
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 3 LIQLKQPP 10
L+QL +PP
Sbjct: 376 LLQLGEPP 383
>sp|GL_HHV6U|ENVELOPE glycoprotein L|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DVLIQLKQPP 10
DV+ L QPP
Sbjct: 63 DVMSILLQPP 72
22|SequenceR|115|106|NSSGTDVLIQ
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 NSSGTDVLIQ 10
++SG+DVL Q
Sbjct: 3242 SNSGSDVLYQ 3251
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 NSSGTDVLIQ 10
++SG+DVL Q
Sbjct: 3242 SNSGSDVLYQ 3251
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 SGTDVLIQ 10
SG++VLIQ
Sbjct: 660 SGSEVLIQ 667
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 SGTDVLIQ 10
S +DVLIQ
Sbjct: 660 SASDVLIQ 667
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 NSSGTDVLIQ 10
++SG DVL Q
Sbjct: 3219 SNSGADVLYQ 3228
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 NSSGTDVLIQ 10
++SG DVL Q
Sbjct: 3219 SNSGADVLYQ 3228
>sp|M1_DHVI1|MATRIX protein 1|Dhori virus (strain Indian/1313/61) (Dho)
Query: 1 NSSGTDVLIQ 10
++ GTD LIQ
Sbjct: 46 STYGTDELIQ 55
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 NSSGTDVLIQ 10
N+SG D+L +
Sbjct: 34 NASGGDILTK 43
>sp|VL2_HPV07|MINOR capsid protein L2|Human papillomavirus 7
Query: 2 SSGTDV 7
SSGTDV
Sbjct: 137 SSGTDV 142
>sp|VL2_HPV40|MINOR capsid protein L2|Human papillomavirus 40
Query: 2 SSGTDV 7
SSGTDV
Sbjct: 137 SSGTDV 142
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 NSSGTDVL 8
N+SG D L
Sbjct: 6688 NASGNDAL 6695
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 1 NSSGTDVLI 9
++SGTD +I
Sbjct: 169 STSGTDTVI 177
23|SequenceR|120|111|GAVAFNSSGT
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 AVAFNSS 8
+VAFNSS
Sbjct: 355 SVAFNSS 361
>sp|U21_HHV7R|U21 glycoprotein|Human herpesvirus 7 (strain RK)
Query: 3 VAFNSSG 9
V FNS+G
Sbjct: 290 VGFNSTG 296
>sp|U21_HHV7J|U21 glycoprotein|Human herpesvirus 7 (strain JI)
Query: 3 VAFNSSG 9
V FNS+G
Sbjct: 290 VGFNSTG 296
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GAVAFNSSGT 10
GAV FN+ T
Sbjct: 677 GAVRFNTRRT 686
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GAVAFNSSGT 10
GAV FN+ T
Sbjct: 677 GAVRFNTRRT 686
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GAVAFNSSGT 10
GAV FN+ T
Sbjct: 677 GAVRFNTRRT 686
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GAVAFNSSGT 10
GAV FN+ T
Sbjct: 677 GAVRFNTRRT 686
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GAVAFNSSGT 10
GAV FN+ T
Sbjct: 677 GAVRFNTRRT 686
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GAVAFNSSGT 10
GAV FN+ T
Sbjct: 671 GAVRFNTRRT 680
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GAVAFNSSGT 10
GAV FN+ T
Sbjct: 677 GAVRFNTRRT 686
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GAVAFNSSGT 10
GAV FN+ T
Sbjct: 677 GAVRFNTRRT 686
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GAVAFNSSGT 10
GAV FN+ T
Sbjct: 677 GAVRFNTRRT 686
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GAVAFNSSGT 10
GAV FN+ T
Sbjct: 677 GAVRFNTRRT 686
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 1 GAVAFNSSG 9
G+V +NS G
Sbjct: 434 GSVNYNSEG 442
>sp|SPIK2_ADE40|FIBER protein 2|Human adenovirus F serotype 40
Query: 1 GAVAFNSSG 9
GA+ FN++G
Sbjct: 145 GALGFNNTG 153
>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41
Query: 1 GAVAFNSSG 9
GA+ FN++G
Sbjct: 145 GALGFNNTG 153
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 3 VAFNSSGT 10
+ FN SGT
Sbjct: 311 IPFNPSGT 318
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GAVAFNSSGT 10
GAV FN+ T
Sbjct: 656 GAVRFNTRRT 665
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 GAVAFNSSGT 10
GAV FN+ T
Sbjct: 677 GAVRFNTRRT 686
24|SequenceR|125|116|YSHPTGAVAF
>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YSHPTGAVAF 10
YS P G V F
Sbjct: 322 YSQPIGVVYF 331
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 YSHPTGAVAF 10
Y+H TG++ F
Sbjct: 447 YTHWTGSIRF 456
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 YSHPTGAVAF 10
Y+H TG++ F
Sbjct: 438 YTHWTGSLRF 447
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 YSHPTGAVAF 10
Y+H TG++ F
Sbjct: 438 YTHWTGSLRF 447
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 YSHPTGAVAF 10
Y+H TG++ F
Sbjct: 446 YTHWTGSLRF 455
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 YSHPTGAVAF 10
Y+H TG++ F
Sbjct: 442 YTHWTGSLRF 451
>sp|SPIK2_ADE40|FIBER protein 2|Human adenovirus F serotype 40
Query: 3 HPTGAVAF 10
+PTGA+ F
Sbjct: 142 NPTGALGF 149
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 SHPTGAV 8
SHP+G V
Sbjct: 3254 SHPSGDV 3260
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 SHPTGAV 8
SHP+G V
Sbjct: 3254 SHPSGDV 3260
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I01A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I01A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 1 YSHPTG 6
YSH TG
Sbjct: 30 YSHGTG 35
>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41
Query: 3 HPTGAVAF 10
+PTGA+ F
Sbjct: 142 NPTGALGF 149
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 1 YSHPTG 6
++HPTG
Sbjct: 373 FNHPTG 378
25|SequenceR|130|121|FYTDIYSHPT
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 FYTDIYSHPT 10
FY D+YS PT
Sbjct: 5298 FYRDLYSSPT 5307
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 YTDIYSH 8
YTDI++H
Sbjct: 729 YTDIFTH 735
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 YTDIYSH 8
YTDI++H
Sbjct: 729 YTDIFTH 735
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 YTDIYSH 8
YTDI++H
Sbjct: 729 YTDIFTH 735
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 YTDIYSH 8
YT+IY+H
Sbjct: 449 YTEIYNH 455
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 FYTDIYSH 8
FY DI SH
Sbjct: 1225 FYGDIVSH 1232
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 FYTDIYSH 8
FY DI SH
Sbjct: 1255 FYGDIVSH 1262
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 FYTDIYSH 8
FY DI SH
Sbjct: 1205 FYGDIVSH 1212
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 YTDIYSHPT 10
Y D HPT
Sbjct: 1117 YRDALEHPT 1125
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 FYTDIYSH 8
FY DI SH
Sbjct: 1205 FYGDIVSH 1212
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 FYTDIYSH 8
FY DI SH
Sbjct: 1225 FYGDIVSH 1232
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 FYTDIYSH 8
FY DI SH
Sbjct: 1255 FYGDIVSH 1262
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 FYTDIYSH 8
FY D+ SH
Sbjct: 1168 FYGDVVSH 1175
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 3 TDIYSHPT 10
TDIY H T
Sbjct: 32 TDIYYHAT 39
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 YTDIYSHP 9
Y DI HP
Sbjct: 1031 YRDILEHP 1038
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 YTDIYSHP 9
Y DI HP
Sbjct: 1031 YRDILEHP 1038
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 3 TDIYSHPT 10
TDIY H T
Sbjct: 32 TDIYYHAT 39
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 FYTDIYSH 8
FY D+ SH
Sbjct: 1168 FYGDVVSH 1175
>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)
Query: 4 DIYSHP 9
++Y HP
Sbjct: 127 EVYDHP 132
>sp|MAT_INCJJ|POLYPROTEIN p42|Influenza C virus (strain C/JJ/1950)
Query: 4 DIYSHP 9
++Y HP
Sbjct: 127 EVYDHP 132
>sp|MAT_INCHY|POLYPROTEIN p42|Influenza C virus (strain C/Hyogo/1/1983)
Query: 4 DIYSHP 9
++Y HP
Sbjct: 127 EVYDHP 132
>sp|MAT_INCCA|POLYPROTEIN p42|Influenza C virus (strain C/California/1978)
Query: 4 DIYSHP 9
++Y HP
Sbjct: 127 EVYDHP 132
>sp|MAT_INCAA|POLYPROTEIN p42|Influenza C virus (strain C/Ann
Query: 4 DIYSHP 9
++Y HP
Sbjct: 127 EVYDHP 132
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 2 YTDIYSHP 9
Y D+YS P
Sbjct: 1060 YDDLYSTP 1067
>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV
Query: 2 YTDIYSH 8
+TDI SH
Sbjct: 177 FTDIMSH 183
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 YTDIYSH 8
+T+IY+H
Sbjct: 449 HTEIYNH 455
26|SequenceR|135|126|SRETDFYTDI
>sp|VIF_HV2D2|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 ETDFYTDI 10
E +FYTD+
Sbjct: 93 ERNFYTDV 100
>sp|VCP_VACCC|COMPLEMENT control protein C3|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 DFYTD 9
DFYTD
Sbjct: 164 DFYTD 168
>sp|VIF_HV2EH|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 ETDFYTDI 10
E FYTD+
Sbjct: 93 ERSFYTDV 100
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 1 SRETDFYTDI 10
SR DF TD+
Sbjct: 311 SRGIDFMTDL 320
>sp|ORF24_TTVV3|ORF2/4 protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 6 FYTDI 10
FYTDI
Sbjct: 249 FYTDI 253
>sp|UL148_HCMVM|MEMBRANE protein UL148|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 ETDFYTD 9
ETDFY +
Sbjct: 195 ETDFYMN 201
>sp|VIF_HV2UC|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 6 FYTDI 10
FYTD+
Sbjct: 96 FYTDV 100
27|SequenceR|140|131|SRYTSSRETD
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 2 RYTSSRETD 10
RY ++RE D
Sbjct: 107 RYRNAREAD 115
28|SequenceR|145|136|VDFGKSRYTS
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 DFGKSRY 8
DFG SRY
Sbjct: 335 DFGISRY 341
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 1 VDFGKSRYT 9
VDFGK +T
Sbjct: 169 VDFGKEAHT 177
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 2 DFGKSRY 8
DFG SRY
Sbjct: 335 DFGISRY 341
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 2 DFGKSRY 8
DFG SRY
Sbjct: 335 DFGISRY 341
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 VDFGKSRYT 9
V+FGK+ T
Sbjct: 526 VEFGKTHAT 534
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 GKSRYTS 10
G+SR+TS
Sbjct: 565 GESRHTS 571
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 GKSRYTS 10
G+SR+TS
Sbjct: 565 GESRHTS 571
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 GKSRYTS 10
G+SR+TS
Sbjct: 566 GESRHTS 572
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 GKSRYTS 10
G+SR+TS
Sbjct: 565 GESRHTS 571
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 GKSRYTS 10
G+SR+TS
Sbjct: 559 GESRHTS 565
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 GKSRYTS 10
G+SR+TS
Sbjct: 565 GESRHTS 571
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 GKSRYTS 10
G+SR+TS
Sbjct: 565 GESRHTS 571
29|SequenceR|150|141|TYKVTVDFGK
>sp|NSP2_ROTHD|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 2 YKVTVDFGK 10
YK+TV+ GK
Sbjct: 187 YKITVNEGK 195
>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)
Query: 1 TYKVTVDFG 9
TY+VT ++G
Sbjct: 171 TYEVTSEYG 179
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 2 YKVTVDFGK 10
Y++ DF K
Sbjct: 421 YRINTDFSK 429
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 2 YKVTVDFGK 10
Y++ DF K
Sbjct: 421 YRINTDFSK 429
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 2 YKVTVDF 8
YKVT+ F
Sbjct: 416 YKVTITF 422
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 2 YKVTVDF 8
YKVT+ F
Sbjct: 416 YKVTITF 422
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 2 YKVTVDF 8
YKVT+ F
Sbjct: 416 YKVTITF 422
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 2 YKVTVDF 8
YKVT+ F
Sbjct: 416 YKVTITF 422
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 TYKVTVDFG 9
TYK +D G
Sbjct: 1191 TYKAELDLG 1199
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 TYKVTVDFG 9
TYK +D G
Sbjct: 1191 TYKADLDLG 1199
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 TYKVTVDFG 9
TYK +D G
Sbjct: 1191 TYKADLDLG 1199
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 TYKVTVDFG 9
TY+ VD G
Sbjct: 2742 TYETDVDLG 2750
>sp|NEF_HV196|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 TYKVTVDFG 9
TYK D G
Sbjct: 89 TYKAAFDLG 97
>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus
Query: 3 KVTVDF 8
+VTVDF
Sbjct: 23 RVTVDF 28
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 KVTVDFGK 10
KVT+++G+
Sbjct: 187 KVTLEYGR 194
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 3 KVTVDFGK 10
KVT+++G+
Sbjct: 187 KVTLEYGR 194
>sp|VP6_ROTHG|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate RVC/Human/United
Query: 1 TYKVTVD 7
+Y++T+D
Sbjct: 286 SYRITID 292
>sp|VP6_ROTHF|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate
Query: 1 TYKVTVD 7
+Y++T+D
Sbjct: 286 SYRITID 292
>sp|VP6_ROTHC|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate RVC/Human/United
Query: 1 TYKVTVD 7
+Y++T+D
Sbjct: 286 SYRITID 292
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 3 KVTVDFGK 10
+VT+ FGK
Sbjct: 430 RVTLAFGK 437
30|SequenceR|155|146|TWSGQTYKVT
>sp|NS1_I30A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 WSGQTYKVT 10
W+G T +V+
Sbjct: 187 WNGNTVRVS 195
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 WSGQTYKVT 10
W+ +T+K+T
Sbjct: 419 WAFKTHKIT 427
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 WSGQTYKVT 10
W+ +T+K+T
Sbjct: 419 WAFKTHKIT 427
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 WSGQTYKVT 10
W+ +T+K+T
Sbjct: 419 WAFKTHKIT 427
>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)
Query: 2 WSGQTYKVT 10
+ G+TY VT
Sbjct: 200 YGGKTYNVT 208
>sp|K81_HHV8P|PROTEIN K8.1|Human herpesvirus 8 type P
Query: 2 WSGQTYK 8
WSGQ Y+
Sbjct: 42 WSGQVYQ 48
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 TWSGQTY 7
TW GQ Y
Sbjct: 273 TWLGQQY 279
>sp|NS1_I67A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 WSGQTYKVT 10
W+G T +V+
Sbjct: 187 WNGNTVRVS 195
>sp|NS1_I61A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 WSGQTYKVT 10
W+G T +V+
Sbjct: 187 WNGNTVRVS 195
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 TWSGQTYKVT 10
++S Q YK+T
Sbjct: 777 SFSQQRYKIT 786
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 1 TWSGQTYKVT 10
++S Q YK+T
Sbjct: 777 SFSQQRYKIT 786
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 TWSGQTYKVT 10
T+SGQT T
Sbjct: 176 TYSGQTPNAT 185
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 WSGQTYKV 9
+ G TYKV
Sbjct: 2172 FPGSTYKV 2179
31|SequenceR|160|151|EGVFGTWSGQ
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 4 FGTWS 8
FGTWS
Sbjct: 74 FGTWS 78
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 3 VFGTW 7
VFGTW
Sbjct: 179 VFGTW 183
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 3 VFGTW 7
VFGTW
Sbjct: 174 VFGTW 178
>sp|ST_POVBK|SMALL t antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 4 FGTWS 8
FGTWS
Sbjct: 74 FGTWS 78
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GVFGTWS 8
G FG WS
Sbjct: 44 GFFGNWS 50
>sp|PHOSP_DUVV|PHOSPHOPROTEIN virus (DUVV)
Query: 1 EGVFGTWS 8
EG F WS
Sbjct: 112 EGFFKIWS 119
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 2 GVFGTW 7
G FG W
Sbjct: 302 GTFGNW 307
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 2 GVFGTW 7
G FG W
Sbjct: 305 GTFGNW 310
>sp|VE6_HPV51|PROTEIN E6|Human papillomavirus 51
Query: 3 VFGTWSGQ 10
+ G W+GQ
Sbjct: 128 IAGRWTGQ 135
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 VFGTWSG 9
+ GTW G
Sbjct: 290 LLGTWQG 296
>sp|ST_POVJC|SMALL t antigen|JC polyomavirus (JCPyV) (JCV)
Query: 4 FGTWS 8
FGTW+
Sbjct: 74 FGTWN 78
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 4 FGTWS 8
FGTW+
Sbjct: 74 FGTWN 78
>sp|ST_POVBA|SMALL t antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 4 FGTWS 8
FGTW+
Sbjct: 74 FGTWN 78
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 4 FGTWS 8
FGTW+
Sbjct: 74 FGTWN 78
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 EGVFGT 6
+G+FGT
Sbjct: 939 QGIFGT 944
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 EGVFGT 6
+G+FGT
Sbjct: 946 QGIFGT 951
>sp|VIE2_HCMVT|VIRAL transcription factor IE2|Human cytomegalovirus (strain Towne)
Query: 1 EGVFGTWS 8
EGV WS
Sbjct: 466 EGVKAAWS 473
>sp|VIE2_HCMVA|VIRAL transcription factor IE2|Human cytomegalovirus (strain AD169)
Query: 1 EGVFGTWS 8
EGV WS
Sbjct: 467 EGVKAAWS 474
>sp|IE247_HCMVT|45 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 1 EGVFGTWS 8
EGV WS
Sbjct: 297 EGVKAAWS 304
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 6 TWSGQ 10
TWSG+
Sbjct: 608 TWSGR 612
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 6 TWSGQ 10
TWSG+
Sbjct: 608 TWSGR 612
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 6 TWSGQ 10
TWSG+
Sbjct: 608 TWSGR 612
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 6 TWSGQ 10
TW GQ
Sbjct: 216 TWEGQ 220
>sp|CAPSD_HBVC8|CAPSID protein|Hepatitis B virus genotype C
Query: 4 FGTWSG 9
FG W G
Sbjct: 122 FGVWIG 127
>sp|CEP3_HCMVM|CYTOPLASMIC envelopment protein 3|Human cytomegalovirus (strain Merlin)
Query: 4 FGTWSGQ 10
FGT SG+
Sbjct: 13 FGTTSGE 19
32|SequenceR|165|156|ITVLDEGVFG
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 TVLDEG 7
T+LDEG
Sbjct: 1936 TILDEG 1941
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 3 VLDEGVF 9
+LDEGV
Sbjct: 2036 ILDEGVL 2042
>sp|NS2A_CVHOC|NON-STRUCTURAL protein 2a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 VLDEGV 8
+LDEGV
Sbjct: 34 ILDEGV 39
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 VLDEGVF 9
VLD+G++
Sbjct: 1492 VLDDGIY 1498
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 VLDEGVF 9
VLD+G++
Sbjct: 1491 VLDDGIY 1497
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 VLDEGVF 9
VLD+G++
Sbjct: 1492 VLDDGIY 1498
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 1 ITVLDEGVFG 10
+ +LDEG+ G
Sbjct: 648 VKLLDEGLDG 657
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 ITVLDEGVFG 10
+ +LDEG+ G
Sbjct: 648 VKLLDEGLDG 657
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 ITVLDEGVFG 10
+ +LDEG+ G
Sbjct: 648 VKLLDEGLDG 657
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 1 ITVLDEGVFG 10
+ +LDEG+ G
Sbjct: 648 VKLLDEGLDG 657
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 4 LDEGVFG 10
L+E VFG
Sbjct: 1801 LEESVFG 1807
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 5 DEGVFG 10
D+G+FG
Sbjct: 1312 DDGLFG 1317
>sp|CEP1_HHV6Z|CYTOPLASMIC envelopment protein 1|Human herpesvirus 6B (strain Z29)
Query: 1 ITVLDEGVF 9
ITV D+G++
Sbjct: 44 ITVGDDGIW 52
>sp|CEP1_HHV6U|CYTOPLASMIC envelopment protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ITVLDEGVF 9
ITV D+G++
Sbjct: 44 ITVGDDGIW 52
33|SequenceR|170|161|NFGKPITVLD
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 NFGKPITV 8
N+GKP+T+
Sbjct: 6825 NYGKPVTL 6832
Query: 2 FGKPITVL 9
FGKP+ L
Sbjct: 1980 FGKPVIWL 1987
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 NFGKPIT 7
NFG P+T
Sbjct: 924 NFGDPVT 930
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 NFGKPIT 7
NFG P+T
Sbjct: 924 NFGDPVT 930
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 NFGKPITV 8
N+GKPI +
Sbjct: 6862 NYGKPINL 6869
Query: 2 FGKPI 6
FGKP+
Sbjct: 2016 FGKPV 2020
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 NFGKPITV 8
N+GKPI +
Sbjct: 6912 NYGKPINL 6919
Query: 2 FGKPI 6
FGKP+
Sbjct: 2066 FGKPV 2070
>sp|VP35_EBORE|POLYMERASE cofactor VP35|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 NFGKP 5
NFGKP
Sbjct: 202 NFGKP 206
>sp|VP35_EBORR|POLYMERASE cofactor VP35|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 NFGKP 5
NFGKP
Sbjct: 202 NFGKP 206
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 FGKPITVLD 10
GKP+T D
Sbjct: 2350 LGKPLTAED 2358
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 FGKPITVL 9
FGKP+ L
Sbjct: 1980 FGKPVIWL 1987
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 FGKPIT 7
FG+P+T
Sbjct: 1139 FGEPLT 1144
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 FGKPITVL 9
FGKP+ L
Sbjct: 2036 FGKPVIWL 2043
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 FGKPITVL 9
FGKP+ L
Sbjct: 2036 FGKPVIWL 2043
>sp|VL2_HPVME|MINOR capsid protein L2|Human papillomavirus type ME180
Query: 3 GKPITVLD 10
GKP TV+D
Sbjct: 76 GKPNTVVD 83
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 FGKPI 6
FGKP+
Sbjct: 2016 FGKPV 2020
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 FGKPI 6
