ADA10_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|LLILVRLLVM

***** No hits found ******


2|SequenceR|15|6|AAWSLLLILV

***** No hits found ******


3|SequenceR|20|11|QGGMGAAWSL

>sp|Y2580_AERPE|UNCHARACTERIZED protein APE_2580|Aeropyrum pernix (strain ATCC 700893

Query: 2 GGMGAAW 8
GGM AAW
Sbjct: 30 GGMLAAW 36


>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 GMGAAWSL 10
G+G WSL
Sbjct: 91 GVGVPWSL 98


>sp|Y120_METTH|PUTATIVE NADH dehydrogenase/NAD(P)H nitroreductase|Methanothermobacter

Query: 3 GMGAAWS 9
G+GA W+
Sbjct: 132 GLGAVWT 138


>sp|Y772_SACI1|PROTEIN YN1551_0772|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 GGMGAAW 8
GG+G W
Sbjct: 71 GGLGPTW 77


>sp|Y2186_SACI2|PROTEIN LS215_2186|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 GGMGAAW 8
GG+G W
Sbjct: 71 GGLGPTW 77


>sp|Y2147_SACI7|PROTEIN YG5714_2147|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 GGMGAAW 8
GG+G W
Sbjct: 71 GGLGPTW 77


>sp|Y2099_SACI3|PROTEIN M1627_2099|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 GGMGAAW 8
GG+G W
Sbjct: 71 GGLGPTW 77


>sp|Y2028_SACI6|PROTEIN M164_2028|Saccharolobus islandicus (strain M.16.4 /

Query: 2 GGMGAAW 8
GG+G W
Sbjct: 71 GGLGPTW 77


>sp|Y2021_SACI4|PROTEIN M1425_2021|Saccharolobus islandicus (strain M.14.25 /

Query: 2 GGMGAAW 8
GG+G W
Sbjct: 71 GGLGPTW 77


>sp|Y103_SACS2|PROTEIN SSO0103|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GGMGAAW 8
GG+G W
Sbjct: 79 GGLGPTW 85


>sp|MSRA_METM7|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 3 GMGAAWS 9
GMG WS
Sbjct: 10 GMGCFWS 16


>sp|MSRA_METM6|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 3 GMGAAWS 9
GMG WS
Sbjct: 10 GMGCFWS 16


>sp|MSRA_METM5|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 3 GMGAAWS 9
GMG WS
Sbjct: 10 GMGCFWS 16




4|SequenceR|25|16|LPNGYQGGMG

>sp|CAS7_HALVD|CRISPR-ASSOCIATED protein Cas7|Haloferax volcanii (strain ATCC 29605

Query: 1 LPNGYQG 7
LPN YQG
Sbjct: 135 LPNNYQG 141


>sp|THSA_THEK8|CHAPERONIN subunit alpha|Thermococcus sp. (strain KS-8)

Query: 2 PNGYQGGM 9
PNG GGM
Sbjct: 538 PNGCMGGM 545


>sp|Y421_METJA|UNCHARACTERIZED protein MJ0421|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PNGYQG 7
P+GYQG
Sbjct: 32 PDGYQG 37


>sp|MAP2_SACS2|METHIONINE aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LPNGYQGGMG 10
+PN Y+ G+G
Sbjct: 169 IPNVYERGLG 178


>sp|GLCV_SACS2|GLUCOSE import ATP-binding protein GlcV|Saccharolobus solfataricus (strain

Query: 4 GYQGGM 9
GYQGG+
Sbjct: 305 GYQGGL 310


>sp|Y160_METLZ|PUTATIVE HTH-type transcriptional regulatory protein|Methanocorpusculum

Query: 5 YQGGMG 10
Y+GGMG
Sbjct: 160 YEGGMG 165


>sp|RL6_PYRAE|LARGE ribosomal subunit protein uL6|Pyrobaculum aerophilum (strain ATCC

Query: 2 PNGYQGGMG 10
P+G +GG+G
Sbjct: 173 PHGREGGLG 181


>sp|Y1637_METJA|UNCHARACTERIZED protein MJ1637|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NGYQGGM 9
NGY GG+
Sbjct: 18 NGYTGGI 24


>sp|RNP3_METTH|RIBONUCLEASE P protein component 3|Methanothermobacter thermautotrophicus

Query: 4 GYQGGM 9
GYQGG+
Sbjct: 34 GYQGGV 39


>sp|GATB_METVS|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus vannielii (strain ATCC

Query: 1 LPNGYQ 6
LP+GYQ
Sbjct: 92 LPSGYQ 97


>sp|GATB_METTH|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanothermobacter thermautotrophicus

Query: 1 LPNGYQ 6
LP+GYQ
Sbjct: 85 LPSGYQ 90


>sp|GATB_METMP|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain DSM

Query: 1 LPNGYQ 6
LP+GYQ
Sbjct: 92 LPSGYQ 97


>sp|GATB_METM7|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C7 /

Query: 1 LPNGYQ 6
LP+GYQ
Sbjct: 92 LPSGYQ 97


>sp|GATB_METM6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C6 /

Query: 1 LPNGYQ 6
LP+GYQ
Sbjct: 92 LPSGYQ 97


>sp|GATB_METM5|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C5 /

Query: 1 LPNGYQ 6
LP+GYQ
Sbjct: 92 LPSGYQ 97


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 LPNGYQ 6
LP+GYQ
Sbjct: 89 LPSGYQ 94


>sp|GATB_METJA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanocaldococcus jannaschii (strain

Query: 1 LPNGYQ 6
LP+GYQ
Sbjct: 95 LPSGYQ 100


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 1 LPNGYQ 6
LP+GYQ
Sbjct: 92 LPSGYQ 97


>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 GYQGGM 9
GYQGG+
Sbjct: 365 GYQGGV 370


>sp|THS_METKA|THERMOSOME subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 LPNGYQGGMG 10
LP GYQ +G
Sbjct: 14 LPEGYQRFVG 23


>sp|GATB_METS3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanobrevibacter smithii (strain

Query: 1 LPNGYQ 6
LP+GYQ
Sbjct: 85 LPSGYQ 90


>sp|PURL_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus gammatolerans (strain DSM 15229

Query: 3 NGYQGGMG 10
N YQG MG
Sbjct: 442 NPYQGAMG 449


>sp|AGLUS_METJA|ARCHAEAL glutamate synthase [NADPH]|Methanocaldococcus jannaschii (strain

Query: 3 NGYQGGMG 10
+GY+GG G
Sbjct: 344 DGYKGGTG 351


>sp|CDC6A_HALMA|ORC1-TYPE DNA replication protein 1|Haloarcula marismortui (strain ATCC 43049

Query: 2 PNGYQGGM 9
P GY GM
Sbjct: 120 PTGYPSGM 127


>sp|PURP_PYRFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PNGYQGGMG 10
P+G +GG G
Sbjct: 133 PHGAKGGKG 141


>sp|PURP_PYRHO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus horikoshii (strain ATCC

Query: 2 PNGYQGGMG 10
P+G +GG G
Sbjct: 132 PHGAKGGRG 140


>sp|PURP_PYRAB|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus abyssi (strain GE5 /

Query: 2 PNGYQGGMG 10
P+G +GG G
Sbjct: 136 PHGAKGGRG 144


>sp|MPTA_METVS|GTP cyclohydrolase MptA|Methanococcus vannielii (strain ATCC 35089

Query: 1 LPNGYQGG 8
+PNGY G
Sbjct: 210 VPNGYTVG 217


>sp|MPTA_METMP|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain DSM 14266

Query: 1 LPNGYQGG 8
+PNGY G
Sbjct: 210 VPNGYTVG 217


>sp|MPTA_METM6|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C6 /

Query: 1 LPNGYQGG 8
+PNGY G
Sbjct: 210 VPNGYTVG 217


>sp|MPTA_METM5|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C5 /

Query: 1 LPNGYQGG 8
+PNGY G
Sbjct: 210 VPNGYAVG 217


>sp|RL18_METBF|LARGE ribosomal subunit protein uL18|Methanosarcina barkeri (strain

Query: 1 LPNGYQGGM 9
L GY+GG+
Sbjct: 94 LKKGYEGGI 102




5|SequenceR|30|21|RIYKNLPNGY

>sp|ARLY_SACS2|ARGININOSUCCINATE lyase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IYKNLPNGY 10
IYK LP GY
Sbjct: 295 IYKGLPTGY 303


>sp|ARLY_SULTO|ARGININOSUCCINATE lyase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IYKNLPNGY 10
IYK LP+GY
Sbjct: 298 IYKGLPSGY 306


>sp|ARLY_SULAC|ARGININOSUCCINATE lyase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IYKNLPNGY 10
IYK LP+GY
Sbjct: 298 IYKGLPSGY 306


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 3 YKNLPNGY 10
YK+L NGY
Sbjct: 273 YKDLANGY 280


>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 3 YKNLPNGY 10
YK+L NGY
Sbjct: 273 YKDLANGY 280


>sp|GCS2_HALLT|GLUTAMATE--CYSTEINE ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 RIYKNLPN 8
+I++NLPN
Sbjct: 185 KIFENLPN 192


>sp|Y1567_ARCFU|UNCHARACTERIZED protein AF_1567|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IYKNLPNG 9
IY NLPNG
Sbjct: 45 IYYNLPNG 52


>sp|RL34_METS3|LARGE ribosomal subunit protein eL34|Methanobrevibacter smithii (strain

Query: 1 RIYKNLPNG 9
R+YKN P G
Sbjct: 13 RVYKNTPGG 21


>sp|RTCB_METMP|TRNA-SPLICING ligase RtcB|Methanococcus maripaludis (strain DSM 14266

Query: 2 IYKNLPNG 9
I+KN+P+G
Sbjct: 123 IFKNVPSG 130


>sp|EF1B_AERPE|ELONGATION factor 1-beta|Aeropyrum pernix (strain ATCC 700893

Query: 1 RIYKNLPNGY 10
RI LP+GY
Sbjct: 25 RIKSKLPSGY 34


>sp|GCS2_HALVD|GLUTAMATE--CYSTEINE ligase|Haloferax volcanii (strain ATCC 29605

Query: 1 RIYKNLPN 8
++++NLPN
Sbjct: 185 KVFENLPN 192


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 3 YKNLPNGY 10
Y +LP+GY
Sbjct: 86 YPDLPSGY 93


>sp|KHSE_AERPE|HOMOSERINE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 RIYKNLPNG 9
R+YK +P G
Sbjct: 86 RVYKGVPPG 94


>sp|GUAAA_METVS|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus vannielii

Query: 2 IYKNLPNGY 10
I+KN+PN +
Sbjct: 111 IFKNVPNEF 119


>sp|EF1B_IGNH4|ELONGATION factor 1-beta|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 IYKNLPNGY 10
I K+LP GY
Sbjct: 29 IKKSLPEGY 37


>sp|GGR_METMJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 IYKNLPNG 9
+ KN PNG
Sbjct: 244 VAKNFPNG 251


>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 IYKNLPNG 9
+ KN PNG
Sbjct: 244 VEKNFPNG 251


>sp|GATB_METJA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanocaldococcus jannaschii (strain

Query: 3 YKNLPNGY 10
Y +LP+GY
Sbjct: 92 YPDLPSGY 99


>sp|GATB_METTH|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanothermobacter thermautotrophicus

Query: 3 YKNLPNGY 10
Y +LP+GY
Sbjct: 82 YPDLPSGY 89


>sp|GATB_METM7|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C7 /

Query: 3 YKNLPNGY 10
Y +LP+GY
Sbjct: 89 YPDLPSGY 96


>sp|GATB_METVS|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus vannielii (strain ATCC

Query: 3 YKNLPNGY 10
Y +LP+GY
Sbjct: 89 YPDLPSGY 96


>sp|GATB_METS3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanobrevibacter smithii (strain

Query: 3 YKNLPNGY 10
Y +LP+GY
Sbjct: 82 YPDLPSGY 89


>sp|GATB_METMP|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain DSM

Query: 3 YKNLPNGY 10
Y +LP+GY
Sbjct: 89 YPDLPSGY 96


>sp|GATB_METM6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C6 /

Query: 3 YKNLPNGY 10
Y +LP+GY
Sbjct: 89 YPDLPSGY 96


>sp|GATB_METM5|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C5 /

Query: 3 YKNLPNGY 10
Y +LP+GY
Sbjct: 89 YPDLPSGY 96


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 3 YKNLPNGY 10
Y +LP+GY
Sbjct: 89 YPDLPSGY 96


>sp|SURE_ARCFU|5'-NUCLEOTIDASE SurE|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IYKNLPNG 9
+YK LP G
Sbjct: 159 LYKGLPEG 166


>sp|EF1B_SULAC|ELONGATION factor 1-beta|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IYKNLPNGY 10
I K LP GY
Sbjct: 25 IKKRLPEGY 33


>sp|RL34_SACI7|LARGE ribosomal subunit protein eL34|Saccharolobus islandicus (strain

Query: 1 RIYKNLPNG 9
RIY LP+G
Sbjct: 13 RIYVKLPSG 21


>sp|RL34_SACI2|LARGE ribosomal subunit protein eL34|Saccharolobus islandicus (strain

Query: 1 RIYKNLPNG 9
RIY LP+G
Sbjct: 13 RIYVKLPSG 21


>sp|RL34_SACI1|LARGE ribosomal subunit protein eL34|Saccharolobus islandicus (strain

Query: 1 RIYKNLPNG 9
RIY LP+G
Sbjct: 13 RIYVKLPSG 21


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RIYKNLPNG 9
+I KNLP G
Sbjct: 13 KIEKNLPAG 21


>sp|RL34_SACI6|LARGE ribosomal subunit protein eL34|Saccharolobus islandicus (strain

Query: 1 RIYKNLPNG 9
RIY LP+G
Sbjct: 13 RIYVKLPSG 21


>sp|RL34_SACI4|LARGE ribosomal subunit protein eL34|Saccharolobus islandicus (strain

Query: 1 RIYKNLPNG 9
RIY LP+G
Sbjct: 13 RIYVKLPSG 21


>sp|RL34_SACI3|LARGE ribosomal subunit protein eL34|Saccharolobus islandicus (strain

Query: 1 RIYKNLPNG 9
RIY LP+G
Sbjct: 13 RIYVKLPSG 21


>sp|BTUFA_HALSA|COBALAMIN-BINDING protein|Halobacterium salinarum (strain ATCC 700922

Query: 1 RIYKNLPNGY 10
R+Y +L +GY
Sbjct: 200 RVYYHLGDGY 209


>sp|BTUFA_HALS3|COBALAMIN-BINDING protein|Halobacterium salinarum (strain ATCC 29341

Query: 1 RIYKNLPNGY 10
R+Y +L +GY
Sbjct: 200 RVYYHLGDGY 209


>sp|RTCB_THEKO|TRNA-SPLICING ligase RtcB|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IYKNLPNG 9
++KN+P+G
Sbjct: 125 LFKNVPSG 132


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 2 IYKNLPNG 9
++KN+P+G
Sbjct: 559 LFKNVPSG 566


>sp|EF2_PICTO|ELONGATION factor 2|Picrophilus torridus (strain ATCC 700027

Query: 2 IYKNLPN 8
+ KNLPN
Sbjct: 252 VIKNLPN 258


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IYKNLPNG 9
++KN+P+G
Sbjct: 611 LFKNVPSG 618


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IYKNLPNG 9
++KN+P+G
Sbjct: 513 LFKNVPSG 520


>sp|PYRH_PYRAR|URIDYLATE kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 NLPNGY 10
NLP GY
Sbjct: 168 NLPGGY 173


>sp|RL34_SACS2|LARGE ribosomal subunit protein eL34|Saccharolobus solfataricus (strain

Query: 1 RIYKNLPNG 9
R+Y LP+G
Sbjct: 13 RVYVKLPSG 21


>sp|NREA_ARCFU|DNA repair protein NreA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RIYKNLPNGY 10
R Y NL GY
Sbjct: 293 RDYSNLSGGY 302


>sp|TFE_AERPE|TRANSCRIPTION factor E|Aeropyrum pernix (strain ATCC 700893

Query: 2 IYKNLPNG 9
IY+ PNG
Sbjct: 38 IYEETPNG 45


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IYKNLPNG 9
++KN+P+G
Sbjct: 612 LFKNVPSG 619


>sp|SYP_META3|PROLINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 IYKNLPNGY 10
IYK+L N Y
Sbjct: 303 IYKSLKNTY 311


>sp|RL13_THEVO|LARGE ribosomal subunit protein uL13|Thermoplasma volcanium (strain ATCC

Query: 1 RIYKNLP 7
++Y+NLP
Sbjct: 95 KVYRNLP 101


>sp|CDPAS_THEKO|CDP-ARCHAEOL synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 NLPNGY 10
NLP GY
Sbjct: 109 NLPRGY 114


>sp|RL34_METKA|LARGE ribosomal subunit protein eL34|Methanopyrus kandleri (strain AV19

Query: 1 RIYKNLPNG 9
R+YK P G
Sbjct: 13 RVYKRTPGG 21


>sp|SFSA_METS3|SUGAR fermentation stimulation protein homolog|Methanobrevibacter

Query: 2 IYKNLPNGY 10
I+KN PN +
Sbjct: 7 IFKNRPNRF 15




6|SequenceR|35|26|LGEYHRIYKN

>sp|SYP_HALSA|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LGEYHRIYKN 10
L +YHR+Y++
Sbjct: 184 LDQYHRLYED 193


>sp|SYP_HALS3|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LGEYHRIYKN 10
L +YHR+Y++
Sbjct: 184 LDQYHRLYED 193


>sp|TFE_METB6|TRANSCRIPTION factor E|Methanoregula boonei (strain DSM 21154

Query: 1 LGEYHRIYKN 10
L EYHRI N
Sbjct: 66 LAEYHRIKNN 75


>sp|DAPB_METKA|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanopyrus kandleri (strain AV19 /

Query: 1 LGEYHRI 7
LGEY RI
Sbjct: 223 LGEYERI 229


>sp|Y1652_METMP|UNCHARACTERIZED solute-binding protein MMP1652|Methanococcus maripaludis (strain

Query: 1 LGEYHRIYKN 10
GEY +Y+N
Sbjct: 38 FGEYETLYEN 47


>sp|AROK_ARCFU|SHIKIMATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GEYHRIY 8
GEY R+Y
Sbjct: 250 GEYGRVY 256


>sp|Y1674_METJA|CRISPR-ASSOCIATED protein MJ1674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YHRIYKN 10
YH+I+KN
Sbjct: 580 YHKIFKN 586


>sp|MRE11_SULAC|DNA double-strand break repair protein|Sulfolobus acidocaldarius

Query: 3 EYHRIYKN 10
E++RIYKN
Sbjct: 308 EHYRIYKN 315


>sp|MRE11_METAC|DNA double-strand break repair protein|Methanosarcina acetivorans

Query: 1 LGEYHRIYK 9
LG+YH+ K
Sbjct: 187 LGDYHKYEK 195


>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LGEYHRIYK 9
LG+Y R+Y+
Sbjct: 307 LGQYRRLYE 315


>sp|CISY_PYRFU|CITRATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LGEYHRIYKN 10
+G HR+YK
Sbjct: 259 MGAGHRVYKT 268


>sp|CAS1A_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GEYHRIYK 9
G YH YK
Sbjct: 223 GAYHETYK 230


>sp|ADEC_META3|ADENINE deaminase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GEYHRIYKN 10
G Y++++KN
Sbjct: 275 GTYNKLFKN 283




7|SequenceR|40|31|DVNYSLGEYH

>sp|COFC_METMJ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 VNYSLGEYH 10
+N++LG++H
Sbjct: 75 INWALGQFH 83


>sp|MOAC_THEVO|PROBABLE cyclic pyranopterin monophosphate synthase|Thermoplasma volcanium

Query: 1 DVNYSLGE 8
DV++SLGE
Sbjct: 78 DVDFSLGE 85


>sp|GATE_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma volcanium (strain ATCC

Query: 1 DVNYSLG 7
DVN+S+G
Sbjct: 219 DVNFSMG 225


>sp|GATE_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma acidophilum (strain ATCC

Query: 1 DVNYSLG 7
DVN+S+G
Sbjct: 216 DVNFSMG 222


>sp|AROA_METAR|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 3 NYSLGEY 9
+Y+LGEY
Sbjct: 223 DYNLGEY 229


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 DVNYSLGE 8
DV+YSL E
Sbjct: 182 DVSYSLSE 189


>sp|ANTRB_HALVD|PUTATIVE ABC transporter anion-binding protein|Haloferax volcanii (strain

Query: 1 DVNYSLG 7
DVNYSL
Sbjct: 261 DVNYSLA 267


>sp|1A1D_PYRHO|PUTATIVE 1-aminocyclopropane-1-carboxylate deaminase|Pyrococcus horikoshii

Query: 3 NYSLGEY 9
+YS GEY
Sbjct: 250 DYSFGEY 256


>sp|1A1D_PYRFU|PUTATIVE 1-aminocyclopropane-1-carboxylate deaminase|Pyrococcus furiosus

Query: 3 NYSLGEY 9
+YS GEY
Sbjct: 254 DYSFGEY 260


>sp|CDPAS_THEAC|CDP-ARCHAEOL synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 NYSLGEY 9
NY+LG Y
Sbjct: 70 NYALGTY 76


>sp|SYR_METMP|ARGININE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 VNYSLGEY 9
VNYSLG +
Sbjct: 235 VNYSLGGF 242


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DVNYSLGEYH 10
D+ YSL EY+
Sbjct: 245 DIEYSLIEYN 254


>sp|Y1725_METS5|PUTATIVE HTH-type transcriptional regulatory protein|Metallosphaera sedula

Query: 1 DVNYSLGE 8
++NYS+G+
Sbjct: 131 EMNYSMGD 138


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 1 DVNYSLGEYH 10
D++ S+G++H
Sbjct: 219 DISGSVGKFH 228


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 DVNYSLGEYH 10
D++ S+G++H
Sbjct: 219 DISGSVGKFH 228


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVNYSLGEY 9
DV Y +G+Y
Sbjct: 467 DVEYRIGDY 475


>sp|Y806_METJA|UNCHARACTERIZED peptidase MJ0806|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVNYSLGEY 9
++NY LG+Y
Sbjct: 35 NINYFLGKY 43


>sp|HIS8_METM5|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C5 /

Query: 2 VNYSLGEY 9
+ YS GEY
Sbjct: 201 IEYSKGEY 208




8|SequenceR|45|36|KQHLSDVNYS

>sp|DNAK_METBF|CHAPERONE protein DnaK|Methanosarcina barkeri (strain Fusaro /

Query: 1 KQHLSDVNYS 10
K+H+ D NY+
Sbjct: 70 KRHMGDANYT 79


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM 14266

Query: 1 KQHLSDVNY 9
+Q LSDVN+
Sbjct: 139 RQFLSDVNW 147


>sp|DNAK_HALLT|CHAPERONE protein DnaK|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 KQHLSDVNYS 10
+Q LSD +YS
Sbjct: 295 EQALSDADYS 304


>sp|DNAK_METAC|CHAPERONE protein DnaK|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KQHLSDVNY 9
K+H+ + NY
Sbjct: 70 KRHMGEANY 78


>sp|DNAK_METMZ|CHAPERONE protein DnaK|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 KQHLSDVNY 9
K+H+ + NY
Sbjct: 70 KRHMGEANY 78


>sp|DNAK_METMA|CHAPERONE protein DnaK|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KQHLSDVNY 9
K+H+ + NY
Sbjct: 70 KRHMGEANY 78


>sp|TPIS_THEVO|TRIOSEPHOSPHATE isomerase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 QHLSDVNY 9
QH+ DV Y
Sbjct: 57 QHVDDVGY 64


>sp|MFNA_METS3|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanobrevibacter smithii

Query: 1 KQHLSDV 7
KQHL+D+
Sbjct: 371 KQHLTDL 377




9|SequenceR|50|41|KARQHKQHLS

>sp|Y129_METJA|UNCHARACTERIZED protein MJ0129|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 QHKQHLS 10
+HK HLS
Sbjct: 19 EHKAHLS 25


>sp|RISC_METTM|RIBOFLAVIN synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 KARQHKQHL 9
+AR+H Q+L
Sbjct: 117 RAREHAQNL 125


>sp|RISC_METTH|RIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KARQHKQHL 9
+AR+H Q+L
Sbjct: 117 RAREHAQNL 125




10|SequenceR|55|46|HSVARKARQH

>sp|PYLB_METBF|3-METHYLORNITHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 HSVARKARQH 10
+S ARK R H
Sbjct: 44 YSAARKVRDH 53


>sp|PYLB_METAC|3-METHYLORNITHINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 VARKARQH 10
VARK R H
Sbjct: 46 VARKVRNH 53


>sp|METXA_METST|HOMOSERINE O-acetyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 HSVARKARQH 10
H V RK ++H
Sbjct: 452 HKVIRKMKEH 461




11|SequenceR|60|51|LFQDEHSVAR

>sp|COXX_AERPE|PROTOHEME IX farnesyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 FQDEHSVAR 10
F++E+SVAR
Sbjct: 195 FKEEYSVAR 203


>sp|GYAR_THEON|GLYOXYLATE reductase|Thermococcus onnurineus (strain NA1)

Query: 1 LFQDEHSVAR 10
+++DEH ++R
Sbjct: 27 VWEDEHEISR 36


>sp|TRM1_THEON|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus onnurineus

Query: 1 LFQDEHSVAR 10
F D H+VAR
Sbjct: 318 FFYDTHAVAR 327


>sp|TRM1_PYRHO|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus horikoshii

Query: 1 LFQDEHSVAR 10
LF D H++ R
Sbjct: 323 LFYDTHAIGR 332


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LFQDEHSV 8
++QDEH V
Sbjct: 165 VYQDEHPV 172


>sp|Y801_METJA|UNCHARACTERIZED ATP-binding protein MJ0801|Methanocaldococcus jannaschii (strain

Query: 1 LFQDEHSVAR 10
LF+DE+ V++
Sbjct: 329 LFKDEYEVSK 338




12|SequenceR|65|56|HFDLRLFQDE

>sp|RL6_PICTO|LARGE ribosomal subunit protein uL6|Picrophilus torridus (strain ATCC

Query: 1 HFDLRLFQD 9
HFD R+FQD
Sbjct: 161 HFDARVFQD 169


>sp|RL6_METTP|LARGE ribosomal subunit protein uL6|Methanothrix thermoacetophila (strain

Query: 2 FDLRLFQD 9
FD+R+FQD
Sbjct: 161 FDVRIFQD 168


>sp|DNAG_DESA1|DNA primase DnaG|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 FDLRLFQDE 10
FDLR+ QD+
Sbjct: 37 FDLRVLQDK 45


>sp|GYAR_KORCO|GLYOXYLATE reductase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 HFDLRLFQDE 10
HF+L L++DE
Sbjct: 22 HFELDLWKDE 31


>sp|DCD_KORCO|DCTP deaminase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 HFDLRLFQDE 10
HF +R F DE
Sbjct: 60 HFTVRRFSDE 69


>sp|RL6_METMA|LARGE ribosomal subunit protein uL6|Methanosarcina mazei (strain ATCC

Query: 2 FDLRLFQD 9
FD R+FQD
Sbjct: 161 FDPRIFQD 168


>sp|RL6_METBF|LARGE ribosomal subunit protein uL6|Methanosarcina barkeri (strain Fusaro

Query: 2 FDLRLFQD 9
FD R+FQD
Sbjct: 162 FDPRIFQD 169


>sp|RL6_METAC|LARGE ribosomal subunit protein uL6|Methanosarcina acetivorans (strain

Query: 2 FDLRLFQD 9
FD R+FQD
Sbjct: 161 FDPRIFQD 168


>sp|DNAG_STAMF|DNA primase DnaG|Staphylothermus marinus (strain ATCC 43588

Query: 1 HFDLRLFQDE 10
FDLR QD+
Sbjct: 36 QFDLRTLQDK 45


>sp|RL6_METBU|LARGE ribosomal subunit protein uL6|Methanococcoides burtonii (strain DSM

Query: 2 FDLRLFQD 9
FD R+FQD
Sbjct: 161 FDPRVFQD 168


>sp|KGSDH_SACS2|2,5-DIOXOPENTANOATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DLRLFQDE 10
D+RLF++E
Sbjct: 372 DMRLFKEE 379


>sp|Y1109_METTH|PUTATIVE nickel insertion protein|Methanothermobacter thermautotrophicus

Query: 1 HFDLRLFQDE 10
+FDL L +DE
Sbjct: 140 YFDLNLHRDE 149


>sp|DNAG_SULTO|DNA primase DnaG|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FDLRLFQDE 10
FDLR QD+
Sbjct: 36 FDLRELQDK 44


>sp|DNAG_SULAC|DNA primase DnaG|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FDLRLFQDE 10
FDLR QD+
Sbjct: 36 FDLRELQDK 44


>sp|DNAG_SACS2|DNA primase DnaG|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FDLRLFQDE 10
FDLR QD+
Sbjct: 40 FDLRELQDK 48


>sp|DNAG_SACI7|DNA primase DnaG|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 FDLRLFQDE 10
FDLR QD+
Sbjct: 36 FDLRELQDK 44


>sp|DNAG_SACI6|DNA primase DnaG|Saccharolobus islandicus (strain M.16.4 /

Query: 2 FDLRLFQDE 10
FDLR QD+
Sbjct: 36 FDLRELQDK 44


>sp|DNAG_SACI4|DNA primase DnaG|Saccharolobus islandicus (strain M.14.25 /

Query: 2 FDLRLFQDE 10
FDLR QD+
Sbjct: 36 FDLRELQDK 44


>sp|DNAG_SACI3|DNA primase DnaG|Saccharolobus islandicus (strain M.16.27)

Query: 2 FDLRLFQDE 10
FDLR QD+
Sbjct: 36 FDLRELQDK 44


>sp|DNAG_SACI2|DNA primase DnaG|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 FDLRLFQDE 10
FDLR QD+
Sbjct: 36 FDLRELQDK 44


>sp|DNAG_SACI1|DNA primase DnaG|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 FDLRLFQDE 10
FDLR QD+
Sbjct: 36 FDLRELQDK 44


>sp|DNAG_METS5|DNA primase DnaG|Metallosphaera sedula (strain ATCC 51363

Query: 2 FDLRLFQDE 10
FDLR QD+
Sbjct: 39 FDLRELQDK 47


>sp|DNAG_HYPBU|DNA primase DnaG|Hyperthermus butylicus (strain DSM 5456

Query: 2 FDLRLFQD 9
FDLR QD
Sbjct: 36 FDLRKLQD 43


>sp|GYAR_THEON|GLYOXYLATE reductase|Thermococcus onnurineus (strain NA1)

Query: 1 HFDLRLFQDE 10
HF++ +++DE
Sbjct: 22 HFEVEVWEDE 31


>sp|PUS10_PYRFU|TRNA pseudouridine synthase Pus10|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HFDLRLFQD 9
HF LRL D
Sbjct: 334 HFKLRLVTD 342


>sp|Y761_METJA|UNCHARACTERIZED metal-dependent hydrolase MJ0761|Methanocaldococcus jannaschii

Query: 1 HFDLRLFQD 9
H D+R F+D
Sbjct: 7 HLDVRSFED 15


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 2 FDLRLFQDE 10
+D+RL DE
Sbjct: 374 YDIRLLDDE 382


>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FDLRLFQD 9
FDL L++D
Sbjct: 350 FDLMLYED 357




13|SequenceR|70|61|HRGHAHFDLR

>sp|TRPB2_METMA|TRYPTOPHAN synthase beta chain 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GHAHFDL 9
GH HFD+
Sbjct: 424 GHGHFDM 430


>sp|TRPB2_METAC|TRYPTOPHAN synthase beta chain 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GHAHFDL 9
GH HFD+
Sbjct: 424 GHGHFDM 430


>sp|Y1429_THEAC|UPF0159 protein Ta1429|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 HAHFDLR 10
AHFDLR
Sbjct: 446 QAHFDLR 452


>sp|RIBL_PYRHO|FAD synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HRGHAHF 7
H GH HF
Sbjct: 19 HAGHVHF 25


>sp|RIBL_THESM|FAD synthase|Thermococcus sibiricus (strain DSM 12597

Query: 1 HRGHAHF 7
H GH HF
Sbjct: 19 HVGHIHF 25


>sp|GGR_HALVD|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Haloferax volcanii (strain ATCC 29605

Query: 1 HRGHAHFDL 9
HRG AH L
Sbjct: 264 HRGSAHIQL 272


>sp|RIBL_PYRFU|FAD synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HRGHAHF 7
H GH HF
Sbjct: 19 HVGHVHF 25


>sp|FTTA_CENSY|TRANSCRIPTION termination factor FttA|Cenarchaeum symbiosum (strain A)

Query: 3 GHAHFD 8
GHAH D
Sbjct: 249 GHAHLD 254


>sp|RIBL_PYRAB|FAD synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 HRGHAHF 7
H GH HF
Sbjct: 19 HVGHIHF 25


>sp|ARNS_SULAC|SERINE/THREONINE-PROTEIN kinase ArnS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RGHAHFDLR 10
RG+ H D++
Sbjct: 454 RGYVHLDVK 462


>sp|NCPP_PYRAR|PROBABLE inosine/xanthosine triphosphatase|Pyrobaculum arsenaticum (strain

Query: 1 HRGHAHFDL 9
H G AH D+
Sbjct: 78 HAGGAHLDI 86


>sp|SECY_ARCFU|PROTEIN translocase subunit SecY|Archaeoglobus fulgidus (strain ATCC

Query: 2 RGHAHF 7
+GH HF
Sbjct: 22 KGHVHF 27


>sp|RIBL_THEGJ|FAD synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 HRGHAHF 7
H GH HF
Sbjct: 22 HVGHVHF 28


>sp|RIBL_THEKO|FAD synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HRGHAHF 7
H GH HF
Sbjct: 20 HVGHIHF 26


>sp|ADEC_METBU|ADENINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 3 GHAHFD 8
GH HF+
Sbjct: 80 GHVHFE 85


>sp|GATD_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Halobacterium salinarum (strain ATCC

Query: 3 GHAHFDL 9
GH H DL
Sbjct: 334 GHVHSDL 340


>sp|GATD_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Halobacterium salinarum (strain ATCC

Query: 3 GHAHFDL 9
GH H DL
Sbjct: 334 GHVHSDL 340


>sp|RIBL_THEON|FAD synthase|Thermococcus onnurineus (strain NA1)

Query: 1 HRGHAHF 7
H GH HF
Sbjct: 21 HVGHIHF 27


>sp|RIBL_METEZ|FAD synthase|Methanohalobium evestigatum (strain ATCC BAA-1072

Query: 1 HRGHAHF 7
H GH H+
Sbjct: 25 HPGHLHY 31


>sp|SYP_PYRHO|PROLINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HRGHAHFDLR 10
H GH D+R
Sbjct: 94 HAGHEPLDVR 103


>sp|RIO2_ARCFU|RIO-TYPE serine/threonine-protein kinase Rio2|Archaeoglobus fulgidus (strain

Query: 1 HRGHAHFDL 9
HRG H DL
Sbjct: 211 HRGIVHGDL 219


>sp|RIBL_THEVO|FAD synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HRGHAHF 7
H GH H+
Sbjct: 14 HLGHIHY 20


>sp|HIS7_METMA|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 HAHFDLR 10
HA FDL+
Sbjct: 46 HAEFDLK 52


>sp|SYP_PYRFU|PROLINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HRGHAHFDLR 10
H GH D+R
Sbjct: 94 HAGHEPLDVR 103


>sp|HIS7_METBF|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 4 HAHFDLR 10
HA FDL+
Sbjct: 46 HAEFDLK 52




14|SequenceR|75|66|MRLNFHRGHA

>sp|CDPAS_METST|CDP-ARCHAEOL synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 RLNFHRG 8
RLNF RG
Sbjct: 123 RLNFERG 129


>sp|NADM_METTH|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanothermobacter thermautotrophicus

Query: 5 FHRGH 9
FHRGH
Sbjct: 12 FHRGH 16


>sp|GATD_HALWD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Haloquadratum walsbyi (strain DSM 16790

Query: 3 LNFHRGHA 10
++FHR HA
Sbjct: 292 VSFHRDHA 299


>sp|NADM_METVS|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 5 FHRGH 9
FH+GH
Sbjct: 12 FHKGH 16


>sp|NADM_METMP|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 5 FHRGH 9
FH+GH
Sbjct: 12 FHKGH 16


>sp|NADM_METM7|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C7 /

Query: 5 FHRGH 9
FH+GH
Sbjct: 12 FHKGH 16


>sp|NADM_METM6|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C6 /

Query: 5 FHRGH 9
FH+GH
Sbjct: 12 FHKGH 16


>sp|NADM_METM5|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C5 /

Query: 5 FHRGH 9
FH+GH
Sbjct: 12 FHKGH 16


>sp|NADM_METJA|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 5 FHRGH 9
FH+GH
Sbjct: 12 FHKGH 16


>sp|NADM_IGNH4|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 FHRGH 9
FH+GH
Sbjct: 12 FHKGH 16


>sp|Y1986_AERPE|UNCHARACTERIZED protein APE_1986.1|Aeropyrum pernix (strain ATCC 700893

Query: 5 FHRGH 9
FH+GH
Sbjct: 12 FHKGH 16


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 NFHRGHA 10
N H GHA
Sbjct: 50 NLHLGHA 56


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 4 NFHRGHA 10
N H GHA
Sbjct: 50 NLHLGHA 56


>sp|RS4E_PYRHO|SMALL ribosomal subunit protein eS4|Pyrococcus horikoshii (strain ATCC

Query: 1 MRLNFHRG 8
++LNFH G
Sbjct: 138 VQLNFHDG 145


>sp|COAD_METBF|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 5 FHRGHA 10
FH GHA
Sbjct: 13 FHDGHA 18


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 NFHRGHA 10
+FH GHA
Sbjct: 48 SFHIGHA 54


>sp|RS4E_PYRAB|SMALL ribosomal subunit protein eS4|Pyrococcus abyssi (strain GE5 /

Query: 1 MRLNFHRG 8
++LNFH G
Sbjct: 138 IQLNFHDG 145


>sp|RS4E_PYRFU|SMALL ribosomal subunit protein eS4|Pyrococcus furiosus (strain ATCC

Query: 1 MRLNFHRG 8
++LNFH G
Sbjct: 138 VQLNFHDG 145


>sp|NADM_THEAC|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 FHRGH 9
FH+GH
Sbjct: 18 FHKGH 22


>sp|SYC_THEVO|CYSTEINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 NFHRGHA 10
+FH GHA
Sbjct: 34 HFHIGHA 40


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 NFHRGHA 10
+FH GHA
Sbjct: 34 HFHIGHA 40