FGKP+
Sbjct: 2066 FGKPV 2070
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 5 PITVLD 10
P+TV+D
Sbjct: 401 PVTVID 406
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 NFGKPITVLD 10
+FG I +LD
Sbjct: 383 SFGNNIKILD 392
34|SequenceR|175|166|VLFSTNFGKP
>sp|VP35_EBORE|POLYMERASE cofactor VP35|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 LFSTNFGKP 10
L NFGKP
Sbjct: 198 LTEENFGKP 206
>sp|VP35_EBOZ5|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 LFSTNFGKP 10
L NFGKP
Sbjct: 209 LTEENFGKP 217
>sp|VP35_EBORR|POLYMERASE cofactor VP35|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 LFSTNFGKP 10
L NFGKP
Sbjct: 198 LTEENFGKP 206
>sp|VP35_EBOZM|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 LFSTNFGKP 10
L NFGKP
Sbjct: 209 LTEENFGKP 217
>sp|VP2_SVM93|MINOR capsid protein VP2|Sapporo virus (strain Human/United
Query: 4 STNFGKP 10
+T FGKP
Sbjct: 141 TTKFGKP 147
>sp|PG166_MONPV|PROTEIN OPG166|Monkeypox virus (MPXV)
Query: 1 VLFSTNFG 8
V+FSTN G
Sbjct: 149 VVFSTNLG 156
>sp|PG166_VACCC|PROTEIN OPG166|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VLFSTNFG 8
V+FSTN G
Sbjct: 149 VVFSTNLG 156
>sp|PG166_VARV|PROTEIN OPG166|Variola virus
Query: 1 VLFSTNFG 8
V+FSTN G
Sbjct: 149 VVFSTNLG 156
>sp|PG166_VAR67|PROTEIN OPG166|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 VLFSTNFG 8
V+FSTN G
Sbjct: 149 VVFSTNLG 156
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain
Query: 1 VLFSTNF 7
+LFS NF
Sbjct: 48 ILFSNNF 54
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 1 VLFSTNF 7
+LFS NF
Sbjct: 48 ILFSNNF 54
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 1 VLFSTNF 7
+LFS NF
Sbjct: 48 ILFSNNF 54
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 1 VLFSTNF 7
+LFST+F
Sbjct: 200 ILFSTDF 206
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 1 VLFSTNF 7
+LFST+F
Sbjct: 200 ILFSTDF 206
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 LFSTNFGKP 10
LF+ N G P
Sbjct: 954 LFNRNIGDP 962
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 LFSTNFGKP 10
LF+ N G P
Sbjct: 954 LFNRNIGDP 962
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 LFSTNFGKP 10
LF+ N G P
Sbjct: 954 LFNRNIGDP 962
>sp|ORF2_TTVV3|ORF2 protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 3 FSTNFGKP 10
+TN G+P
Sbjct: 40 LATNLGRP 47
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 VLFSTNFG 8
+LF T FG
Sbjct: 1882 ILFRTTFG 1889
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 LFSTNFGKP 10
LF+ N G P
Sbjct: 952 LFNRNIGDP 960
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 LFSTNFGKP 10
LF+ N G P
Sbjct: 948 LFNRNIGDP 956
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 LFSTNFGKP 10
LF+ N G P
Sbjct: 948 LFNRNIGDP 956
>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 6 NFGKP 10
NFG+P
Sbjct: 202 NFGRP 206
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 VLFSTNFG 8
+LF T FG
Sbjct: 1882 ILFRTTFG 1889
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 FSTNFGKP 10
F NFG P
Sbjct: 921 FYRNFGDP 928
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 FSTNFGKP 10
F NFG P
Sbjct: 921 FYRNFGDP 928
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 3 FSTNFGK 9
+ TNFG+
Sbjct: 453 YGTNFGR 459
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 VLFSTNFGKP 10
+LFS + G P
Sbjct: 13 ILFSASSGNP 22
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 VLFSTNFGKP 10
V+FST G P
Sbjct: 330 VVFSTTQGLP 339
>sp|UL33_HCMVM|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain
Query: 2 LFSTNF 7
L+STNF
Sbjct: 76 LYSTNF 81
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 VLFSTNFG 8
+LF T FG
Sbjct: 1875 LLFRTTFG 1882
>sp|UL33_HCMVA|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain
Query: 2 LFSTNF 7
L+STNF
Sbjct: 75 LYSTNF 80
>sp|ORF24_TTVV3|ORF2/4 protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 3 FSTNFGKP 10
+TN G+P
Sbjct: 40 LATNLGRP 47
35|SequenceR|180|171|ITAINVLFST
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 NVLFST 10
NVLFST
Sbjct: 4683 NVLFST 4688
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 NVLFST 10
NVLFST
Sbjct: 4706 NVLFST 4711
36|SequenceR|185|176|NESEFITAIN
>sp|NEC2_HHV6U|NUCLEAR egress protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 NESEFITAI 9
NESE+I+ +
Sbjct: 155 NESEYISLL 163
>sp|NEC2_HHV6Z|NUCLEAR egress protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 NESEFITAI 9
NESE+I+ +
Sbjct: 155 NESEYISLL 163
37|SequenceR|190|181|GPLFFNESEF
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GPLFFNES 8
GP+ +NES
Sbjct: 470 GPITYNES 477
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 4 FFNESEF 10
+ NESEF
Sbjct: 384 YLNESEF 390
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 PLFFNESE 9
P+F+ ESE
Sbjct: 968 PMFWMESE 975
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 4 FFNESEF 10
+ NESEF
Sbjct: 388 YLNESEF 394
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 1 GPLFFNES 8
GPLF N +
Sbjct: 289 GPLFINSA 296
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 1 GPLFFNESE 9
G +FF++SE
Sbjct: 201 GGIFFSDSE 209
>sp|VL2_HPV11|MINOR capsid protein L2|Human papillomavirus 11
Query: 1 GPLFFNESEF 10
GP+F S+F
Sbjct: 421 GPVFITGSDF 430
>sp|U61_HHV6U|UNCHARACTERIZED protein U61|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LFFNESE 9
+FFNE+E
Sbjct: 105 IFFNEAE 111
38|SequenceR|195|186|GNWKIGPLFF
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GNWKIGP 7
GN+KIGP
Sbjct: 417 GNYKIGP 423
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 1 GNWKIGP 7
GN++IGP
Sbjct: 405 GNYRIGP 411
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 1 GNWKIGP 7
GN++IGP
Sbjct: 405 GNYRIGP 411
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 WKIGPLF 9
W I PLF
Sbjct: 994 WSINPLF 1000
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 WKIGPLF 9
W I PLF
Sbjct: 1004 WSINPLF 1010
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 WKIGPLF 9
W I PLF
Sbjct: 1004 WSINPLF 1010
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 WKIGPLF 9
W I PLF
Sbjct: 1004 WSINPLF 1010
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 WKIGPLF 9
W I PLF
Sbjct: 1004 WSINPLF 1010
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 WKIGPLF 9
W I PLF
Sbjct: 1004 WSINPLF 1010
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 WKIGPLF 9
W I PLF
Sbjct: 1004 WSINPLF 1010
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 WKIGPLF 9
W I PLF
Sbjct: 994 WSITPLF 1000
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 WKIGPLF 9
W I PLF
Sbjct: 1004 WSIKPLF 1010
>sp|DR7_HHV6U|TRANSACTIVATOR protein DR7|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 WKIGP 7
WK+GP
Sbjct: 311 WKMGP 315
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 2 NWKIGPL 8
NWK+G +
Sbjct: 134 NWKLGTI 140
>sp|GM_HCMVM|ENVELOPE glycoprotein M|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 NWKIGPLFF 10
+W G LFF
Sbjct: 300 SWSFGMLFF 308
>sp|GM_HCMVA|ENVELOPE glycoprotein M|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 NWKIGPLFF 10
+W G LFF
Sbjct: 300 SWSFGMLFF 308
>sp|VEMP_CVHN5|ENVELOPE small membrane protein|Human coronavirus HKU1 (isolate N5)
Query: 3 WKIGPLFF 10
W +G +FF
Sbjct: 11 WYVGQIFF 18
>sp|VEMP_CVHN2|ENVELOPE small membrane protein|Human coronavirus HKU1 (isolate N2)
Query: 3 WKIGPLFF 10
W +G +FF
Sbjct: 11 WYVGQIFF 18
>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 WKIGP 7
WK+GP
Sbjct: 343 WKMGP 347
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 2 NWKIGP 7
N+KIGP
Sbjct: 402 NFKIGP 407
>sp|PG187_VAR67|B1 kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 WKIGPL 8
W +GPL
Sbjct: 16 WVVGPL 21
>sp|PG187_VACCC|B1 kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 WKIGPL 8
W +GPL
Sbjct: 16 WVVGPL 21
>sp|PG187_VACCA|B1 kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 WKIGPL 8
W +GPL
Sbjct: 16 WVVGPL 21
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 KIGPLF 9
K+GP+F
Sbjct: 4546 KLGPIF 4551
>sp|PG187_MONPV|B1 kinase|Monkeypox virus (MPXV)
Query: 3 WKIGPL 8
W +GPL
Sbjct: 16 WVVGPL 21
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 KIGPLF 9
K+GP+F
Sbjct: 4634 KLGPIF 4639
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 KIGPLF 9
K+GP+F
Sbjct: 4604 KLGPIF 4609
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 KIGPLF 9
K+GP+F
Sbjct: 4584 KLGPIF 4589
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 GNWKIGPL 8
G+W I P+
Sbjct: 481 GSWVIAPV 488
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 GNWKIGP 7
G W GP
Sbjct: 2498 GGWAAGP 2504
>sp|DR6_HHV6Z|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6B (strain Z29)
Query: 3 WKIGP 7
W++GP
Sbjct: 346 WRMGP 350
39|SequenceR|200|191|ALGLIGNWKI
>sp|VP24_EBORR|MEMBRANE-ASSOCIATED protein VP24|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 ALGLIGNW 8
ALGLI +W
Sbjct: 118 ALGLISDW 125
>sp|VP24_EBORE|MEMBRANE-ASSOCIATED protein VP24|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 ALGLIGNW 8
ALGLI +W
Sbjct: 118 ALGLISDW 125
>sp|VP24_EBOZ5|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 ALGLIGNW 8
ALGLI +W
Sbjct: 118 ALGLISDW 125
>sp|VP24_EBOZM|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 ALGLIGNW 8
ALGLI +W
Sbjct: 118 ALGLISDW 125
>sp|VP24_EBOG4|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 ALGLIGNW 8
ALGLI +W
Sbjct: 118 ALGLISDW 125
>sp|NEF_HV2ST|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 GLIGNWK 9
G+IG+W+
Sbjct: 150 GIIGDWQ 156
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 5 IGNWK 9
+GNWK
Sbjct: 437 VGNWK 441
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 LIGNW 8
L+GNW
Sbjct: 275 LVGNW 279
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 4 LIGNW 8
L+GNW
Sbjct: 275 LVGNW 279
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 4 LIGNW 8
L+GNW
Sbjct: 275 LVGNW 279
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 LIGNW 8
L+GNW
Sbjct: 275 LVGNW 279
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 4 LIGNW 8
L+GNW
Sbjct: 275 LVGNW 279
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 4 LIGNW 8
L+GNW
Sbjct: 275 LVGNW 279
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 3 GLIGNWKI 10
G GNW I
Sbjct: 302 GTFGNWLI 309
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 3 GLIGNWKI 10
G GNW I
Sbjct: 305 GTFGNWLI 312
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 ALGLIGNWKI 10
A+G+ G+W I
Sbjct: 476 AIGVWGSWVI 485
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 2 LGLIGN 7
LGL+GN
Sbjct: 1035 LGLVGN 1040
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 ALGLIG 6
ALGLIG
Sbjct: 53 ALGLIG 58
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 ALGLIG 6
ALGLIG
Sbjct: 53 ALGLIG 58
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 ALGLIGNW 8
A GL+ W
Sbjct: 2320 AFGLVAEW 2327
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 ALGLIGNW 8
A GL+ W
Sbjct: 2320 AFGLVAEW 2327
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 6 GNWK 9
GNWK
Sbjct: 438 GNWK 441
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 6 GNWK 9
GNWK
Sbjct: 438 GNWK 441
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 6 GNWK 9
GNWK
Sbjct: 432 GNWK 435
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 6 GNWK 9
GNWK
Sbjct: 435 GNWK 438
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate
Query: 1 ALGLIGNW 8
+LGLI W
Sbjct: 62 SLGLINRW 69
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 ALGLIGNW 8
+LGLI W
Sbjct: 62 SLGLINRW 69
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 LIGNW 8
++GNW
Sbjct: 364 MVGNW 368
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 ALGLIGNW 8
+LGLI W
Sbjct: 62 SLGLINRW 69
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 LIGNW 8
++GNW
Sbjct: 364 MVGNW 368
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 LIGNW 8
++GNW
Sbjct: 364 MVGNW 368
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 LIGNW 8
++GNW
Sbjct: 364 MVGNW 368
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 LIGNW 8
++GNW
Sbjct: 364 MVGNW 368
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 LIGNW 8
++GNW
Sbjct: 364 MVGNW 368
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 LIGNW 8
++GNW
Sbjct: 364 MVGNW 368
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 LGLIGNW 8
++GNW
Sbjct: 362 FSMVGNW 368
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 LGLIGNW 8
++GNW
Sbjct: 362 FSMVGNW 368
>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 2 LGLIGNWK 9
LG+I W+
Sbjct: 24 LGVIDTWR 31
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 LGLIGNW 8
++GNW
Sbjct: 362 FSMVGNW 368
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 LIGNW 8
++GNW
Sbjct: 364 MVGNW 368
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 4 LIGNW 8
++GNW
Sbjct: 364 MVGNW 368
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 4 LIGNW 8
++GNW
Sbjct: 364 MVGNW 368
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 ALGLIGNW 8
ALG G+W
Sbjct: 544 ALGRQGSW 551
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 ALGLIGNW 8
ALG G+W
Sbjct: 546 ALGRQGSW 553
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 4 LIGNW 8
++GNW
Sbjct: 364 MVGNW 368
40|SequenceR|205|196|ALTAYALGLI
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 TAYALGLI 10
TAY LG++
Sbjct: 406 TAYTLGMM 413
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 LTAYALGLI 10
LT Y LGL+
Sbjct: 2115 LTPYNLGLL 2123
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 LTAYALGLI 10
LT Y LGL+
Sbjct: 2115 LTPYNLGLL 2123
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 LTAYALGL 9
LTA ALGL
Sbjct: 1009 LTAPALGL 1016
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 LTAYALGL 9
LTA ALGL
Sbjct: 1009 LTAPALGL 1016
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 LTAYALGL 9
LTA ALGL
Sbjct: 1009 LTAPALGL 1016
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1087 SQYALGII 1094
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1086 SQYALGII 1093
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1081 SQYALGII 1088
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1087 SQYALGII 1094
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1079 SQYALGII 1086
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1084 SQYALGII 1091
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1083 SQYALGII 1090
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1083 SQYALGII 1090
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1087 SQYALGII 1094
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1085 SQYALGII 1092
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1083 SQYALGII 1090
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1086 SQYALGII 1093
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1081 SQYALGII 1088
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1092 SQYALGII 1099
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1091 SQYALGII 1098
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1085 SQYALGII 1092
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1086 SQYALGII 1093
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1090 SQYALGII 1097
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1086 SQYALGII 1093
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1090 SQYALGII 1097
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1086 SQYALGII 1093
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1098 SQYALGII 1105
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1086 SQYALGII 1093
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1098 SQYALGII 1105
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1098 SQYALGII 1105
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1088 SQYALGII 1095
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1086 SQYALGII 1093
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1081 SQYALGII 1088
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1081 SQYALGII 1088
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1081 SQYALGII 1088
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1082 SQYALGII 1089
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TAYALGLI 10
+ YALG+I
Sbjct: 1086 SQYALGII 1093
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 3 TAYALGL 9
TAY LG+
Sbjct: 439 TAYCLGI 445
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 TAYALGL 9
TAY LG+
Sbjct: 439 TAYCLGI 445
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 ALTAYALGL 9
ALTAY L +
Sbjct: 1674 ALTAYCLSV 1682
41|SequenceR|210|201|SSSPKALTAY
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 SSPKALTAY 10
SSP A+TAY
Sbjct: 1478 SSPDAVTAY 1486
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 SSPKALTAY 10
SSP A+TAY
Sbjct: 1478 SSPDAVTAY 1486
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 SSPKALTAY 10
SSP A+T Y
Sbjct: 1454 SSPDAVTTY 1462
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 SSPKALTAY 10
SSP A+T Y
Sbjct: 1454 SSPDAVTTY 1462
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 SSPKALTA 9
S+PK LTA
Sbjct: 890 SAPKRLTA 897
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 SSPKALTA 9
S PKAL A
Sbjct: 830 SGPKALAA 837
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 SSPKALTAY 10
+SP+ LTA+
Sbjct: 923 TSPEELTAF 931
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 2 SSPKALTAY 10
+SP+ LTA+
Sbjct: 923 TSPEELTAF 931
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 2 SSPKALTAY 10
+SP+ LTA+
Sbjct: 923 TSPEELTAF 931
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 SSPKALT 8
S PKALT
Sbjct: 309 SGPKALT 315
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 SSPKALT 8
S PKALT
Sbjct: 312 SGPKALT 318
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 3 SPKALTAY 10
SP+ LT Y
Sbjct: 354 SPEILTGY 361
42|SequenceR|215|206|FFTELSSSPK
>sp|PAP1_YLDV|POLY(A) polymerase catalytic subunit|Yaba-like disease virus (YLDV)
Query: 1 FFTELSSSP 9
FF+E+ SSP
Sbjct: 54 FFSEIKSSP 62
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 1 FFTELSSSP 9
F T+LS+SP
Sbjct: 340 FLTKLSNSP 348
>sp|UL38_HCMVA|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 TELSSSP 9
+ELSSSP
Sbjct: 299 SELSSSP 305
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 1 FFTELSSS 8
FF LSSS
Sbjct: 607 FFARLSSS 614
>sp|UL38_HCMVM|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 TELSSSP 9
+ELSSSP
Sbjct: 299 SELSSSP 305
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 2 FTELSSS 8
FT++SSS
Sbjct: 210 FTDMSSS 216
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 FTELSSS 8
FT++SSS
Sbjct: 210 FTDMSSS 216
43|SequenceR|220|211|TVLSDFFTEL
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 VLSDFFTEL 10
V+SD+FT+L
Sbjct: 990 VISDYFTQL 998
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 TVLSDFFTEL 10
TVLSDF T L
Sbjct: 1984 TVLSDFKTWL 1993
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 TVLSDFFTEL 10
TVLSDF T L
Sbjct: 1991 TVLSDFKTWL 2000
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TVLSDFFTEL 10
TVLSDF T L
Sbjct: 1986 TVLSDFKTWL 1995
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 LSDFFTEL 10
L +FFTEL
Sbjct: 2123 LPEFFTEL 2130
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 DFFTEL 10
DFF+EL
Sbjct: 1725 DFFSEL 1730
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 5 DFFTEL 10
DFF+EL
Sbjct: 1698 DFFSEL 1703
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 5 DFFTEL 10
DFF+EL
Sbjct: 1703 DFFSEL 1708
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 TVLSDF 6
TVLSDF
Sbjct: 1988 TVLSDF 1993
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 TVLSDF 6
TVLSDF
Sbjct: 1990 TVLSDF 1995
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 TVLSDF 6
TVLSDF
Sbjct: 1990 TVLSDF 1995
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 TVLSDF 6
TVLSDF
Sbjct: 1991 TVLSDF 1996
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TVLSDFFTEL 10
TVL+DF T L
Sbjct: 1986 TVLTDFKTWL 1995
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TVLSDFFTEL 10
TVL+DF T L
Sbjct: 1986 TVLTDFKTWL 1995
Query: 5 DFFTEL 10
+FFTEL
Sbjct: 2120 EFFTEL 2125
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TVLSDFFTEL 10
TVL+DF T L
Sbjct: 1986 TVLTDFKTWL 1995
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TVLSDFFTEL 10
TVL+DF T L
Sbjct: 1986 TVLTDFKTWL 1995
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TVLSDFFTEL 10
TVL+DF T L
Sbjct: 1986 TVLTDFKTWL 1995
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TVLSDFFTEL 10
TVL+DF T L
Sbjct: 1986 TVLADFKTWL 1995
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 3 LSDFFTEL 10
LSDFF +L
Sbjct: 1931 LSDFFRDL 1938
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 5 DFFTEL 10
+FFTEL
Sbjct: 2128 EFFTEL 2133
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 5 DFFTEL 10
+FFTEL
Sbjct: 2121 EFFTEL 2126
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 DFFTEL 10
+FFTEL
Sbjct: 2120 EFFTEL 2125
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 5 DFFTEL 10
+FFTEL
Sbjct: 2121 EFFTEL 2126
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 5 DFFTEL 10
+FFTEL
Sbjct: 2120 EFFTEL 2125
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 5 DFFTEL 10
+FFTEL
Sbjct: 2120 EFFTEL 2125
>sp|PG108_VACCC|ENVELOPE protein H3|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 SDFFTEL 10
S+FFTEL
Sbjct: 107 SNFFTEL 113
>sp|PG108_VAR67|ENVELOPE protein H3|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 SDFFTEL 10
S FFTEL
Sbjct: 108 SKFFTEL 114
44|SequenceR|225|216|PINAQTVLSD
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 PINAQTVLS 9
PIN TVLS
Sbjct: 1623 PINTDTVLS 1631
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 PINAQTVLS 9
PIN TVLS
Sbjct: 1623 PINTDTVLS 1631
45|SequenceR|230|221|MSFVNPINAQ
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 MSFVNPINA 9
++FV PIN+
Sbjct: 320 LTFVTPINS 328
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 MSFVNPINA 9
++FV PIN+
Sbjct: 320 LTFVTPINS 328
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 MSFVNPINA 9
++FV PIN+
Sbjct: 320 LTFVTPINS 328
>sp|NSP3_ROTHP|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 1 MSFVNPINA 9
+ +NPINA
Sbjct: 266 IDLINPINA 274
>sp|NSP3_ROTHK|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 1 MSFVNPINA 9
+ +NPINA
Sbjct: 269 IDLINPINA 277
>sp|NSP3_ROTHT|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 1 MSFVNPINA 9
+ +NPINA
Sbjct: 269 IDLINPINA 277
>sp|NSP3_ROTAD|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 1 MSFVNPINA 9
+ +NPINA
Sbjct: 266 IDLINPINA 274
>sp|NSP3_ROTAM|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 1 MSFVNPINA 9
+ +NPINA
Sbjct: 266 IDLINPINA 274
>sp|NSP3_ROT41|NON-STRUCTURAL protein 3|Rotavirus A (isolate
Query: 4 VNPINA 9
+NPINA
Sbjct: 272 INPINA 277
>sp|NSP3_ROTHW|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 4 VNPINA 9
+NPINA
Sbjct: 272 INPINA 277
>sp|NSP3_ROTH7|NON-STRUCTURAL protein 3|Rotavirus A (isolate RVA/Human/United
Query: 4 VNPINA 9
+NPINA
Sbjct: 269 INPINA 274
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 FVNPINAQ 10
F++P N+Q
Sbjct: 5807 FISPYNSQ 5814
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 FVNPINAQ 10
F++P N+Q
Sbjct: 5812 FISPYNSQ 5819
>sp|NSP3_ROTHS|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4])
Query: 1 MSFVNPINA 9
+ +NP+NA
Sbjct: 269 IDLINPVNA 277
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 FVNPINAQ 10
F++P N+Q
Sbjct: 5895 FISPYNSQ 5902
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 FVNPINAQ 10
F++P N+Q
Sbjct: 5507 FISPYNSQ 5514
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 NPINA 9
NPINA
Sbjct: 828 NPINA 832
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 FVNPINAQ 10
F++P N+Q
Sbjct: 5865 FISPYNSQ 5872
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 FVNPINAQ 10
F++P N+Q
Sbjct: 5835 FISPYNSQ 5842
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 FVNPINAQ 10
F++P N+Q
Sbjct: 5821 FISPYNSQ 5828
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 FVNPINAQ 10
F++P N+Q
Sbjct: 5845 FISPYNSQ 5852
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 NPINA 9
NPINA
Sbjct: 828 NPINA 832
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 1 MSFVNPINA 9
+SFVN +NA
Sbjct: 444 VSFVNHLNA 452
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 NPINA 9
NPINA
Sbjct: 828 NPINA 832
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 FVNPINAQ 10
F++P N+Q
Sbjct: 5482 FISPYNSQ 5489
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 NPINA 9
NPINA
Sbjct: 828 NPINA 832
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 NPINA 9
NPINA
Sbjct: 828 NPINA 832
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 NPINA 9
NPINA
Sbjct: 828 NPINA 832
>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57
Query: 2 SFVNPI 7
SFVNP+
Sbjct: 156 SFVNPL 161
>sp|NSP3_ROTH6|NON-STRUCTURAL protein 3|Rotavirus A (strain
Query: 4 VNPINA 9
+NP+NA
Sbjct: 272 INPVNA 277
>sp|NSP3_ROTHD|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 4 VNPINA 9
+NP+NA
Sbjct: 272 INPVNA 277
>sp|NSP3_ROTHL|NON-STRUCTURAL protein 3|Rotavirus A (strain
Query: 4 VNPINA 9
+NP+NA
Sbjct: 272 INPVNA 277
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 3 FVNPIN 8
F+NPI+
Sbjct: 179 FINPIS 184
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 FVNPIN 8
F+NPI+
Sbjct: 179 FINPIS 184
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 FVNPIN 8
F+NPI+
Sbjct: 179 FINPIS 184
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 FVNPIN 8
F+NPI+
Sbjct: 179 FINPIS 184
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 3 FVNPIN 8
F+NPI+
Sbjct: 179 FINPIS 184
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 4 VNPINA 9
+NPIN+
Sbjct: 1027 INPINS 1032
46|SequenceR|235|226|AGCMQMSFVN
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 CMQMSFV 9
C+QM+F+
Sbjct: 119 CVQMTFL 125
>sp|NSP5_ROTHK|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 2 GCMQMSF 8
GC QM F
Sbjct: 104 GCDQMDF 110
>sp|NSP5_ROTAM|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/United
Query: 2 GCMQMSF 8
GC QM F
Sbjct: 104 GCDQMDF 110
>sp|NSP5_ROTHW|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/United
Query: 2 GCMQMSF 8
GC QM F
Sbjct: 104 GCDQMDF 110
>sp|NSP5_ROTAD|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/United
Query: 2 GCMQMSF 8
GC QM F
Sbjct: 104 GCDQMDF 110
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 1 AGCMQMSFVN 10
GCM FV+
Sbjct: 234 GGCMMYCFVS 243
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 1 AGCMQMSFVN 10
GCM FV+
Sbjct: 234 GGCMMYCFVS 243
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 1 AGCMQMSFVN 10
GCM FV+
Sbjct: 234 GGCMMYCFVS 243
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 1 AGCMQMSFVN 10
GCM FV+
Sbjct: 234 GGCMMYCFVS 243
47|SequenceR|240|231|AVPLGAGCMQ
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 2 VPLGAGCM 9
+P+ AGCM
Sbjct: 329 IPIAAGCM 336
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 VPLGAGCM 9
+P+ AGCM
Sbjct: 329 IPIAAGCM 336
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 LGAGC 8
LGAGC
Sbjct: 5230 LGAGC 5234
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 LGAGC 8
LGAGC
Sbjct: 5207 LGAGC 5211
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 LGAGC 8
LGAGC
Sbjct: 5203 LGAGC 5207
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 LGAGC 8
LGAGC
Sbjct: 5241 LGAGC 5245
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 LGAGC 8
LGAGC
Sbjct: 5261 LGAGC 5265
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 LGAGC 8
LGAGC
Sbjct: 5291 LGAGC 5295
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 AVPLGAGC 8
+VP GA C
Sbjct: 6 SVPAGAKC 13
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 AVPLGAGC 8
+VP GA C
Sbjct: 6 SVPAGAKC 13
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 1 AVPLGAGC 8
+VP GA C
Sbjct: 6 SVPAGAKC 13
>sp|SPIKE_ADE1P|FIBER protein|Human adenovirus B serotype 11
Query: 1 AVPLGAG 7
+PLGAG
Sbjct: 96 GLPLGAG 102
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 5 GAGCMQ 10
G GC+Q
Sbjct: 153 GVGCLQ 158
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 VPLGAG 7
+P+GAG
Sbjct: 664 IPIGAG 669
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 VPLGAG 7
+P+GAG
Sbjct: 650 IPIGAG 655
>sp|PG001_VAR67|CHEMOKINE-BINDING protein|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 AVPLGAG 7
+VPLG G
Sbjct: 129 SVPLGQG 135
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 2 VPLGAGC 8
VP GA C
Sbjct: 7 VPAGAKC 13
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 2 VPLGAGC 8
VP GA C
Sbjct: 7 VPAGAKC 13
>sp|E1A_ADE12|EARLY E1A protein|Human adenovirus A serotype 12
Query: 3 PLGAGCM 9
P+G CM
Sbjct: 91 PIGGECM 97
>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 AVPLGAGC 8
VPL GC
Sbjct: 232 GVPLSYGC 239
>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 AVPLGAGC 8
VPL GC
Sbjct: 232 GVPLSYGC 239
>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 AVPLGAGC 8
VPL GC
Sbjct: 232 GVPLSYGC 239
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 3 PLGAGC 8
P G GC
Sbjct: 259 PTGTGC 264
48|SequenceR|245|236|NTGSGAVPLG
>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain
Query: 3 GSGAVPLG 10
GSG++P+G
Sbjct: 88 GSGSLPIG 95
>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains
Query: 3 GSGAVPLG 10
GSG++P+G
Sbjct: 84 GSGSLPIG 91
>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain
Query: 3 GSGAVPLG 10
GSG++P+G
Sbjct: 84 GSGSLPIG 91
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TGSGAVPLG 10
TG+ A+P+G
Sbjct: 251 TGNPAIPVG 259
>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 TGSGAVPLG 10
TG+ A+P+G
Sbjct: 251 TGNPAIPVG 259
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 GSGAVPL 9
GSG +PL
Sbjct: 34 GSGNIPL 40
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 GSGAVPL 9
GSG +PL
Sbjct: 668 GSGIIPL 674
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 2 TGSGAVPL 9
+G+GA P+
Sbjct: 18 SGAGAAPI 25
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 2 TGSGAVPL 9
+G+GA P+
Sbjct: 18 SGAGAAPI 25
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GSGAVP 8
GSG VP
Sbjct: 636 GSGTVP 641
>sp|VL2_HPV49|MINOR capsid protein L2|Human papillomavirus type 49
Query: 2 TGSGAVPLG 10
+GSG P+G
Sbjct: 209 SGSGGQPIG 217
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TGSGAVPLG 10
TG+ VP+G
Sbjct: 247 TGNPPVPVG 255
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TGSGAVPLG 10
TG+ VP+G
Sbjct: 247 TGNPPVPVG 255
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TGSGAVPLG 10
TG+ VP+G
Sbjct: 249 TGNPPVPVG 257
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 3 GSGAVPL 9
GSG +P+
Sbjct: 673 GSGIIPM 679
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 3 GSGAVPL 9
GSG +P+
Sbjct: 673 GSGIIPM 679
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TGSGAVPLG 10
TG+ VP+G
Sbjct: 247 TGNPPVPVG 255
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 GSGAVPL 9
GSG +P+
Sbjct: 673 GSGIIPM 679
49|SequenceR|250|241|VLSGGNTGSG
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 LSGGNTGSG 10
L+GG+ GSG
Sbjct: 2516 LAGGDGGSG 2524
Query: 3 SGGNTGSG 10
+GG TG+G
Sbjct: 1881 AGGQTGAG 1888
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 LSGGNTGSG 10
L GN GSG
Sbjct: 87 LISGNAGSG 95
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas)
Query: 2 LSGGNTGSG 10
L GN GSG
Sbjct: 87 LISGNAGSG 95
>sp|PHOSP_PI3H4|PHOSPHOPROTEIN parainfluenza 3 virus (strain
Query: 1 VLSGGNTGS 9
V+SGG +GS
Sbjct: 122 VVSGGISGS 130
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 LSGGNTGS 9
+SGGN G+
Sbjct: 146 MSGGNQGA 153
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GGNTGSG 10
GGN G+G
Sbjct: 446 GGNRGNG 452
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 5 GNTGSG 10
GN GSG
Sbjct: 96 GNAGSG 101
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 5 GNTGSG 10
GN GSG
Sbjct: 97 GNAGSG 102
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 3 SGGNTGSG 10
SGG G+G
Sbjct: 263 SGGEEGAG 270
>sp|VL2_HPV60|MINOR capsid protein L2|Human papillomavirus type 60
Query: 1 VLSGGNTGSG 10
++ GG++G G
Sbjct: 137 IIVGGDSGPG 146
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 2 LSGGNTGS 9
+SG NTG+
Sbjct: 153 ISGQNTGN 160
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 2 LSGGNTGS 9
+SG NTG+
Sbjct: 153 ISGQNTGN 160
>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)
Query: 2 LSGGNTGS 9
+SG NTG+
Sbjct: 153 ISGQNTGN 160
>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)
Query: 2 LSGGNTGS 9
+SG NTG+
Sbjct: 153 ISGQNTGN 160
>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)
Query: 2 LSGGNTGS 9
+SG NTG+
Sbjct: 153 ISGQNTGN 160
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 2 LSGGNTGS 9
+SG NTG+
Sbjct: 153 ISGQNTGN 160
>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 LSGGNTGS 9
+SG NTG+
Sbjct: 153 ISGQNTGN 160
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 2 LSGGNTGS 9
+SG NTG+
Sbjct: 153 ISGQNTGN 160
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 2 LSGGNTGS 9
+SG NTG+
Sbjct: 153 ISGQNTGN 160
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 2 LSGGNTGS 9
+SG NTG+
Sbjct: 153 ISGQNTGN 160
>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)
Query: 2 LSGGNTGS 9
+SG NTG+
Sbjct: 153 ISGQNTGN 160
>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)
Query: 2 LSGGNTGS 9
+SG NTG+
Sbjct: 153 ISGQNTGN 160
>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 2 LSGGNTGS 9
+SG NTG+
Sbjct: 153 ISGQNTGN 160
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 2 LSGGNTGS 9
+SG NTG+
Sbjct: 153 ISGQNTGN 160
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 LSGGNTGS 9
++GG TGS
Sbjct: 330 MAGGITGS 337
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 LSGGNTGS 9
++GG TGS
Sbjct: 330 MAGGITGS 337
50|SequenceR|255|246|EIGGLVLSGG
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 EIGGLVLSG 9
E GLVLSG
Sbjct: 686 EASGLVLSG 694
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 EIGGLVLSG 9
E GLVLSG
Sbjct: 686 EASGLVLSG 694
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 EIGGLVLSGG 10
++ G+++SGG
Sbjct: 1053 QVRGIIVSGG 1062
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 EIGGLVLSGG 10
++ G+++SGG
Sbjct: 1053 QVRGIIVSGG 1062
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 EIGGLVLSG 9
E GLVL+G
Sbjct: 680 EASGLVLTG 688
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 EIGGLVLSG 9
E GLVL+G
Sbjct: 680 EASGLVLTG 688
>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain
Query: 3 GGLVLSG 9
GLVLSG
Sbjct: 206 AGLVLSG 212
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GGLVLS 8
GGL+LS
Sbjct: 104 GGLILS 109
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 2 IGGLVLS 8
+GG+VLS
Sbjct: 477 LGGVVLS 483
51|SequenceR|260|251|KYLSPEIGGL
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 1 KYLSPEIGGL 10
K LSP +GGL
Sbjct: 104 KELSPRLGGL 113
>sp|IL10H_EBVG|VIRAL interleukin-10 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 YLSPEIGG 9
YL+PE GG
Sbjct: 16 YLAPECGG 23
>sp|IL10H_EBVB9|VIRAL interleukin-10 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 YLSPEIGG 9
YL+PE GG
Sbjct: 16 YLAPECGG 23
>sp|IL10H_EBVA8|VIRAL interleukin-10 homolog|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 YLSPEIGG 9
YL+PE GG
Sbjct: 16 YLAPECGG 23
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 YLSPEIGGL 10
YL P IGG+
Sbjct: 869 YLDPSIGGV 877
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 YLSPEIGGL 10
YL P IGG+
Sbjct: 869 YLDPSIGGV 877
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 YLSPEIGGL 10
YL P IGG+
Sbjct: 879 YLDPSIGGV 887
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 YLSPEIGGL 10
YL P IGG+
Sbjct: 879 YLDPSIGGV 887
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 YLSPEIGGL 10
YL P IGG+
Sbjct: 879 YLDPSIGGV 887
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 YLSPEIGGL 10
YL P IGG+
Sbjct: 879 YLDPSIGGV 887
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 YLSPEIGGL 10
YL P IGG+
Sbjct: 879 YLDPSIGGV 887
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 YLSPEIGGL 10
YL P IGG+
Sbjct: 879 YLDPSIGGV 887
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 YLSPEIGG 9
YL P IGG
Sbjct: 879 YLDPSIGG 886
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 3 LSPEIGGL 10
LSP +GGL
Sbjct: 106 LSPRLGGL 113
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 YLSPEIGGL 10
YL P +GG+
Sbjct: 893 YLDPSLGGI 901
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 YLSPEIGGL 10
YL P +GG+
Sbjct: 893 YLDPSLGGV 901
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 YLSPEIGGL 10
YL P +GG+
Sbjct: 893 YLDPSLGGV 901
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 2 YLSPEIGGL 10
YL P +GG+
Sbjct: 894 YLDPSLGGV 902
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 YLSPEIGGL 10
YL P +GG+
Sbjct: 893 YLDPSLGGV 901
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 KYLSPEIG 8
K+ SPE+G
Sbjct: 1918 KFFSPELG 1925
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 YLSPEIGGL 10
YL P +GG+
Sbjct: 893 YLDPSLGGV 901
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 YLSPEIGGL 10
YL P +GG+
Sbjct: 893 YLDPSLGGV 901
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 YLSPEIGGL 10
YL P +GG+
Sbjct: 893 YLDPSLGGV 901
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 2 YLSPEIGGL 10
YL P +GG+
Sbjct: 893 YLDPSLGGV 901
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 YLSPEIGGL 10
YL P +GG+
Sbjct: 893 YLDPSLGGV 901
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 YLSPEIGGL 10
YL P +GG+
Sbjct: 894 YLDPSLGGV 902
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 YLSPEIGGL 10
YL P +GG+
Sbjct: 893 YLDPSLGGV 901
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 KYLSPEIGGL 10
K+ P++GGL
Sbjct: 1632 KWKFPQVGGL 1641
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 KYLSPEIGGL 10
K+ P++GGL
Sbjct: 1632 KWKFPQVGGL 1641
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 YLSPEI 7
YL+PEI
Sbjct: 229 YLTPEI 234
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 1 KYLSPE 6
KYLSP+
Sbjct: 79 KYLSPQ 84
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 1 KYLSPE 6
KYLSP+
Sbjct: 78 KYLSPK 83
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 KYLSPE 6
KYLSP+
Sbjct: 80 KYLSPK 85
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 1 KYLSPE 6
KYLSP+
Sbjct: 78 KYLSPK 83
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 1 KYLSPE 6
KYLSP+
Sbjct: 78 KYLSPK 83
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 1 KYLSPE 6
KYLSP+
Sbjct: 78 KYLSPK 83
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 1 KYLSPE 6
KYLSP+
Sbjct: 78 KYLSPK 83
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 1 KYLSPE 6
KYLSP+
Sbjct: 78 KYLSPK 83
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 1 KYLSPE 6
KYLSP+
Sbjct: 78 KYLSPK 83
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 KYLSPE 6
KYLSP+
Sbjct: 80 KYLSPK 85
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 YLSPEI 7
YL PEI
Sbjct: 2037 YLQPEI 2042
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 YLSPEI 7