>sp|COAD_METTH|PHOSPHOPANTETHEINE adenylyltransferase|Methanothermobacter thermautotrophicus

Query: 5 FHRGH 9
FH+GH
Sbjct: 17 FHKGH 21




15|SequenceR|80|71|STDRKMRLNF

>sp|Y1556_METJA|UNCHARACTERIZED protein MJ1556|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 STDRKMRLN 9
+TD+K++LN
Sbjct: 157 NTDKKIKLN 165


>sp|PGP_METMJ|PHOSPHOGLYCOLATE phosphatase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 TDRKMRLN 9
TDR+ R+N
Sbjct: 14 TDRRRRIN 21




16|SequenceR|85|76|EDSFLSTDRK

>sp|WTPB_PYRFU|MOLYBDATE/TUNGSTATE transport system permease protein|Pyrococcus furiosus (strain ATCC

Query: 2 DSFLSTDRK 10
D FLS D K
Sbjct: 141 DGFLSVDEK 149


>sp|PCKG_SULAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EDSFLSTDRK 10
ED+F+ TD K
Sbjct: 90 EDTFILTDEK 99


>sp|AATB_METS5|A-TYPE ATP synthase subunit B|Metallosphaera sedula (strain ATCC 51363

Query: 1 EDSFLSTDRK 10
EDS TD+K
Sbjct: 396 EDSLSDTDKK 405


>sp|TYSY_METTM|PUTATIVE thymidylate synthase|Methanothermobacter marburgensis (strain

Query: 2 DSFLSTDRK 10
+ FLS DRK
Sbjct: 85 EQFLSDDRK 93


>sp|PINA_SULAC|HOLLIDAY junction branch migration ATPase|Sulfolobus acidocaldarius (strain

Query: 1 EDSFLSTDRK 10
+DSF+ +RK
Sbjct: 188 KDSFIEIERK 197


>sp|TYSY_METTH|PUTATIVE thymidylate synthase|Methanothermobacter thermautotrophicus

Query: 2 DSFLSTDRK 10
+ FLS DRK
Sbjct: 85 EQFLSGDRK 93




17|SequenceR|90|81|TEVKFEDSFL

>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 EVKFEDSF 9
EV+F+DSF
Sbjct: 153 EVEFDDSF 160


>sp|RL14_NATPD|LARGE ribosomal subunit protein uL14|Natronomonas pharaonis (strain

Query: 1 TEVKFEDS 8
T VKFED+
Sbjct: 86 TRVKFEDN 93


>sp|RL14_METVS|LARGE ribosomal subunit protein uL14|Methanococcus vannielii (strain

Query: 1 TEVKFEDS 8
T VKFED+
Sbjct: 86 TRVKFEDN 93


>sp|RL14_METVA|LARGE ribosomal subunit protein uL14|Methanococcus vannielii

Query: 1 TEVKFEDS 8
T VKFED+
Sbjct: 86 TRVKFEDN 93


>sp|RL14_METMP|LARGE ribosomal subunit protein uL14|Methanococcus maripaludis (strain

Query: 1 TEVKFEDS 8
T VKFED+
Sbjct: 86 TRVKFEDN 93


>sp|RL14_METM7|LARGE ribosomal subunit protein uL14|Methanococcus maripaludis (strain

Query: 1 TEVKFEDS 8
T VKFED+
Sbjct: 86 TRVKFEDN 93


>sp|RL14_METM6|LARGE ribosomal subunit protein uL14|Methanococcus maripaludis (strain

Query: 1 TEVKFEDS 8
T VKFED+
Sbjct: 86 TRVKFEDN 93


>sp|RL14_METM5|LARGE ribosomal subunit protein uL14|Methanococcus maripaludis (strain

Query: 1 TEVKFEDS 8
T VKFED+
Sbjct: 86 TRVKFEDN 93


>sp|RL14_METKA|LARGE ribosomal subunit protein uL14|Methanopyrus kandleri (strain AV19

Query: 1 TEVKFEDS 8
T VKFED+
Sbjct: 87 TRVKFEDN 94


>sp|RL14_HALWD|LARGE ribosomal subunit protein uL14|Haloquadratum walsbyi (strain DSM

Query: 1 TEVKFEDS 8
T VKFED+
Sbjct: 86 TRVKFEDN 93


>sp|RL14_HALSA|LARGE ribosomal subunit protein uL14|Halobacterium salinarum (strain

Query: 1 TEVKFEDS 8
T VKFED+
Sbjct: 86 TRVKFEDN 93


>sp|RL14_HALS3|LARGE ribosomal subunit protein uL14|Halobacterium salinarum (strain

Query: 1 TEVKFEDS 8
T VKFED+
Sbjct: 86 TRVKFEDN 93


>sp|RL14_HALMA|LARGE ribosomal subunit protein uL14|Haloarcula marismortui (strain

Query: 1 TEVKFEDS 8
T VKFED+
Sbjct: 86 TRVKFEDN 93


>sp|RL14_HALLT|LARGE ribosomal subunit protein uL14|Halorubrum lacusprofundi (strain

Query: 1 TEVKFEDS 8
T VKFED+
Sbjct: 86 TRVKFEDN 93


>sp|RL14_ARCFU|LARGE ribosomal subunit protein uL14|Archaeoglobus fulgidus (strain

Query: 1 TEVKFEDS 8
T VKFED+
Sbjct: 86 TRVKFEDN 93


>sp|RL14_NANEQ|LARGE ribosomal subunit protein uL14|Nanoarchaeum equitans (strain

Query: 1 TEVKFEDS 8
T +KFED+
Sbjct: 86 TRIKFEDN 93


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 2 EVKFEDSF 9
EV+F+D+F
Sbjct: 153 EVEFDDNF 160


>sp|Y1050_PYRFU|UPF0127 protein PF1050|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EVKFEDSFL 10
EV+F D+F+
Sbjct: 13 EVRFADNFI 21


>sp|SPEE_PYRAE|POLYAMINE aminopropyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TEVKFEDSFL 10
+EV+ ED F+
Sbjct: 137 SEVRIEDGFV 146


>sp|RNH2_METJA|RIBONUCLEASE HII|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KFEDSF 9
KFEDSF
Sbjct: 120 KFEDSF 125




18|SequenceR|95|86|LVKNSTEVKF

>sp|Y1762_ARCFU|UNCHARACTERIZED protein AF_1762|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KNSTEVKF 10
+NSTE+KF
Sbjct: 48 RNSTEIKF 55




19|SequenceR|100|91|STDYDLVKNS

>sp|AROC_METAC|CHORISMATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 STDYDLVKNS 10
S+ YD++KN+
Sbjct: 92 SSSYDVIKNT 101


>sp|TRPD_PICTO|ANTHRANILATE phosphoribosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 TDYDLVKN 9
T+YD++KN
Sbjct: 128 TEYDIIKN 135


>sp|AROC_METMA|CHORISMATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 STDYDLVKNS 10
S+ YD +KN+
Sbjct: 92 SSSYDAIKNT 101


>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 3 DYDLVKNS 10
+YD++KN+
Sbjct: 159 EYDVIKNT 166


>sp|Y115_METJA|UNCHARACTERIZED protein MJ0115|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DYDLVKNS 10
DY+L KN+
Sbjct: 83 DYELAKNN 90


>sp|SYFB_METS5|PHENYLALANINE--TRNA ligase beta subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 STDYDLVKNS 10
S +YD V+NS
Sbjct: 398 SVEYDSVRNS 407


>sp|RL30_METMA|LARGE ribosomal subunit protein uL30|Methanosarcina mazei (strain ATCC

Query: 1 STDYDLVK 8
+TDYD +K
Sbjct: 86 NTDYDSIK 93


>sp|ADEC_META3|ADENINE deaminase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 TDYDLVKNS 10
TD+ L+KN+
Sbjct: 580 TDFGLIKNN 588


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TDYDLVK 8
T YDLVK
Sbjct: 203 TTYDLVK 209


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 1 STDYDL 6
STDYD+
Sbjct: 592 STDYDI 597


>sp|TBP3_METAC|TATA-BOX-BINDING protein 3|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 STDYDLVK 8
+T++DLVK
Sbjct: 17 ATEFDLVK 24




20|SequenceR|105|96|GTYIHSTDYD

>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 YIHSTDYD 10
YIH+ DYD
Sbjct: 108 YIHACDYD 115


>sp|PYRE_METHJ|OROTATE phosphoribosyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 5 HSTDYD 10
HSTD+D
Sbjct: 55 HSTDFD 60


>sp|Y2179_THEKO|UNCHARACTERIZED protein TK2179|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GTYIHSTDYD 10
G+Y+++ D+D
Sbjct: 19 GSYLYNGDFD 28


>sp|Y3946_HALS3|PUTATIVE HTH-type transcriptional regulatory protein|Halobacterium

Query: 1 GTYIHST 7
GTY+H+T
Sbjct: 66 GTYLHAT 72


>sp|Y2112_HALSA|PUTATIVE HTH-type transcriptional regulatory protein|Halobacterium

Query: 1 GTYIHST 7
GTY+H+T
Sbjct: 66 GTYLHAT 72


>sp|DHYS_METKA|PROBABLE deoxyhypusine synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 YIHSTDYD 10
+IHS D+D
Sbjct: 183 WIHSQDHD 190


>sp|PYCA_METTH|PYRUVATE carboxylase subunit A|Methanothermobacter thermautotrophicus

Query: 1 GTYIHS 6
GTY+HS
Sbjct: 483 GTYMHS 488


>sp|SYP_CALMQ|PROLINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 YIHSTDY 9
YIH+T Y
Sbjct: 255 YIHTTSY 261


>sp|TRM56_SACS2|TRNA (cytidine(56)-2'-O)-methyltransferase|Saccharolobus solfataricus

Query: 1 GTYIHSTDYD 10
G Y H+ DY+
Sbjct: 100 GWYYHNADYN 109


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 1 GTYIHSTDYD 10
GTY ++ D+D
Sbjct: 618 GTYEYTDDFD 627


>sp|COFC_METMP|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 3 YIHSTD 8
YIH TD
Sbjct: 188 YIHGTD 193


>sp|COFC_METM7|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain C7 /

Query: 3 YIHSTD 8
YIH TD
Sbjct: 188 YIHGTD 193


>sp|COFC_METM6|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain C6 /

Query: 3 YIHSTD 8
YIH TD
Sbjct: 188 YIHGTD 193


>sp|COFC_METM5|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain C5 /

Query: 3 YIHSTD 8
YIH TD
Sbjct: 188 YIHGTD 193


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 YIHSTDYD 10
Y+++ DYD
Sbjct: 98 YVNACDYD 105


>sp|FEN_METPE|FLAP endonuclease 1|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 TYIHSTDYD 10
TY S DYD
Sbjct: 168 TYAVSQDYD 176


>sp|FEN_METMJ|FLAP endonuclease 1|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 TYIHSTDYD 10
TY S DYD
Sbjct: 168 TYAVSQDYD 176


>sp|FEN_METLZ|FLAP endonuclease 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 TYIHSTDYD 10
TY S DYD
Sbjct: 168 TYAVSQDYD 176


>sp|TRM56_METS5|TRNA (cytidine(56)-2'-O)-methyltransferase|Metallosphaera sedula

Query: 1 GTYIHSTD 8
G YIH D
Sbjct: 29 GIYIHGND 36


>sp|Y1942_ARCFU|UNCHARACTERIZED protein AF_1942|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GTYIHSTDYD 10
G Y+H+ D D
Sbjct: 60 GVYLHTNDGD 69


>sp|IF2A_PYRAE|TRANSLATION initiation factor 2 subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 GTYIHSTDYD 10
G Y++ +YD
Sbjct: 26 GAYVYLDEYD 35




21|SequenceR|110|101|EGYIHGTYIH

>sp|COBQ_METVS|PROBABLE cobyric acid synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 YIHGTYIH 10
YI GTY+H
Sbjct: 429 YIFGTYLH 436


>sp|COBQ_METMP|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EGYIHGTYIH 10
+ YI GTY H
Sbjct: 427 DSYIFGTYFH 436


>sp|COBQ_METMA|PROBABLE cobyric acid synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EGYIHGTYIH 10
+G++ GTY+H
Sbjct: 418 DGFVIGTYLH 427


>sp|COBQ_METM6|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C6 /

Query: 1 EGYIHGTYIH 10
+ YI GTY H
Sbjct: 427 DSYIFGTYFH 436


>sp|COBQ_METM7|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C7 /

Query: 3 YIHGTYIH 10
YI GTY H
Sbjct: 429 YIFGTYFH 436


>sp|COBQ_METM5|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C5 /

Query: 3 YIHGTYIH 10
YI GTY H
Sbjct: 429 YIFGTYFH 436


>sp|AROC_METTH|CHORISMATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GYIHGTYI 9
G+IH TYI
Sbjct: 364 GFIHPTYI 371


>sp|PCP_THEON|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus onnurineus (strain NA1)

Query: 2 GYIHGTYIH 10
G+IH +IH
Sbjct: 162 GFIHVPFIH 170


>sp|RKD4_PYRCJ|ARCADIN-4 calidifontis (strain DSM 21063

Query: 1 EGYIHGT 7
EG+I+GT
Sbjct: 141 EGFIYGT 147


>sp|PUR8_PYRHO|ADENYLOSUCCINATE lyase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 HGTYIH 10
HG Y+H
Sbjct: 92 HGKYVH 97


>sp|PUR8_PYRAB|ADENYLOSUCCINATE lyase|Pyrococcus abyssi (strain GE5 /

Query: 5 HGTYIH 10
HG Y+H
Sbjct: 92 HGKYVH 97


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 2 GYIHGTY 8
GY H TY
Sbjct: 765 GYTHDTY 771


>sp|Y1317_ARCFU|UNCHARACTERIZED protein AF_1317|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GYIHGTY 8
YIHG Y
Sbjct: 44 AYIHGFY 50


>sp|TRUD_METM5|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain

Query: 5 HGTYIH 10
HG++IH
Sbjct: 53 HGSFIH 58


>sp|TRUD2_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain

Query: 5 HGTYIH 10
HG++IH
Sbjct: 53 HGSFIH 58


>sp|PUS10_PICTO|TRNA pseudouridine synthase Pus10|Picrophilus torridus (strain ATCC

Query: 3 YIHGTYI 9
YI+G YI
Sbjct: 155 YIYGVYI 161


>sp|Y090_METJA|UNCHARACTERIZED protease MJ0090|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGYIHG 6
EG++HG
Sbjct: 164 EGFVHG 169


>sp|COFD_METTH|2-PHOSPHO-L-LACTATE transferase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 GYIHGTYI 9
GY+ G Y+
Sbjct: 42 GYLSGVYV 49


>sp|GPGS_METBU|GLUCOSYL-3-PHOSPHOGLYCERATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EGYIHGTYI 9
E Y+HG ++
Sbjct: 308 ESYLHGIHV 316


>sp|Y1398_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1398|Methanocaldococcus

Query: 3 YIHGTYIH 10
+++G Y+H
Sbjct: 18 HVYGIYVH 25




22|SequenceR|115|106|SFSGEEGYIH

>sp|NTPTH_AERPE|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Aeropyrum pernix (strain ATCC 700893

Query: 3 SGEEGYI 9
SGEEGY+
Sbjct: 72 SGEEGYL 78


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 3 SGEEGYIH 10
SGE G+IH
Sbjct: 382 SGEHGWIH 389


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 3 SGEEGYIH 10
SGE G+IH
Sbjct: 378 SGEHGWIH 385


>sp|IF2A_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC

Query: 2 FSGEEGYIH 10
+ G+EG++H
Sbjct: 34 YPGKEGFMH 42


>sp|RIFK_PYRAB|RIBOFLAVIN kinase|Pyrococcus abyssi (strain GE5 /

Query: 5 EEGYIH 10
E+GYIH
Sbjct: 49 EQGYIH 54


>sp|IF2A_THEGJ|TRANSLATION initiation factor 2 subunit|Thermococcus gammatolerans (strain

Query: 2 FSGEEGYIH 10
+ G+EG++H
Sbjct: 34 YPGKEGFMH 42


>sp|DNLI_METPE|DNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 GEEGYIH 10
GEEG IH
Sbjct: 206 GEEGLIH 212


>sp|SYP_CENSY|PROLINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 SFSGEEG 7
S+SGEEG
Sbjct: 296 SYSGEEG 302


>sp|TRM56_SULAC|TRNA (cytidine(56)-2'-O)-methyltransferase|Sulfolobus acidocaldarius

Query: 2 FSGEEGYIH 10
+ GEE YIH
Sbjct: 102 YKGEELYIH 110


>sp|PYRB_SULTO|ASPARTATE carbamoyltransferase catalytic subunit|Sulfurisphaera tokodaii

Query: 2 FSGEEG 7
FSGEEG
Sbjct: 69 FSGEEG 74


>sp|IF2A_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 2 FSGEEGYIH 10
+ G+EG++H
Sbjct: 34 YPGKEGFMH 42


>sp|NADB_HALSA|L-ASPARTATE oxidase|Halobacterium salinarum (strain ATCC 700922

Query: 2 FSGEEGY 8
F GEEG+
Sbjct: 103 FDGEEGF 109


>sp|RLME_METVS|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus vannielii

Query: 3 SGEEGYI 9
+GEEG+I
Sbjct: 68 TGEEGFI 74


>sp|IF2A_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain

Query: 2 FSGEEGYIH 10
+ G+EG++H
Sbjct: 34 YPGKEGFMH 42


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 4 GEEGYI 9
GEEGYI
Sbjct: 332 GEEGYI 337


>sp|NASB_HALMT|PROBABLE nitrate transporter|Haloferax mediterranei (strain ATCC 33500

Query: 1 SFSGEEGYIH 10
SF+ EG IH
Sbjct: 381 SFAAAEGMIH 390


>sp|RL24_HALMA|LARGE ribosomal subunit protein uL24|Haloarcula marismortui (strain

Query: 2 FSGEEGYI 9
F+GEEG +
Sbjct: 56 FAGEEGEV 63


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 FSGEEGYIH 10
+ GE G IH
Sbjct: 262 YDGERGQIH 270


>sp|HMGCS_THEON|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus onnurineus (strain NA1)

Query: 2 FSGEEGYIH 10
F+GE Y H
Sbjct: 205 FTGEPAYFH 213


>sp|HMGCS_PYRAB|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 FSGEEGYIH 10
F+GE Y H
Sbjct: 205 FTGEPAYFH 213


>sp|ARGJ_METKA|GLUTAMATE N-acetyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 SFSGEEGY 8
+ +GEEGY
Sbjct: 68 AMTGEEGY 75


>sp|HMGCS_SACI6|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 FSGEEGYIH 10
F+GE Y H
Sbjct: 203 FTGEPAYFH 211


>sp|HMGCS_SACI4|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 FSGEEGYIH 10
F+GE Y H
Sbjct: 203 FTGEPAYFH 211


>sp|HMGCS_SACI3|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 FSGEEGYIH 10
F+GE Y H
Sbjct: 203 FTGEPAYFH 211


>sp|HMGCS_PYRHO|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FSGEEGYIH 10
F+GE Y H
Sbjct: 205 FTGEPAYFH 213


>sp|HMGCS_THEKO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FSGEEGYIH 10
F+GE Y H
Sbjct: 205 FTGEPAYFH 213


>sp|HMGCS_SACI7|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 FSGEEGYIH 10
F+GE Y H
Sbjct: 203 FTGEPAYFH 211


>sp|HMGCS_SACI2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 FSGEEGYIH 10
F+GE Y H
Sbjct: 203 FTGEPAYFH 211


>sp|HMGCS_SACI1|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 FSGEEGYIH 10
F+GE Y H
Sbjct: 203 FTGEPAYFH 211


>sp|HMGCS_PYRFU|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FSGEEGYIH 10
F+GE Y H
Sbjct: 205 FTGEPAYFH 213


>sp|PGK_PYRAE|PHOSPHOGLYCERATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 FSGEEGYI 9
FSG GYI
Sbjct: 326 FSGPMGYI 333


>sp|HMGCS_SACS2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FSGEEGYIH 10
F+GE Y H
Sbjct: 203 FTGEPAYFH 211


>sp|HMGCS_THESM|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus sibiricus (strain DSM 12597

Query: 2 FSGEEGYIH 10
F+GE Y H
Sbjct: 205 FTGEPAYFH 213


>sp|HMGCS_THEGJ|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 FSGEEGYIH 10
F+GE Y H
Sbjct: 205 FTGEPAYFH 213


>sp|HMGCS_AERPE|HYDROXYMETHYLGLUTARYL-COA synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 FSGEEGYIH 10
F+GE Y H
Sbjct: 213 FTGEPAYFH 221


>sp|ACAR_SULTO|ACRYLOYL-COENZYME A reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GEEGYIH 10
GEE Y H
Sbjct: 99 GEEAYCH 105


>sp|IF2A_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 2 FSGEEGYIH 10
+ G+EG IH
Sbjct: 34 YPGKEGMIH 42


>sp|HMGCS_METBU|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 FSGEEGY 8
F+GE GY
Sbjct: 203 FTGEPGY 209


>sp|PRIS_NITMS|DNA primase small subunit PriS|Nitrosopumilus maritimus (strain SCM1)

Query: 2 FSGEEGY 8
FSG EG+
Sbjct: 175 FSGNEGF 181


>sp|HMGCS_METMA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FSGEEGY 8
F+GE GY
Sbjct: 203 FTGEPGY 209


>sp|HMGCS_METBF|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 FSGEEGY 8
F+GE GY
Sbjct: 203 FTGEPGY 209




23|SequenceR|120|111|IVSGHSFSGE

>sp|FOLCP_HALVD|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 2 VSGHSFSGE 10
VSGH F GE
Sbjct: 491 VSGHEFGGE 499


>sp|RL4_METTP|LARGE ribosomal subunit protein uL4|Methanothrix thermoacetophila (strain

Query: 4 GHSFSGE 10
GH FSGE
Sbjct: 130 GHLFSGE 136


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VSGHSFSGE 10
V+GHS+ G+
Sbjct: 329 VAGHSYRGD 337


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 VSGHSFSG 9
VSG SFSG
Sbjct: 65 VSGGSFSG 72


>sp|AROD_HALSA|3-DEHYDROQUINATE dehydratase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IVSGHSFSG 9
+VS H F G
Sbjct: 116 VVSAHDFDG 124


>sp|AROD_HALS3|3-DEHYDROQUINATE dehydratase|Halobacterium salinarum (strain ATCC 29341

Query: 1 IVSGHSFSG 9
+VS H F G
Sbjct: 116 VVSAHDFDG 124


>sp|HUTH_THEVO|PROBABLE histidine ammonia-lyase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IVSGHSFSGE 10
+VSG +F GE
Sbjct: 318 VVSGGNFHGE 327


>sp|AROD_METBF|3-DEHYDROQUINATE dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IVSGHSFS 8
IVS H FS
Sbjct: 131 IVSSHDFS 138


>sp|HUTH_THEAC|PROBABLE histidine ammonia-lyase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IVSGHSFSGE 10
+VSG +F GE
Sbjct: 318 VVSGGNFHGE 327


>sp|PYRK_PYRFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus furiosus

Query: 4 GHSFSGE 10
GH FSG+
Sbjct: 82 GHGFSGK 88


>sp|HUTH_HALSA|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IVSGHSFSGE 10
+VSG +F GE
Sbjct: 336 VVSGGNFHGE 345


>sp|HUTH_HALS3|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 29341

Query: 1 IVSGHSFSGE 10
+VSG +F GE
Sbjct: 336 VVSGGNFHGE 345


>sp|IPK_METTH|ISOPENTENYL phosphate kinase|Methanothermobacter thermautotrophicus (strain

Query: 4 GHSFSGE 10
GH F+GE
Sbjct: 51 GHPFAGE 57


>sp|ISCS_METTE|CYSTEINE desulfurase IscS|Methanosarcina thermophila

Query: 2 VSGHSFSG 9
+SGH F G
Sbjct: 212 LSGHEFEG 219




24|SequenceR|125|116|EFRGDIVSGH

>sp|Y1496_PYRFU|UPF0252 protein PF1496|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FRGDIVSGH 10
F+GDI GH
Sbjct: 243 FKGDITGGH 251


>sp|PURL_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EFRGDIVS 8
EFRG+IV+
Sbjct: 340 EFRGEIVA 347


>sp|RIFK_SACS2|RIBOFLAVIN kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EFRGDIVSG 9
E +G+IVSG
Sbjct: 46 EIKGNIVSG 54


>sp|AROK_METAR|SHIKIMATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 EFRGDIVSG 9
E RGD++ G
Sbjct: 36 ELRGDLIEG 44


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 DIVSGH 10
D+VSGH
Sbjct: 120 DVVSGH 125


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 EFRGDIVS 8
+F GDI+S
Sbjct: 637 DFNGDIIS 644


>sp|TRUA_PYRIL|TRNA pseudouridine synthase A|Pyrobaculum islandicum (strain DSM 4184

Query: 1 EFRGDIVSGH 10
E RGD++ H
Sbjct: 144 ELRGDLIYMH 153


>sp|RNJ_METJA|RIBONUCLEASE J|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FRGDIVSGH 10
F+G VSGH
Sbjct: 379 FKGAHVSGH 387




25|SequenceR|130|121|TQIFGEFRGD

>sp|TYW2_METJA|TRNA(PHE) (4-demethylwyosine(37)-C(7))

Query: 1 TQIFGEFR 8
TQI GEFR
Sbjct: 40 TQITGEFR 47


>sp|Y3407_METJA|UNCHARACTERIZED protein MJECS07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FGEFRGD 10
FGE RGD
Sbjct: 268 FGEIRGD 274


>sp|PCNA_THEVO|DNA polymerase sliding clamp|Thermoplasma volcanium (strain ATCC

Query: 2 QIFGEFRGD 10
++F EFR D
Sbjct: 54 EVFSEFRSD 62


>sp|Y1344_METBU|PROTEIN Mbur_1344|Methanococcoides burtonii (strain DSM 6242

Query: 2 QIFGEFRG 9
++FGE RG
Sbjct: 35 EVFGELRG 42


>sp|RADA_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain ATCC

Query: 1 TQIFGEF 7
T++FGEF
Sbjct: 142 TEVFGEF 148


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 1 TQIFGEF 7
T++FGEF
Sbjct: 139 TEVFGEF 145


>sp|NREB_ARCFU|DNA repair protein NreB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TQIFGEFRGD 10
+ I G+FR D
Sbjct: 87 SMILGQFRAD 96


>sp|RADA_PYRAB|DNA repair and recombination protein|Pyrococcus abyssi (strain GE5 /

Query: 1 TQIFGEF 7
T++FGEF
Sbjct: 138 TEVFGEF 144


>sp|Y866_ARCFU|UNCHARACTERIZED sugar kinase AF_0866|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QIFGEFR 8
+IFGE+R
Sbjct: 233 RIFGEYR 239


>sp|ADEC_METMJ|ADENINE deaminase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 FGEFRG 9
FGE+RG
Sbjct: 13 FGEYRG 18


>sp|Y2121_ARCFU|UNCHARACTERIZED protein AF_2121|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TQIFGEFRGD 10
T IFG+ GD
Sbjct: 99 TYIFGDVSGD 108


>sp|DGGGP_METMJ|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 IFGEFRG 9
+FG FRG
Sbjct: 238 LFGAFRG 244


>sp|PDXT_IGNH4|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Ignicoccus hospitalis (strain

Query: 2 QIFGEFRGD 10
++ GEF+G+
Sbjct: 156 EVLGEFKGN 164


>sp|BACH_HALSD|HALORHODOPSIN sodomense

Query: 1 TQIFGEFRGD 10
TQIF +GD
Sbjct: 21 TQIFEAIQGD 30


>sp|RADA_PYRFU|DNA repair and recombination protein|Pyrococcus furiosus (strain ATCC

Query: 1 TQIFGEF 7
T++FGEF
Sbjct: 134 TEVFGEF 140


>sp|RADA_CENSY|DNA repair and recombination protein|Cenarchaeum symbiosum (strain A)

Query: 1 TQIFGEF 7
T++FGEF
Sbjct: 110 TEVFGEF 116


>sp|RADA_METTH|DNA repair and recombination protein|Methanothermobacter

Query: 1 TQIFGEF 7
T++FGEF
Sbjct: 100 TEVFGEF 106


>sp|RADA_METS3|DNA repair and recombination protein|Methanobrevibacter smithii (strain

Query: 1 TQIFGEF 7
T++FGEF
Sbjct: 100 TEVFGEF 106


>sp|METXA_NATPD|HOMOSERINE O-acetyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 QIFGEFRGD 10
+ +GEF GD
Sbjct: 28 ETYGEFTGD 36


>sp|DPCKG_THEPD|GTP-DEPENDENT dephospho-CoA kinase|Thermofilum pendens (strain DSM 2475

Query: 3 IFGEFRG 9
I+G FRG
Sbjct: 143 IYGNFRG 149


>sp|UVRB_NATPD|UVRABC system protein B|Natronomonas pharaonis (strain ATCC 35678

Query: 2 QIFGEFRGD 10
QI G+F GD
Sbjct: 358 QIKGQFEGD 366


>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 2 QIFGEFRGD 10
QI G+F GD
Sbjct: 359 QIRGQFEGD 367


>sp|RISB_THEON|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Thermococcus onnurineus (strain NA1)

Query: 5 GEFRGD 10
GEF+GD
Sbjct: 8 GEFKGD 13


>sp|RADB_METBU|DNA repair and recombination protein|Methanococcoides burtonii

Query: 1 TQIFGE 6
TQIFGE
Sbjct: 29 TQIFGE 34




26|SequenceR|135|126|FTGGRTQIFG

>sp|KAE1_CALMQ|TRNA N6-adenosine threonylcarbamoyltransferase|Caldivirga maquilingensis

Query: 1 FTGGRTQIFG 10
++GGR ++FG
Sbjct: 140 YSGGRYRVFG 149


>sp|KAE1B_METBF|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 FTGGRTQIFG 10
+ GGR ++FG
Sbjct: 145 YMGGRYRVFG 154


>sp|PURL_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FTGGRTQI 8
+TGGRT I
Sbjct: 449 YTGGRTAI 456


>sp|AOCD_METKA|ORNITHINE cyclodeaminase|Methanopyrus kandleri (strain AV19 /

Query: 4 GRTQIFG 10
GRT IFG
Sbjct: 166 GRTGIFG 172


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 FTGGRTQIF 9
F GGR +F
Sbjct: 976 FEGGRVYVF 984


>sp|MNTP_METB6|MANGANESE exporter MntP|Methanoregula boonei (strain DSM 21154

Query: 3 GGRTQIFG 10
G RT+IFG
Sbjct: 160 GNRTEIFG 167


>sp|KAE1_PYRFU|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus furiosus

Query: 3 GGRTQIFG 10
GGR ++FG
Sbjct: 140 GGRYRVFG 147


>sp|AROA_METST|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 1 FTGGRTQIFG 10
F GG+T I G
Sbjct: 155 FEGGQTDIKG 164


>sp|RS4E_HALSA|SMALL ribosomal subunit protein eS4|Halobacterium salinarum (strain ATCC

Query: 2 TGGRTQI 8
+GGRTQ+
Sbjct: 128 SGGRTQL 134


>sp|RS4E_HALS3|SMALL ribosomal subunit protein eS4|Halobacterium salinarum (strain ATCC

Query: 2 TGGRTQI 8
+GGRTQ+
Sbjct: 128 SGGRTQL 134


>sp|KAE1_PYRAB|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus abyssi (strain

Query: 3 GGRTQIFG 10
GGR ++FG
Sbjct: 140 GGRYRVFG 147


>sp|KAE1_PYRHO|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus horikoshii

Query: 3 GGRTQIFG 10
GGR ++FG
Sbjct: 140 GGRYRVFG 147


>sp|KAE1_THESM|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus sibiricus

Query: 3 GGRTQIFG 10
GGR ++FG
Sbjct: 140 GGRYRVFG 147


>sp|KAE1_THEON|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus onnurineus

Query: 3 GGRTQIFG 10
GGR ++FG
Sbjct: 140 GGRYRVFG 147


>sp|KAE1_THEKO|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus kodakarensis

Query: 3 GGRTQIFG 10
GGR ++FG
Sbjct: 140 GGRYRVFG 147


>sp|KAE1_THEGJ|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus

Query: 3 GGRTQIFG 10
GGR ++FG
Sbjct: 140 GGRYRVFG 147




27|SequenceR|140|131|APEVYFTGGR

>sp|PRIS_SACI7|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 PEVYFTGGR 10
P+VYF+G R
Sbjct: 168 PKVYFSGNR 176


>sp|PRIS_SACI2|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 PEVYFTGGR 10
P+VYF+G R
Sbjct: 168 PKVYFSGNR 176


>sp|PRIS_SACI1|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 PEVYFTGGR 10
P+VYF+G R
Sbjct: 168 PKVYFSGNR 176


>sp|PRIS_SACS2|DNA primase small subunit PriS|Saccharolobus solfataricus (strain ATCC

Query: 2 PEVYFTGGR 10
P+VYF+G R
Sbjct: 168 PKVYFSGNR 176


>sp|PRIS_SACI4|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.14.25

Query: 2 PEVYFTGGR 10
P+VYF+G R
Sbjct: 168 PKVYFSGNR 176


>sp|PRIS_SACI3|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 PEVYFTGGR 10
P+VYF+G R
Sbjct: 168 PKVYFSGNR 176


>sp|PRIS_SACI6|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.16.4

Query: 2 PEVYFTGGR 10
P+VYF+G R
Sbjct: 168 PKVYFSGNR 176


>sp|PRIS_ARCFU|DNA primase small subunit PriS|Archaeoglobus fulgidus (strain ATCC

Query: 3 EVYFTGGR 10
++YF+GGR
Sbjct: 137 KIYFSGGR 144


>sp|PRIS_PICTO|DNA primase small subunit PriS|Picrophilus torridus (strain ATCC 700027

Query: 3 EVYFTGGR 10
++YF+GGR
Sbjct: 136 KLYFSGGR 143


>sp|HIS6_METVS|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus vannielii (strain

Query: 3 EVYFTGGR 10
EVY GGR
Sbjct: 160 EVYIYGGR 167


>sp|HIS6_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 3 EVYFTGGR 10
EVY GGR
Sbjct: 160 EVYIYGGR 167


>sp|HIS6_METM7|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 3 EVYFTGGR 10
EVY GGR
Sbjct: 160 EVYIYGGR 167


>sp|HIS6_METM6|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 3 EVYFTGGR 10
EVY GGR
Sbjct: 160 EVYIYGGR 167


>sp|HIS6_METM5|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 3 EVYFTGGR 10
EVY GGR
Sbjct: 160 EVYIYGGR 167


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 PEVYFT 7
PEVY+T
Sbjct: 480 PEVYYT 485


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PEVYFT 7
PEVY+T
Sbjct: 480 PEVYYT 485


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 PEVYFT 7
PEVY+T
Sbjct: 480 PEVYYT 485


>sp|PRIS_SULAC|DNA primase small subunit PriS|Sulfolobus acidocaldarius (strain ATCC

Query: 2 PEVYFTGGR 10
P ++F+G R
Sbjct: 162 PRIFFSGNR 170


>sp|HIS6_METJA|IMIDAZOLE glycerol phosphate synthase subunit|Methanocaldococcus jannaschii

Query: 3 EVYFTGGR 10
EVY GGR
Sbjct: 159 EVYIYGGR 166


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 2 PEVYFT 7
PEVY+T
Sbjct: 480 PEVYYT 485


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PEVYFT 7
PEVY+T
Sbjct: 480 PEVYYT 485


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PEVYFT 7
PEVY+T
Sbjct: 480 PEVYYT 485


>sp|ISCS_METTE|CYSTEINE desulfurase IscS|Methanosarcina thermophila

Query: 3 EVYFTGG 9
E+YFT G
Sbjct: 78 EIYFTSG 84


>sp|TRPF_METTH|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 APEVYFTGG 9
APEV GG
Sbjct: 171 APEVALAGG 179


>sp|RLME_ARCFU|RIBOSOMAL RNA large subunit methyltransferase|Archaeoglobus fulgidus (strain

Query: 1 APEVYFTGGR 10
+ EVYF G R
Sbjct: 178 SAEVYFIGKR 187


>sp|HIS6_PYRAE|IMIDAZOLE glycerol phosphate synthase subunit|Pyrobaculum aerophilum (strain

Query: 3 EVYFTGGR 10
EVY GGR
Sbjct: 142 EVYVKGGR 149


>sp|Y625_METJA|UNCHARACTERIZED ATP-binding protein MJ0625|Methanocaldococcus jannaschii (strain

Query: 4 VYFTGGR 10
+YF GG+
Sbjct: 142 IYFNGGK 148


>sp|Y3526_METJA|UNCHARACTERIZED ATP-binding protein MJECL26|Methanocaldococcus jannaschii (strain

Query: 4 VYFTGGR 10
+YF GG+
Sbjct: 146 IYFNGGK 152


>sp|Y3401_METJA|UNCHARACTERIZED protein MJECS01|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EVYFTGG 9
+VYF GG
Sbjct: 218 KVYFVGG 224


>sp|APGM_METPE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosphaerula palustris (strain ATCC

Query: 2 PEVYFTG 8
PE Y+TG
Sbjct: 71 PESYYTG 77


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 1 APEVYFTG 8
AP+ Y+TG
Sbjct: 541 APKPYYTG 548


>sp|CBIT_ARCFU|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 APEVYFTGG 9
+P+V F GG
Sbjct: 83 SPDVVFIGG 91


>sp|ARGC_META3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 PEVYFTGGR 10
PE+Y TG +
Sbjct: 87 PELYETGSK 95


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 1 APEVYFTG 8
AP Y+TG
Sbjct: 541 APREYYTG 548


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 1 APEVYFTG 8
AP Y+TG
Sbjct: 541 APREYYTG 548




28|SequenceR|145|136|KIYREAPEVY

>sp|DCDA_METTH|DIAMINOPIMELATE decarboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 REAPEVY 10
REAPEVY
Sbjct: 176 REAPEVY 182


>sp|ARGJ_ARCFU|ARGININE biosynthesis bifunctional protein ArgJ|Archaeoglobus fulgidus

Query: 2 IYREAPEVY 10
I ++APEVY
Sbjct: 113 IRKKAPEVY 121


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 2 IYREAPE 8
+YREAP+
Sbjct: 466 VYREAPQ 472


>sp|EF2_HALMA|ELONGATION factor 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 IYREAPE 8
+YREAP+
Sbjct: 465 VYREAPQ 471


>sp|HTPX2_SACS2|PROTEASE HtpX homolog 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 YREAPEVY 10
+RE P+VY
Sbjct: 98 FREVPKVY 105


>sp|RF1_THESM|PEPTIDE chain release factor subunit|Thermococcus sibiricus (strain DSM

Query: 1 KIYREAPEV 9
K+YR+ PE
Sbjct: 77 KLYRQTPET 85


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 YREAPEV 9
YRE PE+
Sbjct: 680 YREMPEI 686


>sp|Y1345_METJA|TPR repeat-containing protein MJ1345|Methanocaldococcus jannaschii

Query: 4 REAPEVY 10
RE+P+VY
Sbjct: 42 RESPDVY 48


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KIYREAPEV 9
K+Y E PEV
Sbjct: 1157 KLYNEDPEV 1165


>sp|TF2B_AERPE|TRANSCRIPTION initiation factor IIB|Aeropyrum pernix (strain ATCC 700893

Query: 1 KIYREAPE 8
KIYREA E
Sbjct: 146 KIYREAME 153


>sp|RL34_METM7|LARGE ribosomal subunit protein eL34|Methanococcus maripaludis (strain

Query: 1 KIYREAP 7
K+YR+AP
Sbjct: 13 KVYRKAP 19


>sp|RL34_METM5|LARGE ribosomal subunit protein eL34|Methanococcus maripaludis (strain

Query: 1 KIYREAP 7
K+YR+AP
Sbjct: 13 KVYRKAP 19


>sp|Y290_METJA|UNCHARACTERIZED protein MJ0290|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IYREAPEVY 10
I +E PEVY
Sbjct: 91 ILKEIPEVY 99


>sp|RL34_METMP|LARGE ribosomal subunit protein eL34|Methanococcus maripaludis (strain

Query: 1 KIYREAP 7
K+YR+AP
Sbjct: 13 KVYRKAP 19


>sp|CMR7A_SACS2|CRISPR system CMR subunit Cmr7|Saccharolobus solfataricus (strain ATCC

Query: 1 KIYREAPEVY 10
K+YR+ E++
Sbjct: 176 KLYRDVEEIF 185


>sp|RF1_THEON|PEPTIDE chain release factor subunit|Thermococcus onnurineus (strain NA1)

Query: 1 KIYREAPE 8
K+YR+ PE
Sbjct: 77 KLYRKTPE 84


>sp|DNLI2_METAC|DNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KIYREA 6
KIYREA
Sbjct: 398 KIYREA 403


>sp|AGL16_SULAC|ARCHAEAL glycosylation protein 16|Sulfolobus acidocaldarius (strain ATCC

Query: 2 IYREAPEV 9
IYR++P V
Sbjct: 70 IYRDSPSV 77


>sp|DNLI2_METMA|DNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KIYREA 6
KIYREA
Sbjct: 398 KIYREA 403


>sp|Y090_METJA|UNCHARACTERIZED protease MJ0090|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KIYREA 6
KIYREA
Sbjct: 262 KIYREA 267


>sp|MVK_THEKO|MEVALONATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KIYREAPEVY 10
K Y E PE++
Sbjct: 211 KNYEEMPEIF 220




29|SequenceR|150|141|PLTRDKIYRE

>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PLTRDKIYRE 10
P DKI+RE
Sbjct: 695 PFVTDKIWRE 704


>sp|SYK_SACS2|LYSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PLTRDKIYRE 10
P+ +DK++RE
Sbjct: 417 PILQDKLFRE 426


>sp|RFCS_METMA|REPLICATION factor C small subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PLTRDKIYR 9
P++R+ IYR
Sbjct: 224 PISRETIYR 232


>sp|DPHB_THEAC|DIPHTHINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PLTRDKI 7
PLTRD+I
Sbjct: 56 PLTRDEI 62


>sp|MTBB2_METMA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LTRDKIYRE 10
LT+DKI E
Sbjct: 17 LTKDKIMEE 25


>sp|GLPK_PYRFU|GLYCEROL kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 TRDKIYR 9
TR+K+YR
Sbjct: 467 TREKLYR 473


>sp|HFLX_SACS2|GTPASE HflX|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LTRDKIYR 9
L RDKIY+
Sbjct: 343 LLRDKIYQ 350


>sp|MTBB3_METMA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LTRDKIYRE 10
LT+DKI E
Sbjct: 17 LTKDKIIEE 25


>sp|ARGC_ARCFU|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LTRDKIYR 9
LTR+++YR
Sbjct: 245 LTREELYR 252


>sp|TMG10_PYRAB|TRNA (guanine(10)-N2)-dimethyltransferase|Pyrococcus abyssi (strain GE5

Query: 1 PLTRDKIYR 9
P+ RD++Y+
Sbjct: 264 PMDRDELYK 272


>sp|DPCKG_METMA|GTP-DEPENDENT dephospho-CoA kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 TRDKIYRE 10
RDK+Y E
Sbjct: 84 NRDKVYEE 91


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PLTRDKIYR 9
P +DK+YR
Sbjct: 461 PEWKDKVYR 469


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PLTRDKIY 8
PLT D++Y
Sbjct: 113 PLTVDEVY 120


>sp|GLPK_PYRAB|GLYCEROL kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 TRDKIYR 9
TR+K+YR
Sbjct: 467 TREKLYR 473


>sp|SYS_METLZ|SERINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LTRDKIYRE 10
L +DK++RE
Sbjct: 34 LEQDKLFRE 42


>sp|DPCKG_METAC|GTP-DEPENDENT dephospho-CoA kinase|Methanosarcina acetivorans (strain ATCC

Query: 3 TRDKIYRE 10
RDK+Y E
Sbjct: 84 NRDKVYEE 91




30|SequenceR|155|146|IVSHFPLTRD

>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IVSHFPLTRD 10
I H PLTRD
Sbjct: 621 ITHHRPLTRD 630


>sp|RL6_STAMF|LARGE ribosomal subunit protein uL6|Staphylothermus marinus (strain ATCC

Query: 1 IVSHFPLT 8
I SHFP+T
Sbjct: 94 IYSHFPIT 101


>sp|RL6_THEON|LARGE ribosomal subunit protein uL6|Thermococcus onnurineus (strain NA1)

Query: 1 IVSHFPLT 8
+ SHFP+T
Sbjct: 93 VYSHFPMT 100


>sp|RL6_THEKO|LARGE ribosomal subunit protein uL6|Thermococcus kodakarensis (strain

Query: 1 IVSHFPLT 8
+ SHFP+T
Sbjct: 93 VYSHFPMT 100


>sp|RL6_DESA1|LARGE ribosomal subunit protein uL6|Desulfurococcus amylolyticus (strain

Query: 1 IVSHFPLT 8
I SHFP+T
Sbjct: 94 IFSHFPIT 101


>sp|RL6_PYRHO|LARGE ribosomal subunit protein uL6|Pyrococcus horikoshii (strain ATCC

Query: 1 IVSHFPLT 8
+ SHFP+T
Sbjct: 93 VYSHFPIT 100


>sp|RL6_PYRAB|LARGE ribosomal subunit protein uL6|Pyrococcus abyssi (strain GE5 /

Query: 1 IVSHFPLT 8
+ SHFP+T
Sbjct: 93 VYSHFPIT 100


>sp|RL6_THEGJ|LARGE ribosomal subunit protein uL6|Thermococcus gammatolerans (strain

Query: 1 IVSHFPLT 8
+ SHFP+T
Sbjct: 93 VYSHFPVT 100


>sp|RL6_HYPBU|LARGE ribosomal subunit protein uL6|Hyperthermus butylicus (strain DSM

Query: 1 IVSHFPLT 8
+ SHFP+T
Sbjct: 98 VYSHFPVT 105


>sp|RL6_SULTO|LARGE ribosomal subunit protein uL6|Sulfurisphaera tokodaii (strain DSM

Query: 1 IVSHFPLT 8
I +HFP+T
Sbjct: 93 IYTHFPVT 100


>sp|SYN_THEKO|ASPARAGINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VSHFPLTRD 10
V FP+T+D
Sbjct: 100 VDFFPITKD 108


>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 IVSHFP 6
IVSH+P
Sbjct: 97 IVSHYP 102


>sp|SYN_THEGJ|ASPARAGINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 VSHFPLTRD 10
V FP+T+D
Sbjct: 100 VDFFPITKD 108


>sp|COMD_METMP|SULFOPYRUVATE decarboxylase subunit alpha|Methanococcus maripaludis (strain DSM

Query: 2 VSHFPLTRD 10
+ H P+TR+
Sbjct: 40 IQHIPVTRE 48


>sp|CCA_METTH|CCA-ADDING enzyme|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 IVSHFPLT 8
I HFPLT
Sbjct: 66 IFIHFPLT 73


>sp|RL6_METST|LARGE ribosomal subunit protein uL6|Methanosphaera stadtmanae (strain

Query: 1 IVSHFPLT 8
+ +HFP+T
Sbjct: 93 VYAHFPMT 100


>sp|RL6_METS3|LARGE ribosomal subunit protein uL6|Methanobrevibacter smithii (strain

Query: 1 IVSHFPLT 8
+ +HFP+T
Sbjct: 93 VFAHFPMT 100


>sp|RL6_IGNH4|LARGE ribosomal subunit protein uL6|Ignicoccus hospitalis (strain KIN4/I

Query: 1 IVSHFPLT 8
+ SHFP++
Sbjct: 98 VFSHFPIS 105


>sp|RL7A_STAMF|LARGE ribosomal subunit protein eL8|Staphylothermus marinus (strain

Query: 1 IVSHFPLTRD 10
IV+H PL D
Sbjct: 63 IVAHLPLLCD 72


>sp|RL7A_SACS2|LARGE ribosomal subunit protein eL8|Saccharolobus solfataricus (strain

Query: 1 IVSHFPLTRD 10
IV+H PL D
Sbjct: 62 IVAHLPLLCD 71


>sp|RL7A_SACI7|LARGE ribosomal subunit protein eL8|Saccharolobus islandicus (strain

Query: 1 IVSHFPLTRD 10
IV+H PL D
Sbjct: 62 IVAHLPLLCD 71


>sp|RL7A_SACI6|LARGE ribosomal subunit protein eL8|Saccharolobus islandicus (strain

Query: 1 IVSHFPLTRD 10
IV+H PL D
Sbjct: 62 IVAHLPLLCD 71


>sp|RL7A_SACI4|LARGE ribosomal subunit protein eL8|Saccharolobus islandicus (strain

Query: 1 IVSHFPLTRD 10
IV+H PL D
Sbjct: 62 IVAHLPLLCD 71


>sp|RL7A_SACI3|LARGE ribosomal subunit protein eL8|Saccharolobus islandicus (strain

Query: 1 IVSHFPLTRD 10
IV+H PL D
Sbjct: 62 IVAHLPLLCD 71


>sp|RL7A_SACI2|LARGE ribosomal subunit protein eL8|Saccharolobus islandicus (strain

Query: 1 IVSHFPLTRD 10
IV+H PL D
Sbjct: 62 IVAHLPLLCD 71


>sp|RL7A_SACI1|LARGE ribosomal subunit protein eL8|Saccharolobus islandicus (strain

Query: 1 IVSHFPLTRD 10
IV+H PL D
Sbjct: 62 IVAHLPLLCD 71


>sp|RL7A_DESA1|LARGE ribosomal subunit protein eL8|Desulfurococcus amylolyticus

Query: 1 IVSHFPLTRD 10
IV+H PL D
Sbjct: 63 IVAHLPLLCD 72


>sp|RL6_PYRFU|LARGE ribosomal subunit protein uL6|Pyrococcus furiosus (strain ATCC

Query: 1 IVSHFPLT 8
+ SHFP++
Sbjct: 93 VYSHFPIS 100


>sp|TRM9_HALVD|TRNA (carboxymethyluridine(34)-5-O)-methyltransferase|Haloferax

Query: 1 IVSHFPLTRD 10
I SHF TR+
Sbjct: 17 IASHFASTRE 26




31|SequenceR|160|151|DDEHYIVSHF

>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 DEHYIVSHF 10
D +Y+V HF
Sbjct: 422 DTYYVVGHF 430


>sp|GLCV_SACS2|GLUCOSE import ATP-binding protein GlcV|Saccharolobus solfataricus (strain

Query: 2 DEHYIVSHF 10
D H++++HF
Sbjct: 129 DIHHVLNHF 137


>sp|QOX1_SULAC|QUINOL oxidase subunit 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DEHYIVSHF 10
+ +Y+V HF
Sbjct: 365 NSYYVVGHF 373


>sp|HIS6_METST|IMIDAZOLE glycerol phosphate synthase subunit|Methanosphaera stadtmanae

Query: 2 DEHYIV 7
DEHYIV
Sbjct: 147 DEHYIV 152


>sp|UPP_HALWD|URACIL phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DDEHYIV 7
DDE YIV
Sbjct: 206 DDEGYIV 212


>sp|GLCD1_PICTO|GLUCOSE 1-dehydrogenase 1|Picrophilus torridus (strain ATCC 700027

Query: 1 DDEHYIV 7
DDE Y+V
Sbjct: 124 DDERYLV 130


>sp|GMS_METOI|GMGT synthase|Methanothermococcus okinawensis (strain DSM 14208

Query: 2 DEHYIVSHF 10
+++Y+ SHF
Sbjct: 341 NKYYLASHF 349


>sp|TRPB1_METTH|TRYPTOPHAN synthase beta chain 1|Methanothermobacter thermautotrophicus

Query: 1 DDEHYIV 7
DD HY++
Sbjct: 180 DDTHYLI 186


>sp|POK_METJA|PANTOATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DDEHYIV 7
DD++YI+
Sbjct: 156 DDDYYII 162


>sp|QUEC2_SULTO|7-CYANO-7-DEAZAGUANINE synthase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DDEHYIVSH 9
+ E YIV+H
Sbjct: 100 EGERYIVTH 108




32|SequenceR|165|156|HPYNIDDEHY

>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 PYNIDDE 8
PY IDDE
Sbjct: 1031 PYEIDDE 1037


>sp|Y1137_METTH|UNCHARACTERIZED protein MTH_1137|Methanothermobacter thermautotrophicus (strain

Query: 1 HPYNIDDE 8
HP N DDE
Sbjct: 465 HPGNSDDE 472


>sp|TRPB1_METTH|TRYPTOPHAN synthase beta chain 1|Methanothermobacter thermautotrophicus

Query: 4 NIDDEHY 10
N+DD HY
Sbjct: 178 NVDDTHY 184


>sp|IF6_SULTO|TRANSLATION initiation factor 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PYNIDDE 8
P N+DDE
Sbjct: 72 PRNVDDE 78


>sp|DMRX_METMA|DIHYDROMETHANOPTERIN reductase (acceptor)|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PYNID 6
PYNID
Sbjct: 145 PYNID 149


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PYNIDDEHY 10
P+ I+DE Y
Sbjct: 1032 PWEIEDEEY 1040


>sp|Y052_METJA|UNCHARACTERIZED protein MJ0052|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PYNIDDEH 9
P +DDEH
Sbjct: 131 PLFLDDEH 138


>sp|PCNA_ARCFU|DNA polymerase sliding clamp|Archaeoglobus fulgidus (strain ATCC

Query: 3 YNIDDE 8
YNID+E
Sbjct: 59 YNIDEE 64


>sp|Y545_METJA|UNCHARACTERIZED protein MJ0545|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PYNIDD 7
PYN++D
Sbjct: 52 PYNVED 57


>sp|DEOC_PYRIL|DEOXYRIBOSE-PHOSPHATE aldolase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PYNIDDEHY 10
PY D+E Y
Sbjct: 123 PYLTDEERY 131


>sp|DEOC_PYRAR|DEOXYRIBOSE-PHOSPHATE aldolase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PYNIDDEHY 10
PY D+E Y
Sbjct: 123 PYLTDEERY 131


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 2 PYNIDD 7
PY IDD
Sbjct: 194 PYTIDD 199


>sp|DPHB_STAMF|DIPHTHINE synthase|Staphylothermus marinus (strain ATCC 43588

Query: 1 HPYNIDDEHY 10
HP +D+ HY
Sbjct: 239 HPIELDNLHY 248


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 YNIDDEHY 10
YN+DD Y
Sbjct: 485 YNLDDRSY 492


>sp|TMCA_PYRAB|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus abyssi (strain GE5 /

Query: 2 PYNIDD 7
PY IDD
Sbjct: 191 PYTIDD 196




33|SequenceR|170|161|QPGYKHPYNI

>sp|GLNA_METMP|GLUTAMINE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 2 PGYKHPYNI 10
PGY+ P NI
Sbjct: 304 PGYEAPVNI 312


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 3 GYKHPY 8
GY HPY
Sbjct: 935 GYAHPY 940


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 3 GYKHPY 8
GY HPY
Sbjct: 846 GYAHPY 851


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 3 GYKHPY 8
GY HPY
Sbjct: 953 GYAHPY 958


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 3 GYKHPY 8
GY HPY
Sbjct: 912 GYAHPY 917


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 3 GYKHPY 8
GY HPY
Sbjct: 952 GYAHPY 957


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 3 GYKHPY 8
GY HPY
Sbjct: 880 GYAHPY 885


>sp|SYFA_PYRHO|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PGYKHPYNI 10
PG K PY +
Sbjct: 234 PGKKQPYRV 242


>sp|SYFA_PYRAB|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 PGYKHPYNI 10
PG K PY +
Sbjct: 235 PGKKQPYRV 243


>sp|GLNA_METVO|GLUTAMINE synthetase|Methanococcus voltae

Query: 2 PGYKHPYNI 10
PGY+ P NI
Sbjct: 304 PGYEAPVNI 312


>sp|SYFA_PYRFU|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PGYKHPYNI 10
PG K PY +
Sbjct: 234 PGKKQPYRV 242


>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 1 QPGYKHPYNI 10
+P +HPY+I
Sbjct: 217 EPEEEHPYSI 226


>sp|NIFE_METMI|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 1 QPGYKHPYNI 10
+P +HPY+I
Sbjct: 217 EPEEEHPYSI 226


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 1 QPGYKHPY 8
+ GY HPY
Sbjct: 874 KAGYAHPY 881


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 3 GYKHPY 8
GY HPY
Sbjct: 882 GYAHPY 887


>sp|Y1363_THEAC|PUTATIVE HTH-type transcriptional regulatory protein|Thermoplasma

Query: 1 QPGYKHPYNI 10
+P Y+ P++I
Sbjct: 223 KPAYRMPFDI 232


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 3 GYKHPY 8
GY HPY
Sbjct: 868 GYAHPY 873


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 3 GYKHPY 8
GY HPY
Sbjct: 868 GYAHPY 873


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 3 GYKHPY 8
GY HPY
Sbjct: 868 GYAHPY 873


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 3 GYKHPY 8
GY HPY
Sbjct: 874 GYAHPY 879


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 3 GYKHPY 8
GY HPY
Sbjct: 868 GYAHPY 873


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GYKHPY 8
GY HPY
Sbjct: 939 GYAHPY 944


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 GYKHPY 8
GY HPY
Sbjct: 950 GYAHPY 955


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 GYKHPY 8
GY HPY
Sbjct: 941 GYAHPY 946


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 3 GYKHPY 8
GY HPY
Sbjct: 938 GYAHPY 943


>sp|TRPF_THEVO|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PGYKHP 7
PG KHP
Sbjct: 172 PGIKHP 177


>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PGYKHPYNI 10
PGY+ P NI
Sbjct: 312 PGYEAPVNI 320


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 3 GYKHPY 8
GY HPY
Sbjct: 868 GYAHPY 873


>sp|RL10_PYRAE|LARGE ribosomal subunit protein uL10|Pyrobaculum aerophilum (strain ATCC

Query: 1 QPGYKHPYNI 10
QPG K P++I
Sbjct: 120 QPGDKAPFDI 129


>sp|LYSY_SULTO|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GYKHPY 8
GY+HPY
Sbjct: 115 GYEHPY 120


>sp|ILVC_METKA|KETOL-ACID reductoisomerase (NADP(+))|Methanopyrus kandleri (strain AV19 /

Query: 3 GYKHPYNI 10
G+ H YNI
Sbjct: 105 GFSHAYNI 112


>sp|Y1572_METJA|PUTATIVE ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 5 KHPYNI 10
+HPYN+
Sbjct: 139 RHPYNL 144


>sp|SYFA_THESM|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus sibiricus (strain DSM 12597

Query: 2 PGYKHPY 8
PG K PY
Sbjct: 237 PGKKQPY 243


>sp|SYFA_THEON|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus onnurineus (strain NA1)

Query: 2 PGYKHPY 8
PG K PY
Sbjct: 235 PGKKQPY 241


>sp|SYFA_THEKO|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PGYKHPY 8
PG K PY
Sbjct: 235 PGKKQPY 241


>sp|SYFA_THEGJ|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 2 PGYKHPY 8
PG K PY
Sbjct: 234 PGKKQPY 240


>sp|PURL_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanopyrus kandleri (strain AV19 /

Query: 1 QPGYKHPYN 9
P Y PYN
Sbjct: 82 HPSYVDPYN 90


>sp|PURL_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanocaldococcus jannaschii (strain ATCC

Query: 1 QPGYKHPYN 9
P Y PYN
Sbjct: 85 HPSYIDPYN 93


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC

Query: 1 QPGYKHPYN 9
P Y PYN
Sbjct: 85 HPSYIDPYN 93


>sp|PURL_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina barkeri (strain Fusaro /

Query: 1 QPGYKHPYN 9
P Y PYN
Sbjct: 81 HPSYVDPYN 89


>sp|TNAA_HALSA|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 700922

Query: 1 QPGYKH 6
+PGY+H
Sbjct: 225 EPGYEH 230


>sp|TNAA_HALS3|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 29341

Query: 1 QPGYKH 6
+PGY+H
Sbjct: 225 EPGYEH 230


>sp|MER_ARCFU|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PGYKHPYNI 10
PG +PY+I
Sbjct: 60 PGVTNPYHI 68


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC

Query: 1 QPGYKHPYN 9
P Y PYN
Sbjct: 81 HPSYVDPYN 89


>sp|PYRC_HALSA|DIHYDROOROTASE salinarum (strain ATCC 700922

Query: 1 QPGYKH 6
QPG++H
Sbjct: 58 QPGFEH 63


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PGYKHPYNI 10
P Y+ PY I
Sbjct: 393 PVYQRPYRI 401


>sp|DMRX_METJA|DIHYDROMETHANOPTERIN reductase (acceptor)|Methanocaldococcus jannaschii (strain ATCC

Query: 5 KHPYNI 10
KHPY I
Sbjct: 234 KHPYEI 239


>sp|AROC_METS3|CHORISMATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 QPGYKHPYNI 10
+ GY HP N+
Sbjct: 353 RSGYIHPSNL 362


>sp|LYSY_IGNH4|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 GYKHPY 8
GY+HPY
Sbjct: 122 GYEHPY 127


>sp|PURL_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QPGYKHPYN 9
P Y PYN
Sbjct: 81 HPSYVDPYN 89


>sp|MTRE_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanothermobacter marburgensis

Query: 2 PGYKHPY 8
PG+ HP+
Sbjct: 159 PGFAHPF 165


>sp|MTRE_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanothermobacter

Query: 2 PGYKHPY 8
PG+ HP+
Sbjct: 159 PGFAHPF 165


>sp|SYFA_METMJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PGYKHPY 8
PG HPY
Sbjct: 218 PGKVHPY 224


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 3 GYKHPY 8
GY HP+
Sbjct: 884 GYAHPF 889


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 3 GYKHPY 8
GY HP+
Sbjct: 878 GYAHPF 883


>sp|Y795_METJA|UNCHARACTERIZED protein MJ0795|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GYKHPYNI 10
YK+PYN+
Sbjct: 219 SYKNPYNL 226


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 3 GYKHPY 8
GY HP+
Sbjct: 877 GYAHPF 882


>sp|TOP6A_METMA|TYPE 2 DNA topoisomerase 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GYKHPYNI 10
GY+ P+N+
Sbjct: 178 GYQIPFNV 185


>sp|TOP6A_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GYKHPYNI 10
GY+ P+N+
Sbjct: 182 GYQIPFNV 189


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 3 GYKHPY 8
GY HP+
Sbjct: 870 GYAHPF 875


>sp|TOP6A_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 3 GYKHPYNI 10
GY+ P+N+
Sbjct: 178 GYQIPFNV 185


>sp|SYFA_METHJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PGYKHPY 8
PG HPY
Sbjct: 214 PGKIHPY 220


>sp|Y1082_METJA|UNCHARACTERIZED protein MJ1082|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GYKHPYN 9
GYK+ YN
Sbjct: 80 GYKYIYN 86


>sp|CBIHC_ARCFU|COBALAMIN biosynthesis protein CbiHC|Archaeoglobus fulgidus (strain ATCC

Query: 3 GYKHPYNI 10
GY + YNI
Sbjct: 242 GYSNKYNI 249


>sp|AGLQ_HALVD|ARCHAEAL glycosylation protein Q|Haloferax volcanii (strain ATCC 29605

Query: 4 YKHPYN 9
+ HPYN
Sbjct: 298 FSHPYN 303


>sp|RS12_PYRAE|SMALL ribosomal subunit protein uS12|Pyrobaculum aerophilum (strain

Query: 2 PGYKHPYNI 10
PG K PY +
Sbjct: 2 PGKKSPYGL 10


>sp|RS12_PYRAR|SMALL ribosomal subunit protein uS12|Pyrobaculum arsenaticum (strain

Query: 2 PGYKHPYNI 10
PG K PY +
Sbjct: 2 PGKKSPYGL 10


>sp|RS12_PYRIL|SMALL ribosomal subunit protein uS12|Pyrobaculum islandicum (strain DSM

Query: 2 PGYKHPYNI 10
PG K PY +
Sbjct: 2 PGKKSPYGL 10




34|SequenceR|175|166|DACGGQPGYK

>sp|SODF_METTH|SUPEROXIDE dismutase [Fe]|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DACGGQPGYK 10
D CGG+P K
Sbjct: 92 DECGGEPSGK 101


>sp|SODF_METTM|SUPEROXIDE dismutase [Fe]|Methanothermobacter marburgensis (strain ATCC

Query: 1 DACGGQP 7
D CGG+P
Sbjct: 89 DECGGEP 95


>sp|RPO5_METLZ|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanocorpusculum labreanum (strain

Query: 2 ACGGQPG 8
ACG +PG
Sbjct: 49 ACGAKPG 55


>sp|Y978_META3|UPF0285 protein Maeo_0978|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DACGGQPG 8
DAC G PG
Sbjct: 176 DACIGAPG 183


>sp|HIS8_METBF|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ACGGQP 7
ACGG+P
Sbjct: 133 ACGGKP 138


>sp|HIS8_METAC|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ACGGQP 7
ACGG+P
Sbjct: 134 ACGGKP 139


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 1 DACGGQPGYK 10
+A GG P YK
Sbjct: 495 EALGGTPTYK 504


>sp|RNJL_METJA|RNASE J-like protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DACGGQPGYK 10
D CG P YK
Sbjct: 59 DHCGAIPFYK 68


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ACGGQPG 8
A GGQPG
Sbjct: 552 ALGGQPG 558


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 CGGQPGYK 10
CG +P YK
Sbjct: 176 CGSKPVYK 183


>sp|Y1080_METJA|UNCHARACTERIZED protein MJ1080|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GGQPGY 9
GG PGY
Sbjct: 71 GGMPGY 76


>sp|TRUD_THEAC|PROBABLE tRNA pseudouridine synthase D|Thermoplasma acidophilum (strain ATCC

Query: 3 CGGQPGY 9
CGG P Y
Sbjct: 148 CGGFPNY 154


>sp|IF2B_METB6|TRANSLATION initiation factor 2 subunit|Methanoregula boonei (strain DSM 21154

Query: 1 DACGGQ 6
DACGG
Sbjct: 125 DACGGH 130


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 DACGGQP 7
D CG QP
Sbjct: 39 DNCGDQP 45


>sp|Y1209_PYRHO|UNCHARACTERIZED protein PH1209|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 GQPGYK 10
G PGYK
Sbjct: 19 GSPGYK 24


>sp|IF2G_METM6|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C6

Query: 1 DACGGQ 6
DACGG+
Sbjct: 74 DACGGK 79


>sp|IF2B_METMJ|TRANSLATION initiation factor 2 subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 DACGGQ 6
DACGG
Sbjct: 125 DACGGH 130


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 2 ACGGQPG 8
AC G PG
Sbjct: 496 ACAGNPG 502


>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 2 ACGGQPG 8
AC G PG
Sbjct: 498 ACAGNPG 504


>sp|IF2G_METM7|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C7

Query: 1 DACGGQ 6
DACGG+
Sbjct: 74 DACGGK 79


>sp|AATB_SULAC|A-TYPE ATP synthase subunit B|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 GGQPGY 9
GG PGY
Sbjct: 276 GGYPGY 281


>sp|MTXH_METAC|PUTATIVE methyltransferase mtx subunit H|Methanosarcina acetivorans

Query: 4 GGQPG 8
GGQPG
Sbjct: 19 GGQPG 23


>sp|AATB_SULTO|A-TYPE ATP synthase subunit B|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GGQPGY 9
GG PGY
Sbjct: 275 GGYPGY 280


>sp|AATB_SACS2|A-TYPE ATP synthase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 4 GGQPGY 9
GG PGY
Sbjct: 273 GGYPGY 278


>sp|AATB_SACI7|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 GGQPGY 9
GG PGY
Sbjct: 273 GGYPGY 278


>sp|AATB_SACI6|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.4 /

Query: 4 GGQPGY 9
GG PGY
Sbjct: 273 GGYPGY 278


>sp|AATB_SACI4|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.14.25 /

Query: 4 GGQPGY 9
GG PGY
Sbjct: 273 GGYPGY 278


>sp|AATB_SACI3|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.27)

Query: 4 GGQPGY 9
GG PGY
Sbjct: 273 GGYPGY 278


>sp|AATB_SACI2|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 GGQPGY 9
GG PGY
Sbjct: 273 GGYPGY 278


>sp|AATB_SACI1|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 GGQPGY 9
GG PGY
Sbjct: 273 GGYPGY 278


>sp|SUI1_SULAC|PROTEIN translation factor SUI1 homolog|Sulfolobus acidocaldarius

Query: 1 DACGGQP 7
D CGG P
Sbjct: 3 DLCGGLP 9


>sp|MTXH_METBF|PUTATIVE methyltransferase mtx subunit H|Methanosarcina barkeri (strain

Query: 4 GGQPG 8
GGQPG
Sbjct: 19 GGQPG 23


>sp|AATB_METS5|A-TYPE ATP synthase subunit B|Metallosphaera sedula (strain ATCC 51363

Query: 4 GGQPGY 9
GG PGY
Sbjct: 276 GGYPGY 281


>sp|MTXH_METMA|PUTATIVE methyltransferase mtx subunit H|Methanosarcina mazei (strain ATCC

Query: 4 GGQPG 8
GGQPG
Sbjct: 19 GGQPG 23


>sp|IDSA_METTH|SHORT chain isoprenyl diphosphate synthase|Methanothermobacter

Query: 1 DACGGQPG 8
+A GG PG
Sbjct: 56 EAVGGDPG 63


>sp|GATE_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Aeropyrum pernix (strain ATCC 700893

Query: 1 DACGGQPG 8
+A GG PG
Sbjct: 369 EAVGGDPG 376


>sp|MVHB_METFE|POLYFERREDOXIN protein MvhB|Methanothermus fervidus

Query: 1 DACGGQP 7
D CGG+P
Sbjct: 35 DMCGGEP 41


>sp|Y078_METKA|UPF0285 protein MK0078|Methanopyrus kandleri (strain AV19 /

Query: 1 DACGGQPG 8
DAC G PG
Sbjct: 183 DACLGAPG 190


>sp|MTRH_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina barkeri (strain

Query: 4 GGQPG 8
GGQPG
Sbjct: 19 GGQPG 23


>sp|MTRH_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina acetivorans (strain

Query: 4 GGQPG 8
GGQPG
Sbjct: 19 GGQPG 23


>sp|MTRH_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanopyrus kandleri (strain AV19

Query: 4 GGQPG 8
GGQPG
Sbjct: 20 GGQPG 24


>sp|MTRH_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus maripaludis (strain

Query: 4 GGQPG 8
GGQPG
Sbjct: 19 GGQPG 23


>sp|MTRH_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina mazei (strain ATCC

Query: 4 GGQPG 8
GGQPG
Sbjct: 19 GGQPG 23


>sp|MVHB_METTH|POLYFERREDOXIN protein MvhB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DACGGQP 7
D CGG+P
Sbjct: 35 DICGGEP 41


>sp|MTRH_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus vannielii (strain

Query: 4 GGQPG 8
GGQPG
Sbjct: 19 GGQPG 23


>sp|MVHB_METTM|POLYFERREDOXIN protein MvhB|Methanothermobacter marburgensis (strain ATCC

Query: 1 DACGGQP 7
D CGG+P
Sbjct: 35 DICGGEP 41


>sp|MTRH_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanocaldococcus jannaschii

Query: 4 GGQPG 8
GGQPG
Sbjct: 19 GGQPG 23


>sp|TRPE_METTH|ANTHRANILATE synthase component 1|Methanothermobacter thermautotrophicus (strain

Query: 3 CGGQPGY 9
CGG GY
Sbjct: 103 CGGLVGY 109


>sp|MTRH_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus maripaludis (strain

Query: 4 GGQPG 8
GGQPG
Sbjct: 19 GGQPG 23


>sp|KAD_HALSA|ADENYLATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DACGG 5
DACGG
Sbjct: 150 DACGG 154


>sp|KAD_HALS3|ADENYLATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DACGG 5
DACGG
Sbjct: 150 DACGG 154


>sp|TRPE_METTM|ANTHRANILATE synthase component 1|Methanothermobacter marburgensis (strain ATCC

Query: 3 CGGQPGY 9
CGG GY
Sbjct: 105 CGGLVGY 111


>sp|AROA_METMJ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanoculleus marisnigri (strain ATCC

Query: 5 GQPGY 9
GQPGY
Sbjct: 141 GQPGY 145


>sp|RNFC_METAC|ION-TRANSLOCATING oxidoreductase complex subunit C|Methanosarcina acetivorans (strain

Query: 1 DACGGQPG 8
+ACGG G
Sbjct: 316 EACGGYKG 323


>sp|MTRH_META3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus aeolicus (strain ATCC

Query: 4 GGQPG 8
GGQPG
Sbjct: 19 GGQPG 23




35|SequenceR|180|171|EFVSHDACGG

>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 1 EFVSHDACG 9
E+VSH CG
Sbjct: 38 EWVSHAPCG 46


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 1 EFVSHDACG 9
E+VSH CG
Sbjct: 38 EWVSHAPCG 46


>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain

Query: 1 EFVSHDACG 9
E+VSH CG
Sbjct: 42 EWVSHAPCG 50


>sp|NCPPR_PYRHO|NAD(P)H coenzyme A polysulfide/persulfide reductase|Pyrococcus horikoshii

Query: 1 EFVSHDACG 9
E+VSH CG
Sbjct: 41 EWVSHAPCG 49


>sp|TOP6A_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EFVSHDA 7
EFV HDA
Sbjct: 180 EFVDHDA 186


>sp|DNAK_CENSY|CHAPERONE protein DnaK|Cenarchaeum symbiosum (strain A)

Query: 2 FVSHDACG 9
F+SHD+ G
Sbjct: 261 FISHDSSG 268


>sp|HEM2_METJA|DELTA-AMINOLEVULINIC acid dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EFVSHDACG 9
E+ SH CG
Sbjct: 132 EYTSHGHCG 140


>sp|AROA_METS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 FVSHDAC 8
FV HD C
Sbjct: 217 FVRHDDC 223


>sp|VORB_PYRHO|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus horikoshii (strain ATCC

Query: 2 FVSHDACGG 10
F H AC G
Sbjct: 20 FAGHTACQG 28


>sp|VORB_PYRAB|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus abyssi (strain GE5 /

Query: 2 FVSHDACGG 10
F H AC G
Sbjct: 20 FAGHTACQG 28


>sp|SODM2_HALME|SUPEROXIDE dismutase [Mn] 2|Haloferax mediterranei (Halobacterium

Query: 3 VSHDACG 9
VSH+ CG
Sbjct: 32 VSHNGCG 38


>sp|FPOF_METMA|F(420)H(2) dehydrogenase subunit F|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EFVSHDACGG 10
E + HD C
Sbjct: 7 EVIQHDVCAA 16




36|SequenceR|185|176|YKRMREFVSH

>sp|RNZ_CENSY|RIBONUCLEASE Z|Cenarchaeum symbiosum (strain A)

Query: 2 KRMREFVSH 10
K+MR F++H
Sbjct: 52 KKMRIFITH 60


>sp|OTC_METAC|ORNITHINE carbamoyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KRMREFVS 9
KR+REF S
Sbjct: 234 KRLREFAS 241


>sp|KHK_HALVD|KETOHEXOKINASE volcanii (strain ATCC 29605

Query: 3 RMREFVS 9
R+REFVS
Sbjct: 38 RVREFVS 44


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RMREFVSH 10
+MR F+SH
Sbjct: 61 QMRSFISH 68


>sp|PYRC_METKA|DIHYDROOROTASE kandleri (strain AV19 /

Query: 3 RMREFV 8
RMREFV
Sbjct: 370 RMREFV 375


>sp|CFBD_METAC|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina acetivorans

Query: 4 MREFVSH 10
MR+F++H
Sbjct: 257 MRDFIAH 263


>sp|AAT_SULTO|ASPARTATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KRMREFV 8
KRM+EF+
Sbjct: 387 KRMKEFI 393


>sp|RNZ_NITMS|RIBONUCLEASE Z|Nitrosopumilus maritimus (strain SCM1)

Query: 2 KRMREFVSH 10
K+M+ FV+H
Sbjct: 52 KKMKIFVTH 60


>sp|RFCS_THEPD|REPLICATION factor C small subunit|Thermofilum pendens (strain DSM 2475

Query: 2 KRMREFVSH 10
KR++EFV +
Sbjct: 26 KRLKEFVKN 34


>sp|HIS4_PYRFU|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Pyrococcus furiosus (strain ATCC

Query: 1 YKRMREFVS 9
YK +R+FV+
Sbjct: 150 YKMLRKFVN 158


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KRMREFV 8
KR+REF+
Sbjct: 97 KRVREFI 103


>sp|THPR_METJA|RNA 2',3'-cyclic phosphodiesterase|Methanocaldococcus jannaschii

Query: 1 YKRMREFVSH 10
+K+ RE+V H
Sbjct: 109 FKKEREYVPH 118


>sp|CYSC_PYRAB|PROBABLE adenylyl-sulfate kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 YKRMREF 7
YKR+RE+
Sbjct: 86 YKRIREY 92


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KRMREFV 8
KR+REF+
Sbjct: 97 KRVREFI 103


>sp|RAD50_THEVO|DNA double-strand break repair Rad50|Thermoplasma volcanium (strain