YL PEI
Sbjct: 2041 YLKPEI 2046
>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)
Query: 3 LSPEIGG 9
L+P IGG
Sbjct: 139 LAPHIGG 145
>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human
Query: 3 LSPEIGG 9
L+P IGG
Sbjct: 139 LAPHIGG 145
>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)
Query: 3 LSPEIGG 9
L+P IGG
Sbjct: 139 LAPHIGG 145
>sp|VP1_POVJC|MAJOR capsid protein VP1|JC polyomavirus (JCPyV) (JCV)
Query: 2 YLSPEIG 8
+L+PE+G
Sbjct: 43 FLTPEMG 49
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 KYLSPEIG 8
KYL P++
Sbjct: 572 KYLRPDVA 579
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 1 KYLSPE 6
KY+SP+
Sbjct: 82 KYISPQ 87
>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)
Query: 3 LSPEIGG 9
L+P IGG
Sbjct: 139 LAPHIGG 145
>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)
Query: 3 LSPEIGG 9
L+P IGG
Sbjct: 139 LAPHIGG 145
>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)
Query: 3 LSPEIGG 9
L+P IGG
Sbjct: 140 LAPHIGG 146
>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)
Query: 3 LSPEIGG 9
L+P IGG
Sbjct: 140 LAPHIGG 146
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 2 YLSPEIGG 9
YL E+GG
Sbjct: 752 YLEIEVGG 759
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 2 YLSPEIGG 9
YL E+GG
Sbjct: 752 YLEIEVGG 759
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 2 YLSPEIGG 9
YL E+GG
Sbjct: 752 YLEIEVGG 759
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 2 YLSPEIGG 9
YL E+GG
Sbjct: 752 YLEIEVGG 759
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 2 YLSPEIGG 9
YL E+GG
Sbjct: 757 YLEIEVGG 764
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 2 YLSPEIGG 9
YL E+GG
Sbjct: 757 YLEIEVGG 764
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 LSPEIG 8
+SPEIG
Sbjct: 40 ISPEIG 45
52|SequenceR|265|256|YWIDGKYLSP
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 YWIDGK 6
+WIDGK
Sbjct: 179 FWIDGK 184
Query: 2 WIDGKYLS 9
W +GK+LS
Sbjct: 195 WTEGKFLS 202
>sp|PG148_VARV|DNA polymerase processivity factor component|Variola virus
Query: 1 YWIDGKYLS 9
Y+++GKY S
Sbjct: 301 YYVNGKYFS 309
>sp|PG148_VAR67|DNA polymerase processivity factor component|Variola virus (isolate
Query: 1 YWIDGKYLS 9
Y+++GKY S
Sbjct: 301 YYVNGKYFS 309
>sp|PG148_VACCC|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 1 YWIDGKYLS 9
Y+++GKY S
Sbjct: 301 YYVNGKYFS 309
>sp|PG148_MONPV|DNA polymerase processivity factor component|Monkeypox virus (MPXV)
Query: 1 YWIDGKYLS 9
Y+++GKY S
Sbjct: 301 YYVNGKYFS 309
>sp|A20_VACCA|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 1 YWIDGKYLS 9
Y+++GKY S
Sbjct: 301 YYVNGKYFS 309
>sp|VE2_HPV34|REGULATORY protein E2|Human papillomavirus type 34
Query: 1 YWIDGKY 7
YW++GK+
Sbjct: 140 YWLEGKW 146
>sp|VE2_HPV52|REGULATORY protein E2|Human papillomavirus 52
Query: 1 YWIDGK 6
YW DG+
Sbjct: 159 YWCDGE 164
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 YWIDGKY 7
+W+DG +
Sbjct: 725 HWMDGTF 731
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 1 YWIDGKY 7
+W+DG +
Sbjct: 725 HWMDGTF 731
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YWIDGKYLS 9
Y+I +YLS
Sbjct: 567 YYIPSRYLS 575
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 YWIDGKYLS 9
Y+I +YLS
Sbjct: 567 YYIPSRYLS 575
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 1 YWIDGKYLS 9
Y+I +YLS
Sbjct: 567 YYIPSRYLS 575
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 YWIDGKY 7
+W+DG +
Sbjct: 726 HWMDGTF 732
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 WIDGKYLSP 10
++DG LSP
Sbjct: 954 YVDGGGLSP 962
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 YWIDGKYLSP 10
Y+I Y+SP
Sbjct: 199 YFIPHDYISP 208
>sp|SHDAG_HDVM2|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 2 WIDGK 6
W+DG+
Sbjct: 20 WVDGR 24
>sp|SHDAG_HDVM1|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 2 WIDGK 6
W+DG+
Sbjct: 20 WVDGR 24
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 1 YWIDGKYL 8
Y +DG YL
Sbjct: 604 YDVDGNYL 611
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 YWIDGKYL 8
Y +DG YL
Sbjct: 604 YDVDGNYL 611
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YWIDGKYL 8
Y +DG YL
Sbjct: 604 YDVDGNYL 611
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 1 YWIDGKYL 8
Y +DG YL
Sbjct: 604 YDVDGNYL 611
>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)
Query: 1 YWIDGKYL 8
Y +DG YL
Sbjct: 604 YDVDGNYL 611
>sp|TOP1_VACCC|DNA topoisomerase 1B|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YWIDGKYLSP 10
+W + K +SP
Sbjct: 235 FWTNVKSISP 244
>sp|TOP1_VACCA|DNA topoisomerase 1B|Vaccinia virus (strain Ankara) (VACV)
Query: 1 YWIDGKYLSP 10
+W + K +SP
Sbjct: 235 FWTNVKSISP 244
>sp|TOP1_VAR67|DNA topoisomerase 1|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 YWIDGKYLSP 10
+W + K +SP
Sbjct: 235 FWTNVKSISP 244
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 2 WIDGKYLSP 10
W+ G Y P
Sbjct: 111 WLGGTYSRP 119
>sp|VPX_HV2G1|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 1 YWIDGKYLSP 10
YW D + +SP
Sbjct: 55 YWHDDQGMSP 64
>sp|LHDAG_HDVM1|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 2 WIDGK 6
W+DG+
Sbjct: 20 WVDGR 24
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 WIDGKYLS 9
W+DG+ S
Sbjct: 2085 WLDGRITS 2092
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 1 YWIDGKYLS 9
+W+ KY+S
Sbjct: 76 HWLKRKYIS 84
>sp|LHDAG_HDVM2|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 2 WIDGK 6
W+DG+
Sbjct: 20 WVDGR 24
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 1 YWIDGK 6
+W DG+
Sbjct: 721 HWFDGR 726
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 1 YWIDG 5
YW DG
Sbjct: 412 YWDDG 416
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 2 WIDGKYLSP 10
W D + L+P
Sbjct: 388 WTDSEALAP 396
53|SequenceR|270|261|EKIPTYWIDG
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 EKIPTYWIDG 10
EK+ TY+ DG
Sbjct: 1045 EKVETYYTDG 1054
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 EKIPTY 6
EKIPTY
Sbjct: 631 EKIPTY 636
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 EKIPTY 6
EKIPTY
Sbjct: 1962 EKIPTY 1967
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 IPTYWIDG 10
+PT W++G
Sbjct: 462 VPTIWLEG 469
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 4 PTYWIDG 10
P Y+IDG
Sbjct: 566 PLYYIDG 572
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWRDG 440
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I01A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|RDRP_I01A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 TYWIDG 10
TYW DG
Sbjct: 435 TYWWDG 440
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 1 EKIPTYWI 8
E++ TYW+
Sbjct: 155 EQLTTYWL 162
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 1 EKIPTYWI 8
E++ TYW+
Sbjct: 154 EQLTTYWL 161
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 EKIPTYWIDG 10
+ + +WIDG
Sbjct: 174 QHVSWFWIDG 183
>sp|E3B14_ADE07|EARLY E3B 14.9 kDa protein|Human adenovirus B serotype 7
Query: 4 PTYWI 8
PTYWI
Sbjct: 52 PTYWI 56
>sp|E3B14_ADE03|EARLY E3B 14.5 kDa protein|Human adenovirus B serotype 3
Query: 4 PTYWI 8
PTYWI
Sbjct: 52 PTYWI 56
>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV
Query: 4 PTYWID 9
P+YW++
Sbjct: 309 PSYWLE 314
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
Query: 4 PTYWI 8
P+YWI
Sbjct: 289 PSYWI 293
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 4 PTYWI 8
P+YWI
Sbjct: 289 PSYWI 293
>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 4 PTYWI 8
P+YWI
Sbjct: 289 PSYWI 293
>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 4 PTYWI 8
P+YWI
Sbjct: 289 PSYWI 293
>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])
Query: 4 PTYWI 8
P+YWI
Sbjct: 289 PSYWI 293
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 3 IPTYWID 9
I TYW++
Sbjct: 638 IQTYWVN 644
>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])
Query: 4 PTYWI 8
P+YWI
Sbjct: 289 PSYWI 293
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 4 PTYWI 8
P+YWI
Sbjct: 289 PSYWI 293
>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)
Query: 4 PTYWI 8
P+YWI
Sbjct: 289 PSYWI 293
>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])
Query: 4 PTYWI 8
P+YWI
Sbjct: 289 PSYWI 293
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 4 PTYWI 8
P+YWI
Sbjct: 289 PSYWI 293
>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])
Query: 4 PTYWI 8
P+YWI
Sbjct: 289 PSYWI 293
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 4 PTYWID 9
P+YW++
Sbjct: 309 PSYWLE 314
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 4 PTYWID 9
PTYW +
Sbjct: 200 PTYWTE 205
>sp|U131A_HCMVM|PROTEIN UL131A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 KIPTYW 7
++P YW
Sbjct: 32 RVPHYW 37
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 KIPTYW 7
++PT+W
Sbjct: 63 QVPTHW 68
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 KIPTYW 7
++PT+W
Sbjct: 63 QVPTHW 68
>sp|DUT_HHV11|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 1 (strain 17)
Query: 3 IPTYWIDG 10
+PT W+ G
Sbjct: 271 VPTRWLPG 278
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 KIPTYW 7
++PT+W
Sbjct: 63 QVPTHW 68
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 1 EKIPTYWID 9
+ IP W+D
Sbjct: 6 QSIPFAWLD 14
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 1 EKIPTYWID 9
+ IP W+D
Sbjct: 6 QSIPFAWLD 14
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 1 EKIPTYWIDG 10
++IP +IDG
Sbjct: 456 KEIPKKFIDG 465
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 TYWIDG 10
TY+IDG
Sbjct: 1026 TYYIDG 1031
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 3 IPTYWIDG 10
+P Y +DG
Sbjct: 1628 LPKYHVDG 1635
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 IPTYWI 8
+PTY+I
Sbjct: 966 LPTYYI 971
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 IPTYWI 8
+PTY+I
Sbjct: 966 LPTYYI 971
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 EKIPTYWIDG 10
E + TY+ DG
Sbjct: 1043 EGVETYYTDG 1052
>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])
Query: 4 PTYWI 8
P+YWI
Sbjct: 289 PSYWI 293
>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)
Query: 4 PTYWI 8
P+YWI
Sbjct: 289 PSYWI 293
>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
Query: 4 PTYWI 8
P+YWI
Sbjct: 289 PSYWI 293
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 EKIPTYWIDG 10
E TY++DG
Sbjct: 1023 EGAETYYVDG 1032
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 3 IPTYW 7
+PT+W
Sbjct: 44 LPTHW 48
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 1 EKIPTYWIDG 10
++IP ++ DG
Sbjct: 455 KRIPYFFTDG 464
>sp|PG037_VAR67|INHIBITOR of Apoptosis OPG037|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 KIPTYWIDG 10
K P Y++ G
Sbjct: 106 KTPLYYLSG 114
>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KIPTYWIDG 10
K P Y++ G
Sbjct: 132 KTPLYYLSG 140
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 2 KIPTYWIDG 10
K P Y++ G
Sbjct: 102 KTPLYYLSG 110
>sp|VE2_HPV52|REGULATORY protein E2|Human papillomavirus 52
Query: 6 YWIDG 10
YW DG
Sbjct: 159 YWCDG 163
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 TYWIDG 10
TY++DG
Sbjct: 1024 TYYVDG 1029
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 TYWIDG 10
TY++DG
Sbjct: 1026 TYYVDG 1031
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 TYWIDG 10
TY++DG
Sbjct: 1036 TYYVDG 1041
>sp|VL2_HPV70|MINOR capsid protein L2|Human papillomavirus type 70
Query: 1 EKIPTYWIDG 10
++IP ++ DG
Sbjct: 453 KRIPYFFTDG 462
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 TYWIDG 10
TY++DG
Sbjct: 1025 TYYVDG 1030
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 4 PTYWI 8
PT+W+
Sbjct: 976 PTFWM 980
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 PTYWI 8
PT+W+
Sbjct: 976 PTFWM 980
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 4 PTYWI 8
PT+W+
Sbjct: 976 PTFWM 980
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 PTYWI 8
PT+W+
Sbjct: 976 PTFWM 980
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 4 PTYWI 8
PT+W+
Sbjct: 976 PTFWM 980
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 4 PTYWI 8
PT+W+
Sbjct: 976 PTFWM 980
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 4 PTYWI 8
PT+W+
Sbjct: 976 PTFWM 980
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 4 PTYWI 8
PT+W+
Sbjct: 976 PTFWM 980
>sp|DUT_HCMVA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 4 PTYWIDG 10
PT W+ G
Sbjct: 273 PTIWLPG 279
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 4 PTYWI 8
PT+W+
Sbjct: 976 PTFWM 980
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 4 PTYWI 8
PT+W+
Sbjct: 976 PTFWM 980
>sp|DUT_HCMVM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 4 PTYWIDG 10
PT W+ G
Sbjct: 273 PTIWLPG 279
54|SequenceR|275|266|QYYWEEKIPT
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 YYWEEKIP 9
Y W E++P
Sbjct: 1378 YVWGEEVP 1385
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 2 YYWE 5
YYWE
Sbjct: 45 YYWE 48
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 2 YYWE 5
YYWE
Sbjct: 183 YYWE 186
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 2 YYWE 5
YYWE
Sbjct: 184 YYWE 187
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 4 WEEKIPT 10
WE+KI T
Sbjct: 1482 WEQKIKT 1488
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 YYWE 5
YYWE
Sbjct: 177 YYWE 180
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 YYWE 5
YYWE
Sbjct: 177 YYWE 180
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 QYYWEEKIPT 10
Q ++EE+ PT
Sbjct: 1047 QQHYEEEAPT 1056
Query: 2 YYWEEKIPT 10
+ W +++PT
Sbjct: 1793 FAWNDRMPT 1801
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 3 YWEEKI 8
YWEE++
Sbjct: 103 YWEEEL 108
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 YYWEEKIPT 10
+ W +++PT
Sbjct: 1793 FAWNDRMPT 1801
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 5 EEKIPT 10
+EKIPT
Sbjct: 1574 DEKIPT 1579
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 2 YYWEEKI 8
Y WE+K+
Sbjct: 173 YSWEQKL 179
>sp|PG130_MONPV|39KDA core protein OPG130|Monkeypox virus (MPXV)
Query: 2 YYWEEKIP 9
YY EEK P
Sbjct: 22 YYSEEKDP 29
>sp|PG130_VACCC|39KDA core protein OPG130|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YYWEEKIP 9
YY EEK P
Sbjct: 22 YYSEEKDP 29
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 2 YYWEEKIPT 10
YY+ EK+ T
Sbjct: 521 YYFGEKVKT 529
55|SequenceR|280|271|KLIEIQYYWE
>sp|VC17_VACCC|ANKYRIN repeat protein C17/B23|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 IEIQYYW 9
+ IQYYW
Sbjct: 252 LPIQYYW 258
>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /
Query: 3 IEIQYYW 9
+ IQYYW
Sbjct: 238 LPIQYYW 244
>sp|HEMA_I86A0|HEMAGGLUTININ A virus (strain A/Taiwan/1/1986
Query: 5 IQYYW 9
I YYW
Sbjct: 244 INYYW 248
>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007
Query: 5 IQYYW 9
I YYW
Sbjct: 243 INYYW 247
>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus
Query: 1 KLIEIQY 7
KL+E+QY
Sbjct: 221 KLVELQY 227
>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006
Query: 5 IQYYW 9
I YYW
Sbjct: 243 INYYW 247
>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New
Query: 5 IQYYW 9
I YYW
Sbjct: 243 INYYW 247
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 1 KLIEIQYY 8
K+I+I YY
Sbjct: 478 KIIDINYY 485
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 1 KLIEIQYY 8
K+I+I YY
Sbjct: 478 KIIDINYY 485
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 1 KLIEIQYY 8
K+I+I YY
Sbjct: 478 KIIDINYY 485
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KLIEIQYY 8
K+I+I YY
Sbjct: 478 KIIDINYY 485
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 KLIEIQYY 8
K+I+I YY
Sbjct: 478 KIIDINYY 485
>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943
Query: 5 IQYYW 9
I YYW
Sbjct: 243 INYYW 247
>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977
Query: 5 IQYYW 9
I YYW
Sbjct: 244 INYYW 248
>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954
Query: 5 IQYYW 9
I YYW
Sbjct: 244 INYYW 248
>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996
Query: 5 IQYYW 9
I YYW
Sbjct: 244 INYYW 248
>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979
Query: 5 IQYYW 9
I YYW
Sbjct: 244 INYYW 248
>sp|HEMA_I80AA|HEMAGGLUTININ A virus (strain A/India/6263/1980
Query: 5 IQYYW 9
I YYW
Sbjct: 244 INYYW 248
>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978
Query: 5 IQYYW 9
I YYW
Sbjct: 244 INYYW 248
>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996
Query: 5 IQYYW 9
I YYW
Sbjct: 243 INYYW 247
>sp|HEMA_I83A1|HEMAGGLUTININ A virus (strain A/Chile/1/1983
Query: 5 IQYYW 9
I YYW
Sbjct: 244 INYYW 248
>sp|VIF_HV2NZ|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 IEIQYYW 9
+EIQ YW
Sbjct: 67 LEIQAYW 73
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 5 IQYYWE 10
+QY WE
Sbjct: 1844 LQYNWE 1849
>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 IEIQYYW 9
+EIQ YW
Sbjct: 67 LEIQAYW 73
>sp|VIF_HV2KR|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 IEIQYYW 9
+EIQ YW
Sbjct: 67 LEIQAYW 73
>sp|VIF_HV2D1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 IEIQYYW 9
+EIQ YW
Sbjct: 67 LEIQAYW 73
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 IEIQYYW 9
+EIQ YW
Sbjct: 67 LEIQAYW 73
>sp|VIF_HV2RO|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 IEIQYYW 9
+EIQ YW
Sbjct: 67 LEIQAYW 73
>sp|VIF_HV2ST|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 IEIQYYW 9
+EIQ YW
Sbjct: 67 LEIQAYW 73
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 LIEIQYY 8
LIE YY
Sbjct: 1355 LIEFHYY 1361
56|SequenceR|285|276|GGIELKLIEI
>sp|VL2_HPV41|MINOR capsid protein L2|Human papillomavirus type 41
Query: 1 GGIELKLIEI 10
GG+++++IE+
Sbjct: 171 GGVDIQIIEL 180
57|SequenceR|290|281|LNLSQGGIEL
>sp|VL2_HPV54|MINOR capsid protein L2|Human papillomavirus type 54
Query: 4 SQGGIEL 10
SQGG E+
Sbjct: 124 SQGGFEI 130
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 3 LSQGGIE 9
+S+GGIE
Sbjct: 738 VSKGGIE 744
58|SequenceR|295|286|YERCDLNLSQ
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 ERCDLN 7
ERCDL+
Sbjct: 650 ERCDLD 655
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 ERCDLN 7
ERCDL+
Sbjct: 650 ERCDLD 655
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 RCDLNL 8
RCDL+L
Sbjct: 1193 RCDLDL 1198
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 ERCDLNL 8
E CDLNL
Sbjct: 333 ELCDLNL 339
>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 RCDLN 7
RCDLN
Sbjct: 474 RCDLN 478
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 5 DLNLSQ 10
DLNLSQ
Sbjct: 1997 DLNLSQ 2002
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 5 DLNLSQ 10
DLNLSQ
Sbjct: 1996 DLNLSQ 2001
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 5 DLNLSQ 10
DLNLSQ
Sbjct: 1996 DLNLSQ 2001
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 1 YERCDLNL 8
+ERC+L +
Sbjct: 303 FERCNLGI 310
>sp|E3GL_ADE05|EARLY E3 18.5 kDa glycoprotein|Human adenovirus C serotype 5
Query: 1 YERCDLNL 8
YE CD+ +
Sbjct: 98 YEMCDITM 105
>sp|E3GL_ADE06|EARLY E3 18.5 kDa glycoprotein|Human adenovirus C serotype 6
Query: 1 YERCDLNL 8
YE CD+ +
Sbjct: 97 YEMCDITM 104
>sp|E3GL_ADE02|EARLY E3 18.5 kDa glycoprotein|Human adenovirus C serotype 2
Query: 1 YERCDLNL 8
YE CD+ +
Sbjct: 97 YEMCDITM 104
59|SequenceR|300|291|AKDANYERCD
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 DANYERC 9
DA Y RC
Sbjct: 591 DATYSRC 597
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 DANYERC 9
DA Y RC
Sbjct: 591 DATYSRC 597
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 DANYERC 9
DA Y RC
Sbjct: 596 DATYNRC 602
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 DANYERC 9
DA Y RC
Sbjct: 592 DATYTRC 598
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 3 DANYERC 9
DA+Y++C
Sbjct: 709 DADYKKC 715
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 AKDANYE 7
A+DAN+E
Sbjct: 472 AQDANFE 478
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 DANYERC 9
+A Y+RC
Sbjct: 595 EATYQRC 601
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 DANYERC 9
+A Y+RC
Sbjct: 596 EATYQRC 602
>sp|NEC2_HCMVM|NUCLEAR egress protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 KDANYERCD 10
K+ NY CD
Sbjct: 36 KNPNYSVCD 44
>sp|NEC2_HCMVA|NUCLEAR egress protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 KDANYERCD 10
K+ NY CD
Sbjct: 36 KNPNYSVCD 44
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 4 ANYERC 9
AN++RC
Sbjct: 1387 ANFKRC 1392
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 4 ANYERC 9
AN++RC
Sbjct: 1387 ANFKRC 1392
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 4 ANYERC 9
AN++RC
Sbjct: 1387 ANFKRC 1392
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 4 ANYERC 9
AN++RC
Sbjct: 1387 ANFKRC 1392
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 4 ANYERC 9
AN++RC
Sbjct: 1387 ANFKRC 1392
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 4 ANYERC 9
AN++RC
Sbjct: 1401 ANFKRC 1406
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 4 ANYERC 9
AN++RC
Sbjct: 1401 ANFKRC 1406
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 4 ANYERC 9
AN++RC
Sbjct: 1400 ANFKRC 1405
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 4 ANYERC 9
AN++RC
Sbjct: 1403 ANFKRC 1408
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 4 ANYERC 9
AN++RC
Sbjct: 1403 ANFKRC 1408
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 4 ANYERC 9
AN++RC
Sbjct: 1400 ANFKRC 1405
>sp|UL33_HHV7J|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 7 (strain JI)
Query: 2 KDANYERCD 10
K NY +C+
Sbjct: 186 KKGNYGKCN 194
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 3 DANYERCD 10
DA+Y R D
Sbjct: 1429 DADYSRWD 1436
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 DANYERC 9
+A Y RC
Sbjct: 597 EATYSRC 603
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 DANYERC 9
+A Y RC
Sbjct: 591 EATYSRC 597
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 3 DANYERC 9
+A Y RC
Sbjct: 591 EATYSRC 597
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 DANYERC 9
+A Y RC
Sbjct: 591 EATYSRC 597
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 KDANYER 8
KD NY R
Sbjct: 872 KDKNYTR 878
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 2 KDANYERCD 10
+DA + RC+
Sbjct: 470 QDAGHMRCE 478
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 2 KDANYERCD 10
+DA + RC+
Sbjct: 469 QDAGHVRCE 477
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 5 NYERCD 10
N+E CD
Sbjct: 129 NFELCD 134
60|SequenceR|305|296|GSDVIAKDAN
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 1 GSDVIAKDA 9
GSD +AK A
Sbjct: 77 GSDTVAKQA 85
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 2 SDVIAKD 8
+D+IAKD
Sbjct: 288 TDLIAKD 294
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 2 SDVIAKD 8
+D+IAKD
Sbjct: 288 TDLIAKD 294
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 DVIAKDA 9
DVI+KD+
Sbjct: 387 DVISKDS 393
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 3 DVIAKDA 9
DVI+KD+
Sbjct: 387 DVISKDS 393
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 2 SDVIAKDA 9
SDV+AK A
Sbjct: 277 SDVLAKPA 284
>sp|PG189_VARV|ANKYRIN repeat protein OPG189|Variola virus
Query: 1 GSDVIAKDAN 10
GSDV KD +
Sbjct: 200 GSDVDKKDTH 209
>sp|PG189_VAR67|ANKYRIN repeat protein OPG189|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 GSDVIAKDAN 10
GSDV KD +
Sbjct: 200 GSDVDKKDTH 209
>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)
Query: 1 GSDVIAKD 8
GSDV KD
Sbjct: 203 GSDVDKKD 210
>sp|PG189_VACCC|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GSDVIAKD 8
GSDV KD
Sbjct: 200 GSDVDKKD 207
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 GSDVIAKDA 9
G+DV K+A
Sbjct: 90 GTDVFLKEA 98
61|SequenceR|310|301|RLLTTGSDVI
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 3 LTTGSDVI 10
L TGSDVI
Sbjct: 578 LITGSDVI 585
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 RLLTTGSD 8
+LLT GSD
Sbjct: 158 KLLTKGSD 165
>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)
Query: 1 RLLTTGSD 8
+LLT GSD
Sbjct: 161 KLLTKGSD 168
>sp|VL2_HPV40|MINOR capsid protein L2|Human papillomavirus 40
Query: 2 LLTTGSDVI 10
LLT+G D++
Sbjct: 407 LLTSGPDIV 415
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 RLLTTGSDVI 10
RLL + +DVI
Sbjct: 2081 RLLNSDTDVI 2090
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 5 TGSDVI 10
TGSDVI
Sbjct: 584 TGSDVI 589
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 LTTGSDV 9
L TGSD+
Sbjct: 1062 LVTGSDI 1068
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 LTTGSDV 9
L TGSD+
Sbjct: 1063 LVTGSDI 1069
>sp|VL2_HPV07|MINOR capsid protein L2|Human papillomavirus 7
Query: 2 LLTTGSDVI 10
LT+G D++
Sbjct: 401 FLTSGPDIV 409
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 3 LTTGSDV 9
LT+GSD+
Sbjct: 10 LTSGSDL 16
62|SequenceR|315|306|VKQPLRLLTT
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 2 KQPLRLLT 9
+QPLRL T
Sbjct: 604 QQPLRLAT 611
>sp|UNG_VARV|URACIL-DNA glycosylase|Variola virus
Query: 1 VKQPLR 6
+KQPLR
Sbjct: 53 LKQPLR 58
>sp|NEC2_HHV7J|NUCLEAR egress protein 2|Human herpesvirus 7 (strain JI)
Query: 1 VKQPLRL 7
+K+PLRL
Sbjct: 184 IKKPLRL 190
>sp|UNG_VAR67|URACIL-DNA glycosylase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 VKQPLR 6
+KQPLR
Sbjct: 53 LKQPLR 58
>sp|UNG_VACCA|URACIL-DNA glycosylase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 VKQPLR 6
+KQPLR
Sbjct: 53 LKQPLR 58
>sp|UNG_MONPV|URACIL-DNA glycosylase|Monkeypox virus (MPXV)
Query: 1 VKQPLR 6
+KQPLR
Sbjct: 53 LKQPLR 58
>sp|UNG_VACCC|URACIL-DNA glycosylase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VKQPLR 6
+KQPLR
Sbjct: 53 LKQPLR 58
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 VKQPLRLL 8
V+QP++L+
Sbjct: 43 VRQPIKLV 50
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VKQPLRLL 8
V+QP++L+
Sbjct: 43 VRQPIKLV 50
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 1 VKQPLRLLTT 10
V P++++TT
Sbjct: 388 VVNPMKMITT 397
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 VKQPLRLLTT 10
V P++++TT
Sbjct: 388 VVNPMKMITT 397
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VKQPLRLLTT 10
V P++++TT
Sbjct: 388 VVNPMKMITT 397
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 1 VKQPLRLLTT 10
V P++++TT
Sbjct: 388 VVNPMKMITT 397
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 3 QPLRLLTT 10
QP+ L+TT
Sbjct: 1225 QPVALVTT 1232
63|SequenceR|320|311|VVADFVKQPL
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 3 ADFVKQPL 10
ADFV QP+
Sbjct: 641 ADFVAQPV 648
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 ADFVKQPL 10
ADFV QP+
Sbjct: 641 ADFVAQPV 648
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 3 ADFVKQPL 10
ADFV QP+
Sbjct: 641 ADFVAQPV 648
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 3 ADFVKQPL 10
ADFV QP+
Sbjct: 639 ADFVAQPV 646
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 3 ADFVKQPL 10
ADFV QP+
Sbjct: 641 ADFVAQPV 648
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 3 ADFVKQPL 10
ADFV QP+
Sbjct: 641 ADFVAQPV 648
>sp|ICP27_EBVG|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 ADFVKQPL 10
+ +VKQPL
Sbjct: 387 SSYVKQPL 394
>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)
Query: 3 ADFVKQPL 10
+ +VKQPL
Sbjct: 387 SSYVKQPL 394
>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)
Query: 3 ADFVKQPL 10
+ +VKQPL
Sbjct: 387 SSYVKQPL 394
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 VVADFVKQPL 10
++ DF+ PL
Sbjct: 626 IIHDFIDNPL 635
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 VVADFVKQPL 10
++ DF+ PL
Sbjct: 626 IIHDFIDNPL 635
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 VVADFVKQPL 10
++ DF+ PL
Sbjct: 626 IIHDFIDNPL 635
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 DFVKQP 9
DFV QP
Sbjct: 5708 DFVAQP 5713
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 ADFVKQPL 10
+DFV PL
Sbjct: 966 SDFVMNPL 973
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 ADFVKQPL 10
+DFV PL
Sbjct: 966 SDFVMNPL 973
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 ADFVKQPL 10
+DFV PL
Sbjct: 966 SDFVMNPL 973
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 ADFVKQPL 10
+DFV PL
Sbjct: 966 SDFVMNPL 973
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 ADFVKQPL 10
+DFV PL
Sbjct: 966 SDFVMNPL 973
>sp|E312_ADE02|EARLY E3A 12.5 kDa protein|Human adenovirus C serotype 2
Query: 1 VVADFVKQPL 10
++ +F K+PL
Sbjct: 59 LIREFTKRPL 68
64|SequenceR|325|316|RAVAEVVADF
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 RAVAEVVADF 10
R +AE++ DF
Sbjct: 1777 RGLAEIMQDF 1786
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 AVAEVVADF 10
+VAE++ DF
Sbjct: 1803 SVAEILEDF 1811
>sp|IR14_HCMVA|UNCHARACTERIZED protein IRL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RAVAEVVADF 10
RAV + +AD+
Sbjct: 139 RAVPQHIADY 148
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 RAVAEVVA 8
RA+AE+ A
Sbjct: 1963 RAIAEIYA 1970
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 RAVAEVVA 8
RA+AE+ A
Sbjct: 1963 RAIAEIYA 1970
65|SequenceR|330|321|PILSARAVAE
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 LSARAVAE 10
L ARA+AE
Sbjct: 1268 LIARAIAE 1275
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 LSARAVAE 10
L ARA+AE
Sbjct: 1268 LIARAIAE 1275
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 LSARAVAE 10
L ARA+AE
Sbjct: 1265 LIARAIAE 1272
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 LSARAVAE 10
L ARA+AE
Sbjct: 1266 LIARAIAE 1273
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 LSARAVAE 10
L ARA+AE
Sbjct: 1265 LIARAIAE 1272
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 LSARAVAE 10
L ARA+AE
Sbjct: 1266 LIARAIAE 1273
66|SequenceR|335|326|GDSFEPILSA
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 2 DSFEPILS 9
DSF+P+ S
Sbjct: 198 DSFDPVSS 205
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 DSFEPI 7
DSFEP+
Sbjct: 2258 DSFEPL 2263
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 DSFEPI 7
DSFEP+
Sbjct: 2259 DSFEPL 2264
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GDSFEPILS 9
GDS E +LS
Sbjct: 32 GDSVEEVLS 40
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GDSFEPILS 9
GDS E +LS
Sbjct: 32 GDSVEEVLS 40
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DSFEPI 7
DSFEP+
Sbjct: 2254 DSFEPL 2259
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DSFEPI 7
DSFEP+
Sbjct: 2254 DSFEPL 2259
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 DSFEPI 7
DSFEP+
Sbjct: 2255 DSFEPL 2260
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 DSFEPI 7
DSFEP+
Sbjct: 2260 DSFEPL 2265
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 DSFEPI 7
DSFEP+
Sbjct: 2260 DSFEPL 2265
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 DSFEPI 7
DSFEP+
Sbjct: 2262 DSFEPL 2267
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 DSFEPI 7
DSFEP+
Sbjct: 2259 DSFEPL 2264
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 3 SFEPILSA 10
SF+PIL+
Sbjct: 310 SFDPILAG 317
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 3 SFEPILSA 10
SF+PIL+
Sbjct: 310 SFDPILAG 317
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 SFEPILSA 10
SF+PIL+
Sbjct: 310 SFDPILAG 317
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 DSFEPILS 9
DSF+P+++
Sbjct: 2252 DSFDPLIA 2259
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DSFEPI 7
DSF+PI
Sbjct: 2254 DSFDPI 2259
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 DSFEPIL 8
D+F+P+L
Sbjct: 556 DTFQPML 562
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 DSFEPIL 8
D+F+P+L
Sbjct: 556 DTFQPML 562
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 DSFEPIL 8
D+F+P+L
Sbjct: 556 DTFQPML 562
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DSFEPILS 9
DSF+P+++
Sbjct: 2254 DSFDPLVA 2261
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 GDSFEPIL 8
GDS PIL
Sbjct: 210 GDSGRPIL 217
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 GDSFEPIL 8
GDS PIL
Sbjct: 210 GDSGRPIL 217
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 DSFEPILS 9
DSF+P+++
Sbjct: 2254 DSFDPLVA 2261
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 DSFEPILS 9
DSF+P+++
Sbjct: 2254 DSFDPLVA 2261
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 DSFEPILS 9
DSF+P+++
Sbjct: 2254 DSFDPLVA 2261
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 GDSFEPIL 8
GDS PIL
Sbjct: 210 GDSGRPIL 217
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 DSFEPILS 9
DSF+P+++
Sbjct: 2254 DSFDPLVA 2261
>sp|PG176_MONPV|PROTEIN OPG176|Monkeypox virus (MPXV)
Query: 3 SFEPILS 9
SF+PIL+
Sbjct: 90 SFKPILA 96
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 GDSFEPIL 8
GDS PIL
Sbjct: 209 GDSGRPIL 216
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 GDSFEPIL 8
GDS PIL
Sbjct: 208 GDSGRPIL 215
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 DSFEPILS 9
DSF+P+++
Sbjct: 2259 DSFDPLVA 2266
>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain Copenhagen)
Query: 1 GDSFEPI 7
GDS EP+
Sbjct: 154 GDSEEPV 160
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 GDSFEPIL 8
GDS PIL
Sbjct: 223 GDSGRPIL 230
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 GDSFEPIL 8
GDS PIL
Sbjct: 224 GDSGRPIL 231
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 DSFEPI 7
DSF+P+
Sbjct: 523 DSFDPV 528
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 GDSFEPIL 8
GDS PIL
Sbjct: 224 GDSGRPIL 231
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 GDSFEPIL 8
GDS PIL
Sbjct: 224 GDSGRPIL 231
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 GDSFEPIL 8
GDS PIL
Sbjct: 224 GDSGRPIL 231
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 2 DSFEPILS 9
D F P+LS
Sbjct: 477 DRFPPVLS 484
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 GDSFEPIL 8
GDS PIL
Sbjct: 223 GDSGRPIL 230
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 DSFEPIL 8
DSF+P++
Sbjct: 2258 DSFDPVV 2264
>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)
Query: 1 GDSFEPI 7
GDS EP+
Sbjct: 154 GDSEEPV 160
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 GDSFEPIL 8
GD F PI+
Sbjct: 784 GDKFFPIV 791
Query: 1 GDSFEPIL 8
GD F P L
Sbjct: 544 GDGFVPFL 551
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 GDSFEPIL 8
GD F PI+
Sbjct: 784 GDKFFPIV 791
Query: 1 GDSFEPIL 8
GD F P L
Sbjct: 544 GDGFVPFL 551
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 GDSFEPIL 8
GD F PI+
Sbjct: 784 GDKFFPIV 791
Query: 1 GDSFEPIL 8
GD F P L
Sbjct: 544 GDGFVPFL 551
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 GDSFEPIL 8
GD F PI+
Sbjct: 784 GDKFFPIV 791
Query: 1 GDSFEPIL 8
GD F P L
Sbjct: 544 GDGFVPFL 551
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 GDSFEPIL 8
GD F PI+
Sbjct: 784 GDKFFPIV 791
Query: 1 GDSFEPIL 8
GD F P L
Sbjct: 544 GDGFVPFL 551
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 GDSFEPIL 8
GD F PI+
Sbjct: 784 GDKFFPIV 791
Query: 1 GDSFEPIL 8
GD F P L
Sbjct: 544 GDGFVPFL 551
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 GDSFEPIL 8
GDS PIL
Sbjct: 208 GDSGRPIL 215
>sp|VE2_HPV10|REGULATORY protein E2|Human papillomavirus type 10
Query: 2 DSFEPILS 9
D+F+P+ S
Sbjct: 198 DAFDPVSS 205
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 DSFEPIL 8
DSF+P++
Sbjct: 2255 DSFDPLV 2261
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 DSFEPIL 8
DSF+P++
Sbjct: 2256 DSFDPLV 2262
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 GDSFEP 6
GD F+P
Sbjct: 106 GDKFDP 111
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 1 GDSFEPILS 9
GD + P+L+
Sbjct: 395 GDDYPPLLA 403
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 GDSFEP 6
GD F+P
Sbjct: 106 GDKFDP 111
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DSFEPI 7
DSF+P+
Sbjct: 2254 DSFDPL 2259
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DSFEPI 7
DSF+P+
Sbjct: 2254 DSFDPL 2259
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DSFEPI 7
DSF+P+
Sbjct: 2254 DSFDPL 2259
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DSFEPI 7
DSF+P+
Sbjct: 2254 DSFDPL 2259
67|SequenceR|340|331|SGTWFGDSFE
>sp|GM_HHV7J|ENVELOPE glycoprotein M|Human herpesvirus 7 (strain JI)
Query: 3 TWFGDSF 9
TW GDS
Sbjct: 119 TWMGDSL 125
>sp|TEG3_VZVO|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 TWFGDSFE 10
TWFG+ E
Sbjct: 138 TWFGEDDE 145
>sp|TEG3_VZVD|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 TWFGDSFE 10
TWFG+ E
Sbjct: 138 TWFGEDDE 145
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 SGTWFGDS 8
+G W GD+
Sbjct: 2967 NGVWLGDT 2974
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 GTWFGD 7
GTW GD
Sbjct: 2021 GTWRGD 2026
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 SGTWFGDS 8
+G W GD+
Sbjct: 2967 NGVWLGDT 2974
>sp|GM_HHV6Z|ENVELOPE glycoprotein M|Human herpesvirus 6B (strain Z29)
Query: 3 TWFGDS 8
TW GD+
Sbjct: 119 TWMGDT 124
>sp|GM_HHV6U|ENVELOPE glycoprotein M|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 TWFGDS 8
TW GD+
Sbjct: 119 TWMGDT 124
>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)
Query: 1 SGTWFG 6
SGT+FG
Sbjct: 265 SGTYFG 270
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 GTWFGD 7
GTW GD
Sbjct: 2018 GTWRGD 2023
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 1 SGTWFG 6
SGT+FG
Sbjct: 265 SGTYFG 270
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SGTWFG 6
SGT+FG
Sbjct: 265 SGTYFG 270
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 GTWFGD 7
GTW GD
Sbjct: 2022 GTWRGD 2027
>sp|UL33_HCMVM|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain Merlin)
Query: 1 SGTWFG 6
SGTW G
Sbjct: 380 SGTWKG 385
>sp|UL33_HCMVA|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain AD169)
Query: 1 SGTWFG 6
SGTW G
Sbjct: 380 SGTWKG 385
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 SGTWFGD 7
+G W GD
Sbjct: 2993 NGLWLGD 2999
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 SGTWFGD 7
+G W GD
Sbjct: 2993 NGLWLGD 2999
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 TWFGDS 8
+W+GD+
Sbjct: 2015 SWYGDA 2020
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 3 TWFG 6
TWFG
Sbjct: 652 TWFG 655
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 TWFGD 7
TWF D
Sbjct: 1343 TWFDD 1347
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 3 TWFGD 7
TWF D
Sbjct: 1343 TWFDD 1347
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 TWFGDSFE 10
TW G FE
Sbjct: 2773 TWKGPQFE 2780
68|SequenceR|345|336|WCALQSGTWF
>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41
Query: 2 CALQSGTW 9
CAL+S TW
Sbjct: 299 CALESSTW 306
>sp|SPIK2_ADE40|FIBER protein 2|Human adenovirus F serotype 40
Query: 2 CALQSGTW 9
CAL+S TW
Sbjct: 299 CALESSTW 306
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 WCALQSGTW 9
+C L GTW
Sbjct: 286 YCGLLLGTW 294
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 WCALQSGTW 9
+CA+ S TW
Sbjct: 446 FCAVASETW 454
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 WCALQSGTW 9
+CA+ S TW
Sbjct: 446 FCAVASETW 454
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 WCALQSGTW 9
+CA+ S TW
Sbjct: 446 FCAVASETW 454
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 LQSGTW 9
LQ GTW
Sbjct: 371 LQEGTW 376
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 LQSGTW 9
LQ GTW
Sbjct: 371 LQEGTW 376