Query: 3 RMREFVSH 10
R+R F+SH
Sbjct: 7 RLRNFLSH 14




37|SequenceR|190|181|VGTMQYKRMR

>sp|COBQ_METKA|PROBABLE cobyric acid synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 VGTMQYKRMR 10
+GTM Y+ R
Sbjct: 95 IGTMSYREYR 104


>sp|Y006_METJA|UNCHARACTERIZED oxidoreductase MJ0006|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VGTMQYKR 8
VGT YKR
Sbjct: 27 VGTYPYKR 34




38|SequenceR|195|186|QTVEEVGTMQ

>sp|LONB_METTH|ARCHAEAL Lon protease|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 VEEVGTMQ 10
++E+GTM+
Sbjct: 245 IDEIGTMK 252




39|SequenceR|200|191|EEQPIQTVEE

>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EQPIQTVEE 10
E+P +TVEE
Sbjct: 832 EKPSETVEE 840


>sp|Y1259_THEVO|UPF0292 protein TV1259|Thermoplasma volcanium (strain ATCC 51530

Query: 4 PIQTVEE 10
PI+TVEE
Sbjct: 98 PIRTVEE 104


>sp|THSB_SULTO|CHAPERONIN subunit beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EEQPIQTVEE 10
EEQ ++T+EE
Sbjct: 139 EEQALKTIEE 148




40|SequenceR|205|196|GNAAHEEQPI

>sp|PYRH_METBU|URIDYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GNAAHEEQP 9
GN AH E P
Sbjct: 84 GNTAHPEPP 92


>sp|THSA_METTH|CHAPERONIN subunit alpha|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 AAHEEQP 9
AAHEE P
Sbjct: 461 AAHEESP 467


>sp|PURQ_METM5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanococcus maripaludis (strain C5 /

Query: 1 GNAAHEEQPI 10
GN+A++E P+
Sbjct: 188 GNSANQEYPL 197


>sp|GGR_THEGJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 AAHEEQPI 10
A HE++PI
Sbjct: 136 AKHEDEPI 143


>sp|GGR_THEKO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 AAHEEQPI 10
A HE++P+
Sbjct: 136 AKHEDEPV 143


>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 4 AHEEQPI 10
AHE++P+
Sbjct: 462 AHEDEPV 468


>sp|RIBL_HALTV|FAD synthase|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 GNAAHEEQPI 10
N H+E+PI
Sbjct: 40 SNVDHKEKPI 49


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 1 GNAAHEEQPI 10
GNA EE P+
Sbjct: 430 GNAIVEEPPV 439


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 5 HEEQP 9
HEEQP
Sbjct: 275 HEEQP 279




41|SequenceR|210|201|RLLEPGNAAH

>sp|PFDA_AERPE|PREFOLDIN subunit alpha|Aeropyrum pernix (strain ATCC 700893

Query: 1 RLLEPGNA 8
RLLEPG A
Sbjct: 71 RLLEPGKA 78


>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RLLEPGNA 8
RLLEP NA
Sbjct: 374 RLLEPANA 381


>sp|FTTA_PYRAB|TRANSCRIPTION termination factor FttA|Pyrococcus abyssi (strain GE5 /

Query: 1 RLLEPGNA 8
RLLEP NA
Sbjct: 371 RLLEPANA 378


>sp|RL30E_METVS|LARGE ribosomal subunit protein eL30|Methanococcus vannielii (strain

Query: 2 LLEPGNAA 9
+LEPGN+A
Sbjct: 91 VLEPGNSA 98


>sp|RL30E_METM6|LARGE ribosomal subunit protein eL30|Methanococcus maripaludis (strain

Query: 2 LLEPGNAA 9
+LEPGN+A
Sbjct: 91 VLEPGNSA 98


>sp|RL30E_METM5|LARGE ribosomal subunit protein eL30|Methanococcus maripaludis (strain

Query: 2 LLEPGNAA 9
+LEPGN+A
Sbjct: 91 VLEPGNSA 98


>sp|RL30E_METMP|LARGE ribosomal subunit protein eL30|Methanococcus maripaludis (strain

Query: 2 LLEPGNAA 9
+LEPGN+A
Sbjct: 85 VLEPGNSA 92


>sp|RL30E_METM7|LARGE ribosomal subunit protein eL30|Methanococcus maripaludis (strain

Query: 2 LLEPGNAA 9
+LEPGN+A
Sbjct: 91 VLEPGNSA 98


>sp|RPO1C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Archaeoglobus fulgidus (strain ATCC

Query: 2 LLEPGNAA 9
L+EPG AA
Sbjct: 52 LMEPGEAA 59


>sp|CDPAS_THEPD|CDP-ARCHAEOL synthase|Thermofilum pendens (strain DSM 2475

Query: 2 LLEPGNAA 9
+L+PGN A
Sbjct: 33 VLQPGNVA 40


>sp|DGGGP_NATPD|DIGERANYLGERANYLGLYCERYL phosphate synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LLEPGNA 8
LL PGNA
Sbjct: 10 LLRPGNA 16


>sp|MUTS1_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 3 LEPGNAAH 10
EPG A+H
Sbjct: 203 FEPGRASH 210


>sp|Y226_ARCFU|PUTATIVE NADH dehydrogenase/NAD(P)H nitroreductase AF_0226|Archaeoglobus

Query: 1 RLLEPGNAA 9
++LE GNAA
Sbjct: 28 KILEAGNAA 36


>sp|PYRG_HALSA|CTP synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 LEPGNAAH 10
+EPG AH
Sbjct: 448 IEPGTLAH 455


>sp|PYRG_HALS3|CTP synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 LEPGNAAH 10
+EPG AH
Sbjct: 448 IEPGTLAH 455


>sp|G1PDH_STAMF|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Staphylothermus marinus (strain ATCC 43588

Query: 2 LLEPGNAAH 10
LL PG A H
Sbjct: 263 LLAPGKALH 271




42|SequenceR|215|206|TTRKKRLLEP

>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 1 TTRKKRLLE 9
T+R+K LLE
Sbjct: 336 TSRQKELLE 344




43|SequenceR|220|211|NKEASTTRKK

***** No hits found ******


44|SequenceR|225|216|YLQCTNKEAS

>sp|TRPE_METTM|ANTHRANILATE synthase component 1|Methanothermobacter marburgensis (strain ATCC

Query: 1 YLQCTNK 7
YL+C NK
Sbjct: 435 YLECQNK 441


>sp|DNLI_HALSA|DNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 QCTNKEA 9
QCT++EA
Sbjct: 153 QCTSREA 159


>sp|DNLI_HALS3|DNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 QCTNKEA 9
QCT++EA
Sbjct: 153 QCTSREA 159


>sp|Y1614_METAC|MACRO domain-containing protein MA_1614|Methanosarcina acetivorans

Query: 1 YLQCTNKEA 9
+L C NKEA
Sbjct: 175 FLVCYNKEA 183




45|SequenceR|230|221|HDTQIYLQCT

>sp|Y1562_ARCFU|UNCHARACTERIZED protein AF_1562|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HDTQIYLQCT 10
HDT YL+ T
Sbjct: 59 HDTHYYLEET 68


>sp|AROE_THEVO|SHIKIMATE dehydrogenase (NADP(+))|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HDTQIYLQCT 10
+D IY+ CT
Sbjct: 174 NDYDIYINCT 183


>sp|AROE_THEAC|SHIKIMATE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DTQIYLQCT 10
D IY+ CT
Sbjct: 174 DYDIYVNCT 182


>sp|VAPC1_METJA|RIBONUCLEASE VapC1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DTQIYLQCT 10
D +Y+ CT
Sbjct: 99 DADLYIACT 107




46|SequenceR|235|226|YKFFLHDTQI

>sp|RL1_CENSY|LARGE ribosomal subunit protein uL1|Cenarchaeum symbiosum (strain A)

Query: 1 YKFFLHDTQI 10
Y FFL DTQ+
Sbjct: 101 YDFFLADTQL 110


>sp|RL1_METHJ|LARGE ribosomal subunit protein uL1|Methanospirillum hungatei JF-1

Query: 1 YKFFLHDTQI 10
++FFL +TQ+
Sbjct: 104 HQFFLAETQV 113


>sp|Y1445_THESM|UPF0248 protein TSIB_1445|Thermococcus sibiricus (strain DSM 12597

Query: 3 FFLHDTQI 10
FF+ DTQI
Sbjct: 52 FFIEDTQI 59


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 3 FFLHDTQ 9
FF HDT+
Sbjct: 990 FFTHDTE 996


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KFFLHDTQI 10
K+FLHD+ +
Sbjct: 8 KYFLHDSGV 16


>sp|RL1_METTP|LARGE ribosomal subunit protein uL1|Methanothrix thermoacetophila (strain

Query: 1 YKFFLHDTQ 9
Y FF+ +TQ
Sbjct: 102 YDFFIAETQ 110


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 3 FFLHDT 8
FF HDT
Sbjct: 1134 FFTHDT 1139


>sp|SEPS_METBU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 KFFLHDTQI 10
K+++ DTQI
Sbjct: 274 KYYVPDTQI 282


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 FFLHDTQI 10
FF H TQ+
Sbjct: 507 FFKHPTQV 514


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 FFLHDTQI 10
FF H TQ+
Sbjct: 507 FFKHPTQV 514


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 FFLHDTQI 10
FF H TQ+
Sbjct: 507 FFKHPTQV 514


>sp|NADE_THEVO|NH(3)-DEPENDENT NAD(+) synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KFFLHD 7
KFFLH+
Sbjct: 43 KFFLHE 48


>sp|CAPPA_SULTO|PHOSPHOENOLPYRUVATE carboxylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YKFFLHDTQ 9
YK+ HD Q
Sbjct: 416 YKYIKHDLQ 424


>sp|FLAJ_METVO|FLAGELLA accessory protein J|Methanococcus voltae

Query: 1 YKFFLHDT 8
+K+F HDT
Sbjct: 386 WKYFGHDT 393




47|SequenceR|240|231|ERTGYYKFFL

>sp|TRPB_METLZ|TRYPTOPHAN synthase beta chain|Methanocorpusculum labreanum (strain ATCC

Query: 1 ERTGYYKFF 9
E+TGYY F
Sbjct: 3 EKTGYYGEF 11


>sp|RAD50_METAC|DNA double-strand break repair Rad50|Methanosarcina acetivorans (strain

Query: 1 ERTGYYK 7
ERTGY K
Sbjct: 174 ERTGYAK 180


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RTGYYKFFL 10
R G +KFFL
Sbjct: 417 RAGPHKFFL 425


>sp|AATA_HALSA|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 700922

Query: 1 ERTGYYKFF 9
ER GY++ F
Sbjct: 370 ERAGYFENF 378


>sp|AATA_HALS3|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 29341

Query: 1 ERTGYYKFF 9
ER GY++ F
Sbjct: 370 ERAGYFENF 378


>sp|CEDB_SULAC|DNA import protein CedB|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 YYKFFL 10
+YKFFL
Sbjct: 43 FYKFFL 48


>sp|TFE_THEPD|TRANSCRIPTION factor E|Thermofilum pendens (strain DSM 2475

Query: 1 ERTGYYKFF 9
E G+YK++
Sbjct: 69 ENIGWYKYY 77


>sp|APE2_SACS2|LEUCYL aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RTGYYKFF 9
RTG+Y+ F
Sbjct: 493 RTGFYRVF 500


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 ERTGYYKFFL 10
+RTG+ +FL
Sbjct: 162 DRTGHKPYFL 171


>sp|PIMT_STAMF|PROTEIN-L-ISOASPARTATE O-methyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 1 ERTGYYKF 8
ERTGY ++
Sbjct: 130 ERTGYIEY 137


>sp|VHTC_METMA|F420 non-reducing hydrogenase II cytochrome|Methanosarcina mazei (strain

Query: 1 ERTGYYK 7
E+TG+YK
Sbjct: 124 EKTGHYK 130




48|SequenceR|245|236|QAIVAERTGY

>sp|Y294_THEVO|PUTATIVE HTH-type transcriptional regulatory protein|Thermoplasma

Query: 2 AIVAERTG 9
AI+ ERTG
Sbjct: 76 AIIGERTG 83


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 4 VAERTGY 10
VAER GY
Sbjct: 689 VAERIGY 695


>sp|PDXS_DESA1|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Desulfurococcus amylolyticus

Query: 1 QAIVAERTG 9
QAI+AE G
Sbjct: 65 QAIIAEEAG 73


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 VAERTGY 10
VAER GY
Sbjct: 122 VAERLGY 128


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 4 VAERTGY 10
VAER GY
Sbjct: 122 VAERLGY 128


>sp|GLYA_PYRIL|SERINE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 VAERTGY 10
VAER GY
Sbjct: 305 VAERQGY 311




49|SequenceR|250|241|VHSSIQAIVA

>sp|Y394_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 VHSSIQAIVA 10
+H S QAIVA
Sbjct: 320 IHESGQAIVA 329




50|SequenceR|255|246|TDIAKVHSSI

>sp|RNJ_METJA|RIBONUCLEASE J|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TDIAKVHS 8
TDI+K+HS
Sbjct: 45 TDISKLHS 52


>sp|MPTA_THEKO|GTP cyclohydrolase MptA|Thermococcus kodakarensis (strain ATCC

Query: 2 DIAKVHSSI 10
++AKVHSS+
Sbjct: 76 EVAKVHSSL 84




51|SequenceR|260|251|TTQYITDIAK

>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YITDIAK 10
YITDIAK
Sbjct: 327 YITDIAK 333


>sp|DNAG_META3|DNA primase DnaG|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 QYITDIAK 10
QYITD AK
Sbjct: 117 QYITDRAK 124




52|SequenceR|265|256|IGSFDTTQYI

>sp|DNAG_METTP|DNA primase DnaG|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 SFDTTQYI 10
S DTT+YI
Sbjct: 3 SVDTTKYI 10


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 4 FDTTQY 9
FDTT+Y
Sbjct: 563 FDTTEY 568


>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC 700893

Query: 1 IGSFDTTQYI 10
+GSFDT + +
Sbjct: 122 LGSFDTDKML 131


>sp|ATGT_SULTO|TRNA-GUANINE(15) transglycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IGSFDTTQYI 10
+ SFD+ YI
Sbjct: 241 VDSFDSASYI 250




53|SequenceR|270|261|FSINRIGSFD

>sp|SURE_THEGJ|5'-NUCLEOTIDASE SurE|Thermococcus gammatolerans (strain DSM 15229

Query: 1 FSINRIGSFD 10
F+I R GSFD
Sbjct: 77 FAIARFGSFD 86


>sp|VAPC2_METJA|RIBONUCLEASE VapC2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FSINRIGSFD 10
+ IN+I SFD
Sbjct: 126 YKINKICSFD 135


>sp|SYR_SACS2|ARGININE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FSINRIGSFD 10
F +NRI SF+
Sbjct: 493 FDLNRITSFE 502


>sp|Y614_PYRHO|UNCHARACTERIZED protein PH0614|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FSINRIGSFD 10
FS+ RIG D
Sbjct: 104 FSVTRIGGAD 113


>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 1 FSINRIGSFD 10
+SIN IG F+
Sbjct: 224 YSINIIGEFN 233


>sp|NIFE_METMI|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 1 FSINRIGSFD 10
+SIN IG F+
Sbjct: 224 YSINIIGEFN 233


>sp|SURE_THEKO|5'-NUCLEOTIDASE SurE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FSINRIGSFD 10
F++ R G FD
Sbjct: 77 FALARFGDFD 86


>sp|PYRK_METJA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanocaldococcus

Query: 1 FSINRIGSF 9
FS+ R+G F
Sbjct: 56 FSVARVGEF 64


>sp|TRM1_METMP|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 3 INRIGSFD 10
IN++G FD
Sbjct: 306 INQVGCFD 313


>sp|TRM1_METMI|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 3 INRIGSFD 10
IN++G FD
Sbjct: 306 INQVGCFD 313


>sp|NIFH_METJA|NITROGENASE iron protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 INRIGSFD 10
+NR+G+F+
Sbjct: 106 LNRLGAFE 113


>sp|FLUC3_METBF|FLUORIDE-SPECIFIC ion channel FluC 3|Methanosarcina barkeri (strain Fusaro /

Query: 2 SINRIGSF 9
+IN IGSF
Sbjct: 38 TINTIGSF 45




54|SequenceR|275|266|IRKVMFSINR

***** No hits found ******


55|SequenceR|280|271|TTNIRIRKVM

>sp|TRPA_METAC|TRYPTOPHAN synthase alpha chain|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TTNIRIRKVM 10
TT+ RIRK++
Sbjct: 166 TTDARIRKIL 175


>sp|MVHD_METTM|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Methanothermobacter

Query: 2 TNIRIRKVM 10
TNIR+ +VM
Sbjct: 33 TNIRVIRVM 41


>sp|ENO_HALMA|ENOLASE marismortui (strain ATCC 43049

Query: 2 TNIRIRKVM 10
T+IR+R+V+
Sbjct: 5 TDIRLRRVL 13


>sp|MVHD_METTH|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Methanothermobacter

Query: 2 TNIRIRKVM 10
TNIR+ +VM
Sbjct: 33 TNIRVIRVM 41


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TNIRIRKV 9
TN+ +RKV
Sbjct: 79 TNVAVRKV 86




56|SequenceR|285|276|DKEDATTNIR

>sp|NIFH2_METTL|NITROGENASE iron protein 2|Methanothermococcus thermolithotrophicus

Query: 2 KEDATTNIR 10
K D T+N+R
Sbjct: 40 KHDCTSNLR 48




57|SequenceR|290|281|FPNTPDKEDA

>sp|AROD_METKA|3-DEHYDROQUINATE dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 1 FPNTPDKED 9
F NTP KE+
Sbjct: 116 FENTPPKEE 124


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 2 PNTPDKED 9
PN PD+E+
Sbjct: 371 PNKPDEEE 378


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 2 PNTPDKED 9
PN PD+E+
Sbjct: 371 PNKPDEEE 378


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PNTPDKED 9
PN PD+E+
Sbjct: 387 PNKPDEEE 394


>sp|Y053_NANEQ|UNCHARACTERIZED RNA methyltransferase NEQ053|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 FPNTPDKED 9
FPNTP E+
Sbjct: 428 FPNTPHIEN 436


>sp|TRPA_PYRAB|TRYPTOPHAN synthase alpha chain|Pyrococcus abyssi (strain GE5 /

Query: 2 PNTPDK 7
PNTPD+
Sbjct: 142 PNTPDE 147


>sp|AROA_METB6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 FPNTP 5
FPNTP
Sbjct: 79 FPNTP 83


>sp|TRPA_PYRFU|TRYPTOPHAN synthase alpha chain|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PNTPDK 7
PNTPD+
Sbjct: 142 PNTPDE 147


>sp|RRP42_THEVO|EXOSOME complex component Rrp42|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FPNTPDK 7
FP+TPD+
Sbjct: 73 FPDTPDQ 79


>sp|RRP42_THEAC|EXOSOME complex component Rrp42|Thermoplasma acidophilum (strain ATCC

Query: 1 FPNTPDK 7
FP+TPD+
Sbjct: 73 FPDTPDQ 79


>sp|DNAG_NATPD|DNA primase DnaG|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PNTPDKE 8
PNTPD E
Sbjct: 359 PNTPDDE 365


>sp|MPTA_ARCFU|GTP cyclohydrolase MptA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FPNTPD 6
FPN PD
Sbjct: 265 FPNAPD 270


>sp|TRPA_THEKO|TRYPTOPHAN synthase alpha chain|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PNTPDK 7
PNTPD+
Sbjct: 142 PNTPDE 147


>sp|TRPA_METVO|TRYPTOPHAN synthase alpha chain|Methanococcus voltae

Query: 2 PNTPDK 7
PNTPD+
Sbjct: 161 PNTPDE 166


>sp|GUAAA_METKA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanopyrus kandleri

Query: 2 PNTPDKED 9
PNT D ED
Sbjct: 30 PNTTDPED 37


>sp|MPTA_METAC|GTP cyclohydrolase MptA|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FPNTPD 6
FPN PD
Sbjct: 277 FPNLPD 282


>sp|AROD_METBU|3-DEHYDROQUINATE dehydratase|Methanococcoides burtonii (strain DSM 6242

Query: 1 FPNTPDKE 8
F TPDKE
Sbjct: 134 FERTPDKE 141


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PNTPDKED 9
P TP KED
Sbjct: 407 PGTPAKED 414


>sp|MPTA_METMA|GTP cyclohydrolase MptA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FPNTPD 6
FPN PD
Sbjct: 277 FPNLPD 282


>sp|MPTA_METBF|GTP cyclohydrolase MptA|Methanosarcina barkeri (strain Fusaro /

Query: 1 FPNTPD 6
FPN PD
Sbjct: 277 FPNLPD 282


>sp|RRP42_METAR|EXOSOME complex component Rrp42|Methanocella arvoryzae (strain DSM 22066

Query: 1 FPNTPD 6
FP+TPD
Sbjct: 70 FPDTPD 75


>sp|SYFB_ARCFU|PHENYLALANINE--TRNA ligase beta subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FPNTPD 6
FPN PD
Sbjct: 46 FPNRPD 51


>sp|AROD_META3|3-DEHYDROQUINATE dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FPNTPDKED 9
F TP K+D
Sbjct: 118 FEKTPSKQD 126


>sp|SYFB_METLZ|PHENYLALANINE--TRNA ligase beta subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 FPNTPD 6
FPN PD
Sbjct: 46 FPNRPD 51


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PNTPDKED 9
P TP +ED
Sbjct: 411 PGTPQEED 418


>sp|RRP42_ARCFU|EXOSOME complex component Rrp42|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FPNTPDK 7
+P+TPD+
Sbjct: 70 YPDTPDR 76


>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 1 FPNTPD 6
FPN PD
Sbjct: 46 FPNRPD 51


>sp|SYFB_METTH|PHENYLALANINE--TRNA ligase beta subunit|Methanothermobacter thermautotrophicus

Query: 1 FPNTPD 6
FPN PD
Sbjct: 47 FPNRPD 52


>sp|SYFB_METKA|PHENYLALANINE--TRNA ligase beta subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 FPNTPD 6
FPN PD
Sbjct: 51 FPNRPD 56


>sp|SYFB_METMJ|PHENYLALANINE--TRNA ligase beta subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FPNTPD 6
FPN PD
Sbjct: 46 FPNRPD 51




58|SequenceR|295|286|INPFRFPNTP

>sp|GLMS_METJA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanocaldococcus jannaschii

Query: 2 NPFRFPNTP 10
NP +FP TP
Sbjct: 263 NPVKFPKTP 271


>sp|RNH2_METB6|RIBONUCLEASE HII|Methanoregula boonei (strain DSM 21154

Query: 1 INPFRFPNT 9
+NPFR+ T
Sbjct: 105 VNPFRYAET 113


>sp|LYEL_HALVD|LYCOPENE elongase/hydratase|Haloferax volcanii (strain ATCC 29605

Query: 3 PFRFPNTP 10
PFRF TP
Sbjct: 152 PFRFKTTP 159


>sp|IF2P_THEPD|PROBABLE translation initiation factor IF-2|Thermofilum pendens (strain DSM

Query: 6 FPNTP 10
FPNTP
Sbjct: 148 FPNTP 152


>sp|Y215_METJA|UNCHARACTERIZED protein MJ0215|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 INPFRFPNTP 10
+ P FPN P
Sbjct: 25 VRPASFPNFP 34


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PFRFPN 8
PF FPN
Sbjct: 848 PFLFPN 853


>sp|SERC_METBF|PHOSPHOSERINE aminotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 INPFRFPNTP 10
+ P R PN P
Sbjct: 1 MKPTRVPNNP 10


>sp|AROA_METB6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanoregula boonei (strain DSM 21154

Query: 6 FPNTP 10
FPNTP
Sbjct: 79 FPNTP 83


>sp|LADH_METJA|LACTALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 INPFRFP 7
I PF FP
Sbjct: 136 ITPFNFP 142


>sp|LADH_METVS|LACTALDEHYDE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 INPFRFP 7
I PF FP
Sbjct: 136 ITPFNFP 142


>sp|LADH_METM5|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 INPFRFP 7
I PF FP
Sbjct: 136 ITPFNFP 142


>sp|ARCS_METJA|ARCHAEOSINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 INPFRFPNT 9
+ PFR PN+
Sbjct: 42 MTPFRCPNS 50


>sp|LADH_METM7|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 INPFRFP 7
I PF FP
Sbjct: 136 ITPFNFP 142


>sp|LADH_METMP|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 INPFRFP 7
I PF FP
Sbjct: 136 ITPFNFP 142


>sp|KDGA_SULTO|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PFRFPNTP 10
PF FP P
Sbjct: 100 PFYFPRLP 107


>sp|PDAD_METVS|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus vannielii (strain ATCC 35089

Query: 3 PFRFPNT 9
PF+ PNT
Sbjct: 10 PFQAPNT 16


>sp|Y053_NANEQ|UNCHARACTERIZED RNA methyltransferase NEQ053|Nanoarchaeum equitans (strain Kin4-M)

Query: 6 FPNTP 10
FPNTP
Sbjct: 428 FPNTP 432


>sp|PDAD_METM6|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus maripaludis (strain C6 /

Query: 2 NPFRFPNT 9
+PF PNT
Sbjct: 9 SPFEAPNT 16


>sp|LADH_META3|LACTALDEHYDE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 INPFRFP 7
I PF FP
Sbjct: 136 ITPFNFP 142


>sp|PDAD_METM7|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus maripaludis (strain C7 /

Query: 2 NPFRFPNT 9
+PF PNT
Sbjct: 9 SPFEAPNT 16


>sp|PDAD_METMP|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus maripaludis (strain DSM

Query: 2 NPFRFPNT 9
+PF PNT
Sbjct: 9 SPFEAPNT 16


>sp|PDAD_METM5|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus maripaludis (strain C5 /

Query: 2 NPFRFPNT 9
+PF PNT
Sbjct: 9 SPFEAPNT 16


>sp|SYDND_METHJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 INPFRF 6
+NPFRF
Sbjct: 385 LNPFRF 390


>sp|SYDND_METLZ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 INPFRFPNTP 10
+NPFR+ P
Sbjct: 384 LNPFRYGMPP 393


>sp|MTM7_METJA|PUTATIVE type II methyltransferase M.MjaORF1200P|Methanocaldococcus

Query: 1 INPFRFP 7
I PF+FP
Sbjct: 70 IYPFKFP 76




59|SequenceR|300|291|FKEVGINPFR

>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 FKEVGINPFR 10
KEVG+ PF+
Sbjct: 869 LKEVGLTPFK 878


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FKEVGINP 8
FKE+GI+P
Sbjct: 160 FKEIGIDP 167


>sp|SYW_METAC|TRYPTOPHAN--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FKEVGINPF 9
F+E GI+PF
Sbjct: 20 FEEFGISPF 28


>sp|Y1127_METJA|UNCHARACTERIZED protein MJ1127|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KEVGINP 8
KEVG+NP
Sbjct: 176 KEVGLNP 182


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 1 FKEVGINP 8
F EVGI+P
Sbjct: 178 FAEVGIDP 185


>sp|RL30_NANEQ|LARGE ribosomal subunit protein uL30|Nanoarchaeum equitans (strain

Query: 1 FKEVGINPF 9
KE+GI PF
Sbjct: 107 LKELGIKPF 115


>sp|SYW_METMA|TRYPTOPHAN--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FKEVGINPF 9
F+E GI+PF
Sbjct: 20 FEEFGISPF 28


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 1 FKEVGINP 8
F EVGI+P
Sbjct: 176 FAEVGIDP 183


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FKEVGINP 8
F+EVGI+P
Sbjct: 166 FEEVGIDP 173


>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 1 FKEVGINPF 9
++E GI PF
Sbjct: 122 YREAGIEPF 130


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FKEVGINP 8
F+EVGI+P
Sbjct: 163 FEEVGIDP 170


>sp|Y635_METJA|UNCHARACTERIZED protein MJ0635|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FKEVGINP 8
KE+G+NP
Sbjct: 119 LKEIGVNP 126


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 FKEVGINP 8
F+EVGI+P
Sbjct: 163 FEEVGIDP 170


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KEVGINP 8
KE+G+NP
Sbjct: 26 KELGVNP 32


>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 KEVGINP 8
KE+G+NP
Sbjct: 25 KELGVNP 31


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KEVGINP 8
KE+G+NP
Sbjct: 25 KELGVNP 31


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 2 KEVGINP 8
KEVGI+P
Sbjct: 289 KEVGIHP 295


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FKEVGINP 8
F+E+GI+P
Sbjct: 165 FRELGIDP 172


>sp|Y678_METJA|UNCHARACTERIZED protein MJ0678|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FKEVGINPFR 10
F GI+P+R
Sbjct: 279 FSAYGISPYR 288


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 4 VGINPFR 10
VG NPF+
Sbjct: 29 VGTNPFK 35


>sp|ARGB_METMP|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FKEVGINP 8
K VGINP
Sbjct: 50 LKYVGINP 57


>sp|ARGB_METM7|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain C7 /

Query: 1 FKEVGINP 8
K VGINP
Sbjct: 50 LKYVGINP 57


>sp|ARGB_METM6|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 FKEVGINP 8
K VGINP
Sbjct: 50 LKYVGINP 57


>sp|ARGB_METM5|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 FKEVGINP 8
K VGINP
Sbjct: 50 LKYVGINP 57


>sp|ARGB_METVS|ACETYLGLUTAMATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FKEVGINP 8
K VGINP
Sbjct: 50 LKYVGINP 57


>sp|ARGB_METJA|ACETYLGLUTAMATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FKEVGINP 8
K VGINP
Sbjct: 55 LKYVGINP 62


>sp|AROE_METKA|SHIKIMATE dehydrogenase (NADP(+))|Methanopyrus kandleri (strain AV19 /

Query: 1 FKEVGIN 7
FKE+G+N
Sbjct: 34 FKELGLN 40


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FKEVGINP 8
F EVGI P
Sbjct: 167 FAEVGIEP 174


>sp|SYK_METJA|LYSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KEVGINP 8
KE+G+NP
Sbjct: 484 KELGLNP 490


>sp|HDRB2_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit B2|Methanococcus

Query: 1 FKEVGINPFR 10
+KE+G++ R
Sbjct: 127 YKEIGVDKIR 136


>sp|Y864_THEVO|UPF0173 metal-dependent hydrolase TV0864|Thermoplasma volcanium (strain

Query: 1 FKEVGIN 7
FKE GIN
Sbjct: 79 FKESGIN 85


>sp|HDRA2_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus

Query: 2 KEVGINPF 9
+E G+NP+
Sbjct: 87 EEAGLNPY 94


>sp|FLPA_METTH|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanothermobacter

Query: 3 EVGINPF 9
+VG+NP+
Sbjct: 205 QVGLNPY 211


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 FKEVGINPFR 10
F E+G P+R
Sbjct: 611 FNEIGDMPYR 620


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 FKEVGINP 8
F+E+G+ P
Sbjct: 160 FREIGVEP 167


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 FKEVGINP 8
F+E+G+ P
Sbjct: 160 FREIGVEP 167


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 FKEVGINP 8
F+E+G+ P
Sbjct: 160 FREIGVEP 167


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 FKEVGINP 8
F+E+G+ P
Sbjct: 160 FREIGVEP 167


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 FKEVGINP 8
F+E+G+ P
Sbjct: 160 FREIGVEP 167


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 FKEVGINP 8
F+E+G+ P
Sbjct: 160 FREIGVEP 167


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FKEVGINP 8
F+E+G+ P
Sbjct: 160 FREIGVEP 167


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FKEVGINP 8
F++VGI+P
Sbjct: 179 FEKVGISP 186


>sp|OFOB2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Sulfurisphaera tokodaii (strain

Query: 1 FKEVGINP 8
+E+GINP
Sbjct: 28 IRELGINP 35


>sp|ARFB_METVS|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus vannielii (strain ATCC

Query: 2 KEVGINPF 9
K++GIN F
Sbjct: 97 KKIGINKF 104


>sp|ARFB_META3|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus aeolicus (strain ATCC

Query: 2 KEVGINPF 9
K++GIN F
Sbjct: 112 KKIGINKF 119


>sp|SPSS_METJA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FKEVGINP 8
FK++GI P
Sbjct: 296 FKQLGIKP 303


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FKEVGINP 8
F++VGI P
Sbjct: 164 FEQVGIEP 171


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FKEVGINPFR 10
FKE G+N +
Sbjct: 944 FKEYGVNEIK 953


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 FKEVGINP 8
F VG+NP
Sbjct: 345 FATVGVNP 352


>sp|ABLB_METMP|BETA-LYSINE N(6)-acetyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KEVGINP 8
K VG+NP
Sbjct: 109 KTVGVNP 115




60|SequenceR|305|296|SNLELFKEVG

>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NLELFKEVG 10
N ELFKE+G
Sbjct: 156 NPELFKEIG 164


>sp|RL15_THEKO|LARGE ribosomal subunit protein uL15|Thermococcus kodakarensis (strain

Query: 2 NLELFKEVG 10
N ELFK+ G
Sbjct: 84 NFELFKDAG 92


>sp|Y201_METJA|UNCHARACTERIZED protein MJ0201|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NLELFKE 8
NLELFKE
Sbjct: 3 NLELFKE 9


>sp|Y2433_ARCFU|PUTATIVE RNase AF_2433|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SNLELFKEVG 10
SN+E+ KE+G
Sbjct: 64 SNVEMLKELG 73


>sp|UVRB_METMP|UVRABC system protein B|Methanococcus maripaludis (strain DSM 14266

Query: 2 NLELFKEVG 10
N ELFKE+G
Sbjct: 153 NPELFKEMG 161


>sp|SYE_SULAC|GLUTAMATE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SNLELFKEV 9
SNLELF+++
Sbjct: 222 SNLELFEKM 230


>sp|PGP1_SACS2|PHOSPHOGLYCOLATE phosphatase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SNLELFKEVG 10
+++ELF++VG
Sbjct: 175 TDIELFQQVG 184


>sp|Y089_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 SNLELFKEVG 10
NLEL K+VG
Sbjct: 73 DNLELAKKVG 82


>sp|SYE_SACS2|GLUTAMATE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SNLELFKEV 9
SNLELF+++
Sbjct: 229 SNLELFEKM 237


>sp|SURE_METVS|5'-NUCLEOTIDASE SurE|Methanococcus vannielii (strain ATCC 35089

Query: 2 NLELFKEV 9
N+ELF+E+
Sbjct: 252 NIELFQEI 259


>sp|PGP_METS5|PHOSPHOGLYCOLATE phosphatase|Metallosphaera sedula (strain ATCC 51363

Query: 1 SNLELFKEVG 10
+++E+F+E G
Sbjct: 176 TDIEMFREAG 185


>sp|DADD_METAC|5'-DEOXYADENOSINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SNLELFKEV 9
+NL+LF+E+
Sbjct: 305 NNLDLFEEI 313


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 ELFKEVG 10
ELF+EVG
Sbjct: 164 ELFEEVG 170


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 2 NLELFKEVG 10
N E+F EVG
Sbjct: 174 NPEMFAEVG 182


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 ELFKEVG 10
ELF+EVG
Sbjct: 161 ELFEEVG 167


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 4 ELFKEVG 10
ELF+EVG
Sbjct: 161 ELFEEVG 167


>sp|NADM_METLZ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 LELFKEVG 10
++LFKE G
Sbjct: 104 IQLFKEAG 111


>sp|G3P_METFE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermus fervidus

Query: 2 NLELFKEVG 10
NL+++KE G
Sbjct: 94 NLKMYKEKG 102


>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 1 SNLELFKEV 9
+NL+LF+E+
Sbjct: 315 NNLDLFEEM 323


>sp|PMK_SACS2|PHOSPHOMEVALONATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SNLELFKEV 9
SNL+ FKE+
Sbjct: 203 SNLDDFKEI 211


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NLELFKEVG 10
N E+F+E+G
Sbjct: 156 NPEIFREIG 164


>sp|DADD_METMA|5'-DEOXYADENOSINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SNLELFKEV 9
+NL+LF+E+
Sbjct: 305 NNLDLFEEM 313


>sp|DADD_METBF|5'-DEOXYADENOSINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 1 SNLELFKEV 9
+NL+LF+E+
Sbjct: 305 NNLDLFEEM 313




61|SequenceR|310|301|DHNQESNLEL

>sp|Y1656_METJA|UNCHARACTERIZED protein MJ1656|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DHNQESNLEL 10
DH +E N+E+
Sbjct: 49 DHAKELNMEI 58




62|SequenceR|315|306|ALCYDDHNQE

>sp|GLYA_KORCO|SERINE hydroxymethyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 LCYDDHN 8
L +DDHN
Sbjct: 150 LAFDDHN 156


>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 3 CYDDHN 8
CYD HN
Sbjct: 612 CYDYHN 617


>sp|RNZ_METKA|RIBONUCLEASE Z|Methanopyrus kandleri (strain AV19 /

Query: 3 CYDDHNQ 9
C++DH +
Sbjct: 211 CFEDHEE 217


>sp|Y1062_METJA|UNCHARACTERIZED protein MJ1062|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CYDDH 7
CYDD+
Sbjct: 277 CYDDY 281


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LCYDDHNQE 10
LCYD + E
Sbjct: 587 LCYDTYKGE 595


>sp|FRHG_METVO|COENZYME F420 hydrogenase subunit gamma|Methanococcus voltae

Query: 1 ALCYDDHN 8
++C DDH+
Sbjct: 73 SVCLDDHH 80


>sp|Y3513_METJA|MCM-LIKE protein MJECL13|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LCYDDHNQ 9
LC DD N+
Sbjct: 376 LCIDDFNE 383


>sp|CSG_METVO|S-LAYER protein|Methanococcus voltae

Query: 1 ALCYDDHNQE 10
++ YDD N++
Sbjct: 224 SIAYDDDNED 233




63|SequenceR|320|311|DTFVYALCYD

>sp|RNH2_THEAC|RIBONUCLEASE HII|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DTFVYALCYD 10
D VY CYD
Sbjct: 98 DDLVYIDCYD 107


>sp|RS24_NANEQ|SMALL ribosomal subunit protein eS24|Nanoarchaeum equitans (strain

Query: 2 TFVYALCYD 10
+F+YA YD
Sbjct: 66 SFIYARVYD 74


>sp|SYP_METMP|PROLINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 FVYALCY 9
FVY CY
Sbjct: 244 FVYQTCY 250


>sp|Y1365_METJA|UNCHARACTERIZED protein MJ1365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FVYALCY 9
F+Y +CY
Sbjct: 268 FLYMICY 274


>sp|SYP_METM7|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 FVYALCY 9
FVY CY
Sbjct: 244 FVYQTCY 250


>sp|SYP_METM5|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 FVYALCY 9
FVY CY
Sbjct: 244 FVYQTCY 250


>sp|SYP_METM6|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 FVYALCY 9
FVY CY
Sbjct: 244 FVYQTCY 250


>sp|SYFB_THESM|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus sibiricus (strain DSM 12597

Query: 1 DTFVYALC 8
D F+YA C
Sbjct: 26 DLFLYAKC 33


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 1 DTFVYALC 8
D F+YA C
Sbjct: 26 DLFLYAKC 33


>sp|SYFB_THEKO|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 DTFVYALC 8
D F+YA C
Sbjct: 26 DLFLYAKC 33


>sp|SYFB_THEGJ|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DTFVYALC 8
D F+YA C
Sbjct: 26 DLFLYAKC 33


>sp|SYE_KORCO|GLUTAMATE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 FVYALCYD 10
F+YA YD
Sbjct: 117 FIYARLYD 124




64|SequenceR|325|316|DDFDRDTFVY

>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 1 DDFDRDTF 8
D+F RDTF
Sbjct: 479 DEFGRDTF 486


>sp|PUR2_METS3|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DDFDRDTFV 9
DDFDRD V
Sbjct: 134 DDFDRDVVV 142


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DFDRDTFV 9
+FDRDTF+
Sbjct: 410 EFDRDTFL 417


>sp|SYN_PYRFU|ASPARAGINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DDFDRDTFVY 10
++FDR FVY
Sbjct: 314 EEFDRPFFVY 323


>sp|SYN_PYRHO|ASPARAGINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DDFDRDTFVY 10
++FDR FVY
Sbjct: 314 EEFDRPFFVY 323


>sp|TRM1_METMP|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 DDFDRDTFV 9
DDF RD F+
Sbjct: 47 DDFKRDEFL 55


>sp|TRM1_METMI|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 DDFDRDTFV 9
DDF RD F+
Sbjct: 47 DDFKRDEFL 55


>sp|TRPB_METLZ|TRYPTOPHAN synthase beta chain|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DDFDRDTFV 9
D FDRD V
Sbjct: 361 DSFDRDDIV 369


>sp|FAU1_HALSA|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 700922

Query: 2 DFDRDTFVY 10
D RDTFV+
Sbjct: 78 DLPRDTFVW 86


>sp|FAU1_HALS3|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 29341

Query: 2 DFDRDTFVY 10
D RDTFV+
Sbjct: 78 DLPRDTFVW 86


>sp|SYN_PYRAB|ASPARAGINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 DFDRDTFVY 10
+FDR FVY
Sbjct: 315 EFDRPFFVY 323


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 DDFDRDTFV 9
+DF+RD+ +
Sbjct: 396 NDFERDSLI 404


>sp|MTTB_METBU|TRIMETHYLAMINE methyltransferase MttB|Methanococcoides burtonii (strain DSM 6242

Query: 1 DDFDRDTF 8
D FDRD F
Sbjct: 436 DIFDRDMF 443


>sp|Y1295_ARCFU|UNCHARACTERIZED protein AF_1295|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DDFDRDTF 8
+DF RD F
Sbjct: 55 EDFSRDPF 62


>sp|PYRB_HYPBU|ASPARTATE carbamoyltransferase catalytic subunit|Hyperthermus butylicus

Query: 2 DFDRDTF 8
DFDRD+
Sbjct: 17 DFDRDSL 23


>sp|GGGPS_THEVO|GERANYLGERANYLGLYCERYL phosphate synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DDFDRDT 7
D FDR+T
Sbjct: 147 DSFDRET 153


>sp|TRM1_METM6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 DDFDRDTFV 9
D+F+RD F+
Sbjct: 47 DNFNRDEFL 55


>sp|Y632_METJA|UNCHARACTERIZED ATP-binding protein MJ0632|Methanocaldococcus jannaschii (strain

Query: 1 DDFDRDT 7
DDFDR+T
Sbjct: 221 DDFDRET 227


>sp|MOAA_METAR|PROBABLE GTP 3',8-cyclase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DDFDRDTFVY 10
D DRD F +
Sbjct: 115 DSMDRDRFTF 124


>sp|CCA_METJA|CCA-ADDING enzyme|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DDFDRDTFV 9
DD+D D FV
Sbjct: 66 DDYDIDIFV 74


>sp|RF1_METVS|PEPTIDE chain release factor subunit|Methanococcus vannielii (strain ATCC

Query: 1 DDFDRDTFVY 10
+DF +DT VY
Sbjct: 133 EDFIQDTEVY 142


>sp|PGP_SULAC|PHOSPHOGLYCOLATE phosphatase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 FDRDTF 8
FDRDT+
Sbjct: 15 FDRDTY 20


>sp|RF1_METM7|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C7 /

Query: 1 DDFDRDTFVY 10
+DF +DT VY
Sbjct: 133 EDFIQDTEVY 142


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 DDFDRD 6
DDFD D
Sbjct: 207 DDFDHD 212




65|SequenceR|330|321|LGLVGDDFDR

>sp|NIFD_METMP|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 2 GLVGDDFD 9
GL+GDD D
Sbjct: 152 GLIGDDLD 159


>sp|NIFD_METMI|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 2 GLVGDDFD 9
GL+GDD D
Sbjct: 152 GLIGDDLD 159


>sp|NIFD_METTM|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 2 GLVGDDFD 9
GL+GDD D
Sbjct: 150 GLIGDDID 157


>sp|DNAG_THEON|DNA primase DnaG|Thermococcus onnurineus (strain NA1)

Query: 2 GLVGDDFD 9
GL+GDD D
Sbjct: 65 GLLGDDLD 72


>sp|DNAG_THEKO|DNA primase DnaG|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GLVGDDFD 9
GL+GDD D
Sbjct: 63 GLLGDDLD 70


>sp|DNAG_THEGJ|DNA primase DnaG|Thermococcus gammatolerans (strain DSM 15229

Query: 2 GLVGDDFD 9
GL+GDD D
Sbjct: 64 GLLGDDLD 71


>sp|DNAG_PYRHO|DNA primase DnaG|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GLVGDDFD 9
GL+GDD D
Sbjct: 65 GLLGDDLD 72


>sp|DNAG_PYRFU|DNA primase DnaG|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GLVGDDFD 9
GL+GDD D
Sbjct: 65 GLLGDDLD 72


>sp|DNAG_PYRAB|DNA primase DnaG|Pyrococcus abyssi (strain GE5 /

Query: 2 GLVGDDFD 9
GL+GDD D
Sbjct: 65 GLLGDDLD 72


>sp|NIFD_METBA|NITROGENASE molybdenum-iron protein alpha chain|Methanosarcina barkeri

Query: 1 LGLVGDDFD 9
+GL+GDD +
Sbjct: 155 VGLIGDDIE 163


>sp|SYH_HALMA|HISTIDINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LGLVGDDFD 9
LGL G+DF+
Sbjct: 149 LGLTGEDFE 157


>sp|NIFD_METTH|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 2 GLVGDDFD 9
GL+GDD +
Sbjct: 150 GLIGDDIE 157


>sp|DNAG_SULAC|DNA primase DnaG|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 LVGDDFD 9
L GDDFD
Sbjct: 31 LFGDDFD 37


>sp|DNAG_METKA|DNA primase DnaG|Methanopyrus kandleri (strain AV19 /

Query: 2 GLVGDDFD 9
GL+GDD D
Sbjct: 42 GLLGDDLD 49


>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 1 LGLVGDDF 8
+GL+GDD
Sbjct: 162 VGLIGDDL 169


>sp|HIS1_METAR|ATP phosphoribosyltransferase|Methanocella arvoryzae (strain DSM

Query: 1 LGLVGDDF 8
LG+ G+DF
Sbjct: 65 LGITGEDF 72


>sp|NIFE_METMI|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 1 LGLVGDDF 8
+GL+GDD
Sbjct: 162 VGLIGDDL 169


>sp|HMGCS_PYRHO|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LGLVGDDFD 9
LGL +DFD
Sbjct: 226 LGLTPEDFD 234


>sp|DNAK_METTE|CHAPERONE protein DnaK|Methanosarcina thermophila

Query: 3 LVGDDFDR 10
L GDDFD+
Sbjct: 200 LGGDDFDQ 207


>sp|NIFE_METBA|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanosarcina

Query: 1 LGLVGDDFD 9
+G++GDD +
Sbjct: 134 VGIIGDDLE 142


>sp|AKSA_METJA|HOMOCITRATE synthase AksA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGLVGDDFDR 10
L L+G D+DR
Sbjct: 358 LKLMGIDYDR 367


>sp|DNAK_METBU|CHAPERONE protein DnaK|Methanococcoides burtonii (strain DSM 6242

Query: 3 LVGDDFDR 10
L GDDFD+
Sbjct: 200 LGGDDFDQ 207


>sp|HMGCS_THEGJ|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LGLVGDDFD 9
LGL +DFD
Sbjct: 226 LGLTVNDFD 234


>sp|DNAK_METAC|CHAPERONE protein DnaK|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LVGDDFDR 10
L GDDFD+
Sbjct: 200 LGGDDFDQ 207


>sp|PSB1_THEPD|PROTEASOME subunit beta 1|Thermofilum pendens (strain DSM 2475

Query: 1 LGLVGDDF 8
+GLVG DF
Sbjct: 16 VGLVGKDF 23


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 VGDDFDR 10
VGD++DR
Sbjct: 162 VGDNYDR 168


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 4 VGDDFD 9
VGDDF+
Sbjct: 300 VGDDFE 305


>sp|DNAG_PICTO|DNA primase DnaG|Picrophilus torridus (strain ATCC 700027

Query: 2 GLVGDDFD 9
GL+GD+ D
Sbjct: 37 GLLGDELD 44


>sp|DNAG_METJA|DNA primase DnaG|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GLVGDDFD 9
GL+GD+ D
Sbjct: 38 GLLGDELD 45


>sp|HMGCS_THEON|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus onnurineus (strain NA1)

Query: 1 LGLVGDDFD 9
LGL +DFD
Sbjct: 226 LGLTVNDFD 234


>sp|SYH_HALLT|HISTIDINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 LGLVGDDFD 9
LGL DDF+
Sbjct: 149 LGLTNDDFE 157


>sp|LYSK_AERPE|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Aeropyrum pernix (strain

Query: 1 LGLVGDDFD 9
LGLVG++ D
Sbjct: 123 LGLVGEEGD 131


>sp|DNAK_METMZ|CHAPERONE protein DnaK|Methanosarcina mazei (Methanosarcina frisia)

Query: 3 LVGDDFDR 10
L GDDFD+
Sbjct: 200 LGGDDFDQ 207


>sp|DNAK_METMA|CHAPERONE protein DnaK|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LVGDDFDR 10
L GDDFD+
Sbjct: 200 LGGDDFDQ 207


>sp|DADD_METKA|5'-DEOXYADENOSINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 LGLVGDD 7
+GL+GDD
Sbjct: 238 IGLLGDD 244


>sp|DNAK_METBF|CHAPERONE protein DnaK|Methanosarcina barkeri (strain Fusaro /

Query: 3 LVGDDFDR 10
L GDDFD+
Sbjct: 200 LGGDDFDQ 207


>sp|SYH_HALSA|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LGLVGDDFD 9
LGL G DF+
Sbjct: 149 LGLTGADFE 157


>sp|SYH_HALS3|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LGLVGDDFD 9
LGL G DF+
Sbjct: 149 LGLTGADFE 157


>sp|Y095_METJA|UNCHARACTERIZED protein MJ0095|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VGDDFD 9
VGD+FD
Sbjct: 63 VGDEFD 68


>sp|SPSS_METBF|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LGLVGDDFD 9
LG+V D F+
Sbjct: 369 LGIVADSFE 377


>sp|GYRB_HALVD|DNA gyrase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 2 GLVGDDFD 9
G VGD+FD
Sbjct: 481 GGVGDEFD 488


>sp|GYRB_HALL2|DNA gyrase subunit B|Haloferax lucentense (strain DSM 14919

Query: 2 GLVGDDFD 9
G VGD+FD
Sbjct: 481 GGVGDEFD 488




66|SequenceR|335|326|AGVWALGLVG

>sp|SYFA_SULTO|PHENYLALANINE--TRNA ligase alpha subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AGVWALGL 8
AG W LG+
Sbjct: 427 AGAWGLGI 434


>sp|YA00_PYRHO|PUTATIVE transport protein PH1000|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AGVWALGLVG 10
G W LGL G
Sbjct: 318 GGTWGLGLKG 327




67|SequenceR|340|331|SSGSPAGVWA

>sp|SYFA_METS5|PHENYLALANINE--TRNA ligase alpha subunit|Metallosphaera sedula (strain ATCC 51363

Query: 4 SPAGVWA 10
SPAG W
Sbjct: 426 SPAGAWG 432


>sp|Y2225_ARCFU|UNCHARACTERIZED protein AF_2225|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SSGSPAGV 8
++G+PAGV
Sbjct: 209 ATGTPAGV 216


>sp|GLMM_METVS|PHOSPHOGLUCOSAMINE mutase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GSPAGVW 9
G P+G W
Sbjct: 313 GEPSGTW 319


>sp|GLMM_METMP|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GSPAGVW 9
G P+G W
Sbjct: 313 GEPSGTW 319


>sp|GLMM_METM7|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C7 /

Query: 3 GSPAGVW 9
G P+G W
Sbjct: 313 GEPSGTW 319


>sp|GLMM_METM5|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C5 /

Query: 3 GSPAGVW 9
G P+G W
Sbjct: 313 GEPSGTW 319


>sp|GLMM_METJA|PHOSPHOGLUCOSAMINE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GSPAGVW 9
G P+G W
Sbjct: 314 GEPSGTW 320


>sp|GLMM_META3|PHOSPHOGLUCOSAMINE mutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GSPAGVW 9
G P+G W
Sbjct: 317 GEPSGTW 323


>sp|HACA_METTH|PROBABLE methanogen homoaconitase large subunit|Methanothermobacter

Query: 1 SSGSPAGVW 9
S G PA VW
Sbjct: 52 SRGGPARVW 60


>sp|GLMM_METST|PROBABLE phosphoglucosamine mutase|Methanosphaera stadtmanae (strain ATCC

Query: 3 GSPAGVW 9
G P+G W
Sbjct: 319 GEPSGTW 325


>sp|AROA_THEAC|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 4 SPAGVW 9
+P+GVW
Sbjct: 210 NPSGVW 215


>sp|GLMM_PYRHO|PROBABLE phosphoglucosamine mutase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GSPAGVW 9
G P+G W
Sbjct: 315 GEPSGTW 321


>sp|GSA_METBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcoides burtonii (strain DSM 6242

Query: 2 SGSPAGVWA 10
SGSPA V A
Sbjct: 299 SGSPASVAA 307


>sp|GLMM_PYRFU|PROBABLE phosphoglucosamine mutase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GSPAGVW 9
G P+G W
Sbjct: 315 GEPSGTW 321


>sp|GLMM_METS3|PROBABLE phosphoglucosamine mutase|Methanobrevibacter smithii (strain ATCC

Query: 3 GSPAGVW 9
G P+G W
Sbjct: 312 GEPSGTW 318


>sp|GLMM_PYRAB|PROBABLE phosphoglucosamine mutase|Pyrococcus abyssi (strain GE5 /

Query: 3 GSPAGVW 9
G P+G W
Sbjct: 315 GEPSGTW 321


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 3 GSPAGVW 9
G P+G W
Sbjct: 315 GEPSGTW 321


>sp|TRUA_PYRIL|TRNA pseudouridine synthase A|Pyrobaculum islandicum (strain DSM 4184

Query: 1 SSGSPAGVWA 10
+S P GVWA
Sbjct: 65 NSKLPRGVWA 74


>sp|VORB_PYRAB|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus abyssi (strain GE5 /

Query: 1 SSGSPAGVW 9
SS +P G W
Sbjct: 150 SSSTPYGAW 158


>sp|TRUA_PYRAR|TRNA pseudouridine synthase A|Pyrobaculum arsenaticum (strain DSM

Query: 1 SSGSPAGVWA 10
+S P GVWA
Sbjct: 65 NSKLPRGVWA 74


>sp|VORB_PYRFU|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SSGSPAGVW 9
SS +P G W
Sbjct: 150 SSSTPYGAW 158


>sp|GLMM_THEGJ|PROBABLE phosphoglucosamine mutase|Thermococcus gammatolerans (strain DSM

Query: 3 GSPAGVW 9
G P+G W
Sbjct: 315 GEPSGTW 321


>sp|NPD_HALMA|NAD-DEPENDENT protein deacetylase|Haloarcula marismortui (strain ATCC 43049

Query: 2 SGSPAGVWA 10
PAG WA
Sbjct: 67 DADPAGFWA 75




68|SequenceR|345|336|ECIGGSSGSP

>sp|Y2165_ARCFU|UNCHARACTERIZED protein AF_2165|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ECIGGSSGS 9
EC+ G+SGS
Sbjct: 176 ECVIGASGS 184


>sp|Y1337_METJA|UNCHARACTERIZED protein MJ1337|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ECIGGS 6
ECIGG+
Sbjct: 166 ECIGGT 171


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 IGGSSGS 9
+GGS+GS
Sbjct: 550 VGGSTGS 556


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 IGGSSGS 9
+GGS+GS
Sbjct: 550 VGGSTGS 556


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 IGGSSGS 9
+GGS+GS
Sbjct: 550 VGGSTGS 556


>sp|SYFA_METAR|PHENYLALANINE--TRNA ligase alpha subunit|Methanocella arvoryzae (strain DSM 22066

Query: 4 GGSSGS 9
GGSSGS
Sbjct: 307 GGSSGS 312


>sp|REP75_PYRAB|REPLICATION initiator protein|Pyrococcus abyssi (strain GE5 /

Query: 4 GGSSGS 9
GGSSGS
Sbjct: 45 GGSSGS 50


>sp|TRPB_META3|TRYPTOPHAN synthase beta chain|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 CIGGSSGS 9
C+GG S S
Sbjct: 227 CVGGGSNS 234


>sp|FNO_METTH|F420-DEPENDENT NADP reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 CIGGSS 7
CIGGS+
Sbjct: 111 CIGGSA 116


>sp|TRM1_METS5|TRNA (guanine(26)-N(2))-dimethyltransferase|Metallosphaera sedula

Query: 1 ECIGGSSGS 9
EC+ GSS +
Sbjct: 368 ECVKGSSAT 376




69|SequenceR|350|341|YLKSKECIGG

>sp|Y1337_METJA|UNCHARACTERIZED protein MJ1337|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LKSKECIGG 10
+K+ ECIGG
Sbjct: 162 IKAMECIGG 170


>sp|RL7A_METS3|LARGE ribosomal subunit protein eL8|Methanobrevibacter smithii (strain

Query: 1 YLKSKECIGG 10
YL +KE +GG
Sbjct: 79 YLPTKEQVGG 88


>sp|SYFA_PYRAR|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 YLKSKECIGG 10
+LKS C GG
Sbjct: 77 FLKSATCDGG 86


>sp|AATE_HALMA|A-TYPE ATP synthase subunit E|Haloarcula marismortui (strain ATCC 43049

Query: 1 YLKSKECIGG 10
Y ++C+GG
Sbjct: 146 YAGERDCLGG 155


>sp|AATE_THEGJ|A-TYPE ATP synthase subunit E|Thermococcus gammatolerans (strain DSM 15229

Query: 6 ECIGG 10
ECIGG
Sbjct: 156 ECIGG 160


>sp|PRIS_CENSY|DNA primase small subunit PriS|Cenarchaeum symbiosum (strain A)

Query: 5 KECIGG 10
K+CIGG
Sbjct: 142 KDCIGG 147


>sp|CS3HE_THETK|CRISPR-ASSOCIATED helicase Cas3|Thermoproteus tenax (strain ATCC 35583

Query: 1 YLKSKECIGG 10
+LK C+GG
Sbjct: 220 FLKHIPCLGG 229


>sp|CBIA_METST|COBYRINATE a,c-diamide synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 YLKSKECI 8
YLK+KE +
Sbjct: 159 YLKTKEAV 166


>sp|TIAS_THESM|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus sibiricus (strain

Query: 1 YLKSKEC 7
YLK K+C
Sbjct: 370 YLKCKKC 376


>sp|FAU1_IGNH4|PROBABLE ribonuclease FAU-1|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LKSKECIGG 10
+K+KEC G
Sbjct: 116 VKAKECYDG 124


>sp|COFC_METJA|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YLKSKECI 8
YLKSK+ I
Sbjct: 138 YLKSKDLI 145




70|SequenceR|355|346|KKGDSYLKSK

>sp|IF6_METST|TRANSLATION initiation factor 6|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 DSYLKS 9
DSYLKS
Sbjct: 32 DSYLKS 37


>sp|Y201_METJA|UNCHARACTERIZED protein MJ0201|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KKGDSYLK 8
KKG YLK
Sbjct: 92 KKGSHYLK 99


>sp|MOAA_SACS2|PROBABLE GTP 3',8-cyclase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KKGDSYLKSK 10
++GD+YL SK
Sbjct: 32 EEGDNYLLSK 41


>sp|HPRT_METMA|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KGDSYLK 8
+GD YLK
Sbjct: 153 RGDGYLK 159


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 KKGDSYLKSK 10
+KG+ YL +K
Sbjct: 452 RKGNQYLNTK 461




71|SequenceR|360|351|TNLSKKKGDS

>sp|CDC62_SULTO|ORC1-TYPE DNA replication protein 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NLSKKKGD 9
NL KK+GD
Sbjct: 325 NLHKKEGD 332


>sp|NADB_SACS2|L-ASPARTATE oxidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NLSKKKG 8
NL+KKKG
Sbjct: 127 NLAKKKG 133


>sp|NUCS_SULAC|ENDONUCLEASE NucS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 NLSKKKGDS 10
N+S K GDS
Sbjct: 227 NISDKLGDS 235




72|SequenceR|365|356|VTIIGTNLSK

>sp|ARLY_META3|ARGININOSUCCINATE lyase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VTIIGTNLSK 10
++I+GTNLSK
Sbjct: 247 LSILGTNLSK 256


>sp|ARLY_METVS|ARGININOSUCCINATE lyase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VTIIGTNLSK 10
++++GTNLSK
Sbjct: 242 ISMLGTNLSK 251


>sp|ARLY_METM6|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C6 /

Query: 1 VTIIGTNLSK 10
++++GTNLSK
Sbjct: 242 ISMLGTNLSK 251


>sp|ARLY_METM5|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C5 /

Query: 1 VTIIGTNLSK 10
++++GTNLSK
Sbjct: 242 ISMLGTNLSK 251


>sp|ARLY_METMP|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VTIIGTNLSK 10
++++GTNLSK
Sbjct: 242 ISMLGTNLSK 251


>sp|ARLY_METM7|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C7 /

Query: 1 VTIIGTNLSK 10
++++GTNLSK
Sbjct: 242 ISMLGTNLSK 251


>sp|Y1033_METBU|UPF0179 protein Mbur_1033|Methanococcoides burtonii (strain DSM 6242

Query: 1 VTIIGTNLSK 10
+T+IGT L+K
Sbjct: 8 ITLIGTRLAK 17


>sp|ARLY_METJA|ARGININOSUCCINATE lyase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VTIIGTNLSK 10
+ I+GTNLSK
Sbjct: 242 LAILGTNLSK 251


>sp|Y851_PICTO|UPF0179 protein PTO0851|Picrophilus torridus (strain ATCC 700027

Query: 1 VTIIGTNLSK 10
+T+IGT+L+K
Sbjct: 4 ITLIGTDLAK 13


>sp|PCNA_HALWD|DNA polymerase sliding clamp|Haloquadratum walsbyi (strain DSM 16790

Query: 3 IIGTNLSK 10
+IG NLSK
Sbjct: 65 VIGVNLSK 72


>sp|Y996_METST|UPF0179 protein Msp_0996|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VTIIGTNLSK 10
+T+IGT+L+K
Sbjct: 2 ITLIGTSLAK 11


>sp|AMTAB_PYRHO|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 4 IGTNLSK 10
IGTNL+K
Sbjct: 201 IGTNLAK 207


>sp|AMTAB_PYRAB|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 4 IGTNLSK 10
IGTNL+K
Sbjct: 201 IGTNLAK 207


>sp|Y2319_HALLT|UPF0179 protein Hlac_2319|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 VTIIGTNLS 9
VT+IGT L+
Sbjct: 4 VTLIGTRLA 12


>sp|SYFB_SULTO|PHENYLALANINE--TRNA ligase beta subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 IIGTNLSK 10
I+GTNL+K
Sbjct: 283 ILGTNLNK 290


>sp|Y1064_HALMA|UPF0179 protein rrnAC1064|Haloarcula marismortui (strain ATCC 43049

Query: 1 VTIIGTNLSK 10
VT++GT L++
Sbjct: 4 VTLVGTRLAE 13


>sp|LYSY_PICTO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 TIIGTNLS 9
T+IGTN +
Sbjct: 286 TVIGTNFA 293


>sp|Y220_METTP|UPF0179 protein Mthe_0220|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VTIIGTNLS 9
+T+IGT L+
Sbjct: 8 ITLIGTKLA 16


>sp|Y1959_METB6|UPF0179 protein Mboo_1959|Methanoregula boonei (strain DSM 21154

Query: 1 VTIIGTNLSK 10
VT++GT L+K
Sbjct: 8 VTLVGTVLAK 17




73|SequenceR|370|361|SGYNQVTIIG

>sp|TRPE2_HALMA|ANTHRANILATE synthase component 1 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 GYNQVTIIG 10
GY+ +TI+G
Sbjct: 305 GYDDLTIVG 313


>sp|PIMT_IGNH4|PROTEIN-L-ISOASPARTATE O-methyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GYNQVTII 9
GYN VT++
Sbjct: 124 GYNNVTVL 131


>sp|SYH_SULAC|HISTIDINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GYNQVTIIG 10
GYN + +IG
Sbjct: 384 GYNAIVLIG 392


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 SGYNQVTIIG 10
SG +VTIIG
Sbjct: 262 SGDEEVTIIG 271


>sp|MTXX_METAC|PUTATIVE methyltransferase mtx subunit X|Methanosarcina acetivorans

Query: 2 GYNQVTIIG 10
GY QV ++G
Sbjct: 41 GYAQVVLVG 49


>sp|Y1185_METJA|UNCHARACTERIZED protein MJ1185|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SGYNQVTIIG 10
+G N V IIG
Sbjct: 89 TGLNNVAIIG 98


>sp|MTXX_METMA|PUTATIVE methyltransferase mtx subunit X|Methanosarcina mazei (strain ATCC

Query: 2 GYNQVTIIG 10
GY QV ++G
Sbjct: 41 GYAQVVLVG 49


>sp|MTXX_METBF|PUTATIVE methyltransferase mtx subunit X|Methanosarcina barkeri (strain

Query: 2 GYNQVTIIG 10
GY QV ++G
Sbjct: 32 GYAQVVLVG 40


>sp|REG7_PYRHO|HTH-TYPE transcriptional regulator LrpA|Pyrococcus horikoshii (strain ATCC

Query: 2 GYNQVTIIG 10
GY+ VTI G
Sbjct: 61 GYSLVTITG 69


>sp|REG7_PYRFU|HTH-TYPE transcriptional regulator LrpA|Pyrococcus furiosus (strain ATCC

Query: 2 GYNQVTIIG 10
GY+ VTI G
Sbjct: 61 GYSLVTITG 69


>sp|REG7_PYRAB|HTH-TYPE transcriptional regulator LrpA|Pyrococcus abyssi (strain GE5 /

Query: 2 GYNQVTIIG 10
GY+ VTI G
Sbjct: 61 GYSLVTITG 69




74|SequenceR|375|366|KPPVHSGYNQ

>sp|Y916_METJA|UNCHARACTERIZED protein MJ0916|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KPPVHSGY 8
KPP SGY
Sbjct: 77 KPPADSGY 84


>sp|CDPAS_PICTO|CDP-ARCHAEOL synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 PPVHSGYN 9
PP+H G N
Sbjct: 164 PPLHRGVN 171


>sp|SDO1_AERPE|RIBOSOME maturation protein SDO1 homolog|Aeropyrum pernix (strain ATCC

Query: 2 PPVHSG 7
PP HSG
Sbjct: 171 PPPHSG 176


>sp|FEN_METLZ|FLAP endonuclease 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 PPVHSGYN 9
PPV YN
Sbjct: 280 PPVERSYN 287


>sp|MOBA_THESM|PROBABLE molybdenum cofactor guanylyltransferase|Thermococcus sibiricus

Query: 3 PVHSGYNQ 10
P+H+ Y+Q
Sbjct: 128 PLHAAYSQ 135


>sp|TRPB2_ARCFU|TRYPTOPHAN synthase beta chain 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PPVHSG 7
PP+H+G
Sbjct: 332 PPIHAG 337


>sp|TRPB2_PYRAB|TRYPTOPHAN synthase beta chain 2|Pyrococcus abyssi (strain GE5 /

Query: 2 PPVHSG 7
PP+H+G
Sbjct: 328 PPIHAG 333


>sp|SYS_DESA1|SERINE--TRNA ligase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 KPPVHSGY 8
KP V SGY
Sbjct: 129 KPKVWSGY 136


>sp|TRPB_THEON|TRYPTOPHAN synthase beta chain|Thermococcus onnurineus (strain NA1)

Query: 2 PPVHSG 7
PP+H+G
Sbjct: 328 PPIHAG 333


>sp|TRPB_PYRHO|TRYPTOPHAN synthase beta chain|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PPVHSG 7
PP+H+G
Sbjct: 339 PPIHAG 344


>sp|SPSS_METAC|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KPPVH 5
KPP+H
Sbjct: 63 KPPIH 67


>sp|SPSS_METMA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KPPVH 5
KPP+H
Sbjct: 63 KPPIH 67




75|SequenceR|380|371|TIHSVKPPVH

>sp|AROE_HALSA|SHIKIMATE dehydrogenase (NADP(+))|Halobacterium salinarum (strain ATCC

Query: 3 HSVKPPVH 10
HS+ PP+H
Sbjct: 13 HSLSPPLH 20


>sp|AROE_HALS3|SHIKIMATE dehydrogenase (NADP(+))|Halobacterium salinarum (strain ATCC

Query: 3 HSVKPPVH 10
HS+ PP+H
Sbjct: 13 HSLSPPLH 20


>sp|AROE_NATPD|SHIKIMATE dehydrogenase (NADP(+))|Natronomonas pharaonis (strain ATCC 35678

Query: 3 HSVKPPVH 10
HSV PP+H
Sbjct: 13 HSVSPPMH 20


>sp|Y2601_AERPE|UNCHARACTERIZED protein APE_2601.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 IHSVKPP 8
IH VKPP
Sbjct: 115 IHPVKPP 121


>sp|AROE_HALMA|SHIKIMATE dehydrogenase (NADP(+))|Haloarcula marismortui (strain ATCC 43049

Query: 3 HSVKPPVH 10
HS+ PP+H
Sbjct: 13 HSLSPPMH 20


>sp|AROE_HALLT|SHIKIMATE dehydrogenase (NADP(+))|Halorubrum lacusprofundi (strain ATCC

Query: 3 HSVKPPVH 10
HS+ PP+H
Sbjct: 13 HSLSPPMH 20


>sp|AROE_HALWD|SHIKIMATE dehydrogenase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 3 HSVKPPVH 10
HS+ PP+H
Sbjct: 13 HSLSPPMH 20


>sp|MOAA_THEKO|PROBABLE GTP 3',8-cyclase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 TIHSVKPPVH 10
++HS+KP V+
Sbjct: 115 SLHSLKPEVY 124


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 2 IHSVKPPVH 10
+ +KPPVH
Sbjct: 593 LREMKPPVH 601


>sp|Y964_METJA|UNCHARACTERIZED protein MJ0964|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IHSVKPPVH 10
+HS K P+H
Sbjct: 164 LHSYKNPIH 172


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 5 VKPPVH 10
+KPPVH
Sbjct: 586 MKPPVH 591


>sp|GLCD2_SACS2|GLUCOSE 1-dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 SVKPPV 9
SVKPP+
Sbjct: 54 SVKPPI 59


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 2 IHSVKPPVH 10
+H V P+H
Sbjct: 373 VHHVPSPIH 381


>sp|CHEB1_METHJ|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanospirillum

Query: 2 IHSVKPPV 9
+H+VKP V
Sbjct: 249 VHNVKPAV 256


>sp|AROE_METS3|SHIKIMATE dehydrogenase (NADP(+))|Methanobrevibacter smithii (strain ATCC

Query: 3 HSVKPPVH 10
HS PP+H
Sbjct: 18 HSFSPPMH 25


>sp|AROE_METST|SHIKIMATE dehydrogenase (NADP(+))|Methanosphaera stadtmanae (strain ATCC

Query: 3 HSVKPPVH 10
HS PP+H
Sbjct: 18 HSFSPPMH 25


>sp|RNZ_PYRNV|RIBONUCLEASE Z|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 SVKPPVH 10
SVKPP H
Sbjct: 267 SVKPPPH 273


>sp|KPRS_METKA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanopyrus kandleri (strain AV19 /

Query: 2 IHSVKPP 8
+HS+ PP
Sbjct: 52 VHSMSPP 58




76|SequenceR|385|376|VEHAFTIHSV

>sp|LYSY_THEKO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 VEHAFTIHSV 10
V+ AFT+HSV
Sbjct: 209 VKAAFTVHSV 218


>sp|HIS5_HALMA|IMIDAZOLE glycerol phosphate synthase subunit|Haloarcula marismortui (strain

Query: 2 EHAFTIHS 9
EHA+ +HS
Sbjct: 165 EHAYFVHS 172


>sp|TRPD_HALLT|ANTHRANILATE phosphoribosyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 1 VEHAFTIH 8
VEHA +H
Sbjct: 212 VEHALVVH 219


>sp|Y325_METJA|UNCHARACTERIZED protein MJ0325|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VEHAFTIHSV 10
++H FT+ SV
Sbjct: 147 IDHYFTVRSV 156


>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 HAFTIH 8
HAF++H
Sbjct: 522 HAFSVH 527


>sp|LYSY_PYRFU|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 VEHAFTIHSV 10
V+ FT+HSV
Sbjct: 209 VKAMFTVHSV 218


>sp|LYSY_PYRAB|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 VEHAFTIHSV 10
V+ FT+HSV
Sbjct: 209 VKAMFTVHSV 218


>sp|LYSY_PYRHO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 VEHAFTIHSV 10
V FT+HSV
Sbjct: 209 VRAMFTVHSV 218


>sp|AMPPA_METJA|AMP phosphorylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HAFTIHSV 10
H F +HS+
Sbjct: 159 HIFDVHSI 166




77|SequenceR|390|381|GFNHGVEHAF

>sp|ALF1_AERPE|PROBABLE fructose-bisphosphate aldolase class 1|Aeropyrum pernix (strain

Query: 1 GFNHGVEHA 9
F+HG+EH
Sbjct: 26 AFDHGIEHG 34


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GFNHGVEHAF 10
GF GVEHA
Sbjct: 439 GFMWGVEHAL 448


>sp|ALF1_THETK|FRUCTOSE-BISPHOSPHATE aldolase class 1|Thermoproteus tenax (strain ATCC 35583

Query: 1 GFNHGVEHA 9
++HG+EH
Sbjct: 22 AYDHGIEHG 30


>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GFNHGVEHAF 10
GF V+HA+
Sbjct: 377 GFGQAVQHAY 386


>sp|MALE_PYRAB|MALTOTRIOSE-BINDING protein|Pyrococcus abyssi (strain GE5 /

Query: 1 GFNHGVEHAF 10
GF V+HA+
Sbjct: 396 GFGQAVQHAY 405


>sp|PYRF_AERPE|OROTIDINE 5'-phosphate decarboxylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GFNHGVEHAF 10
GF+ + HAF
Sbjct: 93 GFDAAIAHAF 102


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GFNHGVEHAF 10
GF+ G HAF
Sbjct: 140 GFHMGGHHAF 149


>sp|ALF1_HALSA|FRUCTOSE-BISPHOSPHATE aldolase class 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 GFNHGVEHA 9
++HG+EH
Sbjct: 19 AYDHGLEHG 27


>sp|ALF1_HALS3|FRUCTOSE-BISPHOSPHATE aldolase class 1|Halobacterium salinarum (strain ATCC 29341

Query: 1 GFNHGVEHA 9
++HG+EH
Sbjct: 19 AYDHGLEHG 27


>sp|MTIP_METJA|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanocaldococcus

Query: 2 FNHGVEH 8
F HGV H
Sbjct: 43 FRHGVRH 49


>sp|APGM_SULAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 FNHGVEH 8
F HG EH
Sbjct: 143 FYHGTEH 149


>sp|APGM_METS5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Metallosphaera sedula (strain ATCC 51363

Query: 2 FNHGVEH 8
F HG EH
Sbjct: 143 FYHGTEH 149


>sp|APGM_SULTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FNHGVEH 8
F HG EH
Sbjct: 143 FYHGTEH 149


>sp|Y2025_ARCFU|UNCHARACTERIZED protein AF_2025|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FNHGVEHA 9
NHGVE A
Sbjct: 141 LNHGVELA 148


>sp|SURE_METTP|5'-NUCLEOTIDASE SurE|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 NHGVEHAF 10
NH VE+ F
Sbjct: 142 NHSVEYKF 149


>sp|Y897_ARCFU|UNCHARACTERIZED protein AF_0897|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 NHGVEHA 9
NHG+E+
Sbjct: 295 NHGIEYG 301


>sp|AATI_METMA|A-TYPE ATP synthase subunit I|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 NHGVEHA 9
+HG++HA
Sbjct: 484 HHGIKHA 490


>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 3 NHGVEHAF 10
NH ++H F
Sbjct: 280 NHTIDHRF 287


>sp|Y778_METJA|UNCHARACTERIZED protein MJ0778|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 HGVEHA 9
HG+EH
Sbjct: 63 HGIEHG 68




78|SequenceR|395|386|SDHPSGFNHG

>sp|URK_HALSA|URIDINE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 DHPSGF 7
DHPS F
Sbjct: 59 DHPSAF 64


>sp|GLMM_THEKO|PROBABLE phosphoglucosamine mutase|Thermococcus kodakarensis (strain ATCC

Query: 1 SDHPSGF 7
+ HPSGF
Sbjct: 196 NSHPSGF 202


>sp|GLMM_THEGJ|PROBABLE phosphoglucosamine mutase|Thermococcus gammatolerans (strain DSM

Query: 1 SDHPSGF 7
+ HPSGF
Sbjct: 196 NSHPSGF 202


>sp|GLMM_THEON|PROBABLE phosphoglucosamine mutase|Thermococcus onnurineus (strain NA1)