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 LQSGTW 9
LQ GTW
Sbjct: 371 LQEGTW 376
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 4 LQSGTW 9
LQ GTW
Sbjct: 69 LQGGTW 74
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 WCALQSGTWF 10
W + SG W+
Sbjct: 140 WTSASSGWWW 149
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 CALQSGTW 9
C LQ TW
Sbjct: 312 CELQWDTW 319
>sp|CEP2_HHV2H|CYTOPLASMIC envelopment protein 2|Human herpesvirus 2 (strain HG52)
Query: 2 CALQSGTWF 10
CAL G W+
Sbjct: 191 CALGPGAWW 199
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 ALQSGTW 9
ALQ G W
Sbjct: 427 ALQGGLW 433
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 ALQSGTW 9
ALQ G W
Sbjct: 427 ALQGGLW 433
>sp|VE2_HPV60|REGULATORY protein E2|Human papillomavirus type 60
Query: 5 QSGTW 9
Q+GTW
Sbjct: 184 QTGTW 188
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 2 CALQSGTW 9
C L G W
Sbjct: 7 CILHCGIW 14
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 5 QSGTWF 10
Q+G WF
Sbjct: 566 QAGVWF 571
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 2 CALQSGTW 9
C L TW
Sbjct: 415 CELTDSTW 422
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 CALQSGTW 9
C L TW
Sbjct: 415 CELTDSTW 422
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 CALQSGTW 9
C L TW
Sbjct: 415 CELTDSTW 422
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 5 QSGTWF 10
Q+G WF
Sbjct: 568 QTGAWF 573
>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)
Query: 2 CALQSGTW 9
CAL G W
Sbjct: 193 CALGPGAW 200
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 5 QSGTW 9
Q GTW
Sbjct: 308 QGGTW 312
69|SequenceR|350|341|TESNTWCALQ
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 3 SNTWCALQ 10
S++WC LQ
Sbjct: 536 SSSWCQLQ 543
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 SNTWCALQ 10
S++WC LQ
Sbjct: 536 SSSWCQLQ 543
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 3 SNTWCALQ 10
+ WC LQ
Sbjct: 510 ATAWCELQ 517
>sp|NSP3_ROTHC|NON-STRUCTURAL protein 3|Rotavirus C (isolate RVC/Human/United
Query: 2 ESNTWC 7
E+N WC
Sbjct: 289 ENNWWC 294
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 3 SNTWCAL 9
S TWC L
Sbjct: 610 SRTWCKL 616
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 3 SNTWCALQ 10
S TWC L
Sbjct: 607 SRTWCKLD 614
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 3 SNTWCAL 9
S TWC L
Sbjct: 607 SRTWCKL 613
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 3 SNTWCAL 9
S TWC L
Sbjct: 600 SRTWCRL 606
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 3 SNTWCAL 9
S TWC L
Sbjct: 594 SRTWCRL 600
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 2 ESNTWC 7
E N WC
Sbjct: 299 EENYWC 304
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 4 NTWCALQ 10
N WC L+
Sbjct: 14 NDWCILE 20
70|SequenceR|355|346|FYSWPTESNT
>sp|UL38_HHV6H|APOPTOSIS inhibitor U19|Human herpesvirus 6B (HHV-6 variant
Query: 2 YSWPTE 7
+ WPTE
Sbjct: 210 FCWPTE 215
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 4 WPTESN 9
WP E N
Sbjct: 631 WPMEDN 636
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 4 WPTESN 9
WP E N
Sbjct: 631 WPMEDN 636
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 4 WPTESN 9
WPTE++
Sbjct: 815 WPTETS 820
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 FYSWPTESN 9
F+ WPT +
Sbjct: 879 FFPWPTSGD 887
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 FYSWPTESN 9
F+ WPT +
Sbjct: 877 FFPWPTSGD 885
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 FYSWPTESN 9
F+ WPT +
Sbjct: 879 FFPWPTSGD 887
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 FYSWPTESN 9
+YS PT N
Sbjct: 1961 YYSEPTSEN 1969
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 YSWPTES 8
YS+PT+S
Sbjct: 1645 YSYPTKS 1651
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 1 FYSWPT 6
F+SW T
Sbjct: 28 FFSWST 33
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 1 FYSWPTESN 9
F+ WPT +
Sbjct: 879 FFPWPTSGD 887
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 FYSWPTESNT 10
FY PTE +
Sbjct: 566 FYQGPTEESV 575
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 FYSWPTESNT 10
FY PTE +
Sbjct: 566 FYQGPTEESV 575
>sp|NSS_UUKS|NON-STRUCTURAL protein NS-S|Uukuniemi virus (strain S23) (UUKV)
Query: 4 WPTESN 9
WP E N
Sbjct: 88 WPLEKN 93
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 SWPTESN 9
+WPT +N
Sbjct: 735 AWPTATN 741
>sp|PRO_ADE40|PROTEASE adenovirus F serotype 40
Query: 1 FYSWPT 6
F +WPT
Sbjct: 133 FVNWPT 138
71|SequenceR|360|351|ISIKPFYSWP
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 2 SIKPFYSW 9
S+K F+SW
Sbjct: 260 SLKAFFSW 267
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 5 PFYSW 9
PFY+W
Sbjct: 2354 PFYAW 2358
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 5 PFYSW 9
PFY+W
Sbjct: 2354 PFYAW 2358
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 IKPFYSW 9
I P YSW
Sbjct: 407 ITPLYSW 413
>sp|NCAP_CVHOC|NUCLEOPROTEIN coronavirus OC43 (HCoV-OC43)
Query: 2 SIKPFYSW 9
++ P+YSW
Sbjct: 58 NVVPYYSW 65
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 2 SIKPFYSW 9
S+K F+SW
Sbjct: 249 SLKAFFSW 256
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 KPFYSWP 10
KP Y WP
Sbjct: 78 KPGYPWP 84
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 KPFYSWP 10
KP Y WP
Sbjct: 78 KPGYPWP 84
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 KPFYSWP 10
KP Y WP
Sbjct: 78 KPGYPWP 84
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 4 KPFYSWP 10
KP Y WP
Sbjct: 78 KPGYPWP 84
>sp|TRX2_EBVB9|TRIPLEX capsid protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 KPFYSW 9
+PF+ W
Sbjct: 98 QPFFQW 103
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 4 KPFYSWP 10
+P Y+WP
Sbjct: 78 QPGYAWP 84
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 4 KPFYSWP 10
KP Y WP
Sbjct: 78 KPGYPWP 84
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 KPFYSWP 10
KP WP
Sbjct: 4641 KPLIEWP 4647
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 RPGYPWP 84
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 ISIKPFYS 8
+ I PFY+
Sbjct: 274 VDISPFYN 281
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ISIKPFYS 8
+ I PFY+
Sbjct: 274 VDISPFYN 281
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 RPGYPWP 84
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 ISIKPFYSW 9
I I+P SW
Sbjct: 2292 IDIQPARSW 2300
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 ISIKPFYSW 9
I I+P SW
Sbjct: 2292 IDIQPAKSW 2300
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|TRX2_HHV8P|TRIPLEX capsid protein 2|Human herpesvirus 8 type P
Query: 5 PFYSW 9
PF+ W
Sbjct: 101 PFFQW 105
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 5 PFYSW 9
P YSW
Sbjct: 3354 PVYSW 3358
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 ISIKPFYSW 9
I I+P SW
Sbjct: 2293 IDIQPARSW 2301
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 1 ISIKPFYSW 9
+SIK ++W
Sbjct: 241 LSIKEVFTW 249
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 4 KPFYSWP 10
+P Y WP
Sbjct: 78 QPGYPWP 84
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 SIKPFYSW 9
+ KP+Y W
Sbjct: 312 NFKPYYPW 319
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 SIKPFYSW 9
+ KP+Y W
Sbjct: 312 NFKPYYPW 319
>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7
Query: 2 SIKPFYSW 9
+++P Y W
Sbjct: 380 ALRPCYDW 387
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 SIKPFYSW 9
+ KP+Y W
Sbjct: 312 NFKPYYPW 319
72|SequenceR|365|356|EDRLYISIKP
>sp|HEMA_CVHN1|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N1)
Query: 2 DRLYISIKP 10
D +YIS+KP
Sbjct: 218 DCIYISLKP 226
>sp|HEMA_CVHN2|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N2)
Query: 2 DRLYISIKP 10
D YIS+KP
Sbjct: 221 DCTYISLKP 229
>sp|VP6_ROTB2|INTERMEDIATE capsid protein VP6|Rotavirus X (isolate
Query: 2 DRLYISIKP 10
DR+ I+I+P
Sbjct: 283 DRISITIEP 291
>sp|VP6_ROTJ1|INTERMEDIATE capsid protein VP6|Rotavirus X (strain
Query: 2 DRLYISIKP 10
DR+ I+I+P
Sbjct: 283 DRISITIEP 291
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 DRLYIS 7
DRLY+S
Sbjct: 347 DRLYLS 352
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 EDRLYISIKP 10
+DR+Y+S P
Sbjct: 1110 KDRVYLSWVP 1119
>sp|NSP1_ROTH6|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 1 EDRLYISIK 9
E+R+Y SIK
Sbjct: 365 EERIYESIK 373
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 DRLYIS 7
DRLY+S
Sbjct: 347 DRLYLS 352
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 2 DRLYIS 7
DRLY+S
Sbjct: 347 DRLYLS 352
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 2 DRLYIS 7
DRLY+S
Sbjct: 347 DRLYLS 352
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 DRLYIS 7
DRLY+S
Sbjct: 347 DRLYLS 352
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 2 DRLYIS 7
DRLY+S
Sbjct: 347 DRLYLS 352
73|SequenceR|370|361|SRSSNEDRLY
>sp|NS1_I02A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 RSSNEDR 8
RSSNEDR
Sbjct: 204 RSSNEDR 210
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 SRSSNEDRL 9
+ +SNEDR
Sbjct: 653 ANASNEDRF 661
>sp|NS1_I80A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 RSSNED 7
RSSNED
Sbjct: 204 RSSNED 209
>sp|NS1_I78A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 2 RSSNED 7
RSSNED
Sbjct: 204 RSSNED 209
>sp|NS1_I85A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 RSSNED 7
RSSNED
Sbjct: 204 RSSNED 209
>sp|NS1_I59A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 RSSNED 7
RSSNED
Sbjct: 204 RSSNED 209
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 4 SNEDRLY 10
+N+D+LY
Sbjct: 352 TNDDKLY 358
74|SequenceR|375|366|ITIRFSRSSN
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 ITIRFSR 7
ITIR+SR
Sbjct: 797 ITIRYSR 803
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 ITIRFSR 7
ITIR+SR
Sbjct: 797 ITIRYSR 803
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 ITIRFSR 7
ITIR+SR
Sbjct: 796 ITIRYSR 802
>sp|VL2_HPV52|MINOR capsid protein L2|Human papillomavirus 52
Query: 2 TIRFSRSSN 10
T+RFSR N
Sbjct: 298 TVRFSRLGN 306
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 1 ITIRFSR 7
IT+R+SR
Sbjct: 797 ITVRYSR 803
>sp|VL2_HPV35|MINOR capsid protein L2|Human papillomavirus 35
Query: 2 TIRFSRSSN 10
TIR+SR N
Sbjct: 297 TIRYSRVGN 305
>sp|VL2_HPV27|MINOR capsid protein L2|Human papillomavirus 27
Query: 2 TIRFSR 7
T+RFSR
Sbjct: 294 TVRFSR 299
>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57
Query: 2 TIRFSR 7
T+RFSR
Sbjct: 296 TVRFSR 301
>sp|VL2_HPV67|MINOR capsid protein L2|Human papillomavirus 67
Query: 2 TIRFSR 7
TIRFSR
Sbjct: 298 TIRFSR 303
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ITIRFSRSS 9
+TI FSR+S
Sbjct: 362 VTIIFSRTS 370
>sp|VL2_HPV29|MINOR capsid protein L2|Human papillomavirus 29
Query: 2 TIRFSR 7
T+RFSR
Sbjct: 297 TVRFSR 302
>sp|VL2_HPV2A|MINOR capsid protein L2|Human papillomavirus type 2a
Query: 2 TIRFSR 7
T+RFSR
Sbjct: 295 TVRFSR 300
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 2 TIRFSR 7
T+RFSR
Sbjct: 296 TVRFSR 301
>sp|VL2_HPV39|MINOR capsid protein L2|Human papillomavirus 39
Query: 2 TIRFSR 7
T+RFSR
Sbjct: 293 TVRFSR 298
>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69
Query: 2 TIRFSR 7
T+RFSR
Sbjct: 295 TVRFSR 300
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 2 TIRFSR 7
T+RFSR
Sbjct: 295 TVRFSR 300
>sp|VL2_HPV28|MINOR capsid protein L2|Human papillomavirus 28
Query: 2 TIRFSR 7
T+RFSR
Sbjct: 297 TVRFSR 302
>sp|VL2_HPV33|MINOR capsid protein L2|Human papillomavirus 33
Query: 2 TIRFSR 7
T+RFSR
Sbjct: 298 TVRFSR 303
>sp|VL2_HPV45|MINOR capsid protein L2|Human papillomavirus 45
Query: 2 TIRFSR 7
T+RFSR
Sbjct: 293 TVRFSR 298
>sp|VL2_HPV70|MINOR capsid protein L2|Human papillomavirus type 70
Query: 2 TIRFSR 7
T+RFSR
Sbjct: 293 TVRFSR 298
>sp|VL2_HPV18|MINOR capsid protein L2|Human papillomavirus type 18
Query: 2 TIRFSR 7
T+RFSR
Sbjct: 293 TVRFSR 298
>sp|VL2_HPV10|MINOR capsid protein L2|Human papillomavirus type 10
Query: 2 TIRFSR 7
T+RFSR
Sbjct: 297 TVRFSR 302
>sp|VL2_HPV61|MINOR capsid protein L2|Human papillomavirus type 61
Query: 2 TIRFSR 7
T+RFSR
Sbjct: 291 TVRFSR 296
>sp|VL2_HPV31|MINOR capsid protein L2|Human papillomavirus 31
Query: 2 TIRFSRSSN 10
T+R+SR N
Sbjct: 293 TVRYSRLGN 301
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 ITIRFSRSSN 10
IT+RFS ++
Sbjct: 868 ITLRFSNPND 877
75|SequenceR|380|371|YLQPLITIRF
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 1 YLQPLITIR 9
YLQP+IT R
Sbjct: 671 YLQPIITTR 679
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 1 YLQPLITIR 9
Y+QP+IT R
Sbjct: 674 YIQPIITTR 682
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QPLITIR 9
+PL+TIR
Sbjct: 493 RPLVTIR 499
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QPLITIR 9
+PL+TIR
Sbjct: 493 RPLVTIR 499
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QPLITIR 9
+PL+TIR
Sbjct: 498 RPLVTIR 504
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QPLITIR 9
+PL+TIR
Sbjct: 491 RPLVTIR 497
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LQPLIT 7
LQPLIT
Sbjct: 235 LQPLIT 240
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LQPLIT 7
LQPLIT
Sbjct: 235 LQPLIT 240
>sp|US07_HCMVM|MEMBRANE glycoprotein US7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YLQPLITIRF 10
+LQ ITIRF
Sbjct: 201 FLQRNITIRF 210
>sp|US07_HCMVA|UNIQUE short US7 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YLQPLITIRF 10
+LQ ITIRF
Sbjct: 201 FLQRNITIRF 210
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)
Query: 1 YLQPLI 6
Y+QPL+
Sbjct: 251 YMQPLL 256
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 4 PLITIRF 10
PL TIR+
Sbjct: 2069 PLFTIRY 2075
>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69
Query: 2 LQPLIT 7
LQPLIT
Sbjct: 337 LQPLIT 342
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 1 YLQPLITIRF 10
YL L+T+R
Sbjct: 517 YLDVLLTVRL 526
>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)
Query: 1 YLQPLITIRF 10
YL L+T+R
Sbjct: 517 YLDVLLTVRL 526
76|SequenceR|385|376|MMPQIYLQPL
>sp|GM_HHV7J|ENVELOPE glycoprotein M|Human herpesvirus 7 (strain JI)
Query: 1 MMPQIYLQPL 10
+ PQ+YL P+
Sbjct: 66 LTPQLYLNPI 75
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 2 MPQIYLQP 9
+P++YL+P
Sbjct: 1358 LPEVYLKP 1365
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 MPQIY 6
MPQIY
Sbjct: 6439 MPQIY 6443
>sp|NEF_HV1S2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 PQIYLQPL 10
PQI L+P+
Sbjct: 69 PQIPLRPM 76
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 MMPQIYLQP 9
M P+ ++QP
Sbjct: 526 MTPEQFMQP 534
77|SequenceR|390|381|NLGAGMMPQI
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 1 NLGAGMM 7
NLGAG++
Sbjct: 639 NLGAGLL 645
>sp|E1BS_ADE41|E1B protein, small T-antigen|Human adenovirus F serotype 41
Query: 1 NLGAGMMPQ 9
NL AG+ PQ
Sbjct: 159 NLRAGLDPQ 167
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 1 NLGAGMMP 8
N G G MP
Sbjct: 508 NFGKGKMP 515
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 1 NLGAGMMP 8
+ GAG MP
Sbjct: 516 SFGAGQMP 523
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 1 NLGAGMMP 8
N G G MP
Sbjct: 525 NFGNGKMP 532
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 1 NLGAGMMP 8
N G G MP
Sbjct: 525 NFGNGKMP 532
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 1 NLGAGMMP 8
N G G MP
Sbjct: 525 NFGNGKMP 532
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 NLGAGMMP 8
N G G MP
Sbjct: 525 NFGNGKMP 532
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 1 NLGAGMMPQI 10
++G G +PQ+
Sbjct: 38 HIGRGKLPQL 47
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 1 NLGAGMMPQI 10
++G G +PQ+
Sbjct: 38 HIGRGKLPQL 47
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 3 GAGMMPQ 9
G+G+MP+
Sbjct: 251 GSGLMPE 257
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 3 GAGMMP 8
GAG MP
Sbjct: 2021 GAGKMP 2026
78|SequenceR|395|386|RYCEYNLGAG
>sp|VP7_ROTYO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 YCEYNL 7
YC+YNL
Sbjct: 134 YCDYNL 139
>sp|VP7_ROTHP|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 2 YCEYNL 7
YC+YNL
Sbjct: 134 YCDYNL 139
>sp|VP7_ROTHO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 YCEYNL 7
YC+YNL
Sbjct: 134 YCDYNL 139
>sp|VP7_ROTH3|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 YCEYNL 7
YC+YNL
Sbjct: 134 YCDYNL 139
>sp|VP7_ROTAM|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 2 YCEYNL 7
YC+YNL
Sbjct: 134 YCDYNL 139
>sp|VP7_ROTHM|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 YCEYNL 7
YC+YNL
Sbjct: 134 YCDYNL 139
>sp|VP7_ROTHK|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 YCEYNL 7
YC+YNL
Sbjct: 134 YCDYNL 139
>sp|VP7_ROTAD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 2 YCEYNL 7
YC+YNL
Sbjct: 134 YCDYNL 139
>sp|VP7_ROTHJ|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 YCEYNL 7
YC+YNL
Sbjct: 134 YCDYNL 139
>sp|VP7_ROTHW|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 2 YCEYNL 7
YC+YNL
Sbjct: 134 YCDYNL 139
>sp|VP7_ROTH4|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 YCEYNL 7
YC+YNL
Sbjct: 134 YCDYNL 139
>sp|VP7_ROTHX|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 YCEYNL 7
YC+YNL
Sbjct: 134 YCDYNL 139
>sp|VP7_ROTHV|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 YCEYNL 7
YC+YN+
Sbjct: 134 YCDYNI 139
>sp|VP7_ROTHQ|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 YCEYNL 7
YC+YN+
Sbjct: 134 YCDYNI 139
>sp|VP7_ROTHL|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 YCEYNL 7
YC+YN+
Sbjct: 134 YCDYNI 139
>sp|VP7_ROTHB|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 YCEYNL 7
YC+YN+
Sbjct: 134 YCDYNI 139
>sp|VP7_ROTH9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 YCEYNL 7
YC+YN+
Sbjct: 134 YCDYNI 139
>sp|VP7_ROTH7|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 2 YCEYNL 7
YC+YN+
Sbjct: 134 YCDYNI 139
>sp|VP7_ROTH6|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 YCEYNL 7
YC+YN+
Sbjct: 134 YCDYNI 139
>sp|VP7_ROTWI|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 2 YCEYNL 7
YC+YN+
Sbjct: 134 YCDYNV 139
>sp|VP7_ROTKU|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 YCEYNL 7
YC+YN+
Sbjct: 134 YCDYNV 139
>sp|VP7_ROTHU|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 YCEYNL 7
YC+YN+
Sbjct: 134 YCDYNV 139
>sp|VP7_ROTHT|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 2 YCEYNL 7
YC+YN+
Sbjct: 134 YCDYNV 139
>sp|VP7_ROTHS|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 YCEYNL 7
YC+YN+
Sbjct: 134 YCDYNV 139
>sp|VP7_ROT41|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 YCEYNL 7
YC+YN+
Sbjct: 134 YCDYNV 139
>sp|VP7_ROTHH|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 YCEYNL 7
YC+YN+
Sbjct: 134 YCDYNV 139
>sp|VP7_ROTHD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 2 YCEYNL 7
YC+YN+
Sbjct: 134 YCDYNV 139
>sp|VP7_ROTHA|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 YCEYNL 7
YC+YN+
Sbjct: 134 YCDYNV 139
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 CEYNLGAG 10
CEY LG G
Sbjct: 80 CEYLLGRG 87
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 CEYNLGAG 10
CEY LG G
Sbjct: 80 CEYLLGRG 87
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 CEYNLGAG 10
CEY LG G
Sbjct: 80 CEYLLGRG 87
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 YCEYN 6
YC+YN
Sbjct: 326 YCKYN 330
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 1 RYCEYNLGAG 10
R+C GAG
Sbjct: 555 RFCALTAGAG 564
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 1 RYCEYNLGAG 10
R+C GAG
Sbjct: 555 RFCALTAGAG 564
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 1 RYCEYNLGAG 10
R+C GAG
Sbjct: 555 RFCALTAGAG 564