Query: 1 SDHPSGF 7
+ HPSGF
Sbjct: 196 NSHPSGF 202


>sp|Y400_METKA|UPF0200 protein MK0400|Methanopyrus kandleri (strain AV19 /

Query: 2 DHPSGFNH 9
D P GF+H
Sbjct: 184 DLPGGFDH 191


>sp|RL32_PYRAE|LARGE ribosomal subunit protein eL32|Pyrobaculum aerophilum (strain

Query: 3 HPSGF 7
HPSGF
Sbjct: 80 HPSGF 84


>sp|RMLC_METTH|DTDP-4-DEHYDRORHAMNOSE 3,5-epimerase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 PSGFNHG 10
P GF HG
Sbjct: 115 PEGFAHG 121


>sp|TF2B5_HALSA|TRANSCRIPTION initiation factor IIB 5|Halobacterium salinarum (strain ATCC 700922

Query: 3 HPSGF 7
HPSGF
Sbjct: 259 HPSGF 263


>sp|G1PDH_SACS2|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus solfataricus (strain ATCC

Query: 3 HPSGFNHG 10
HP G HG
Sbjct: 261 HPEGILHG 268


>sp|Y1612_HALMA|UNCHARACTERIZED protein rrnAC1612|Haloarcula marismortui (strain ATCC 43049

Query: 1 SDHPSGFN 8
SD P GF+
Sbjct: 243 SDEPEGFD 250


>sp|RL32_PICTO|LARGE ribosomal subunit protein eL32|Picrophilus torridus (strain ATCC

Query: 3 HPSGF 7
HPSGF
Sbjct: 78 HPSGF 82


>sp|G1PDH_SACI7|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain Y.G.57.14

Query: 3 HPSGFNHG 10
HP G HG
Sbjct: 261 HPEGVLHG 268


>sp|G1PDH_SACI6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.16.4 /

Query: 3 HPSGFNHG 10
HP G HG
Sbjct: 261 HPEGVLHG 268


>sp|G1PDH_SACI4|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.14.25 /

Query: 3 HPSGFNHG 10
HP G HG
Sbjct: 261 HPEGVLHG 268


>sp|G1PDH_SACI3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.16.27)

Query: 3 HPSGFNHG 10
HP G HG
Sbjct: 261 HPEGVLHG 268


>sp|G1PDH_SACI2|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 HPSGFNHG 10
HP G HG
Sbjct: 261 HPEGVLHG 268


>sp|G1PDH_SACI1|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain Y.N.15.51

Query: 3 HPSGFNHG 10
HP G HG
Sbjct: 261 HPEGVLHG 268


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 2 DHPSGFNHG 10
DHP+G G
Sbjct: 1062 DHPTGVYSG 1070


>sp|PSTB_METBU|PHOSPHATE import ATP-binding protein PstB|Methanococcoides burtonii (strain

Query: 1 SDHPSGFNHG 10
SDH + F HG
Sbjct: 217 SDHTAFFLHG 226


>sp|SYS2_METBU|TYPE-2 serine--tRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 HPSGFN 8
+PSGFN
Sbjct: 443 YPSGFN 448


>sp|RL32_HALSA|LARGE ribosomal subunit protein eL32|Halobacterium salinarum (strain ATCC

Query: 3 HPSGF 7
HPSGF
Sbjct: 175 HPSGF 179


>sp|Y096_PYRAR|PROTEIN Pars_0096|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 HPSGFNHG 10
HP GF G
Sbjct: 214 HPKGFEVG 221


>sp|PURT_THEKO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Thermococcus

Query: 1 SDHPSGFN 8
+ HP+GF+
Sbjct: 302 ASHPTGFS 309


>sp|GLYA_METST|SERINE hydroxymethyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 1 SDHPSGFNHG 10
SD+PSG G
Sbjct: 352 SDNPSGIRMG 361


>sp|RL32_HALMA|LARGE ribosomal subunit protein eL32|Haloarcula marismortui (strain ATCC

Query: 3 HPSGF 7
HPSGF
Sbjct: 179 HPSGF 183


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 DHPSGFNH 9
DHP F H
Sbjct: 304 DHPEWFYH 311


>sp|GLYA_META3|SERINE hydroxymethyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 SDHPSGFNHG 10
SD+PSG G
Sbjct: 356 SDNPSGIRLG 365


>sp|GLYA_METJA|SERINE hydroxymethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SDHPSGFNHG 10
SD+PSG G
Sbjct: 356 SDNPSGIRLG 365




79|SequenceR|400|391|TCETGSDHPS

>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 2 CETGSDHP 9
CE G D+P
Sbjct: 506 CEVGPDYP 513


>sp|TRPCD_ARCFU|TRYPTOPHAN biosynthesis protein TrpCD|Archaeoglobus fulgidus (strain ATCC

Query: 1 TCETGSDHPS 10
TC TG D S
Sbjct: 293 TCGTGGDKTS 302


>sp|SEPS_METKA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 ETGSDHP 9
ETG HP
Sbjct: 45 ETGEPHP 51


>sp|TRPD_METJA|ANTHRANILATE phosphoribosyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 TCETGSDH 8
TC TG D+
Sbjct: 78 TCGTGGDN 85




80|SequenceR|405|396|KSEGPTCETG

>sp|HIS3_SULTO|PHOSPHORIBOSYL-AMP cyclohydrolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KSEGPTCETG 10
KS GP C TG
Sbjct: 96 KSVGPVCHTG 105


>sp|DCDA_ARCFU|DIAMINOPIMELATE decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GPTCETG 10
GP CE+G
Sbjct: 340 GPICESG 346


>sp|HIS3_SACS2|PHOSPHORIBOSYL-AMP cyclohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SEGPTCETG 10
S GP C TG
Sbjct: 60 SLGPICHTG 68


>sp|HIS2_PYRFU|HISTIDINE biosynthesis bifunctional protein HisIE|Pyrococcus furiosus

Query: 3 EGPTCETG 10
+GP C TG
Sbjct: 92 KGPACHTG 99


>sp|DAPAT_METST|LL-DIAMINOPIMELATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 SEGPTCETG 10
S+G C+TG
Sbjct: 106 SDGAKCDTG 114


>sp|HIS3_CENSY|PHOSPHORIBOSYL-AMP cyclohydrolase|Cenarchaeum symbiosum (strain A)

Query: 4 GPTCETG 10
GP C TG
Sbjct: 92 GPACHTG 98


>sp|DAPAT_METS3|LL-DIAMINOPIMELATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 SEGPTCETG 10
S+G C+TG
Sbjct: 106 SDGAKCDTG 114


>sp|HIS3_NITMS|PHOSPHORIBOSYL-AMP cyclohydrolase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 GPTCETG 10
GP C TG
Sbjct: 92 GPACHTG 98


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 5 PTCETG 10
P CETG
Sbjct: 185 PRCETG 190


>sp|DAPAT_METTH|LL-DIAMINOPIMELATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 SEGPTCETG 10
S+G C+TG
Sbjct: 105 SDGAKCDTG 113




81|SequenceR|410|401|KQGLNKSEGP

>sp|GPGS_METBU|GLUCOSYL-3-PHOSPHOGLYCERATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 GLNKSEG 9
G+N+SEG
Sbjct: 276 GVNRSEG 282


>sp|RL29_METMP|LARGE ribosomal subunit protein uL29|Methanococcus maripaludis (strain

Query: 1 KQGLNKSEG 9
K+G+NKS G
Sbjct: 30 KEGVNKSTG 38


>sp|RL29_METM7|LARGE ribosomal subunit protein uL29|Methanococcus maripaludis (strain

Query: 1 KQGLNKSEG 9
K+G+NKS G
Sbjct: 30 KEGVNKSTG 38


>sp|RL29_METM5|LARGE ribosomal subunit protein uL29|Methanococcus maripaludis (strain

Query: 1 KQGLNKSEG 9
K+G+NKS G
Sbjct: 30 KEGVNKSTG 38


>sp|UPPS_HALMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Haloarcula

Query: 1 KQGLNKSEG 9
KQG K EG
Sbjct: 41 KQGTKKQEG 49


>sp|MFNA_METJA|L-TYROSINE/L-ASPARTATE decarboxylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KQGLNKSEGP 10
++GL+K+E P
Sbjct: 114 RKGLSKNEHP 123


>sp|QUEC_METM7|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain C7 /

Query: 3 GLNKSEG 9
GLNK EG
Sbjct: 127 GLNKEEG 133


>sp|QUEC_METVS|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GLNKSEG 9
GLNK EG
Sbjct: 127 GLNKEEG 133


>sp|QUEC_METMP|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GLNKSEG 9
GLNK EG
Sbjct: 127 GLNKEEG 133


>sp|QUEC_METM6|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain C6 /

Query: 3 GLNKSEG 9
GLNK EG
Sbjct: 127 GLNKEEG 133




82|SequenceR|415|406|YNGNEKQGLN

>sp|RS2_HALMA|SMALL ribosomal subunit protein uS2|Haloarcula marismortui (strain ATCC

Query: 2 NGNEKQGLN 10
+GNEK+GL+
Sbjct: 2 SGNEKEGLD 10


>sp|THS_METMP|CHAPERONIN subunit|Methanococcus maripaludis (strain DSM 14266

Query: 2 NGNEKQGLN 10
NGN+ GLN
Sbjct: 466 NGNKCAGLN 474


>sp|ASPD_METM5|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 2 NGNEKQGLN 10
N E+QGLN
Sbjct: 155 NALEEQGLN 163




83|SequenceR|420|411|RAYMIYNGNE

>sp|THIM_PYRFU|HYDROXYETHYLTHIAZOLE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RAYMIYNGNE 10
R Y +YNG+E
Sbjct: 176 RVYAVYNGHE 185


>sp|THIM_PYRHO|HYDROXYETHYLTHIAZOLE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RAYMIYNGNE 10
R + +YNG+E
Sbjct: 176 RTFAVYNGHE 185


>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 YMIYNGNE 10
Y+IY GNE
Sbjct: 45 YIIYEGNE 52


>sp|Y1209_CALMQ|PROTEIN Cmaq_1209|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 RAYMIYNGNE 10
RAY+I GNE
Sbjct: 2 RAYVITIGNE 11


>sp|RIBB_METAC|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 AYMIYNGNE 10
AYM++ G+E
Sbjct: 238 AYMLWTGSE 246


>sp|THIC_SULAC|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 AYMIYNGNE 10
+MI+NG E
Sbjct: 192 GWMIHNGKE 200


>sp|RS3A_IGNH4|SMALL ribosomal subunit protein eS1|Ignicoccus hospitalis (strain

Query: 1 RAYMIYNGNE 10
+AY I+ G+E
Sbjct: 79 KAYTIFKGHE 88


>sp|HIS7_METB6|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanoregula boonei (strain DSM 21154

Query: 1 RAYMIYNG 8
R Y++Y G
Sbjct: 111 RGYLVYTG 118


>sp|FRHG_METBF|COENZYME F420 hydrogenase subunit gamma|Methanosarcina barkeri (strain

Query: 2 AYMIYNGNE 10
AY++ GNE
Sbjct: 143 AYLLLEGNE 151


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 3 YMIYNGNE 10
Y+ YNG E
Sbjct: 538 YLTYNGTE 545


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 YMIYNGNE 10
Y+ YNG E
Sbjct: 538 YLTYNGTE 545


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 YMIYNGNE 10
Y+ YNG E
Sbjct: 538 YLTYNGTE 545


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 YMIYNGNE 10
Y+ YNG E
Sbjct: 538 YLTYNGTE 545


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 YMIYNGNE 10
Y+ YNG E
Sbjct: 538 YLTYNGTE 545


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 YMIYNGNE 10
Y+ YNG E
Sbjct: 538 YLTYNGTE 545


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 YMIYNGNE 10
Y+ YNG E
Sbjct: 538 YLTYNGTE 545


>sp|AMPPA_METM7|AMP phosphorylase|Methanococcus maripaludis (strain C7 /

Query: 3 YMIYNGNE 10
Y IY+G+E
Sbjct: 469 YTIYSGSE 476


>sp|AMPPA_METM6|AMP phosphorylase|Methanococcus maripaludis (strain C6 /

Query: 3 YMIYNGNE 10
Y IY+G+E
Sbjct: 469 YTIYSGSE 476


>sp|AMPPA_METMP|AMP phosphorylase|Methanococcus maripaludis (strain DSM 14266

Query: 3 YMIYNGNE 10
Y IY+G+E
Sbjct: 469 YTIYSGSE 476


>sp|AMPPA_METM5|AMP phosphorylase|Methanococcus maripaludis (strain C5 /

Query: 3 YMIYNGNE 10
Y IY+G+E
Sbjct: 469 YTIYSGSE 476


>sp|AMPPA_METVS|AMP phosphorylase|Methanococcus vannielii (strain ATCC 35089

Query: 3 YMIYNGNE 10
Y IY+G+E
Sbjct: 469 YTIYSGSE 476


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 3 YMIYNGNE 10
Y+ YNG E
Sbjct: 538 YLTYNGTE 545


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 3 YMIYNGNE 10
Y+ YNG E
Sbjct: 538 YVTYNGTE 545


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 RAYMIYNGNE 10
R Y+IYN E
Sbjct: 370 RFYLIYNRPE 379


>sp|SYT_NANEQ|THREONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 RAYMIYNGNE 10
+ Y+IY+G +
Sbjct: 149 KVYLIYDGEK 158




84|SequenceR|425|416|DGSTARAYMI

>sp|NFI_THEAC|BIFUNCTIONAL methyltransferase/endonuclease|Thermoplasma acidophilum (strain

Query: 1 DGSTARAYMI 10
DGST AY+I
Sbjct: 166 DGSTIEAYVI 175


>sp|PYRH_SULTO|URIDYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GSTARAYM 9
GSTAR Y+
Sbjct: 44 GSTARKYI 51


>sp|THIC1_METST|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DGSTARAY 8
DG TAR Y
Sbjct: 389 DGETARKY 396


>sp|PYRH_SACI7|URIDYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 GSTARAYM 9
GSTAR Y+
Sbjct: 44 GSTARRYI 51


>sp|PYRH_SACI6|URIDYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 GSTARAYM 9
GSTAR Y+
Sbjct: 44 GSTARRYI 51


>sp|PYRH_SACI4|URIDYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 GSTARAYM 9
GSTAR Y+
Sbjct: 44 GSTARRYI 51


>sp|PYRH_SACI2|URIDYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 GSTARAYM 9
GSTAR Y+
Sbjct: 44 GSTARRYI 51


>sp|PYRH_SACI1|URIDYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 GSTARAYM 9
GSTAR Y+
Sbjct: 44 GSTARRYI 51


>sp|PYRH_SACI3|URIDYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 GSTARAYM 9
GSTAR Y+
Sbjct: 44 GSTARRYI 51


>sp|PYRH_SACS2|URIDYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GSTARAYM 9
GSTAR Y+
Sbjct: 45 GSTARRYI 52


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DGSTARAYMI 10
+G+TA AY+I
Sbjct: 545 NGTTAMAYVI 554


>sp|ARGC_METMJ|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GSTARAYM 9
GSTAR Y
Sbjct: 212 GSTARCYF 219




85|SequenceR|430|421|NNNLKDGSTA

>sp|SYS_METS5|SERINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 NNNLKDGS 8
NN L+DGS
Sbjct: 420 NNQLEDGS 427


>sp|SYS_METAR|SERINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 NNNLKDGS 8
NN KDGS
Sbjct: 401 NNQQKDGS 408


>sp|HERA_SULAC|DNA double-strand break repair helicase|Sulfolobus acidocaldarius

Query: 1 NNNLKDGSTA 10
NN +K+G T+
Sbjct: 235 NNEIKEGKTS 244




86|SequenceR|435|426|CLSFKNNNLK

>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 SFKNNNLK 10
+FKNNN++
Sbjct: 322 TFKNNNIE 329


>sp|Y560_METJA|UNCHARACTERIZED protein MJ0560|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CLSFKNNNLK 10
C+ FKN N++
Sbjct: 71 CIDFKNVNVE 80


>sp|Y2387_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 LSFKNNNLK 10
LSFKN ++K
Sbjct: 65 LSFKNRDIK 73


>sp|HACA_METJA|METHANOGEN homoaconitase large subunit|Methanocaldococcus jannaschii (strain

Query: 1 CLSFKNNNLK 10
CLS N N K
Sbjct: 379 CLSTTNRNFK 388


>sp|LEUC2_ARCFU|3-ISOPROPYLMALATE dehydratase large subunit 2|Archaeoglobus fulgidus (strain ATCC

Query: 1 CLSFKNNNLK 10
C+S +N N K
Sbjct: 373 CISTQNRNFK 382


>sp|PYRB_METBF|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina barkeri

Query: 2 LSFKNNNL 9
+SFKN N+
Sbjct: 1 MSFKNRNV 8


>sp|RIBB_METMA|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CLSFKNNNL 9
CL + N N+
Sbjct: 9 CLKYSNENI 17


>sp|Y703_METJA|UNCHARACTERIZED protein MJ0703|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LSFKNNNL 9
L FKN NL
Sbjct: 126 LDFKNGNL 133


>sp|Y1535_METJA|UNCHARACTERIZED protein MJ1535|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CLSFKNNNL 9
L+FKN+N+
Sbjct: 140 VLTFKNDNV 148




87|SequenceR|440|431|INRISCLSFK

>sp|T1R1_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 INRISCLSFK 10
+NR+ C+ FK
Sbjct: 573 VNRLGCVRFK 582


>sp|FUMC_SACS2|FUMARATE hydratase class II|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 INRISCLSFK 10
INRI+ L FK
Sbjct: 222 INRITGLGFK 231


>sp|Y1030_METLZ|UPF0210 protein Mlab_1030|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 INRISCLSF 9
+N+ SC +F
Sbjct: 430 VNKFSCANF 438


>sp|Y560_METJA|UNCHARACTERIZED protein MJ0560|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NRISCLSFK 10
N I C+ FK
Sbjct: 67 NLIDCIDFK 75




88|SequenceR|445|436|ELVQSINRIS

>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 1 ELVQSINRIS 10
ELV++++RIS
Sbjct: 131 ELVETVDRIS 140


>sp|CAPPA_METAC|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ELVQSINRIS 10
EL +INR+S
Sbjct: 324 ELASTINRLS 333




89|SequenceR|450|441|NNRKKELVQS

>sp|HEM4_METTH|PUTATIVE uroporphyrinogen-III synthase|Methanothermobacter

Query: 2 NRKKELVQ 9
NR+KEL++
Sbjct: 197 NRRKELIE 204


>sp|AROK_METAC|SHIKIMATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NNRKKELVQ 9
+NRK ELV+
Sbjct: 153 DNRKMELVR 161


>sp|AATF_THEGJ|A-TYPE ATP synthase subunit F|Thermococcus gammatolerans (strain DSM

Query: 1 NNRKKELVQ 9
NN+ KELV+
Sbjct: 37 NNKLKELVE 45




90|SequenceR|455|446|SEVFCNNRKK

>sp|DPHB_THEVO|DIPHTHINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 CNNRKK 10
CNNR+K
Sbjct: 190 CNNRRK 195


>sp|HEM3_METTH|PROBABLE porphobilinogen deaminase|Methanothermobacter thermautotrophicus

Query: 2 EVFCNNRKK 10
E FCN+ +K
Sbjct: 125 EAFCNHHQK 133


>sp|ARSA_METTH|PUTATIVE arsenical pump-driving ATPase|Methanothermobacter

Query: 4 FCNNRKK 10
FCN R+K
Sbjct: 270 FCNARRK 276


>sp|TIAS_THEVO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermoplasma volcanium (strain

Query: 4 FCNNRKK 10
FCN R K
Sbjct: 369 FCNTRTK 375


>sp|TOP6A_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 2 EVFCNNRKK 10
++F N+RKK
Sbjct: 301 DIFGNSRKK 309




91|SequenceR|460|451|CIPQGSEVFC

>sp|RL2_AERPE|LARGE ribosomal subunit protein uL2|Aeropyrum pernix (strain ATCC 700893

Query: 2 IPQGSEVF 9
IP+G+EVF
Sbjct: 99 IPEGTEVF 106


>sp|AROA_NITMS|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 IPQGSEVF 9
+PQG EVF
Sbjct: 260 LPQGDEVF 267


>sp|RL2_IGNH4|LARGE ribosomal subunit protein uL2|Ignicoccus hospitalis (strain KIN4/I

Query: 2 IPQGSEVF 9
IP+G+++F
Sbjct: 103 IPEGTQIF 110


>sp|IF1A_NATPD|TRANSLATION initiation factor 1A|Natronomonas pharaonis (strain ATCC 35678

Query: 2 IPQGSEVF 9
+P+G EVF
Sbjct: 12 MPEGDEVF 19


>sp|FEN_NANEQ|FLAP endonuclease 1|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 IPQGSEVF 9
IP G E+F
Sbjct: 269 IPNGKEIF 276


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IPQGSEV 8
IP+GSE+
Sbjct: 691 IPEGSEI 697


>sp|CAS6_PYRHO|CRISPR-ASSOCIATED endoribonuclease Cas6|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 CIPQGSEVF 9
CIP+ +E F
Sbjct: 87 CIPEIAEAF 95


>sp|Y1980_AERPE|PROTEIN APE_1980.1|Aeropyrum pernix (strain ATCC 700893

Query: 3 PQGSEV 8
PQGSE+
Sbjct: 216 PQGSEI 221


>sp|COABC_METJA|COENZYME A biosynthesis bifunctional protein|Methanocaldococcus jannaschii

Query: 2 IPQGSEVFC 10
I G+EV+C
Sbjct: 46 IRHGAEVYC 54


>sp|Y620_PYRFU|UPF0251 protein PF0620|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IPQGSEV 8
+PQG+EV
Sbjct: 96 LPQGNEV 102


>sp|Y1266_PYRAB|UPF0251 protein PYRAB12660|Pyrococcus abyssi (strain GE5 /

Query: 2 IPQGSEV 8
+PQG+EV
Sbjct: 99 LPQGNEV 105


>sp|Y2251_ARCFU|PROTEIN AF_2251|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IPQGSEV 8
+P+GSE+
Sbjct: 115 VPEGSEI 121


>sp|Y1487_METJA|UNCHARACTERIZED methyltransferase MJ1487|Methanocaldococcus jannaschii (strain ATCC

Query: 1 CIPQGSEVF 9
CI +G E F
Sbjct: 115 CIGEGEETF 123


>sp|Y008_METKA|UNCHARACTERIZED protein MK0008|Methanopyrus kandleri (strain AV19 /

Query: 1 CIPQGSEV 8
CI QG+EV
Sbjct: 72 CIEQGAEV 79


>sp|CBIM1_METLZ|PUTATIVE cobalt transport protein CbiM|Methanocorpusculum labreanum (strain

Query: 2 IPQGSEVFC 10
+P G VFC
Sbjct: 136 VPLGPAVFC 144


>sp|FDHB_METFO|F420-DEPENDENT formate dehydrogenase subunit beta|Methanobacterium formicicum

Query: 1 CIPQGSEVF 9
C P+G+EV
Sbjct: 225 CSPKGAEVL 233




92|SequenceR|465|456|VMGNGCIPQG

>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 1 VMGNGCIPQ 9
+MG GC P+
Sbjct: 238 LMGKGCFPE 246


>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 1 VMGNGCIP 8
++G GC+P
Sbjct: 238 ILGGGCLP 245


>sp|NEP1_AERPE|RIBOSOMAL RNA small subunit methyltransferase|Aeropyrum pernix (strain ATCC

Query: 2 MGNGCIPQG 10
+G GC P+G
Sbjct: 173 IGVGCFPRG 181


>sp|PURA_HALSA|ADENYLOSUCCINATE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VMGNGCI 7
V+GNGC+
Sbjct: 65 VLGNGCV 71


>sp|PURA_HALS3|ADENYLOSUCCINATE synthetase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VMGNGCI 7
V+GNGC+
Sbjct: 65 VLGNGCV 71


>sp|PURA_HALMA|ADENYLOSUCCINATE synthetase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VMGNGCI 7
V+GNGC+
Sbjct: 65 VLGNGCV 71


>sp|PURA_NATPD|ADENYLOSUCCINATE synthetase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VMGNGCI 7
V+GNGC+
Sbjct: 65 VLGNGCV 71


>sp|DMSR_HALSA|DIMETHYL sulfoxide reductase transcriptional activator|Halobacterium

Query: 4 NGCIPQ 9
+GC+PQ
Sbjct: 90 HGCVPQ 95


>sp|FAU1_SACI7|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VMGNGCIPQ 9
VMGNG I +
Sbjct: 62 VMGNGTIEE 70


>sp|FAU1_SACI6|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VMGNGCIPQ 9
VMGNG I +
Sbjct: 62 VMGNGTIEE 70


>sp|FAU1_SACI4|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VMGNGCIPQ 9
VMGNG I +
Sbjct: 62 VMGNGTIEE 70


>sp|FAU1_SACI3|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.27)

Query: 1 VMGNGCIPQ 9
VMGNG I +
Sbjct: 62 VMGNGTIEE 70


>sp|FAU1_SACI2|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VMGNGCIPQ 9
VMGNG I +
Sbjct: 62 VMGNGTIEE 70


>sp|CYAS_METB6|CYSTEATE synthase|Methanoregula boonei (strain DSM 21154

Query: 5 GCIPQG 10
GC+P+G
Sbjct: 193 GCVPEG 198


>sp|G1PDH_NATPD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VMGNGCIPQG 10
V G G +P+G
Sbjct: 128 VSGRGSVPEG 137


>sp|G1PDH_HALSA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halobacterium salinarum (strain ATCC 700922

Query: 1 VMGNGCIPQG 10
V G G +P+G
Sbjct: 128 VSGRGSVPEG 137


>sp|G1PDH_HALS3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halobacterium salinarum (strain ATCC 29341

Query: 1 VMGNGCIPQG 10
V G G +P+G
Sbjct: 128 VSGRGSVPEG 137


>sp|G1PDH_HALMA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Haloarcula marismortui (strain ATCC 43049

Query: 1 VMGNGCIPQG 10
V G G +P+G
Sbjct: 128 VSGRGSVPEG 137


>sp|TREZ_SACS2|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VMGNGCI 7
V GNGC+
Sbjct: 509 VKGNGCL 515


>sp|RPO1C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus vannielii (strain ATCC

Query: 2 MGNGCI 7
MG GCI
Sbjct: 367 MGTGCI 372


>sp|RPO1C_METMP|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain DSM

Query: 2 MGNGCI 7
MG GCI
Sbjct: 367 MGTGCI 372


>sp|RPO1C_METM7|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C7 /

Query: 2 MGNGCI 7
MG GCI
Sbjct: 367 MGTGCI 372


>sp|RPO1C_METM6|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C6 /

Query: 2 MGNGCI 7
MG GCI
Sbjct: 367 MGTGCI 372


>sp|RPO1C_METM5|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C5 /

Query: 2 MGNGCI 7
MG GCI
Sbjct: 367 MGTGCI 372


>sp|GSA2_CENSY|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase 2|Cenarchaeum symbiosum (strain A)

Query: 3 GNGCIP 8
G GCIP
Sbjct: 211 GGGCIP 216


>sp|PRIS_NITMS|DNA primase small subunit PriS|Nitrosopumilus maritimus (strain SCM1)

Query: 1 VMGNGCIPQ 9
+M NG IP+
Sbjct: 205 IMFNGAIPE 213


>sp|FAU1_SACS2|PROBABLE ribonuclease FAU-1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VMGNGCI 7
VMGNG I
Sbjct: 62 VMGNGII 68


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 2 MGNGCI 7
MG GCI
Sbjct: 298 MGGGCI 303


>sp|PRIS_AERPE|DNA primase small subunit PriS|Aeropyrum pernix (strain ATCC 700893

Query: 1 VMGNGCIPQG 10
V+G+ C+ +G
Sbjct: 109 VLGDSCLSRG 118


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 1 VMGNGCIPQ 9
+MG GCI +
Sbjct: 238 LMGKGCISE 246


>sp|RL37_THEON|LARGE ribosomal subunit protein eL37|Thermococcus onnurineus (strain

Query: 2 MGNGCIPQG 10
MG+G P+G
Sbjct: 1 MGSGTAPKG 9


>sp|CAH_METTT|CARBONIC anhydrase|Methanosarcina thermophila (strain ATCC 43570

Query: 3 GNGCIPQG 10
G+GCI +G
Sbjct: 21 GSGCISEG 28




93|SequenceR|470|461|EEGQEVMGNG

>sp|PYRI_THEGJ|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus gammatolerans

Query: 2 EGQEVMGN 9
EG+E++GN
Sbjct: 143 EGEEIIGN 150


>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 QEVMGNG 10
+EVMGNG
Sbjct: 703 EEVMGNG 709


>sp|HBCAL_NITMS|4-HYDROXYBUTYRATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 1 EEGQEVM 7
EEGQEV+
Sbjct: 488 EEGQEVL 494


>sp|WTPA_ARCFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EEGQEVM 7
EEGQE++
Sbjct: 309 EEGQEIL 315


>sp|NUCS_PYRAE|ENDONUCLEASE NucS|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EEGQEVMG 8
EEG EV+G
Sbjct: 146 EEGLEVVG 153


>sp|RPIA_METTH|RIBOSE-5-PHOSPHATE isomerase A|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 EEGQEVMG 8
EEG EVMG
Sbjct: 46 EEGLEVMG 53




94|SequenceR|475|466|YGCDCEEGQE

>sp|PRIS_METST|DNA primase small subunit PriS|Methanosphaera stadtmanae (strain ATCC

Query: 3 CDCEEGQ 9
CDC EG+
Sbjct: 108 CDCAEGE 114


>sp|SYE_META3|GLUTAMATE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 YGCDCE 6
Y CDCE
Sbjct: 192 YVCDCE 197


>sp|OGT_SACS2|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 CDCEEG 8
CDC EG
Sbjct: 29 CDCVEG 34


>sp|OGT_SACI7|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 CDCEEG 8
CDC EG
Sbjct: 29 CDCVEG 34


>sp|OGT_SACI6|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 CDCEEG 8
CDC EG
Sbjct: 29 CDCVEG 34


>sp|OGT_SACI4|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 CDCEEG 8
CDC EG
Sbjct: 29 CDCVEG 34


>sp|OGT_SACI3|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 3 CDCEEG 8
CDC EG
Sbjct: 29 CDCVEG 34


>sp|OGT_SACI2|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 CDCEEG 8
CDC EG
Sbjct: 29 CDCVEG 34


>sp|OGT_SACI1|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 CDCEEG 8
CDC EG
Sbjct: 29 CDCVEG 34


>sp|KAD6_THEVO|PUTATIVE adenylate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YGCDCEEGQE 10
YG +C+EG E
Sbjct: 25 YGYNCKEGNE 34


>sp|TBP2_METAC|TATA-BOX-BINDING protein 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 DCEEG 8
DCEEG
Sbjct: 166 DCEEG 170


>sp|GLCD1_HALTV|GLUCOSE 1-dehydrogenase 1|Haloterrigena turkmenica (strain ATCC 51198

Query: 2 GCDCEEGQ 9
G D EEGQ
Sbjct: 74 GTDLEEGQ 81


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 CDCEE 7
CDCEE
Sbjct: 778 CDCEE 782


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GCDCE 6
GCDC+
Sbjct: 239 GCDCK 243


>sp|TBP3_METMA|TATA-BOX-BINDING protein 3|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 DCEEG 8
DCEEG
Sbjct: 166 DCEEG 170


>sp|DNAK_METBU|CHAPERONE protein DnaK|Methanococcoides burtonii (strain DSM 6242

Query: 1 YGCDCEEG 8
YG D EEG
Sbjct: 156 YGLDKEEG 163


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GCDCE 6
GC+CE
Sbjct: 450 GCNCE 454


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 4 DCEEGQ 9
DC EGQ
Sbjct: 468 DCSEGQ 473


>sp|EF2_PICTO|ELONGATION factor 2|Picrophilus torridus (strain ATCC 700027

Query: 1 YGCDCEEGQ 9
YG CE G+
Sbjct: 613 YGAMCEAGR 621


>sp|Y1537_METJA|UNCHARACTERIZED protein MJ1537|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGCDCEEGQE 10
+ C+C G+E
Sbjct: 21 HNCNCNIGEE 30


>sp|SYE_METMP|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YGCDCE 6
Y CDC+
Sbjct: 186 YVCDCD 191


>sp|Y2141_ARCFU|UNCHARACTERIZED protein AF_2141|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GCDCEEGQE 10
GCD + G+E
Sbjct: 4 GCDNQRGRE 12


>sp|SYE_METM5|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 YGCDCE 6
Y CDC+
Sbjct: 186 YVCDCD 191


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 YGCDCE 6
Y CDC+
Sbjct: 186 YVCDCD 191


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 YGCDCE 6
Y CDC+
Sbjct: 186 YVCDCD 191


>sp|METK_METBU|S-ADENOSYLMETHIONINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GCDC 5
GCDC
Sbjct: 262 GCDC 265


>sp|VORB_METTM|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter marburgensis

Query: 2 GCDCEEG 8
GCDC G
Sbjct: 20 GCDCYFG 26




95|SequenceR|480|471|KCQDSYGCDC

>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KCQDSYGCD 9
+C+D YGC+
Sbjct: 225 RCEDEYGCE 233


>sp|Y249_PYRAB|PUTATIVE GTPase PYRAB02490|Pyrococcus abyssi (strain GE5 /

Query: 1 KCQDSYGCD 9
K D+YGCD
Sbjct: 131 KVLDAYGCD 139


>sp|Y274_PYRHO|PUTATIVE GTPase PH0274|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KCQDSYGCD 9
K D+YGCD
Sbjct: 133 KILDAYGCD 141


>sp|FSX1_NATA2|FUSEXIN 1|Natrinema altunense (strain JCM 12890

Query: 1 KCQDSYGCD 9
KC DS+G D
Sbjct: 408 KCSDSFGYD 416


>sp|PYRC_METJA|DIHYDROOROTASE jannaschii (strain ATCC 43067

Query: 4 DSYGCDC 10
++YGC C
Sbjct: 417 EAYGCKC 423


>sp|SYK_CENSY|LYSINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 CQDSYG 7
C DSYG
Sbjct: 109 CHDSYG 114


>sp|SYK_CENSM|LYSINE--TRNA ligase|Cenarchaeum symbiosum

Query: 2 CQDSYG 7
C DSYG
Sbjct: 108 CHDSYG 113


>sp|THIC2_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 SYGCD 9
SYGCD
Sbjct: 318 SYGCD 322


>sp|THIC2_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 SYGCD 9
SYGCD
Sbjct: 318 SYGCD 322


>sp|THIC1_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina barkeri (strain Fusaro /

Query: 5 SYGCD 9
SYGCD
Sbjct: 318 SYGCD 322


>sp|Y1292_METJA|UNCHARACTERIZED protein MJ1292|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KCQDSYG 7
+C+D YG
Sbjct: 278 RCEDEYG 284


>sp|PURA_METMP|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 2 CQDSYGCDC 10
C D Y DC
Sbjct: 284 CLDKYDSDC 292


>sp|PURA_METM5|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C5 /

Query: 2 CQDSYGCDC 10
C D Y DC
Sbjct: 284 CLDKYDTDC 292


>sp|ASST_METAC|L-ASPARTATE semialdehyde sulfurtransferase|Methanosarcina acetivorans (strain

Query: 5 SYGCDC 10
SYG DC
Sbjct: 126 SYGTDC 131


>sp|MCRAM_METJA|[METHYL coenzyme M reductase]-L-arginine

Query: 2 CQDSYGCD 9
CQ + GCD
Sbjct: 43 CQFTVGCD 50


>sp|Y926_METJA|UNCHARACTERIZED protein MJ0926|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KCQDSYGCDC 10
+C + Y C C
Sbjct: 34 RCNNKYICTC 43


>sp|CPGS_METFV|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermus fervidus (strain

Query: 3 QDSYGCD 9
+ YGCD
Sbjct: 367 ESKYGCD 373


>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 CQDSYG 7
CQ SYG
Sbjct: 238 CQKSYG 243




96|SequenceR|485|476|FCCEDKCQDS

>sp|AROC_IGNH4|CHORISMATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 FCCEDKCQD 9
CCE+K ++
Sbjct: 185 LCCEEKAEE 193


>sp|PURP_META3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus aeolicus (strain ATCC

Query: 1 FCCEDKCQDS 10
FC + C DS
Sbjct: 294 FCLQSLCNDS 303


>sp|Y2387_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 CCEDKCQD 9
C E+KC +
Sbjct: 486 CVEEKCAE 493


>sp|PURP_METM5|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C5 /

Query: 1 FCCEDKCQDS 10
FC + C D+
Sbjct: 294 FCLQSLCNDN 303




97|SequenceR|490|481|PQNADFCCED

>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 NADFCCED 10
N D C ED
Sbjct: 433 NPDLCAED 440


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 NADFCCED 10
N D C ED
Sbjct: 435 NPDLCAED 442


>sp|PURL_METS5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Metallosphaera sedula (strain ATCC 51363

Query: 3 NADFCCED 10
N D C ED
Sbjct: 433 NQDLCAED 440


>sp|LONB_METJA|ARCHAEAL Lon protease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PQNADFCCE 9
P D CCE
Sbjct: 344 PMTYDGCCE 352


>sp|Y740_ARCFU|PUTATIVE uncharacterized protein AF_0740|Archaeoglobus fulgidus (strain

Query: 1 PQNADFC 7
P+N D+C
Sbjct: 86 PRNLDYC 92


>sp|TRUA_METAC|TRNA pseudouridine synthase A|Methanosarcina acetivorans (strain ATCC

Query: 1 PQNADFCC 8
P++AD+ C
Sbjct: 43 PKSADYTC 50


>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 NADFCCED 10
N D C ED
Sbjct: 435 NPDMCAED 442


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 NADFCCED 10
N D C ED
Sbjct: 435 NPDLCSED 442


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 3 NADFCCED 10
N D C ED
Sbjct: 435 NPDLCSED 442


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 3 NADFCCED 10
N D C ED
Sbjct: 435 NPDLCSED 442


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 3 NADFCCED 10
N D C ED
Sbjct: 435 NPDLCSED 442


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 NADFCCED 10
N D C ED
Sbjct: 435 NPDLCSED 442


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 NADFCCED 10
N D C ED
Sbjct: 435 NPDLCSED 442




98|SequenceR|495|486|CKRGEPQNAD

>sp|SURE_METMA|5'-NUCLEOTIDASE SurE|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KRGEPQNAD 10
KRG P+N D
Sbjct: 170 KRGMPENVD 178


>sp|GCST_PYRHO|PROBABLE aminomethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KRGEPQNA 9
KRGEP+ A
Sbjct: 217 KRGEPEKA 224


>sp|GCST_PYRAB|PROBABLE aminomethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 KRGEPQNA 9
KRGEP+ A
Sbjct: 217 KRGEPEKA 224