>sp|SH_HRSVA|SMALL hydrophobic protein|Human respiratory syncytial virus A
Query: 1 RYCEYNL 7
+ CEYN+
Sbjct: 43 KLCEYNV 49
>sp|SH_HRSV|SMALL hydrophobic protein|Human respiratory syncytial virus
Query: 1 RYCEYNL 7
+ CEYN+
Sbjct: 43 KLCEYNV 49
>sp|SH_HRSS2|SMALL hydrophobic protein|Human respiratory syncytial virus A
Query: 1 RYCEYNL 7
+ CEYN+
Sbjct: 43 KLCEYNV 49
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 RYCEYNL 7
R+C YN+
Sbjct: 2961 RHCVYNM 2967
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 4 EYNLGA 9
EYN+GA
Sbjct: 628 EYNVGA 633
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 2 YCEYN 6
YC YN
Sbjct: 332 YCRYN 336
>sp|YVBA_VACCC|UNCHARACTERIZED 11.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YCEYNLGA 9
YC +LGA
Sbjct: 4 YCSNSLGA 11
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 2 YCEY 5
YCEY
Sbjct: 140 YCEY 143
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 YCEYN 6
YC YN
Sbjct: 333 YCTYN 337
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 2 YCEYN 6
YCEY+
Sbjct: 158 YCEYS 162
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 2 YCEYN 6
YCEY+
Sbjct: 158 YCEYS 162
>sp|NS2_HRSVB|NON-STRUCTURAL protein 2|Human respiratory syncytial virus B
Query: 1 RYCEYNLGAG 10
+Y EYN G
Sbjct: 80 KYTEYNTKYG 89
>sp|NS2_HRSVA|NON-STRUCTURAL protein 2|Human respiratory syncytial virus A
Query: 1 RYCEYNLGAG 10
+Y EYN G
Sbjct: 80 KYTEYNTKYG 89
>sp|NS2_HRSV1|NON-STRUCTURAL protein 2|Human respiratory syncytial virus B
Query: 1 RYCEYNLGAG 10
+Y EYN G
Sbjct: 80 KYTEYNTKYG 89
>sp|NS2_HRSV|NON-STRUCTURAL protein 2|Human respiratory syncytial virus
Query: 1 RYCEYNLGAG 10
+Y EYN G
Sbjct: 80 KYTEYNTKYG 89
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 4 EYNLGAG 10
EY+ GAG
Sbjct: 532 EYHAGAG 538
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 5 YNLGAG 10
YN GAG
Sbjct: 6456 YNYGAG 6461
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 5 YNLGAG 10
YN GAG
Sbjct: 6485 YNYGAG 6490
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 2 YCEYNLGA 9
+C+ +LGA
Sbjct: 6 FCQVHLGA 13
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 2 YCEYN 6
YC YN
Sbjct: 13 YCVYN 17
79|SequenceR|400|391|PSIGFRYCEY
>sp|YVEC_VACCC|UNCHARACTERIZED 8.0 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 GFRYCEY 10
G RYC Y
Sbjct: 48 GIRYCSY 54
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 4 GFRYCE 9
GFR+C+
Sbjct: 20 GFRFCQ 25
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 4 GFRYCEY 10
GFR+C++
Sbjct: 127 GFRHCDH 133
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 IGFRYC 8
IGFR C
Sbjct: 799 IGFRVC 804
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 3 IGFRYC 8
IGFR C
Sbjct: 799 IGFRVC 804
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 SIGFRYCEY 10
S GFR C +
Sbjct: 36 SNGFRACRF 44
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 SIGFRYCEY 10
S GFR C +
Sbjct: 36 SNGFRACRF 44
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 IGFRYCE 9
+ F YCE
Sbjct: 1048 LDFNYCE 1054
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 IGFRYCE 9
+ F YCE
Sbjct: 1048 LDFNYCE 1054
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 IGFRYCE 9
+ F YCE
Sbjct: 1048 LDFNYCE 1054
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 IGFRYCE 9
+ F YCE
Sbjct: 1048 LDFNYCE 1054
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 IGFRYCE 9
+ F YCE
Sbjct: 1048 LDFNYCE 1054
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 2 SIGFRYC 8
++G R+C
Sbjct: 685 AVGLRFC 691
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 PSIGFRYCE 9
PS+ + CE
Sbjct: 1094 PSVSLKACE 1102
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 GFRYCE 9
G R+CE
Sbjct: 107 GLRHCE 112
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 GFRYCE 9
G R+CE
Sbjct: 176 GLRHCE 181
80|SequenceR|405|396|LANTSPSIGF
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 NTSPSIGF 10
NTSPS G+
Sbjct: 463 NTSPSAGY 470
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 3 NTSPSIGF 10
NTSPS G+
Sbjct: 463 NTSPSAGY 470
>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 TSPSIGF 10
TSPS+GF
Sbjct: 404 TSPSMGF 410
>sp|PG034_MONPV|PROTEIN OPG034|Monkeypox virus (MPXV)
Query: 1 LANTSPSIGF 10
LA SP+IG+
Sbjct: 179 LAVLSPTIGY 188
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 1 LANTSPSI 8
L NT PSI
Sbjct: 678 LTNTMPSI 685
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 1 LANTSPSI 8
L NT PSI
Sbjct: 678 LTNTMPSI 685
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 ANTSPSI 8
ANT+P I
Sbjct: 472 ANTAPEI 478
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 ANTSPSI 8
ANT+P I
Sbjct: 473 ANTAPEI 479
>sp|DUT_HHV7J|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 7 (strain JI)
Query: 1 LANTSPSI 8
L NT+PS+
Sbjct: 315 LKNTTPSV 322
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 5 SPSIGF 10
SP++GF
Sbjct: 447 SPAVGF 452
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 5 SPSIGF 10
SP++GF
Sbjct: 447 SPAVGF 452
>sp|UL28_HCMVA|UNCHARACTERIZED protein UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 ANTSPSI 8
ANT+P I
Sbjct: 151 ANTAPEI 157
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 4 TSPSIGF 10
TSP +GF
Sbjct: 328 TSPYLGF 334
81|SequenceR|410|401|TAGIVLANTS
>sp|RP35_VAR67|DNA-DIRECTED RNA polymerase 35 kDa|Variola virus (isolate
Query: 3 GIVLANTS 10
GIVL+NTS
Sbjct: 38 GIVLSNTS 45
>sp|RP35_VACCT|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Tian Tan)
Query: 3 GIVLANTS 10
GIVL+NTS
Sbjct: 38 GIVLSNTS 45
>sp|RP35_VACCC|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 GIVLANTS 10
GIVL+NTS
Sbjct: 38 GIVLSNTS 45
>sp|RP35_VACCA|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 GIVLANTS 10
GIVL+NTS
Sbjct: 38 GIVLSNTS 45
>sp|RP35_MONPV|DNA-DIRECTED RNA polymerase 35 kDa|Monkeypox virus (MPXV)
Query: 3 GIVLANTS 10
G+VL NTS
Sbjct: 38 GVVLYNTS 45
>sp|DUT_HCMVM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 2 AGIVLANTS 10
AG+ + NTS
Sbjct: 282 AGVTVVNTS 290
>sp|DUT_HCMVA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 2 AGIVLANTS 10
AG+ + NTS
Sbjct: 282 AGVTVVNTS 290
>sp|NSP4_ROTJ1|NON-STRUCTURAL glycoprotein 4|Rotavirus X (strain
Query: 4 IVLANT 9
IVLANT
Sbjct: 185 IVLANT 190
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 2 AGIVLAN 8
G+VLAN
Sbjct: 128 GGVVLAN 134
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 TAGIVL 6
TAGIVL
Sbjct: 1032 TAGIVL 1037
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 TAGIVL 6
TAGIVL
Sbjct: 1032 TAGIVL 1037
82|SequenceR|415|406|FGEMVTAGIV
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 2 GEMVTAGIV 10
G+ VTAG+V
Sbjct: 1117 GDSVTAGVV 1125
>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United
Query: 1 FGEMVTAGIV 10
FG +T GI+
Sbjct: 484 FGRQITEGII 493
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 FGEMVTAGI 9
FG+ VT+G+
Sbjct: 925 FGDPVTSGL 933
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 FGEMVTAGI 9
FG+ VT+G+
Sbjct: 925 FGDPVTSGL 933
>sp|VU25_HHV6Z|PROTEIN U25|Human herpesvirus 6B (strain Z29)
Query: 2 GEMVTAGIV 10
GE+V G++
Sbjct: 62 GELVVVGVI 70
>sp|VU25_HHV6U|PROTEIN U25|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 GEMVTAGIV 10
GE+V G++
Sbjct: 62 GELVVVGVI 70
>sp|VU25_HHV6H|PROTEIN U25|Human herpesvirus 6B (HHV-6 variant
Query: 2 GEMVTAGIV 10
GE+V G++
Sbjct: 62 GELVVVGVI 70
83|SequenceR|420|411|DFIVYFGEMV
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 1 DFIVYFGEMV 10
D+I+YF +MV
Sbjct: 121 DYIMYFHDMV 130
>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain
Query: 1 DFIVYFGEMV 10
D+I+YF +MV
Sbjct: 121 DYIMYFHDMV 130
>sp|K42_HHV8P|PROTEIN K4.2|Human herpesvirus 8 type P
Query: 2 FIVYFGE 8
FIV FGE
Sbjct: 164 FIVAFGE 170
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 DFIVYFGEM 9
D I+Y GE+
Sbjct: 660 DNIIYVGEL 668
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 DFIVYFGEM 9
D I+Y GE+
Sbjct: 660 DNIIYVGEL 668
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 DFIVYFGEM 9
D I+Y GE+
Sbjct: 660 DNIIYVGEL 668
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 DFIVYFGEM 9
D I+Y GE+
Sbjct: 660 DNIIYVGEL 668
>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB
Query: 1 DFIVYFGEM 9
D I+Y GE+
Sbjct: 380 DNIIYVGEL 388
>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep
Query: 1 DFIVYFGEM 9
D I+Y GE+
Sbjct: 380 DNIIYVGEL 388
>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi
Query: 1 DFIVYFGEM 9
D I+Y GE+
Sbjct: 380 DNIIYVGEL 388
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 DFIVYFGEM 9
D I+Y GE+
Sbjct: 660 DNIIYVGEL 668
>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)
Query: 1 DFIVYFGEM 9
D I+Y GE+
Sbjct: 380 DNIIYVGEL 388
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 DFIVYFGEM 9
D I+Y GE+
Sbjct: 660 DNIIYVGEL 668
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 DFIVYFGEM 9
D I+Y GE+
Sbjct: 661 DNIIYVGEL 669
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 DFIVYFGEM 9
D I+Y GE+
Sbjct: 661 DNIIYVGEL 669
>sp|VEGFH_ORFN7|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ7) (OV
Query: 1 DFIVYFGE 8
D +VY GE
Sbjct: 50 DTVVYLGE 57
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 DFIVYF 6
DF+ YF
Sbjct: 148 DFVTYF 153
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 DFIVYF 6
DF+ YF
Sbjct: 130 DFVTYF 135
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 DFIVYFGEMV 10
+F+++FG ++
Sbjct: 912 EFVLHFGPVI 921
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 DFIVYFGEMV 10
+F+++FG ++
Sbjct: 912 EFVLHFGPVI 921
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 3 IVYFGEM 9
+VYFG +
Sbjct: 48 LVYFGNL 54
>sp|VL2_HPV50|MINOR capsid protein L2|Human papillomavirus type 50
Query: 3 IVYFGEM 9
+VYFG +
Sbjct: 47 LVYFGNL 53
>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P
Query: 3 IVYFGEMV 10
++YFG+ +
Sbjct: 102 LIYFGQFL 109
84|SequenceR|425|416|RKQARDFIVY
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RKQARDFIVY 10
RKQ D I+Y
Sbjct: 763 RKQNPDIIIY 772
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RKQARDFIVY 10
RKQ D ++Y
Sbjct: 759 RKQNPDLVIY 768
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RKQARDFIVY 10
RKQ D ++Y
Sbjct: 758 RKQNPDIVIY 767
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RKQARDFIVY 10
RKQ D ++Y
Sbjct: 761 RKQNPDIVIY 770
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RKQARDFIVY 10
RKQ D ++Y
Sbjct: 771 RKQNPDIVIY 780
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RKQARDFIVY 10
RKQ D ++Y
Sbjct: 759 RKQNPDIVIY 768
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RKQARDFIVY 10
RKQ D ++Y
Sbjct: 759 RKQNPDIVIY 768
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RKQARDFIVY 10
RKQ D ++Y
Sbjct: 765 RKQNPDIVIY 774
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RKQARDFIVY 10
RKQ D ++Y
Sbjct: 771 RKQNPDIVIY 780
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RKQARDFIVY 10
RKQ D ++Y
Sbjct: 759 RKQNPDIVIY 768
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RKQARDFIVY 10
RKQ D ++Y
Sbjct: 759 RKQNPDIVIY 768
>sp|VP7_ROTWI|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 4 ARDFIVY 10
A DFI+Y
Sbjct: 29 AMDFIIY 35
>sp|VP7_ROTHU|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 4 ARDFIVY 10
A DFI+Y
Sbjct: 29 AMDFIIY 35
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 KQARDFIVY 10
+ +DFI+Y
Sbjct: 2099 RDVKDFILY 2107
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 KQARDFIVY 10
+ +DFI+Y
Sbjct: 2099 RDVKDFILY 2107
>sp|VE5A_HPV6A|PROBABLE protein E5A|Human papillomavirus type 6a
Query: 6 DFIVY 10
DFIVY
Sbjct: 39 DFIVY 43
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RKQARDFIVY 10
+KQ D ++Y
Sbjct: 771 KKQNPDIVIY 780
85|SequenceR|430|421|AAFGVRKQAR
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 AFGVRKQAR 10
AFG + QAR
Sbjct: 386 AFGSKGQAR 394
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 1 AAFGVRKQ 8
AA+GVR++
Sbjct: 201 AAYGVREE 208
>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)
Query: 3 FGVRKQAR 10
+GVRK+ R
Sbjct: 31 YGVRKRDR 38
>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 FGVRKQAR 10
+GVRK+ R
Sbjct: 31 YGVRKRDR 38
86|SequenceR|435|426|EACPSAAFGV
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 EACPSAAFG 9
+ACP AFG
Sbjct: 380 DACPEVAFG 388
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 3 CPSAAFGV 10
CP +AFG+
Sbjct: 224 CPDSAFGL 231
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 3 CPSAAFGV 10
CP +AFG+
Sbjct: 224 CPDSAFGL 231
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 3 CPSAAFGV 10
CP +AFG+
Sbjct: 227 CPDSAFGL 234
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACNSAAF 338
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 2 ACPSAAF 8
AC SAAF
Sbjct: 332 ACHSAAF 338
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 CPSAAF 8
CPSAA
Sbjct: 1236 CPSAAL 1241
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 CPSAAF 8
CPSAA
Sbjct: 1236 CPSAAL 1241
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 CPSAAF 8
CPSAA
Sbjct: 1236 CPSAAL 1241
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 CPSAAF 8
CPSAA
Sbjct: 1236 CPSAAL 1241
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 CPSAAF 8
CPSAA
Sbjct: 1236 CPSAAL 1241
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 CPSAAF 8
CPSAA
Sbjct: 1211 CPSAAL 1216
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 CPSAAF 8
CPSAA
Sbjct: 1211 CPSAAL 1216
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 CPSAAF 8
CPSAA
Sbjct: 1210 CPSAAL 1215
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 CPSAAF 8
CPSAA
Sbjct: 1210 CPSAAL 1215
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 EACPSAAFGV 10
+AC AFG+
Sbjct: 40 QACRFVAFGL 49
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 EACPSAAFGV 10
+AC AFG+
Sbjct: 40 QACRFVAFGL 49
87|SequenceR|440|431|AAGAIEACPS
>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain
Query: 1 AAGAIEAC 8
AAG+I AC
Sbjct: 80 AAGSITAC 87
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 4 AIEACP 9
A+E+CP
Sbjct: 290 AVESCP 295
>sp|PG021_MONPZ|HOST range factor p28|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 3 GAIEACP 9
GA++ CP
Sbjct: 217 GALDNCP 223
>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean
Query: 2 AGAIEACP 9
AGA + CP
Sbjct: 309 AGAPDRCP 316
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 2 AGAIEACP 9
AGA + CP
Sbjct: 309 AGAPDRCP 316
>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo
Query: 2 AGAIEACP 9
AGA + CP
Sbjct: 309 AGAPDRCP 316
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 3 GAIEAC 8
GAIE C
Sbjct: 688 GAIEEC 693
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 GAIEAC 8
GAIE C
Sbjct: 688 GAIEEC 693
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AAGAIEAC 8
AAG EAC
Sbjct: 468 AAGLCEAC 475
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AAGAIEAC 8
AAG EAC
Sbjct: 468 AAGLCEAC 475
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 1 AAGAIEACPS 10
AAG I C S
Sbjct: 770 AAGEINPCTS 779
88|SequenceR|445|436|SIESVAAGAI
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 1 SIESVAAGAI 10
SI +VAAG+I
Sbjct: 438 SICTVAAGSI 447
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 SIESVAAGAI 10
SI +VAAG+I
Sbjct: 437 SICTVAAGSI 446
89|SequenceR|450|441|TSFPGSIESV
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SFPGSIESV 10
S PGS+E V
Sbjct: 530 SSPGSLEGV 538
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SFPGSIESV 10
S PGS+E V
Sbjct: 530 SSPGSLEGV 538
>sp|DUT_HCMVA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 3 FPGSIE 8
FPG+IE
Sbjct: 191 FPGTIE 196
>sp|DUT_HCMVM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 3 FPGSIE 8
FPG+IE
Sbjct: 191 FPGTIE 196
>sp|VL2_HPV09|MINOR capsid protein L2|Human papillomavirus 9
Query: 3 FPGSIESV 10
PG IES+
Sbjct: 128 LPGEIESI 135
>sp|UL64_HCMVA|UNCHARACTERIZED protein UL64|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SFPGSIES 9
++PGSI++
Sbjct: 5 TYPGSIQT 12
90|SequenceR|455|446|SAVDETSFPG
>sp|PG082_VARV|TELOMERE-BINDING protein OPG082|Variola virus
Query: 2 AVDETSFP 9
+ DE+SFP
Sbjct: 251 SFDESSFP 258
>sp|PG082_VAR67|TELOMERE-BINDING protein OPG082|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 AVDETSFP 9
+ DE+SFP
Sbjct: 251 SFDESSFP 258
>sp|PG082_VACCC|TELOMERE-BINDING protein OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 AVDETSFP 9
+ DE+SFP
Sbjct: 251 SFDESSFP 258
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 4 DETSFPG 10
D+T++PG
Sbjct: 108 DDTNYPG 114
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 VDETSFPG 10
VDE + PG
Sbjct: 837 VDEKTVPG 844
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 4 DETSFPG 10
D+T++PG
Sbjct: 108 DDTNYPG 114
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 4 DETSFPG 10
D+T++PG
Sbjct: 108 DDTNYPG 114
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 4 DETSFPG 10
D+T++PG
Sbjct: 108 DDTNYPG 114
>sp|SPIKE_ADE07|FIBER protein|Human adenovirus B serotype 7
Query: 1 SAVDETSFP 9
+A D T+FP
Sbjct: 280 TASDHTAFP 288
>sp|VL2_HPV35|MINOR capsid protein L2|Human papillomavirus 35
Query: 1 SAVDETSF 8
S V+ETSF
Sbjct: 111 SLVEETSF 118
>sp|VL2_HPV16|MINOR capsid protein L2|Human papillomavirus type 16
Query: 1 SAVDETSF 8
S V+ETSF
Sbjct: 107 SLVEETSF 114
>sp|SPIKE_ADE1P|FIBER protein|Human adenovirus B serotype 11
Query: 1 SAVDETSFP 9
+A D T+FP
Sbjct: 262 TASDRTAFP 270
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 VDETSFPG 10
VD T+ PG
Sbjct: 883 VDSTNVPG 890
91|SequenceR|460|451|APVCNSAVDE
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 1 APVCNSAVDE 10
APVC++A D+
Sbjct: 172 APVCDNAGDQ 181
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 PVCNSAVDE 10
P CN +DE
Sbjct: 94 PTCNQFLDE 102
>sp|VE7_HPV10|PROTEIN E7|Human papillomavirus type 10
Query: 2 PVCNSAVDE 10
PVCN +DE
Sbjct: 21 PVCNVQLDE 29
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 VCNSAVD 9
VCNSA D
Sbjct: 792 VCNSAQD 798
>sp|NEF_HV1U4|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PVCNSAVDE 10
P+C VD+
Sbjct: 167 PICQHGVDD 175
>sp|NEF_HV1YB|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PVCNSAVDE 10
P+C VD+
Sbjct: 168 PICQHGVDD 176
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 VCNSAV 8
+CNSAV
Sbjct: 436 ICNSAV 441
>sp|UL15A_HCMVA|UNCHARACTERIZED protein UL15A|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 APVCNSA 7
AP+C S
Sbjct: 29 APICGSG 35
>sp|GLRX1_VARV|GLUTAREDOXIN-1 virus
Query: 2 PVCNSAVD 9
P C +A+D
Sbjct: 24 PFCRNALD 31
>sp|GLRX1_VAR67|GLUTAREDOXIN-1 virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 PVCNSAVD 9
P C +A+D
Sbjct: 24 PFCRNALD 31
>sp|GLRX1_VACCT|GLUTAREDOXIN-1 virus (strain Tian Tan)
Query: 2 PVCNSAVD 9
P C +A+D
Sbjct: 24 PFCRNALD 31
>sp|GLRX1_VACCP|GLUTAREDOXIN-1 virus (strain L-IVP) (VACV)
Query: 2 PVCNSAVD 9
P C +A+D
Sbjct: 24 PFCRNALD 31
>sp|GLRX1_VACCC|GLUTAREDOXIN-1 virus (strain Copenhagen) (VACV)
Query: 2 PVCNSAVD 9
P C +A+D
Sbjct: 24 PFCRNALD 31
>sp|GLRX1_VACCA|GLUTAREDOXIN-1 virus (strain Ankara) (VACV)
Query: 2 PVCNSAVD 9
P C +A+D
Sbjct: 24 PFCRNALD 31
>sp|GLRX1_MONPV|GLUTAREDOXIN-1 virus (MPXV)
Query: 2 PVCNSAVD 9
P C +A+D
Sbjct: 24 PFCRNALD 31
>sp|GLRX1_CWPXG|GLUTAREDOXIN-1 virus (strain GRI-90 /
Query: 2 PVCNSAVD 9
P C +A+D
Sbjct: 24 PFCRNALD 31
>sp|GLRX1_CWPXB|GLUTAREDOXIN-1 virus (strain Brighton Red)
Query: 2 PVCNSAVD 9
P C +A+D
Sbjct: 24 PFCRNALD 31
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 VCNSAV 8
+CNSAV
Sbjct: 436 ICNSAV 441
>sp|EBNA1_EBVG|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 APVCNSAV 8