>sp|GCST_THEKO|PROBABLE aminomethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 KRGEPQNA 9
KRGEP+ A
Sbjct: 217 KRGEPEKA 224


>sp|BRIX_PYRHO|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus horikoshii

Query: 2 KRGEPQNAD 10
KRGE +N+D
Sbjct: 216 KRGEGKNSD 224


>sp|RRP4_PICTO|EXOSOME complex component Rrp4|Picrophilus torridus (strain ATCC 700027

Query: 4 GEPQNAD 10
GEP+N D
Sbjct: 183 GEPENVD 189


>sp|GADH_THEAC|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 GEPQNAD 10
G+P+NAD
Sbjct: 311 GDPKNAD 317


>sp|GCST_THEON|PROBABLE aminomethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 KRGEPQNA 9
+RGEP+ A
Sbjct: 217 RRGEPEKA 224


>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 GEPQNAD 10
GEP+N D
Sbjct: 545 GEPKNED 551


>sp|THII_METTH|PROBABLE tRNA sulfurtransferase|Methanothermobacter thermautotrophicus

Query: 1 CKRGEPQ 7
C+RG P+
Sbjct: 253 CRRGAPE 259


>sp|SRP54_METTH|SIGNAL recognition particle 54 kDa|Methanothermobacter thermautotrophicus

Query: 4 GEPQNAD 10
G+PQN D
Sbjct: 159 GDPQNRD 165


>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 5 EPQNAD 10
+PQNAD
Sbjct: 411 DPQNAD 416


>sp|HIS4_THEON|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Thermococcus onnurineus (strain

Query: 4 GEPQNAD 10
G+PQN D
Sbjct: 56 GKPQNLD 62


>sp|HIS4_PYRFU|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Pyrococcus furiosus (strain

Query: 4 GEPQNAD 10
G+PQN D
Sbjct: 58 GKPQNLD 64


>sp|SRP54_SULTO|SIGNAL recognition particle 54 kDa|Sulfurisphaera tokodaii (strain DSM

Query: 4 GEPQNAD 10
GEP N D
Sbjct: 155 GEPNNTD 161


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 3 RGEPQNAD 10
R EP++AD
Sbjct: 85 RNEPEHAD 92


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 CKRGEPQNAD 10
CK+ P+N +
Sbjct: 158 CKKSIPENVE 167


>sp|NTPPA_METAC|DTTP/UTP pyrophosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KRGEPQNAD 10
K G P+NA+
Sbjct: 82 KPGSPENAE 90




99|SequenceR|500|491|GPKLKCKRGE

>sp|CDC62_AERPE|ORC1-TYPE DNA replication protein 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 PKLKCKRGE 10
P+L+ +RGE
Sbjct: 20 PELRVRRGE 28


>sp|Y996_METST|UPF0179 protein Msp_0996|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GPKLKCKRG 9
GP+L CK G
Sbjct: 122 GPELVCKNG 130


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 LKCKRGE 10
L CKRGE
Sbjct: 842 LLCKRGE 848


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 4 LKCKRGE 10
L CKRGE
Sbjct: 842 LLCKRGE 848


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 4 LKCKRGE 10
L CKRGE
Sbjct: 842 LLCKRGE 848


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 4 LKCKRGE 10
L CKRGE
Sbjct: 842 LLCKRGE 848


>sp|T1M1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 5 KCKRGE 10
KCK GE
Sbjct: 246 KCKEGE 251


>sp|PYRI_CENSY|ASPARTATE carbamoyltransferase regulatory chain|Cenarchaeum symbiosum (strain

Query: 1 GPKLKCK 7
GP LKC+
Sbjct: 133 GPVLKCR 139


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 CKRGE 10
CKRGE
Sbjct: 843 CKRGE 847




100|SequenceR|505|496|PSCQKGPKLK

>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 CQKGPKL 9
CQK PKL
Sbjct: 287 CQKAPKL 293


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 1 PSCQKGPKLK 10
P +KG KLK
Sbjct: 1088 PKLEKGQKLK 1097


>sp|THIL_METJA|THIAMINE-MONOPHOSPHATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CQKGPKL 9
CQK PK+
Sbjct: 186 CQKYPKI 192


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PSCQKGPKLK 10
P +KG KLK
Sbjct: 1585 PKLEKGMKLK 1594




101|SequenceR|510|501|CPGQSPSCQK

>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi

Query: 1 CPGQSP 6
CPG SP
Sbjct: 39 CPGSSP 44


>sp|HIS7_PYRAR|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PGQSPSCQ 9
PG+SPS +
Sbjct: 174 PGESPSTK 181


>sp|CMO_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase cofactor-modifying|Pyrococcus

Query: 1 CPGQSPSC 8
C G PSC
Sbjct: 326 CWGNEPSC 333


>sp|MCT_HALHT|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula hispanica (strain ATCC 33960

Query: 1 CPGQSPSCQ 9
C G+SP+ Q
Sbjct: 223 CDGESPTRQ 231


>sp|MCT_HALMA|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 CPGQSPSCQ 9
C G+SP+ Q
Sbjct: 223 CDGESPTRQ 231


>sp|CSA1_THETK|CRISPR-ASSOCIATED exonuclease Csa1|Thermoproteus tenax (strain ATCC 35583

Query: 2 PGQSPSCQK 10
PG +P C K
Sbjct: 260 PGPAPQCPK 268


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 PGQSPSCQ 9
P Q P+C+
Sbjct: 653 PAQDPNCK 660




102|SequenceR|515|506|CQATCCPGQS

>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 2 QATCCP 7
QATCCP
Sbjct: 185 QATCCP 190


>sp|HDRB1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit B1|Methanococcus

Query: 2 QATCCPG 8
QA+CCP
Sbjct: 43 QASCCPA 49


>sp|HDRB1_METJA|COB--COM heterodisulfide reductase subunit B|Methanocaldococcus jannaschii

Query: 2 QATCCPG 8
+A+CCP
Sbjct: 38 KASCCPA 44


>sp|HDRB_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 3 ATCCPG 8
A+CCP
Sbjct: 39 ASCCPA 44


>sp|HDRB2_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit B2|Methanococcus

Query: 3 ATCCPG 8
A+CCP
Sbjct: 39 ASCCPA 44


>sp|HDRB2_METJA|COB--COM heterodisulfide reductase subunit B|Methanocaldococcus jannaschii

Query: 3 ATCCPG 8
A+CCP
Sbjct: 39 ASCCPA 44




103|SequenceR|520|511|KSKFACQATC

>sp|SUI1_NATPD|PROTEIN translation factor SUI1 homolog|Natronomonas pharaonis (strain

Query: 1 KSKFACQAT 9
KSKFAC T
Sbjct: 61 KSKFACGGT 69


>sp|SUI1_HALMA|PROTEIN translation factor SUI1 homolog|Haloarcula marismortui (strain

Query: 1 KSKFACQAT 9
KSKFAC T
Sbjct: 61 KSKFACGGT 69


>sp|SUI1_HALSA|PROTEIN translation factor SUI1 homolog|Halobacterium salinarum (strain

Query: 1 KSKFACQAT 9
KSKFAC T
Sbjct: 61 KSKFACGGT 69


>sp|SUI1_HALS3|PROTEIN translation factor SUI1 homolog|Halobacterium salinarum (strain

Query: 1 KSKFACQAT 9
KSKFAC T
Sbjct: 61 KSKFACGGT 69


>sp|SUI1_METMA|PROTEIN translation factor SUI1 homolog|Methanosarcina mazei (strain ATCC

Query: 1 KSKFACQAT 9
KSKFAC T
Sbjct: 62 KSKFACGGT 70


>sp|SUI1_METBF|PROTEIN translation factor SUI1 homolog|Methanosarcina barkeri (strain

Query: 1 KSKFACQAT 9
KSKFAC T
Sbjct: 62 KSKFACGGT 70


>sp|SUI1_METAC|PROTEIN translation factor SUI1 homolog|Methanosarcina acetivorans

Query: 1 KSKFACQAT 9
KSKFAC T
Sbjct: 62 KSKFACGGT 70


>sp|SUI1_METBU|PROTEIN translation factor SUI1 homolog|Methanococcoides burtonii (strain

Query: 1 KSKFACQAT 9
KSKFAC T
Sbjct: 62 KSKFACGGT 70




104|SequenceR|525|516|RCKESKSKFA

>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 1 RCKESKSKFA 10
RCKESKSKFA
Sbjct: 512 RCKESKSKFA 521




105|SequenceR|530|521|CDSDDRCKES

>sp|PYRH_METM6|URIDYLATE kinase|Methanococcus maripaludis (strain C6 /

Query: 2 DSDDRCKE 9
D D RC E
Sbjct: 148 DKDPRCNE 155


>sp|Y215_METJA|UNCHARACTERIZED protein MJ0215|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CDSDDRCKES 10
C+S RCK +
Sbjct: 8 CESMGRCKHN 17


>sp|GATD_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcoides burtonii (strain DSM

Query: 3 SDDRC 7
SDDRC
Sbjct: 224 SDDRC 228




106|SequenceR|535|526|IGERACDSDD

>sp|Y2347_METMJ|PUTATIVE HTH-type transcriptional regulatory protein|Methanoculleus

Query: 1 IGERACDSD 9
+GERA D+D
Sbjct: 76 VGERARDTD 84


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IGERACD 7
+G+R CD
Sbjct: 633 VGDRECD 639


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 4 RACDSDD 10
R CDSD+
Sbjct: 842 RNCDSDE 848


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 4 RACDSDD 10
R CDSD+
Sbjct: 866 RNCDSDE 872




107|SequenceR|540|531|TFGNCIGERA

>sp|PRIL_METBF|DNA primase large subunit PriL|Methanosarcina barkeri (strain Fusaro /

Query: 1 TFGNCIGE 8
T+GNCIG+
Sbjct: 306 TYGNCIGK 313


>sp|PRIL_METAR|DNA primase large subunit PriL|Methanocella arvoryzae (strain DSM 22066

Query: 1 TFGNCIGE 8
T+GNCIG+
Sbjct: 303 TYGNCIGK 310


>sp|PRIL_METAC|DNA primase large subunit PriL|Methanosarcina acetivorans (strain ATCC

Query: 1 TFGNCIGE 8
T+GNCIG+
Sbjct: 306 TYGNCIGK 313


>sp|PRIL_METMA|DNA primase large subunit PriL|Methanosarcina mazei (strain ATCC

Query: 1 TFGNCIGE 8
T+GNC+G+
Sbjct: 306 TYGNCVGK 313


>sp|PURL_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina barkeri (strain Fusaro /

Query: 2 FGNCIG 7
+GNCIG
Sbjct: 140 YGNCIG 145


>sp|PURL_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Natronomonas pharaonis (strain ATCC 35678

Query: 2 FGNCIG 7
+GNCIG
Sbjct: 148 YGNCIG 153


>sp|PURL_HALLT|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 FGNCIG 7
+GNCIG
Sbjct: 158 YGNCIG 163


>sp|PURL_HALMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloarcula marismortui (strain ATCC 43049

Query: 2 FGNCIG 7
+GNCIG
Sbjct: 146 YGNCIG 151


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FGNCIG 7
+GNCIG
Sbjct: 140 YGNCIG 145


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 1 TFGNCI 6
+FGNCI
Sbjct: 224 SFGNCI 229


>sp|PURL_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FGNCIG 7
+GNCIG
Sbjct: 140 YGNCIG 145


>sp|RL6_METAR|LARGE ribosomal subunit protein uL6|Methanocella arvoryzae (strain DSM

Query: 1 TFGNCIGER 9
T GN +GER
Sbjct: 108 TIGNFLGER 116


>sp|RTCA_METJA|RNA 3'-terminal phosphate cyclase|Methanocaldococcus jannaschii (strain

Query: 3 GNCIGERA 10
G+C+GE+
Sbjct: 246 GSCLGEKG 253


>sp|P936_METJA|PHOSPHODIESTERASE MJ0936|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TFGNCIGER 9
T+GN GER
Sbjct: 56 TYGNNDGER 64


>sp|Y065_METJA|UNCHARACTERIZED protein MJ0065|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TFGNCIGERA 10
TFG + ERA
Sbjct: 88 TFGKIVVERA 97


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 FGNCIGER 9
+GN IGE+
Sbjct: 751 YGNFIGEK 758




108|SequenceR|545|536|APCLATFGNC

>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 3 CLATFGNC 10
CL TFG C
Sbjct: 77 CLCTFGKC 84


>sp|LEUC_SULTO|3-ISOPROPYLMALATE dehydratase large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 APCLATFGNC 10
A C+ T+G C
Sbjct: 346 AGCIVTYGTC 355


>sp|LEUC_SACS2|3-ISOPROPYLMALATE dehydratase large subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 APCLATFGNC 10
A C+ T+G C
Sbjct: 348 AGCIVTYGTC 357


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 3 CLATFGNC 10
CL T+G C
Sbjct: 77 CLCTYGKC 84


>sp|LEUC_PYRNV|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 APCLATFGNC 10
A C+ T+G C
Sbjct: 344 AGCVVTYGTC 353


>sp|LEUC_PYRIL|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 APCLATFGNC 10
A C+ T+G C
Sbjct: 344 AGCVVTYGTC 353


>sp|LEUC_PYRCJ|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum calidifontis (strain DSM

Query: 1 APCLATFGNC 10
A C+ T+G C
Sbjct: 344 AGCVVTYGTC 353


>sp|LEUC_PYRAR|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 APCLATFGNC 10
A C+ T+G C
Sbjct: 344 AGCVVTYGTC 353


>sp|LEUC_PYRAE|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 APCLATFGNC 10
A C+ T+G C
Sbjct: 344 AGCVVTYGTC 353


>sp|LEUC_METS5|3-ISOPROPYLMALATE dehydratase large subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 APCLATFGNC 10
A C+ T+G C
Sbjct: 346 AGCVVTYGTC 355


>sp|LEUC_CALMQ|3-ISOPROPYLMALATE dehydratase large subunit|Caldivirga maquilingensis (strain ATCC

Query: 1 APCLATFGNC 10
A C+ T+G C
Sbjct: 346 AGCVVTYGTC 355


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus

Query: 3 CLATFGNC 10
C+ T+G C
Sbjct: 60 CMCTYGRC 67


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 LATFGN 9
LATFGN
Sbjct: 461 LATFGN 466


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 3 CLATFGNC 10
C TFG C
Sbjct: 73 CYCTFGPC 80


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus

Query: 3 CLATFGNC 10
CL T G C
Sbjct: 69 CLCTMGKC 76


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 CLATFGNC 10
C TFG C
Sbjct: 76 CYCTFGPC 83


>sp|HMDH_SACS2|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 APCLATFGN 9
A CLA GN
Sbjct: 216 ADCLAVSGN 224




109|SequenceR|550|541|PKPDSAPCLA

>sp|GCH1L_HALSA|GTP cyclohydrolase 1 type 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 PKPDSAPCLA 10
P P SAP L+
Sbjct: 139 PDPTSAPALS 148


>sp|HMC1C_METSH|CHROMOSOMAL protein MC1c|Methanothrix soehngenii (Methanosaeta concilii)

Query: 1 PKPDSAP 7
PKP +AP
Sbjct: 61 PKPSNAP 67


>sp|APGM2_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanothermobacter thermautotrophicus

Query: 3 PDSAPCL 9
PD PC+
Sbjct: 351 PDPVPCI 357




110|SequenceR|555|546|CDTFNPKPDS

>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 1 CDTFNPK 7
CD FNP+
Sbjct: 64 CDVFNPE 70


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 1 CDTFNPK 7
CD F PK
Sbjct: 120 CDIFQPK 126


>sp|RSMA_METM7|PROBABLE ribosomal RNA small subunit|Methanococcus maripaludis (strain C7 /

Query: 4 FNPKPD 9
F+PKPD
Sbjct: 166 FSPKPD 171


>sp|RSMA_METVS|PROBABLE ribosomal RNA small subunit|Methanococcus vannielii (strain ATCC

Query: 4 FNPKPD 9
F+PKPD
Sbjct: 166 FSPKPD 171


>sp|Y1331_ARCFU|UNCHARACTERIZED protein AF_1331|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CDTFNPK 7
CD F PK
Sbjct: 298 CDVFYPK 304


>sp|IF2P_METAR|PROBABLE translation initiation factor IF-2|Methanocella arvoryzae (strain

Query: 3 TFNPKPD 9
TFN +PD
Sbjct: 154 TFNSQPD 160


>sp|RSMA_METM6|PROBABLE ribosomal RNA small subunit|Methanococcus maripaludis (strain C6 /

Query: 4 FNPKPD 9
F+PKPD
Sbjct: 166 FSPKPD 171


>sp|RSMA_METM5|PROBABLE ribosomal RNA small subunit|Methanococcus maripaludis (strain C5 /

Query: 4 FNPKPD 9
F+PKPD
Sbjct: 166 FSPKPD 171


>sp|RSMA_METMP|PROBABLE ribosomal RNA small subunit|Methanococcus maripaludis (strain DSM

Query: 4 FNPKPD 9
F+PKPD
Sbjct: 166 FSPKPD 171


>sp|EF1A_PYRIL|ELONGATION factor 1-alpha|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DTFNPKP 8
DTF P P
Sbjct: 229 DTFQPPP 235


>sp|DP2S_THEAC|DNA polymerase II small subunit|Thermoplasma acidophilum (strain ATCC

Query: 4 FNPKP 8
FNPKP
Sbjct: 462 FNPKP 466


>sp|COMC_METJA|L-SULFOLACTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 NPKPD 9
NPKPD
Sbjct: 62 NPKPD 66


>sp|Y1880_METMJ|UNCHARACTERIZED solute-binding protein Memar_1880|Methanoculleus marisnigri (strain

Query: 5 NPKPDS 10
+PKPDS
Sbjct: 212 DPKPDS 217


>sp|EF1A_PYRCJ|ELONGATION factor 1-alpha|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 DTFNPKP 8
DTF P P
Sbjct: 229 DTFQPPP 235


>sp|EF1A_PYRAR|ELONGATION factor 1-alpha|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 DTFNPKP 8
DTF P P
Sbjct: 229 DTFQPPP 235


>sp|SYS_METAC|SERINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 TFNPKP 8
TF PKP
Sbjct: 134 TFTPKP 139


>sp|SYS_METMA|SERINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 TFNPKP 8
TF PKP
Sbjct: 134 TFTPKP 139


>sp|SYS_METBF|SERINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 TFNPKP 8
TF PKP
Sbjct: 134 TFTPKP 139


>sp|COFG_METBU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcoides burtonii (strain DSM 6242

Query: 4 FNPKPDS 10
F PKPD+
Sbjct: 204 FMPKPDT 210


>sp|AROE_HALLT|SHIKIMATE dehydrogenase (NADP(+))|Halorubrum lacusprofundi (strain ATCC

Query: 3 TFNPKPD 9
TF P PD
Sbjct: 35 TFEPAPD 41


>sp|EF1A_META3|ELONGATION factor 1-alpha|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 DTFNP 6
DTFNP
Sbjct: 216 DTFNP 220


>sp|FLPA_THEVO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermoplasma volcanium (strain

Query: 2 DTFNPK 7
+TFNPK
Sbjct: 164 NTFNPK 169




111|SequenceR|560|551|QTHRNCDTFN

>sp|PCCB_HALMT|PROPIONYL-COA carboxylase, carboxyltransferase subunit|Haloferax mediterranei

Query: 4 RNCDTFN 10
R CD+FN
Sbjct: 348 RFCDSFN 354


>sp|TCPA_THEAD|NAD(+) hydrolase TcpA|Theionarchaea archaeon (strain DG-70-1)

Query: 1 QTHRNCDTFN 10
+TH C FN
Sbjct: 96 ETHEKCLDFN 105


>sp|SYH_NATPD|HISTIDINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 THRNCDTFN 10
TH DTF+
Sbjct: 207 THEEADTFD 215




112|SequenceR|565|556|GNICVQTHRN

>sp|RAD50_THEKO|DNA double-strand break repair Rad50|Thermococcus kodakarensis

Query: 1 GNICVQTHRN 10
GN+ Q HRN
Sbjct: 78 GNVKYQIHRN 87


>sp|SPEH_METVS|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus vannielii (strain ATCC

Query: 3 ICVQTHR 9
ICV+TH+
Sbjct: 42 ICVKTHK 48


>sp|SPEH_METMP|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus maripaludis (strain DSM

Query: 3 ICVQTHR 9
ICV+TH+
Sbjct: 42 ICVKTHK 48


>sp|SPEH_METM7|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus maripaludis (strain C7 /

Query: 3 ICVQTHR 9
ICV+TH+
Sbjct: 42 ICVKTHK 48


>sp|SPEH_METM6|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus maripaludis (strain C6 /

Query: 3 ICVQTHR 9
ICV+TH+
Sbjct: 42 ICVKTHK 48


>sp|SPEH_METM5|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus maripaludis (strain C5 /

Query: 3 ICVQTHR 9
ICV+TH+
Sbjct: 42 ICVKTHK 48


>sp|SPEH_METJA|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanocaldococcus jannaschii (strain

Query: 3 ICVQTHR 9
ICV+TH+
Sbjct: 43 ICVRTHK 49


>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GNICVQTHRN 10
G +C + HR+
Sbjct: 462 GTVCTERHRH 471


>sp|DPOL3_SACSH|DNA polymerase 3|Saccharolobus shibatae (strain ATCC 51178

Query: 1 GNICVQTHRN 10
GN CV RN
Sbjct: 30 GNSCVVVERN 39


>sp|RL15E_METTH|LARGE ribosomal subunit protein eL15|Methanothermobacter

Query: 3 ICVQTHR 9
ICV+ HR
Sbjct: 148 ICVKQHR 154


>sp|SPEH_META3|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus aeolicus (strain ATCC

Query: 3 ICVQTHR 9
IC++TH+
Sbjct: 42 ICIRTHK 48


>sp|END3_METJA|ENDONUCLEASE III|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ICVQTH 8
ICV TH
Sbjct: 132 ICVDTH 137


>sp|SYE_METVS|GLUTAMATE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GNICVQTHR 9
G IC TH+
Sbjct: 547 GYICYYTHK 555


>sp|FRHG_METBF|COENZYME F420 hydrogenase subunit gamma|Methanosarcina barkeri (strain

Query: 1 GNICVQTHRN 10
G++C+Q H +
Sbjct: 61 GSVCLQDHES 70




113|SequenceR|570|561|SGACQGNICV

>sp|GLPA1_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A1|Haloferax volcanii

Query: 2 GACQGNIC 9
G CQG IC
Sbjct: 472 GNCQGAIC 479


>sp|TRPA_METVS|TRYPTOPHAN synthase alpha chain|Methanococcus vannielii (strain ATCC 35089

Query: 4 CQGNICV 10
C+G ICV
Sbjct: 189 CKGKICV 195


>sp|TRPA_METMP|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain DSM 14266

Query: 4 CQGNICV 10
C+G ICV
Sbjct: 189 CKGKICV 195


>sp|TRPA_METM7|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C7 /

Query: 4 CQGNICV 10
C+G ICV
Sbjct: 189 CKGKICV 195


>sp|TRPA_METM6|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C6 /

Query: 4 CQGNICV 10
C+G ICV
Sbjct: 189 CKGKICV 195


>sp|TRPA_METM5|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C5 /

Query: 4 CQGNICV 10
C+G ICV
Sbjct: 189 CKGKICV 195


>sp|GLPA2_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A2|Haloferax volcanii

Query: 2 GACQGNIC 9
G CQG C
Sbjct: 469 GNCQGGFC 476


>sp|Y1157_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CQGNIC 9
C GNIC
Sbjct: 323 CSGNIC 328


>sp|MFNA_METMA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina mazei (strain

Query: 2 GACQGNIC 9
G CQ ++C
Sbjct: 87 GLCQSSVC 94


>sp|CG121_METJA|REGULATORY protein Cgi121|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GACQGNICV 10
GA GN+C+
Sbjct: 75 GAKDGNVCL 83


>sp|DP2S_ARCFU|DNA polymerase II small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 3 ACQGNI 8
+CQGN+
Sbjct: 104 SCQGNV 109


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 2 GACQGN 7
GAC GN
Sbjct: 495 GACAGN 500


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 2 GACQGN 7
GAC GN
Sbjct: 620 GACAGN 625


>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 2 GACQGN 7
GAC GN
Sbjct: 497 GACAGN 502


>sp|HMDH_PYRHO|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 ACQGNICV 10
A GN+CV
Sbjct: 228 ALSGNLCV 235


>sp|HMDH_PYRAB|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus abyssi (strain GE5 /

Query: 3 ACQGNICV 10
A GN+CV
Sbjct: 223 ALSGNLCV 230




114|SequenceR|575|566|YKECISGACQ

>sp|EF2_CENSY|ELONGATION factor 2|Cenarchaeum symbiosum (strain A)

Query: 1 YKECISGACQ 10
Y+E +S C+
Sbjct: 464 YRETVSSGCE 473


>sp|Y286_METJA|UNCHARACTERIZED protein MJ0286|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KECISG 7
KEC+SG
Sbjct: 14 KECLSG 19


>sp|SYD_THEVO|ASPARTATE--TRNA(ASP) ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YKECI 5
YKECI
Sbjct: 280 YKECI 284


>sp|RPO3_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum aerophilum (strain ATCC

Query: 1 YKECISG 7
Y++C+SG
Sbjct: 78 YEDCVSG 84


>sp|SYDND_SACS2|ASPARTATE--TRNA(ASP/ASN) ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YKECISGACQ 10
YKE ++GA +
Sbjct: 191 YKELLAGAIE 200


>sp|3MGH_AERPE|PUTATIVE 3-methyladenine DNA glycosylase|Aeropyrum pernix (strain ATCC

Query: 4 CISGAC 9
C SGAC
Sbjct: 29 CASGAC 34




115|SequenceR|580|571|CEELGYKECI

>sp|GLYA_METS3|SERINE hydroxymethyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 CEELGYKE 8
CEELG+ E
Sbjct: 305 CEELGFTE 312


>sp|Y942_SACS2|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 1 CEELGYK 7
CE+LGYK
Sbjct: 282 CEDLGYK 288


>sp|Y1371_SACI2|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 1 CEELGYK 7
CE+LGYK
Sbjct: 282 CEDLGYK 288


>sp|Y1579_SACI1|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 1 CEELGYK 7
CE+LGYK
Sbjct: 282 CEDLGYK 288


>sp|Y1334_SACI3|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 1 CEELGYK 7
CE+LGYK
Sbjct: 282 CEDLGYK 288


>sp|Y1284_SACI4|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 1 CEELGYK 7
CE+LGYK
Sbjct: 282 CEDLGYK 288


>sp|Y1269_SACI7|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 1 CEELGYK 7
CE+LGYK
Sbjct: 282 CEDLGYK 288


>sp|Y1268_SACI6|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 1 CEELGYK 7
CE+LGYK
Sbjct: 282 CEDLGYK 288


>sp|SRP19_PYRAE|SIGNAL recognition particle 19 kDa|Pyrobaculum aerophilum (strain ATCC

Query: 2 EELGYK 7
EELGYK
Sbjct: 45 EELGYK 50


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EELGYKE 8
EEL YKE
Sbjct: 185 EELNYKE 191


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 EELGYKECI 10
+E+G ECI
Sbjct: 1839 DEIGIPECI 1847


>sp|AROB_SULAC|3-DEHYDROQUINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EELGYKE 8
EE+GY E
Sbjct: 270 EEMGYSE 276


>sp|THSA_THEKO|CHAPERONIN subunit alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EELGYKECI 10
E+LGY E +
Sbjct: 342 EDLGYAEVV 350


>sp|THSA_THEK1|CHAPERONIN subunit alpha|Thermococcus sp. (strain JCM 11816

Query: 2 EELGYKECI 10
E+LGY E +
Sbjct: 342 EDLGYAEVV 350


>sp|ILVD_METMJ|DIHYDROXY-ACID dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 EELGYKEC 9
EELG EC
Sbjct: 175 EELGELEC 182


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 EELGYKE 8
E+LGYK+
Sbjct: 6 EQLGYKK 12


>sp|ACDG_METJA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanocaldococcus

Query: 1 CEELGYKECI 10
C++ GY C+
Sbjct: 19 CKKCGYPSCM 28


>sp|PURT_THEKO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Thermococcus

Query: 1 CEELGY 6
CE++GY
Sbjct: 149 CEKIGY 154


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 1 CEELGY 6
CE++GY
Sbjct: 149 CEKIGY 154


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 1 CEELGY 6
CE++GY
Sbjct: 149 CEKIGY 154


>sp|PURT_PYRAB|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus abyssi

Query: 1 CEELGY 6
CE++GY
Sbjct: 149 CEKIGY 154


>sp|THSA_THEK8|CHAPERONIN subunit alpha|Thermococcus sp. (strain KS-8)

Query: 2 EELGYKECI 10
E+LGY E +
Sbjct: 342 EDLGYAEIV 350


>sp|AROA_HALWD|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 CEELGYKE 8
CE + YKE
Sbjct: 333 CEHVRYKE 340


>sp|AROA_HALLT|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 1 CEELGYKE 8
CE + YKE
Sbjct: 351 CEHVRYKE 358


>sp|THSB_AERPE|THERMOSOME subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 2 EELGYKECI 10
E+LGY E +
Sbjct: 349 EDLGYAELV 357


>sp|THSA_SULTO|CHAPERONIN subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EELGYKECI 10
E+LGY E +
Sbjct: 348 EDLGYAELV 356


>sp|THSA_SULAC|CHAPERONIN subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EELGYKECI 10
E+LGY E +
Sbjct: 348 EDLGYAELV 356


>sp|THSA_SACS2|CHAPERONIN subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EELGYKECI 10
E+LGY E +
Sbjct: 347 EDLGYAELV 355


>sp|AROB_SACS2|3-DEHYDROQUINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 CEELGYKE 8
EELGY E
Sbjct: 269 AEELGYAE 276


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 2 EELGYKE 8
++LGYKE
Sbjct: 857 KDLGYKE 863


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 3 ELGYKECI 10
ELGY+E I
Sbjct: 783 ELGYREDI 790


>sp|Y350_THEON|UPF0212 protein TON_0350|Thermococcus onnurineus (strain NA1)

Query: 3 ELGYKEC 9
E+GY +C
Sbjct: 46 EIGYSQC 52


>sp|RS3A_THEON|SMALL ribosomal subunit protein eS1|Thermococcus onnurineus (strain NA1)

Query: 2 EELGYKECI 10
EEL YK+ I
Sbjct: 154 EELNYKDFI 162


>sp|SAT_ARCFU|SULFATE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CEELGYKE 8
C+E+ Y E
Sbjct: 374 CQEIAYSE 381


>sp|Y1486_PYRFU|UPF0212 protein PF1486|Pyrococcus furiosus (strain ATCC 43587

Query: 3 ELGYKEC 9
ELGY +C
Sbjct: 46 ELGYSQC 52


>sp|MCH_METBU|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcoides burtonii (strain DSM 6242

Query: 2 EELGYKE 8
EE+GYK+
Sbjct: 124 EEIGYKD 130


>sp|CBIN_METJA|COBALT transport protein CbiN|Methanocaldococcus jannaschii (strain ATCC

Query: 1 CEELGYK 7
EELGYK
Sbjct: 44 VEELGYK 50


>sp|Y1358_THESM|UPF0212 protein TSIB_1358|Thermococcus sibiricus (strain DSM 12597

Query: 3 ELGYKEC 9
E+GY +C
Sbjct: 46 EIGYSQC 52




116|SequenceR|585|576|SSACTCEELG

>sp|Y1332_METJA|UNCHARACTERIZED GTP-binding protein MJ1332|Methanocaldococcus jannaschii (strain

Query: 1 SSACTCEELG 10
+S C C+ELG
Sbjct: 46 TSPCPCKELG 55


>sp|SYE_METTM|GLUTAMATE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 ACTCEELG 10
AC C +LG
Sbjct: 206 ACHCRDLG 213


>sp|ARTD_METJA|PROBABLE archaeosortase D|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SSACTC 6
SS CTC
Sbjct: 61 SSPCTC 66


>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 ACTCEEL 9
AC C EL
Sbjct: 211 ACPCREL 217


>sp|GGGPS_PYRHO|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 ACTCEELG 10
A CEELG
Sbjct: 41 ARVCEELG 48


>sp|SYE_META3|GLUTAMATE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 CTCEELG 10
C C +LG
Sbjct: 211 CVCRDLG 217




117|SequenceR|590|581|DDKGDSSACT

>sp|RNZ_AERPE|RIBONUCLEASE Z|Aeropyrum pernix (strain ATCC 700893

Query: 4 GDSSACT 10
GD+S CT
Sbjct: 214 GDTSPCT 220


>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 1 DDKGDSSACT 10
DDKGD T
Sbjct: 535 DDKGDDITVT 544




118|SequenceR|595|586|HCLEKDDKGD

>sp|Y949_METTH|UPF0216 protein MTH_949|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 LEKDDKGD 10
LE+DD+GD
Sbjct: 99 LERDDEGD 106


>sp|CSM4_METJA|CRISPR system Cms protein Csm4|Methanocaldococcus jannaschii (strain ATCC

Query: 2 CLEKDDKG 9
LEKDDKG
Sbjct: 181 TLEKDDKG 188


>sp|CMR4_PYRFU|CRISPR system Cmr endoribonuclease Cmr4|Pyrococcus furiosus (strain ATCC

Query: 3 LEKDDKG 9
++KDDKG
Sbjct: 157 IQKDDKG 163


>sp|RSMA_SACS2|PROBABLE ribosomal RNA small subunit|Saccharolobus solfataricus (strain

Query: 2 CLEKDDK 8
C+E DDK
Sbjct: 27 CIELDDK 33


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 1 HCLEKDD 7
H L+KDD
Sbjct: 606 HILQKDD 612


>sp|Y35K_HALSI|UNCHARACTERIZED 36 kDa protein|Halobacterium salinarum (Halobacterium halobium)

Query: 4 EKDDKGD 10
E+DD+GD
Sbjct: 268 EEDDEGD 274


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 3 LEKDDKGD 10
+E+DDKG+
Sbjct: 339 VERDDKGN 346


>sp|TREZ_SACS2|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LEKDDKG 9
+E+DDKG
Sbjct: 36 MERDDKG 42


>sp|FPRA_METTM|COENZYME F420H(2) oxidase|Methanothermobacter marburgensis (strain ATCC

Query: 1 HCLEKDDKGD 10
+CL +DD+ +
Sbjct: 291 YCLHEDDRSE 300


>sp|PELO_SACS2|PROTEIN pelota homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LEKDDK 8
LEKDDK
Sbjct: 30 LEKDDK 35


>sp|MOAA_METS5|PROBABLE GTP 3',8-cyclase|Metallosphaera sedula (strain ATCC 51363

Query: 2 CLEKDDK 8
CL +DDK
Sbjct: 263 CLYRDDK 269


>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 5 KDDKGD 10
+DDKGD
Sbjct: 534 EDDKGD 539


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 CLEKDDKGD 10
C+E+D GD
Sbjct: 228 CMERDPDGD 236


>sp|MOAC_PYRHO|PROBABLE cyclic pyranopterin monophosphate synthase|Pyrococcus horikoshii

Query: 3 LEKDDKG 9
+EKD+KG
Sbjct: 131 VEKDEKG 137




119|SequenceR|600|591|KMCCVHCLEK

>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 3 CCVHCLE 9
C VHCLE
Sbjct: 96 CYVHCLE 102


>sp|PRIS_METJA|DNA primase small subunit PriS|Methanocaldococcus jannaschii (strain

Query: 4 CVHCLEK 10
C HCLE+
Sbjct: 114 CKHCLEE 120


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 4 CVHCLE 9
CVHCL+
Sbjct: 413 CVHCLK 418


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 1 KMCCVHC 7
+M C HC
Sbjct: 144 RMVCPHC 150


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 1 KMCCVHC 7
+M C HC
Sbjct: 147 RMVCPHC 153


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KMCCVHCLEK 10
+M C+ C EK
Sbjct: 1063 RMRCIKCGEK 1072


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 KMCCVHCLEK 10
+M C+ C EK
Sbjct: 1056 RMRCIKCGEK 1065


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 3 CCVHCL 8
CCVH +
Sbjct: 582 CCVHAV 587


>sp|DSRA_ARCFU|SULFITE reductase, dissimilatory-type subunit alpha|Archaeoglobus fulgidus

Query: 4 CVHCLEK 10
C+HC+ K
Sbjct: 289 CMHCINK 295


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 3 CCVH 6
CCVH
Sbjct: 566 CCVH 569


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 3 CCVH 6
CCVH
Sbjct: 565 CCVH 568


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 4 CVHCLEK 10
C HC EK
Sbjct: 146 CPHCNEK 152


>sp|ABLA_METMP|L-LYSINE 2,3-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 2 MCCVHCLEK 10
M C HC K
Sbjct: 138 MYCRHCTRK 146




120|SequenceR|605|596|SPDMKKMCCV

***** No hits found ******


121|SequenceR|610|601|TSACTSPDMK

>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 4 CTSPDM 9
CT+PDM
Sbjct: 522 CTTPDM 527


>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 4 CTSPDMK 10
C++PDM+
Sbjct: 553 CSTPDMR 559


>sp|HELS_METMA|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 CTSPDMK 10
C++PDM+
Sbjct: 528 CSTPDMR 534


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 CTSPDMK 10
C++PDM+
Sbjct: 528 CSTPDMR 534


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 4 CTSPDMK 10
C++PDM+
Sbjct: 527 CSTPDMR 533


>sp|RFRNP_METKA|RNA-FREE ribonuclease P|Methanopyrus kandleri (strain AV19 /

Query: 3 ACTSPDM 9
AC+ PDM
Sbjct: 209 ACSFPDM 215


>sp|MFNA_METST|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaera stadtmanae

Query: 2 SACTSPD 8
S CT PD
Sbjct: 33 SMCTKPD 39


>sp|CBID_METMJ|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanoculleus marisnigri (strain ATCC

Query: 2 SACTSPDM 9
+AC SPD+
Sbjct: 16 AACRSPDL 23


>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 4 CTSPDMK 10
C++PD+K
Sbjct: 535 CSTPDVK 541


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 4 CTSPDMK 10
CT+PD K
Sbjct: 647 CTNPDCK 653


>sp|TRPA_METB6|TRYPTOPHAN synthase alpha chain|Methanoregula boonei (strain DSM 21154

Query: 2 SACTSPD 8
++CT+PD
Sbjct: 71 ASCTTPD 77




122|SequenceR|615|606|WQVSGTSACT

>sp|NNR_METKA|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanopyrus kandleri (strain

Query: 1 WQVSGTSACT 10
W V+GT A T
Sbjct: 412 WNVTGTPAMT 421


>sp|LPLA_AERPE|PUTATIVE lipoate-protein ligase A|Aeropyrum pernix (strain ATCC 700893