AP CN V
Sbjct: 588 APTCNIKV 595
92|SequenceR|465|456|ESLSQAPVCN
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 1 ESLSQAPVCN 10
E +APVC+
Sbjct: 167 EYWDKAPVCD 176
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 ESLSQAPVC 9
E++ AP+C
Sbjct: 6 ETVVSAPIC 14
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 1 ESLSQAPVC 9
E +APVC
Sbjct: 167 EHWDKAPVC 175
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 1 ESLSQAPVC 9
E +APVC
Sbjct: 167 EHWDRAPVC 175
93|SequenceR|470|461|IWLIPESLSQ
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 WLIPESLSQ 10
W +P++LSQ
Sbjct: 149 WKLPDALSQ 157
Query: 2 WLIPE 6
WL+PE
Sbjct: 1469 WLVPE 1473
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 4 IPESLSQ 10
IPES+SQ
Sbjct: 548 IPESISQ 554
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 WLIPE 6
WLIPE
Sbjct: 1488 WLIPE 1492
>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)
Query: 2 WLIPESLSQ 10
WL+P+ L +
Sbjct: 167 WLLPQQLCR 175
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 WLIPESLSQ 10
WL+P+ L +
Sbjct: 154 WLLPQQLCR 162
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 WLIPES 7
W+IPE+
Sbjct: 1482 WIIPET 1487
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 WLIPES 7
W+IPE+
Sbjct: 1482 WIIPET 1487
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 WLIPES 7
W+IPE+
Sbjct: 1482 WIIPET 1487
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 WLIPE 6
WL+PE
Sbjct: 1478 WLVPE 1482
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 WLIPES 7
W+IPE+
Sbjct: 1482 WIIPET 1487
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 WLIPE 6
WL+PE
Sbjct: 1490 WLVPE 1494
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 WLIPE 6
WL+PE
Sbjct: 1481 WLVPE 1485
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 WLIPE 6
WL+PE
Sbjct: 1470 WLVPE 1474
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 WLIPE 6
WL+PE
Sbjct: 1470 WLVPE 1474
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 WLIPE 6
WL+PE
Sbjct: 1480 WLVPE 1484
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 WLIPE 6
WL+PE
Sbjct: 1471 WLVPE 1475
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 WLIPES 7
W+IPE+
Sbjct: 1482 WIIPET 1487
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 WLIPE 6
WL+PE
Sbjct: 1471 WLVPE 1475
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 WLIPE 6
WL+PE
Sbjct: 1480 WLVPE 1484
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 WLIPE 6
WL+PE
Sbjct: 1472 WLVPE 1476
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 WLIPE 6
WL+PE
Sbjct: 1472 WLVPE 1476
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 WLIPE 6
WL+PE
Sbjct: 1474 WLVPE 1478
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 WLIPE 6
WL+PE
Sbjct: 1482 WLVPE 1486
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 WLIPE 6
WL+PE
Sbjct: 1483 WLVPE 1487
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 WLIPE 6
WL+PE
Sbjct: 1472 WLVPE 1476
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 IWLIPESL 8
+WL PE L
Sbjct: 668 LWLHPEGL 675
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 IWLIPES 7
IW IPE+
Sbjct: 900 IWSIPEA 906
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 IWLIPES 7
IW IPE+
Sbjct: 900 IWSIPEA 906
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 IWLIPES 7
IW IPE+
Sbjct: 900 IWSIPEA 906
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 IWLIPES 7
IW IPE+
Sbjct: 900 IWSIPEA 906
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 IWLIPES 7
+W +PES
Sbjct: 902 VWSVPES 908
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 IWLIPESL 8
+WL PE L
Sbjct: 668 LWLHPEGL 675
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 IWLIPESL 8
+WL PE L
Sbjct: 668 LWLHPEGL 675
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 IWLIPES 7
IW +PE+
Sbjct: 900 IWSVPEA 906
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 WLIPESLSQ 10
WL+P++ +
Sbjct: 19 WLLPDAAEE 27
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 WLIPESLSQ 10
WL+P++ +
Sbjct: 19 WLLPDAAEE 27
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 WLIPESLSQ 10
WL+P++ +
Sbjct: 19 WLLPDAAEE 27
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 WLIPESLSQ 10
WL+P++ +
Sbjct: 19 WLLPDAAEE 27
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 WLIPESLSQ 10
WL+P++ +
Sbjct: 19 WLLPDAAEE 27
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 WLIPESLSQ 10
WL+P++ +
Sbjct: 19 WLLPDAAEE 27
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 IWLIPES 7
IW +PE+
Sbjct: 900 IWSVPEA 906
>sp|ORF24_TTVV7|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 2 WLIPE 6
WL+PE
Sbjct: 210 WLLPE 214
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 2 WLIPESL 8
WLIP L
Sbjct: 24 WLIPRYL 30
>sp|BARF1_EBVG|SECRETED protein BARF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 WLIPESL 8
WL+PE +
Sbjct: 158 WLMPEGV 164
>sp|BARF1_EBVB9|SECRETED protein BARF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 WLIPESL 8
WL+PE +
Sbjct: 158 WLMPEGV 164
>sp|BARF1_EBVA8|SECRETED protein BARF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 WLIPESL 8
WL+PE +
Sbjct: 158 WLMPEGV 164
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 IWLIPES 7
+W +PE+
Sbjct: 902 VWSVPEA 908
94|SequenceR|475|466|LAYSVIWLIP
>sp|C_VSNJM|PROTEIN C'|Vesicular stomatitis New Jersey virus
Query: 5 VIWLIP 10
+IW++P
Sbjct: 2 IIWILP 7
>sp|C_VSNJO|PROTEIN C'|Vesicular stomatitis New Jersey virus
Query: 5 VIWLIP 10
+IW++P
Sbjct: 2 IIWILP 7
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 AYSVIWLI 9
AY+ +WL+
Sbjct: 3291 AYAQMWLV 3298
>sp|UL20_HHV2H|PROTEIN UL20|Human herpesvirus 2 (strain HG52)
Query: 1 LAYSVIWL 8
LAY V WL
Sbjct: 103 LAYYVTWL 110
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 AYSVIWLI 9
AY+ +WL+
Sbjct: 3289 AYAQMWLL 3296
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 AYSVIWLI 9
AY+ +WL+
Sbjct: 3291 AYAQMWLL 3298
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 AYSVIWLI 9
AY+ +WL+
Sbjct: 3289 AYAQMWLL 3296
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 AYSVIWLI 9
AY+ +WL+
Sbjct: 3289 AYAQMWLL 3296
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 AYSVIWLI 9
AY+ +WL+
Sbjct: 3289 AYAQMWLL 3296
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 AYSVIWLI 9
AY+ +WL+
Sbjct: 3282 AYAQMWLL 3289
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 AYSVIWLI 9
AY+ +WL+
Sbjct: 3280 AYAQMWLL 3287
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 AYSVIWLI 9
AY+ +WL+
Sbjct: 3282 AYAQMWLL 3289
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 AYSVIWLI 9
AY+ +WL+
Sbjct: 3260 AYAQMWLL 3267
95|SequenceR|480|471|GCVSMLAYSV
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 2 CVSMLAY 8
CV+++AY
Sbjct: 516 CVTVMAY 522
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 2 CVSMLAY 8
CV+++AY
Sbjct: 515 CVTVMAY 521
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 2 CVSMLAY 8
CV+++AY
Sbjct: 515 CVTVMAY 521
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 2 CVSMLAY 8
CV+++AY
Sbjct: 515 CVTVMAY 521
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 2 CVSMLAY 8
CV+++AY
Sbjct: 516 CVTVMAY 522
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 2 CVSMLAY 8
CV+++AY
Sbjct: 515 CVTVMAY 521
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 2 CVSMLAY 8
CV+++AY
Sbjct: 515 CVTVMAY 521
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 2 CVSMLAY 8
CV+++AY
Sbjct: 515 CVTVMAY 521
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 CVSMLAYSV 10
C+++L Y V
Sbjct: 1682 CIALLLYDV 1690
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 VSMLAY 8
+SMLAY
Sbjct: 1990 ISMLAY 1995
>sp|PG038_VACCC|EARLY protein OPG038|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CVSMLAYSV 10
C++ L YSV
Sbjct: 10 CIASLGYSV 18
>sp|PG038_VARV|EARLY protein OPG038|Variola virus
Query: 2 CVSMLAYSV 10
C++ L YSV
Sbjct: 10 CIASLGYSV 18
>sp|PG038_VAR67|EARLY protein OPG038|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 CVSMLAYSV 10
C++ L YSV
Sbjct: 10 CIASLGYSV 18
>sp|PG038_MONPV|EARLY protein OPG038|Monkeypox virus (MPXV)
Query: 2 CVSMLAYSV 10
C++ L YSV
Sbjct: 10 CIASLGYSV 18
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 CVSMLAYSV 10
CVS L +SV
Sbjct: 222 CVSDLHFSV 230
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 CVSMLAYSV 10
C+ +L Y V
Sbjct: 1682 CIGLLLYDV 1690
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 2 CVSMLAYSV 10
C+++L Y V
Sbjct: 1682 CMALLLYDV 1690
96|SequenceR|485|476|VLLIAGCVSM
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 LIAGCVSM 10
LIAGCV +
Sbjct: 3795 LIAGCVEL 3802
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 1 VLLIAGCVSM 10
VLLIAG M
Sbjct: 253 VLLIAGAAKM 262
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 VLLIAGC 7
VLL++GC
Sbjct: 1171 VLLVSGC 1177
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 LLIAGC 7
+LIAGC
Sbjct: 1568 VLIAGC 1573
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 LLIAGC 7
+LIAGC
Sbjct: 1568 VLIAGC 1573
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 LLIAGC 7
+LIAGC
Sbjct: 1568 VLIAGC 1573
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 2 LLIAGC 7
+LIAGC
Sbjct: 1582 VLIAGC 1587
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 LLIAGC 7
+LIAGC
Sbjct: 1568 VLIAGC 1573
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 LLIAGC 7
+LIAGC
Sbjct: 1568 VLIAGC 1573
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 LIAGC 7
LIAGC
Sbjct: 1584 LIAGC 1588
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 LIAGC 7
LIAGC
Sbjct: 1584 LIAGC 1588
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 3 LIAGC 7
LIAGC
Sbjct: 1567 LIAGC 1571
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 VLLIAGCV 8
+L +AGCV
Sbjct: 220 ILHLAGCV 227
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 2 LLIAGC 7
LLI GC
Sbjct: 155 LLIVGC 160
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 2 LLIAGC 7
LLI GC
Sbjct: 157 LLIVGC 162
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 2 LLIAGC 7
LLI GC
Sbjct: 155 LLIVGC 160
97|SequenceR|490|481|LLVILVLLIA
***** No hits found ******
98|SequenceR|495|486|RFPLLLLVIL
***** No hits found ******
99|SequenceR|500|491|PRRQCRFPLL
>sp|VE4_HPV54|PROTEIN E4|Human papillomavirus type 54
Query: 1 PRRQCRFPLL 10
P+R C++PLL
Sbjct: 7 PKRHCQYPLL 16
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 1 PRRQCRFPLL 10
P R CRF LL
Sbjct: 166 PARGCRFNLL 175
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 PRRQCRFPLL 10
P R+C FP +
Sbjct: 806 PNRECYFPTV 815
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 PRRQCRFPLL 10
P R+C FP +
Sbjct: 806 PNRECYFPTV 815
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 RRQCRFP 8
+ QCRFP
Sbjct: 397 QEQCRFP 403
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 PRRQCRFPLL 10
P C FPLL
Sbjct: 24 PTDHCVFPLL 33
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PRRQCRFPLL 10
P C FPLL
Sbjct: 24 PTDHCVFPLL 33
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PRRQCRFPLL 10
P C FPLL
Sbjct: 24 PTDHCVFPLL 33
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 PRRQCRF 7
PRR C++
Sbjct: 820 PRRLCQY 826
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 1 PRRQCR 6
P+R CR
Sbjct: 13 PKRTCR 18
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 1 PRRQCR 6
P+R CR
Sbjct: 13 PKRTCR 18
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 2 RRQCRF 7
R+QC+F
Sbjct: 225 RQQCQF 230
>sp|US08_HCMVM|MEMBRANE glycoprotein US8|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PRRQCRFP 8
P RQ RFP
Sbjct: 50 PARQFRFP 57
>sp|US08_HCMVA|UNIQUE short US8 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 PRRQCRFP 8
P RQ RFP
Sbjct: 50 PARQFRFP 57
>sp|GN_HHV11|ENVELOPE glycoprotein N|Human herpesvirus 1 (strain 17)
Query: 1 PRRQCR 6
PRR CR
Sbjct: 4 PRRVCR 9
>sp|VE4_HPV57|PROTEIN E4|Human papillomavirus 57
Query: 1 PRRQCRFPLL 10
PR +PLL
Sbjct: 11 PRTTTHYPLL 20
100|SequenceR|505|496|VEPDRPRRQC
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EPDRPRR 8
EPDRP R
Sbjct: 726 EPDRPER 732
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 PDRPR 7
PDRPR
Sbjct: 730 PDRPR 734
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EPDRP 6
EPDRP
Sbjct: 716 EPDRP 720
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 PDRPRR 8
PD PRR
Sbjct: 830 PDSPRR 835
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 PDRPRR 8
PD PRR
Sbjct: 830 PDSPRR 835
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 PDRPRR 8
PD PRR
Sbjct: 826 PDSPRR 831
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 PDRPRR 8
PD PRR
Sbjct: 904 PDSPRR 909
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 VEPDRPRR 8
+ PDRP++
Sbjct: 864 LRPDRPQK 871
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PDRPRRQC 10
PD+P R C
Sbjct: 747 PDKPPRLC 754
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PDRPRR 8
PDRP R
Sbjct: 460 PDRPSR 465
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PDRPRRQC 10
PD+P R C
Sbjct: 746 PDKPPRLC 753
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 3 PDRPRRQ 9
PDR RR+
Sbjct: 633 PDRTRRK 639
101|SequenceR|510|501|SEDNVVEPDR
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 2 EDNVVEPD 9
ED+V +PD
Sbjct: 50 EDDVFDPD 57
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 EDNVVEPD 9
ED+V +PD
Sbjct: 50 EDDVFDPD 57
>sp|IR08_HCMVA|UNCHARACTERIZED protein IRL8|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 EDNVVEPDR 10
ED +V P+R
Sbjct: 25 EDGMVSPER 33
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 EDNVVEPD 9
E N+V+P+
Sbjct: 406 EGNIVQPE 413
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 SEDNVVEPD 9
S NVV PD
Sbjct: 1208 SHSNVVFPD 1216
>sp|VE7_HPV39|PROTEIN E7|Human papillomavirus 39
Query: 1 SEDNVVEPD 9
SED + EPD
Sbjct: 35 SEDEIDEPD 43
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 EDNVVEP 8
ED VV+P
Sbjct: 697 EDKVVDP 703
102|SequenceR|518|506|KWRHRVLSSEDNV
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 2 WRHRVLSSED 11
WRHR +S +
Sbjct: 727 WRHRTAASNE 736
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 KWRHRVL 7
KW HR+L
Sbjct: 1341 KWAHRLL 1347
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 WRHRVLS 8
WRHR S
Sbjct: 2920 WRHRAWS 2926
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WRHRVLS 8
WRHR S
Sbjct: 2919 WRHRARS 2925
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WRHRVLS 8
WRHR S
Sbjct: 2919 WRHRARS 2925
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WRHRVLS 8
WRHR S
Sbjct: 2919 WRHRARS 2925
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WRHRVLS 8
WRHR S
Sbjct: 2919 WRHRARS 2925
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WRHRVLS 8
WRHR S
Sbjct: 2919 WRHRARS 2925
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WRHRVLS 8
WRHR S
Sbjct: 2920 WRHRARS 2926
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WRHRVLS 8
WRHR S
Sbjct: 2919 WRHRARS 2925
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WRHRVLS 8
WRHR S
Sbjct: 2919 WRHRARS 2925
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 WRHRVLS 8
WRHR S
Sbjct: 2920 WRHRARS 2926
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 WRHRVLS 8
WRHR S
Sbjct: 2920 WRHRARS 2926
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 WRHRVLS 8
WRHR S
Sbjct: 2920 WRHRARS 2926
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 2 WRHRVLSSEDN 12
WR R+L ++++
Sbjct: 219 WRKRILRTQES 229
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 2 WRHRVLSSEDN 12
WR R+L ++++
Sbjct: 219 WRKRILRTQES 229
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 WRHR 5
WRHR
Sbjct: 2924 WRHR 2927
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 WRHR 5
WRHR
Sbjct: 2925 WRHR 2928
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 WRHR 5
WRHR
Sbjct: 2922 WRHR 2925
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 WRHR 5
WRHR
Sbjct: 2932 WRHR 2935
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 WRHR 5
WRHR
Sbjct: 2928 WRHR 2931
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 WRHR 5
WRHR
Sbjct: 2923 WRHR 2926
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 WRHR 5
WRHR
Sbjct: 2930 WRHR 2933
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 WRHR 5
WRHR
Sbjct: 2930 WRHR 2933
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 WRHR 5
WRHR
Sbjct: 2931 WRHR 2934
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 WRHR 5
WRHR
Sbjct: 293 WRHR 296
Query: 2 WRHR 5
WRHR
Sbjct: 2928 WRHR 2931
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 WRHR 5
WRHR
Sbjct: 2923 WRHR 2926
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 WRHR 5
WRHR
Sbjct: 2927 WRHR 2930
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 WRHR 5
WRHR
Sbjct: 2917 WRHR 2920
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 WRHR 5
WRHR
Sbjct: 2928 WRHR 2931
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 KWRHRVLSSEDNV 13
+ + RVL +DNV
Sbjct: 3858 RLQARVLPEQDNV 3870
>sp|VE8E2_HPV18|PROTEIN E8^E2C|Human papillomavirus type 18
Query: 1 KWR-HRVLSSEDNV 13
KW+ HR +S+D V
Sbjct: 5 KWKQHRFSTSDDTV 18
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 4 HRVLSSEDNV 13
+RVLSS NV
Sbjct: 1663 YRVLSSVSNV 1672
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 4 HRVLSSEDNV 13
+RVLSS NV
Sbjct: 1663 YRVLSSVSNV 1672
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 WRHRVLSS 9
W H +LS+
Sbjct: 415 WHHMILST 422
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 WRHRVLSS 9
W H +LS+
Sbjct: 400 WHHMILST 407
>sp|MB43_HHV11|MEMBRANE protein UL43|Human herpesvirus 1 (strain 17)
Query: 4 HRVLSSED 11
HR +S ED
Sbjct: 7 HRAVSPED 14
>sp|PG072_MONPV|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Monkeypox virus (MPXV)
Query: 3 RHRVLSSEDN 12
RH ++ EDN
Sbjct: 48 RHATIAIEDN 57
>sp|PG072_VARV|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Variola virus
Query: 3 RHRVLSSEDN 12
RH ++ EDN
Sbjct: 48 RHATIAIEDN 57
>sp|PG072_VAR67|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Variola virus (isolate
Query: 3 RHRVLSSEDN 12
RH ++ EDN
Sbjct: 48 RHATIAIEDN 57
>sp|PG072_VACCC|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Vaccinia virus (strain
Query: 3 RHRVLSSEDN 12
RH ++ EDN
Sbjct: 48 RHATIAIEDN 57
>sp|UL88_HHV6Z|PROTEIN U59|Human herpesvirus 6B (strain Z29)
Query: 1 KWRHRV 6
KW+H V
Sbjct: 119 KWKHAV 124
>sp|UL88_HHV6U|PROTEIN U59|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KWRHRV 6
KW+H V
Sbjct: 119 KWKHAV 124
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 4 HRVLSSEDNV 13
HR+ S DN+
Sbjct: 2135 HRMTESMDNI 2144
>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 WRHRVLSSEDN 12
W+ R+L ++++
Sbjct: 219 WKKRILRTQES 229
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 WRHRVLSSEDN 12
W H + E+N
Sbjct: 188 WHHGAVQYENN 198
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 WRHRVLSSEDN 12
W H + E+N
Sbjct: 188 WHHGAVQYENN 198
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 WRHRVLSSEDN 12
W H + E+N
Sbjct: 187 WHHGAVQYENN 197
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 WRHRVLSSEDN 12
W H + E+N
Sbjct: 188 WHHGAVQYENN 198
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 WRHRVLSSEDN 12
W H + E+N
Sbjct: 186 WHHGAVQYENN 196
>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New
Query: 2 WRHRVLSSEDN 12
W+ R+L ++++
Sbjct: 219 WKKRILRTQES 229
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 2 WRHRVLSSEDN 12
W+ R+L ++++
Sbjct: 219 WKKRILRTQES 229
>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996
Query: 2 WRHRVLSSEDN 12
W+ R+L ++++
Sbjct: 219 WKKRILRTQES 229
THE END