Query: 1 WQVSGTSA 8
W+VSG++A
Sbjct: 129 WKVSGSAA 136


>sp|ARGC_METKA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanopyrus kandleri (strain AV19 /

Query: 1 WQVSGTSAC 9
W V GT+ C
Sbjct: 283 WAVRGTNYC 291


>sp|DP2S_METJA|DNA polymerase II small subunit|Methanocaldococcus jannaschii (strain

Query: 3 VSGTSACT 10
VSG S CT
Sbjct: 185 VSGKSTCT 192


>sp|RLMH_METB6|PUTATIVE ribosomal RNA large subunit|Methanoregula boonei (strain DSM 21154

Query: 1 WQVSGTS 7
WQ++GT+
Sbjct: 95 WQLAGTN 101




123|SequenceR|620|611|SFHRSWQVSG

>sp|TYSY_METKA|PUTATIVE thymidylate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 SFHRSWQV 8
+F+RSW V
Sbjct: 155 AFYRSWDV 162


>sp|ARLY_PYRAR|ARGININOSUCCINATE lyase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 SFHRSW 6
SF+RSW
Sbjct: 2 SFYRSW 7


>sp|ARLY_PYRIL|ARGININOSUCCINATE lyase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 SFHRSW 6
SF+RSW
Sbjct: 2 SFYRSW 7


>sp|ARLY_PYRAE|ARGININOSUCCINATE lyase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SFHRSW 6
SF+RSW
Sbjct: 2 SFYRSW 7


>sp|ARLY_PYRNV|ARGININOSUCCINATE lyase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 SFHRSW 6
SF+RSW
Sbjct: 2 SFYRSW 7


>sp|PURT_METVS|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus vannielii

Query: 2 FHRSWQ 7
+H SWQ
Sbjct: 228 YHESWQ 233


>sp|PURT_METMP|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 2 FHRSWQ 7
+H SWQ
Sbjct: 228 YHESWQ 233


>sp|PURT_METM7|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 2 FHRSWQ 7
+H SWQ
Sbjct: 228 YHESWQ 233


>sp|PURT_METM5|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 2 FHRSWQ 7
+H SWQ
Sbjct: 228 YHESWQ 233


>sp|PURT_METJA|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocaldococcus

Query: 2 FHRSWQ 7
+H SWQ
Sbjct: 229 YHESWQ 234


>sp|OTC_METHJ|ORNITHINE carbamoyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 HRSWQVS 9
HR+W+++
Sbjct: 265 HRNWEIT 271


>sp|EF2_THEVO|ELONGATION factor 2|Thermoplasma volcanium (strain ATCC 51530

Query: 2 FHRSWQVS 9
F + WQVS
Sbjct: 187 FTKEWQVS 194


>sp|EF2_THEAC|ELONGATION factor 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 FHRSWQVS 9
F + WQVS
Sbjct: 187 FTKEWQVS 194


>sp|KTHY_METBF|PROBABLE thymidylate kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 FHRSWQV 8
HRSW +
Sbjct: 120 LHRSWTI 126


>sp|QUEE_HALS3|7-CARBOXY-7-DEAZAGUANINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 SFHRSWQ 7
S+H SW+
Sbjct: 57 SYHTSWE 63


>sp|Y1185_METJA|UNCHARACTERIZED protein MJ1185|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FHRSW 6
FHR W
Sbjct: 523 FHRKW 527


>sp|PURT_THEKO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Thermococcus

Query: 2 FHRSWQ 7
+H SWQ
Sbjct: 239 YHSSWQ 244


>sp|PURT_PYRAB|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus abyssi

Query: 2 FHRSWQ 7
+H SWQ
Sbjct: 239 YHASWQ 244


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 2 FHRSWQ 7
+H SWQ
Sbjct: 239 YHASWQ 244


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FHRSW 6
FHR W
Sbjct: 551 FHRGW 555


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 2 FHRSWQ 7
+H SWQ
Sbjct: 239 YHASWQ 244


>sp|KDPA_HALSA|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 1 SFHRSWQVSG 10
S H SW G
Sbjct: 372 SMHNSWTALG 381


>sp|KDPA_HALS3|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 1 SFHRSWQVSG 10
S H SW G
Sbjct: 372 SMHNSWTALG 381




124|SequenceR|625|616|TITRGSFHRS

***** No hits found ******


125|SequenceR|630|621|SGPQLTITRG

>sp|ACDB2_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 2 GPQLTITRG 10
GPQ IT+G
Sbjct: 229 GPQFEITKG 237


>sp|PYRC_METTH|DIHYDROOROTASE thermautotrophicus (strain ATCC 29096

Query: 2 GPQLTITRG 10
GP +TI RG
Sbjct: 395 GPVMTIVRG 403


>sp|HEM1_ARCFU|GLUTAMYL-TRNA reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SGPQLTITRG 10
S P ITRG
Sbjct: 239 SAPHAVITRG 248


>sp|ACYP_ARCFU|ACYLPHOSPHATASE fulgidus (strain ATCC 49558

Query: 1 SGPQLTITRG 10
SGP L RG
Sbjct: 62 SGPPLATVRG 71


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 1 SGPQLTITRG 10
SG ++TIT G
Sbjct: 578 SGRKITITEG 587


>sp|RS3_HYPBU|SMALL ribosomal subunit protein uS3|Hyperthermus butylicus (strain DSM

Query: 1 SGPQLTITR 9
S PQ+T+ R
Sbjct: 77 SNPQITVRR 85


>sp|RL13_SULTO|LARGE ribosomal subunit protein uL13|Sulfurisphaera tokodaii (strain

Query: 1 SGPQLTITRG 10
SGP+ + RG
Sbjct: 43 SGPRARVVRG 52




126|SequenceR|635|626|FDNCPSGPQL

>sp|DNAG_METHJ|DNA primase DnaG|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DNCPSGPQL 10
DN P+GP +
Sbjct: 158 DNVPAGPNV 166


>sp|DNAG_METTP|DNA primase DnaG|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 DNCPSGPQL 10
DN P+GP +
Sbjct: 159 DNLPAGPNV 167


>sp|DNAG_METAR|DNA primase DnaG|Methanocella arvoryzae (strain DSM 22066

Query: 2 DNCPSGPQL 10
DN P+GP +
Sbjct: 157 DNLPAGPNV 165


>sp|DNAG_METST|DNA primase DnaG|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DNCPSGP 8
DN P+GP
Sbjct: 161 DNLPAGP 167


>sp|Y586_ARCFU|UNCHARACTERIZED protein AF_0586|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FDNCPS 6
FD CPS
Sbjct: 86 FDGCPS 91


>sp|TRUD_PYRAR|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum arsenaticum (strain DSM

Query: 2 DNCPSG 7
D CPSG
Sbjct: 19 DTCPSG 24


>sp|TRUD_PYRAE|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum aerophilum (strain ATCC

Query: 2 DNCPSG 7
D CPSG
Sbjct: 19 DTCPSG 24


>sp|PYRC_METJA|DIHYDROOROTASE jannaschii (strain ATCC 43067

Query: 3 NCPSG 7
NCPSG
Sbjct: 317 NCPSG 321


>sp|AROC_METTP|CHORISMATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 DNCPSGPQL 10
D CP+G +L
Sbjct: 29 DGCPAGIEL 37


>sp|FER7_METJA|UNCHARACTERIZED ferredoxin MJ0722|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FDNCPSGP 8
+D CP GP
Sbjct: 19 YDVCPKGP 26


>sp|Y1656_METJA|UNCHARACTERIZED protein MJ1656|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FDN-CPSGPQL 10
FD CP GP++
Sbjct: 141 FDTFCPIGPRI 151


>sp|AROC_METTH|CHORISMATE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 DNCPSGPQL 10
D CP+G +L
Sbjct: 35 DGCPAGLEL 43


>sp|Y818_METJA|UNCHARACTERIZED protein MJ0818|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NCPSGPQL 10
NCP G +L
Sbjct: 166 NCPYGKRL 173


>sp|PYRC_SULAC|DIHYDROOROTASE acidocaldarius (strain ATCC 33909

Query: 1 FDNCPSG 7
FD CP G
Sbjct: 269 FDLCPPG 275


>sp|AROC_METST|CHORISMATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DNCPSGPQL 10
D CP+G L
Sbjct: 28 DGCPAGLNL 36


>sp|DPO4_METMJ|DNA polymerase IV|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FDNCPSGPQL 10
FD CP G L
Sbjct: 70 FDLCPHGVYL 79


>sp|G3P_NATPD|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DNCPSG 7
D CPSG
Sbjct: 85 DACPSG 90




127|SequenceR|640|631|DCYGRFDNCP

>sp|FDHB_METJA|F420-DEPENDENT formate dehydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 2 CYGRFDNCP 10
CYG DNCP
Sbjct: 283 CYGCRDNCP 291


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain

Query: 1 DCYGRFDNCP 10
+C G+ D CP
Sbjct: 3 ECDGKCDTCP 12


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain

Query: 2 CYGRFDNCP 10
C G+ D CP
Sbjct: 63 CGGKVDECP 71


>sp|AROC_THEKO|CHORISMATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 GRFDNC 9
GRFD+C
Sbjct: 318 GRFDSC 323


>sp|AROC_THEGJ|CHORISMATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 GRFDNC 9
GRFD+C
Sbjct: 319 GRFDSC 324


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 2 CYGRFDNCP 10
C GR CP
Sbjct: 65 CSGRVGTCP 73


>sp|GSA_HALWD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 RFDNCP 10
R+D+CP
Sbjct: 382 RYDDCP 387


>sp|CBID_METKA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 DCYGRFD 7
+C+GR+D
Sbjct: 255 NCHGRYD 261


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii

Query: 2 CYGRFDNCP 10
C GR CP
Sbjct: 65 CGGRIGECP 73


>sp|HEM1_META3|GLUTAMYL-TRNA reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 YGRFDNC 9
Y ++DNC
Sbjct: 27 YKKYDNC 33


>sp|ARLY_NATPD|ARGININOSUCCINATE lyase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DCYGRFDNCP 10
D YGR + P
Sbjct: 186 DAYGRINRSP 195


>sp|ARLY_METBF|ARGININOSUCCINATE lyase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DCYGRFDNCP 10
D Y R + CP
Sbjct: 184 DAYSRVNLCP 193


>sp|HEM1_METVS|GLUTAMYL-TRNA reductase|Methanococcus vannielii (strain ATCC 35089

Query: 3 YGRFDNC 9
YG++D C
Sbjct: 27 YGKYDAC 33


>sp|GSA_HALLT|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 DCYGRFDNCP 10
DC R+D CP
Sbjct: 378 DC-DRYDTCP 386


>sp|PRIL_ARCFU|DNA primase large subunit PriL|Archaeoglobus fulgidus (strain ATCC

Query: 2 CYGRFDNC 9
C G F+NC
Sbjct: 88 CMGCFENC 95


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 CYGRFDNCP 10
CYG D CP
Sbjct: 289 CYGCRDVCP 297


>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 2 CYGRFDNCP 10
CYG D CP
Sbjct: 283 CYGCRDVCP 291


>sp|Y2332_ARCFU|UNCHARACTERIZED protein AF_2332|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CYGRFD 7
CYG FD
Sbjct: 95 CYGGFD 100


>sp|GAD_PICTO|D-GLUCONATE/D-GALACTONATE dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 1 DCYGRF 6
+C+GRF
Sbjct: 198 ECHGRF 203


>sp|HDRC2_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 2 CYGRFDNCP 10
CY ++ CP
Sbjct: 82 CYTCYERCP 90


>sp|HDRC2_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit C2|Methanococcus

Query: 2 CYGRFDNCP 10
CY ++ CP
Sbjct: 80 CYTCYERCP 88


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DCYGRFDNC 9
D YG F+ C
Sbjct: 462 DWYGSFEIC 470


>sp|HDRC_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus

Query: 2 CYGRFDNCP 10
CY ++ CP
Sbjct: 88 CYTCYERCP 96


>sp|HDRC1_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 2 CYGRFDNCP 10
CY ++ CP
Sbjct: 82 CYECYERCP 90


>sp|FDHB_METFO|F420-DEPENDENT formate dehydrogenase subunit beta|Methanobacterium formicicum

Query: 2 CYGRFDNCP 10
CYG + CP
Sbjct: 299 CYGCREACP 307


>sp|HDRC1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit C1|Methanococcus

Query: 2 CYGRFDNCP 10
CY ++ CP
Sbjct: 80 CYECYEKCP 88




128|SequenceR|645|636|CRMFVDCYGR

>sp|Y2336_PYRAR|UPF0179 protein Pars_2336|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 CRMFVDCYGR 10
CR+F C GR
Sbjct: 31 CRLFSVCLGR 40


>sp|HIS3_METMJ|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 CRMFVDC 7
CR+ VDC
Sbjct: 66 CRILVDC 72


>sp|PORA_METTH|PYRUVATE synthase subunit PorA|Methanothermobacter thermautotrophicus

Query: 1 CRMFVDCYGR 10
CR F + +GR
Sbjct: 238 CREFSEMFGR 247


>sp|PRIS_SACI2|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 5 VDCYG 9
VDCYG
Sbjct: 182 VDCYG 186


>sp|PRIS_SACI1|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 5 VDCYG 9
VDCYG
Sbjct: 182 VDCYG 186


>sp|PRIS_SACS2|DNA primase small subunit PriS|Saccharolobus solfataricus (strain ATCC

Query: 5 VDCYG 9
VDCYG
Sbjct: 182 VDCYG 186


>sp|PRIS_SACI4|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.14.25

Query: 5 VDCYG 9
VDCYG
Sbjct: 182 VDCYG 186


>sp|PRIS_SACI3|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 5 VDCYG 9
VDCYG
Sbjct: 182 VDCYG 186


>sp|PRIS_SACI7|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 5 VDCYG 9
VDCYG
Sbjct: 182 VDCYG 186


>sp|PRIS_SACI6|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.16.4

Query: 5 VDCYG 9
VDCYG
Sbjct: 182 VDCYG 186


>sp|MUTL_HALSA|DNA mismatch repair protein MutL|Halobacterium salinarum (strain ATCC

Query: 3 MFVDCYG 9
+FVDC G
Sbjct: 291 LFVDCEG 297


>sp|MUTL_HALS3|DNA mismatch repair protein MutL|Halobacterium salinarum (strain ATCC

Query: 3 MFVDCYG 9
+FVDC G
Sbjct: 291 LFVDCEG 297


>sp|METK_METKA|S-ADENOSYLMETHIONINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 CRMFVDCYGR 10
CR +++ +GR
Sbjct: 47 CREYIERFGR 56


>sp|ALAXM_METAC|ALANYL-TRNA editing protein AlaX-M|Methanosarcina acetivorans (strain ATCC

Query: 4 FVDCYGR 10
F+DCY R
Sbjct: 7 FLDCYLR 13


>sp|HPCAL_NITMS|3-HYDROXYPROPIONATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 2 RMFVDCYGR 10
+ F D YGR
Sbjct: 88 KTFTDMYGR 96


>sp|Y342_METJA|UNCHARACTERIZED protein MJ0342|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FVDCYG 9
F DCYG
Sbjct: 73 FPDCYG 78


>sp|SYT_THEPD|THREONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 RMFVDCYG 9
R V+CYG
Sbjct: 120 RFSVECYG 127


>sp|Y2106_PYRCJ|UPF0179 protein Pcal_2106|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 CRMFVDCYGR 10
CR++ C GR
Sbjct: 31 CRLYSVCLGR 40


>sp|TMPS_METJA|THYMIDYLATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CRMFVDCY 8
CR+ DCY
Sbjct: 44 CRICDDCY 51


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain ATCC

Query: 1 CRMFVDCYGR 10
C VD +GR
Sbjct: 220 CNKVVDIFGR 229


>sp|Y1978_PYRNV|UPF0179 protein Tneu_1978|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 CRMFVDCYGR 10
CR++ C GR
Sbjct: 31 CRLYPVCMGR 40


>sp|YPV4_METTF|UNCHARACTERIZED protein ORF4|Methanothermobacter thermautotrophicus

Query: 3 MFVDCYG 9
+F+DC G
Sbjct: 191 IFIDCVG 197


>sp|Y681_PYRAE|UPF0179 protein PAE0681|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 CRMFVDCYGR 10
CR++ C GR
Sbjct: 31 CRLYPVCMGR 40




129|SequenceR|650|641|ADVLRCRMFV

***** No hits found ******


130|SequenceR|655|646|ALPGDADVLR

>sp|Y1032_METJA|UNCHARACTERIZED protein MJ1032|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ALPGDADV 8
A PGD+DV
Sbjct: 46 ADPGDSDV 53


>sp|COBS1_ARCFU|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GDADVLR 10
GD DVLR
Sbjct: 20 GDVDVLR 26


>sp|URIC_HALJB|URICASE jeotgali (strain DSM 18796

Query: 2 LPGDADVLR 10
L GDA VLR
Sbjct: 277 LDGDAKVLR 285


>sp|CIMA_METMJ|PUTATIVE (R)-citramalate synthase CimA|Methanoculleus marisnigri (strain

Query: 1 ALPGDADV 8
ALPGD D+
Sbjct: 80 ALPGDIDL 87


>sp|CBIT_HALSA|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 LPGDADVL 9
LP DAD L
Sbjct: 93 LPADADAL 100


>sp|URIC_HALVD|URICASE volcanii (strain ATCC 29605

Query: 2 LPGDADVLR 10
L GDA VLR
Sbjct: 279 LDGDASVLR 287




131|SequenceR|660|651|AKKLRALPGD

>sp|RPO12_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo12|Sulfurisphaera tokodaii (strain DSM

Query: 2 KKLRALPG 9
++LRALPG
Sbjct: 16 EQLRALPG 23


>sp|CIMA_METMJ|PUTATIVE (R)-citramalate synthase CimA|Methanoculleus marisnigri (strain

Query: 4 LRALPGD 10
+RALPGD
Sbjct: 78 VRALPGD 84


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 AKKLRALPGD 10
AKKLRA+ D
Sbjct: 959 AKKLRAVDAD 968


>sp|TRUD_THEAC|PROBABLE tRNA pseudouridine synthase D|Thermoplasma acidophilum (strain ATCC

Query: 5 RALPGD 10
RA+PGD
Sbjct: 273 RAIPGD 278


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KKLRALPG 9
K+LR LPG
Sbjct: 544 KRLRELPG 551


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 1 AKKLRALPG 9
A K+R LPG
Sbjct: 432 AHKVRVLPG 440


>sp|PURP_PYRCJ|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum calidifontis (strain DSM

Query: 1 AKKLRALPGD 10
AK+++A+ GD
Sbjct: 165 AKRIKAVEGD 174


>sp|RSMA_PYRFU|PROBABLE ribosomal RNA small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AKKLRALPGD 10
AK++ A PGD
Sbjct: 140 AKRMVAKPGD 149


>sp|TRM1_METMJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoculleus marisnigri

Query: 1 AKKLRALPG 9
AK+LR PG
Sbjct: 321 AKRLRVSPG 329


>sp|LEU3_ARCFU|3-ISOPROPYLMALATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KKLRALPGD 10
KK+ +PGD
Sbjct: 2 KKIVVIPGD 10


>sp|MCRZ_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KKLRALPGD 10
KKLR +P D
Sbjct: 29 KKLRDIPDD 37


>sp|RPIA_THEVO|RIBOSE-5-PHOSPHATE isomerase A|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KKLRALPG 9
KK++++PG
Sbjct: 193 KKIKSIPG 200




132|SequenceR|665|656|EPSFIAKKLR

>sp|MEND_HALSA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 EPSFIAKKLR 10
EP A+KLR
Sbjct: 138 EPEVTARKLR 147


>sp|MEND_HALS3|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 EPSFIAKKLR 10
EP A+KLR
Sbjct: 138 EPEVTARKLR 147


>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 1 EPSFIAKKLR 10
EP+ AKK+R
Sbjct: 83 EPTETAKKIR 92


>sp|Y006_METJA|UNCHARACTERIZED oxidoreductase MJ0006|Methanocaldococcus jannaschii (strain ATCC

Query: 3 SFIAKKLR 10
SFIA+KL+
Sbjct: 80 SFIAEKLK 87


>sp|AMPPA_THEPD|AMP phosphorylase|Thermofilum pendens (strain DSM 2475

Query: 2 PSFIAKKL 9
PS +AKKL
Sbjct: 261 PSILAKKL 268


>sp|MDH_SACS2|MALATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 SFIAKKLR 10
S+IAKKL+
Sbjct: 151 SYIAKKLK 158




133|SequenceR|670|661|INEYLEPSFI

>sp|AATF_METAR|A-TYPE ATP synthase subunit F|Methanocella arvoryzae (strain DSM 22066

Query: 1 INEYLEPSFI 10
I+E +EP+FI
Sbjct: 66 IDESVEPTFI 75


>sp|SYFA_HALSA|PHENYLALANINE--TRNA ligase alpha subunit|Halobacterium salinarum (strain ATCC 700922

Query: 2 NEYLEPSF 9
N Y EPSF
Sbjct: 420 NPYTEPSF 427


>sp|SYFA_HALS3|PHENYLALANINE--TRNA ligase alpha subunit|Halobacterium salinarum (strain ATCC 29341

Query: 2 NEYLEPSF 9
N Y EPSF
Sbjct: 420 NPYTEPSF 427


>sp|Y2132_NATPD|UPF0173 metal-dependent hydrolase NP_2132A|Natronomonas pharaonis (strain

Query: 1 INEYLEPSF 9
I YLEP F
Sbjct: 162 IGPYLEPDF 170


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 INEYLEPSF 9
IN+YLE +F
Sbjct: 483 INDYLEKTF 491


>sp|GPMI_NATPD|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 NEYLEPSFI 10
+EY+EP+ +
Sbjct: 227 DEYVEPTLV 235


>sp|DSRA_ARCFU|SULFITE reductase, dissimilatory-type subunit alpha|Archaeoglobus fulgidus

Query: 2 NEYLEPSF 9
+EYL+P F
Sbjct: 144 SEYLQPCF 151


>sp|AATC_HALSA|A-TYPE ATP synthase subunit C|Halobacterium salinarum (strain ATCC 700922

Query: 2 NEYLEPSF 9
+ YLEP+F
Sbjct: 158 DTYLEPAF 165


>sp|AATC_HALS3|A-TYPE ATP synthase subunit C|Halobacterium salinarum (strain ATCC 29341

Query: 2 NEYLEPSF 9
+ YLEP+F
Sbjct: 158 DTYLEPAF 165


>sp|RS2_METMJ|SMALL ribosomal subunit protein uS2|Methanoculleus marisnigri (strain

Query: 1 INEYLEPSFI 10
+N+Y+EP +
Sbjct: 117 LNKYIEPDVV 126


>sp|ADEC_METJA|ADENINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EYLEPSFI 10
+YL P+FI
Sbjct: 57 KYLSPTFI 64


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 INEYLE 6
INEYLE
Sbjct: 740 INEYLE 745


>sp|GATE_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfolobus acidocaldarius (strain ATCC

Query: 1 INEYLEPSF 9
+ YL PSF
Sbjct: 43 LQRYLRPSF 51


>sp|GATE_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfurisphaera tokodaii (strain DSM

Query: 1 INEYLEPSF 9
+ YL PSF
Sbjct: 43 LERYLRPSF 51


>sp|Y053_NANEQ|UNCHARACTERIZED RNA methyltransferase NEQ053|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 INEYLEPS 8
+ E+LEPS
Sbjct: 297 VKEFLEPS 304




134|SequenceR|675|666|VIWEAINEYL

>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 2 IWEAINEY 9
+W+AIN+Y
Sbjct: 269 VWDAINKY 276


>sp|RL4_THESM|LARGE ribosomal subunit protein uL4|Thermococcus sibiricus (strain DSM

Query: 1 VIWEAINE 8
VIWE IN+
Sbjct: 100 VIWEGINK 107


>sp|RL4_PYRHO|LARGE ribosomal subunit protein uL4|Pyrococcus horikoshii (strain ATCC

Query: 1 VIWEAINE 8
+IWE IN+
Sbjct: 100 IIWEGINK 107


>sp|RL4_PYRAB|LARGE ribosomal subunit protein uL4|Pyrococcus abyssi (strain GE5 /

Query: 1 VIWEAINE 8
+IWE IN+
Sbjct: 100 IIWEGINK 107


>sp|GVPD_HALMT|PROTEIN GvpD|Haloferax mediterranei (strain ATCC 33500

Query: 3 WEAINEYL 10
WE I EYL
Sbjct: 137 WELIYEYL 144


>sp|GVPD1_HALSA|PROTEIN GvpD1|Halobacterium salinarum (strain ATCC 700922

Query: 3 WEAINEYL 10
WE I EYL
Sbjct: 137 WELIYEYL 144


>sp|RL4_THEON|LARGE ribosomal subunit protein uL4|Thermococcus onnurineus (strain NA1)

Query: 1 VIWEAINE 8
+IWE IN+
Sbjct: 100 IIWEDINK 107


>sp|RL4_THEKO|LARGE ribosomal subunit protein uL4|Thermococcus kodakarensis (strain

Query: 1 VIWEAINE 8
+IWE IN+
Sbjct: 100 IIWEDINK 107


>sp|RL4_THEGJ|LARGE ribosomal subunit protein uL4|Thermococcus gammatolerans (strain

Query: 1 VIWEAINE 8
+IWE IN+
Sbjct: 100 IIWEDINK 107


>sp|RL4_PYRFU|LARGE ribosomal subunit protein uL4|Pyrococcus furiosus (strain ATCC

Query: 1 VIWEAINE 8
+IWE IN+
Sbjct: 100 IIWEDINK 107


>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IWEAIN 7
IW+AIN
Sbjct: 91 IWDAIN 96


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 2 IWEAIN 7
IW+AIN
Sbjct: 91 IWDAIN 96


>sp|MTMB2_METBF|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri (strain Fusaro /

Query: 2 IWEAIN 7
IW+AIN
Sbjct: 91 IWDAIN 96


>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 2 IWEAIN 7
IW+AIN
Sbjct: 91 IWDAIN 96


>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 2 IWEAIN 7
IW+AIN
Sbjct: 91 IWDAIN 96


>sp|MTMB1_METBF|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri (strain Fusaro /

Query: 2 IWEAIN 7
IW+AIN
Sbjct: 91 IWDAIN 96


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 2 IWEAIN 7
IW+AIN
Sbjct: 91 IWDAIN 96


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 2 IWEAIN 7
IW+AIN
Sbjct: 91 IWDAIN 96


>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IWEAINEY 9
I+EAI EY
Sbjct: 336 IYEAIKEY 343


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 IWEAINEY 9
I+EAI EY
Sbjct: 336 IYEAIKEY 343


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 IWEAINEY 9
I+EAI EY
Sbjct: 336 IYEAIKEY 343


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 IWEAINEY 9
I+EAI EY
Sbjct: 336 IYEAIKEY 343


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 IWEAINEY 9
I+EAI EY
Sbjct: 336 IYEAIKEY 343


>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 IWEAINEY 9
I+EAI EY
Sbjct: 336 IYEAIKEY 343


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 IWEAINEY 9
I+EAI EY
Sbjct: 336 IYEAIKEY 343


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 IWEAINEY 9
I+EAI EY
Sbjct: 336 IYEAIKEY 343


>sp|MRE11_METAC|DNA double-strand break repair protein|Methanosarcina acetivorans

Query: 2 IWEAINEYL 10
I+ AINE+L
Sbjct: 263 IFSAINEHL 271


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 WEAINEYL 10
WE + EYL
Sbjct: 277 WEFLGEYL 284


>sp|RFRNP_IGNH4|RNA-FREE ribonuclease P|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 IWEAINEYL 10
+WE + +YL
Sbjct: 25 LWEVVEKYL 33


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 IWEAINEYL 10
I EAI EYL
Sbjct: 129 IGEAIKEYL 137


>sp|CDC6Q_HALMA|ORC1-TYPE DNA replication protein 17|Haloarcula marismortui (strain ATCC

Query: 2 IWEAINEY 9
+W +NE+
Sbjct: 147 VWSVLNEF 154


>sp|ASSY_METHJ|ARGININOSUCCINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 IWEAINEYL 10
+W+A+N ++
Sbjct: 318 LWDALNAFI 326


>sp|Y1714_PYRHO|UNCHARACTERIZED lipoprotein PH1714|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IWEAINE 8
+WE +NE
Sbjct: 356 VWEIVNE 362




135|SequenceR|680|671|AWWHAVIWEA

>sp|SODF_SACS2|SUPEROXIDE dismutase [Fe]|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 AWWHAVIWEA 10
AWW+ V W+A
Sbjct: 191 AWWNVVNWDA 200


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AWWHAVIW 8
A++H VIW
Sbjct: 263 AYYHPVIW 270


>sp|SODF_SULAC|SUPEROXIDE dismutase [Fe]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AWWHAVIWE 9
AWW+ V W+
Sbjct: 191 AWWNVVNWD 199


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 3 WHAVIW 8
WH +W
Sbjct: 3 WHQAVW 8


>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 WHAVIWEA 10
+HA+IW A
Sbjct: 301 FHAIIWPA 308


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 WHAVIWEA 10
+H++IW A
Sbjct: 301 FHSIIWPA 308


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 WHAVIWEA 10
+H +IW A
Sbjct: 300 FHTIIWPA 307


>sp|SYY_SULAC|TYROSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AWWHAVI 7
A WHA+I
Sbjct: 71 ATWHAMI 77


>sp|SODF_ACIAM|SUPEROXIDE dismutase [Fe]|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 WWHAVIWE 9
WW+ V W+
Sbjct: 192 WWNLVNWD 199


>sp|SYP_METHJ|PROLINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 AWWHAVIWEA 10
W++ ++W A
Sbjct: 16 GWYNDILWRA 25


>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 WWHAVIWEA 10
W++ ++W A
Sbjct: 17 WYNEILWRA 25


>sp|TRUA_METBU|TRNA pseudouridine synthase A|Methanococcoides burtonii (strain DSM

Query: 1 AWWHAVIWE 9
AW HA++ E
Sbjct: 90 AWAHAIVPE 98




136|SequenceR|685|676|GMLLVAWWHA

>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 LLVAWWH 9
L+ +WWH
Sbjct: 442 LVASWWH 448


>sp|SYY_SULTO|TYROSINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LLVAWWHA 10
+LVA WHA
Sbjct: 73 ILVATWHA 80


>sp|SYY_SULAC|TYROSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 LLVAWWHA 10
+LVA WHA
Sbjct: 68 ILVATWHA 75


>sp|KDPB_THEVO|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma volcanium (strain ATCC

Query: 2 MLLVAW 7
MLL+AW
Sbjct: 659 MLLIAW 664


>sp|SYY2_PYRAE|TYROSINE--TRNA ligase 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 MLLVAWWHA 10
++LVA WHA
Sbjct: 57 IVLVATWHA 65


>sp|PGP_PYRIL|PHOSPHOGLYCOLATE phosphatase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GMLLVAW 7
GML +AW
Sbjct: 180 GMLSIAW 186


>sp|TCPA_THEAD|NAD(+) hydrolase TcpA|Theionarchaea archaeon (strain DG-70-1)

Query: 1 GMLLVAWWHA 10
G +V W+H+
Sbjct: 73 GEKIVGWYHS 82


>sp|PGP_PYRAE|PHOSPHOGLYCOLATE phosphatase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GMLLVAWWHA 10
GML V+W A
Sbjct: 180 GMLSVSWGFA 189




137|SequenceR|690|681|MILAIGMLLV

***** No hits found ******


138|SequenceR|695|686|FGAMLMILAI

>sp|Y788_ARCFU|UNCHARACTERIZED transporter AF_0788|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FGAMLMILAI 10
FGA L++LA+
Sbjct: 292 FGAFLILLAV 301




139|SequenceR|700|691|SCIKIFGAML

>sp|ACDD_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit delta|Archaeoglobus fulgidus

Query: 2 CIKIFGAML 10
C+K FGA L
Sbjct: 201 CVKKFGADL 209


>sp|RNP1_METBU|RIBONUCLEASE P protein component 1|Methanococcoides burtonii (strain DSM 6242

Query: 3 IKIFGAML 10
+KIFG +L
Sbjct: 77 VKIFGTLL 84


>sp|ACDD_METJA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanocaldococcus

Query: 2 CIKIFGA 8
C+K FGA
Sbjct: 160 CVKEFGA 166




140|SequenceR|705|696|SPTHVSCIKI

>sp|RL37_SULTO|LARGE ribosomal subunit protein eL37|Sulfurisphaera tokodaii (strain

Query: 1 SPTHVSC 7
SPTHV C
Sbjct: 13 SPTHVRC 19


>sp|RL37_SULAC|LARGE ribosomal subunit protein eL37|Sulfolobus acidocaldarius (strain

Query: 1 SPTHVSC 7
+PTHV C
Sbjct: 13 TPTHVRC 19


>sp|RL37_THEKO|LARGE ribosomal subunit protein eL37|Thermococcus kodakarensis (strain

Query: 1 SPTHVSC 7
+PTH+ C
Sbjct: 14 TPTHIRC 20


>sp|RL37_THEGJ|LARGE ribosomal subunit protein eL37|Thermococcus gammatolerans (strain

Query: 1 SPTHVSC 7
+PTH+ C
Sbjct: 14 TPTHIRC 20


>sp|DPCKG_ARCFU|GTP-DEPENDENT dephospho-CoA kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PTHVSC 7
P H+SC
Sbjct: 92 PAHISC 97


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 SPTHVSCI 8
SP H CI
Sbjct: 528 SPLHTCCI 535


>sp|RL37_PYRFU|LARGE ribosomal subunit protein eL37|Pyrococcus furiosus (strain ATCC

Query: 1 SPTHVSC 7
+PTH+ C
Sbjct: 14 TPTHIRC 20


>sp|RL37_THEON|LARGE ribosomal subunit protein eL37|Thermococcus onnurineus (strain

Query: 1 SPTHVSCIK 9
+PTH+ C +
Sbjct: 14 TPTHIKCRR 22


>sp|RL37_PYRHO|LARGE ribosomal subunit protein eL37|Pyrococcus horikoshii (strain ATCC

Query: 1 SPTHVSC 7
+PTH+ C
Sbjct: 14 TPTHIRC 20


>sp|RL37_PYRAB|LARGE ribosomal subunit protein eL37|Pyrococcus abyssi (strain GE5 /

Query: 1 SPTHVSC 7
+PTH+ C
Sbjct: 14 TPTHIRC 20




141|SequenceR|710|701|LKPNSSPTHV

>sp|RL37_PYRFU|LARGE ribosomal subunit protein eL37|Pyrococcus furiosus (strain ATCC

Query: 2 KPNSSPTHV 10
K NS+PTH+
Sbjct: 10 KRNSTPTHI 18


>sp|RL37_SULTO|LARGE ribosomal subunit protein eL37|Sulfurisphaera tokodaii (strain

Query: 2 KPNSSPTHV 10
K N SPTHV
Sbjct: 9 KMNKSPTHV 17


>sp|LIPA_PYRAE|LIPOYL synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LKPNSSPTHV 10
+KP+ SP H+
Sbjct: 228 IKPSGSPRHL 237


>sp|RL18_ARCFU|LARGE ribosomal subunit protein uL18|Archaeoglobus fulgidus (strain ATCC

Query: 1 LKPNSSPTHV 10
LKP+ P HV
Sbjct: 169 LKPSDLPAHV 178


>sp|SYTC_SULTO|THREONINE--TRNA ligase catalytic subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LKPNSSPTHV 10
LKP + P H+
Sbjct: 221 LKPMNCPAHI 230


>sp|PYRDB_SULAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Sulfolobus acidocaldarius

Query: 1 LKPNSSPTHV 10
L+P+ SPT V
Sbjct: 49 LEPHRSPTFV 58


>sp|Y130_ARCFU|PROBABLE deacetylase AF_0130|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LKPNSSPTH 9
LK SPTH
Sbjct: 12 LKHEQSPTH 20


>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LKPNSSPTHV 10
+KP + P H+
Sbjct: 230 IKPMNCPAHI 239


>sp|SYTC_METS5|THREONINE--TRNA ligase catalytic subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 LKPNSSPTHV 10
+KP + P H+
Sbjct: 222 IKPMNCPAHI 231


>sp|PURL_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus kodakarensis (strain ATCC

Query: 2 KPNSSPTHV 10
+PN +PT V
Sbjct: 284 EPNMTPTEV 292


>sp|ILVD_METHJ|DIHYDROXY-ACID dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LKPNSSPTH 9
++P SP H
Sbjct: 357 IRPEQSPVH 365




142|SequenceR|715|706|PKPPPLKPNS

>sp|LYSZ_PYRIL|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum islandicum

Query: 2 KPPPLK 7
KPPPLK
Sbjct: 142 KPPPLK 147


>sp|LYSZ_PYRNV|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 2 KPPPLK 7
+PPPLK
Sbjct: 142 RPPPLK 147


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 2 KPPPLKPNS 10
KP PLKPN+
Sbjct: 220 KPVPLKPNA 228


>sp|LYSZ_PYRCJ|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 3 PPPLK 7
PPPLK
Sbjct: 143 PPPLK 147


>sp|LYSZ_PYRAR|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum arsenaticum

Query: 3 PPPLK 7
PPPLK
Sbjct: 143 PPPLK 147


>sp|LYSZ_PYRAE|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum aerophilum

Query: 3 PPPLK 7
PPPLK
Sbjct: 143 PPPLK 147


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 KPPPLKPN 9
KP PLKPN
Sbjct: 209 KPLPLKPN 216


>sp|DOXD_ACIAM|THIOSULFATE dehydrogenase [quinone] large subunit|Acidianus ambivalens

Query: 2 KPPPLKPNS 10
KP L PNS
Sbjct: 43 KPAKLDPNS 51


>sp|YAC2_METSH|UNCHARACTERIZED protein in acs 3'region|Methanothrix soehngenii (Methanosaeta

Query: 2 KPPPLKPN 9
KP PLKPN
Sbjct: 98 KPLPLKPN 105


>sp|CCA_METAC|CCA-ADDING enzyme|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PPPLKP 8
PPPL P
Sbjct: 272 PPPLSP 277


>sp|RIBL_HALUD|FAD synthase|Halorhabdus utahensis (strain DSM 12940

Query: 2 KPPPLKPN 9
K PP+ PN
Sbjct: 44 KDPPILPN 51


>sp|RL10_ARCFU|LARGE ribosomal subunit protein uL10|Archaeoglobus fulgidus (strain ATCC

Query: 3 PPPLKPN 9
P PLKPN
Sbjct: 107 PSPLKPN 113




143|SequenceR|720|711|LTGPLPKPPP

>sp|AGLE_HALVD|GLYCOSYLTRANSFERASE AglE|Haloferax volcanii (strain ATCC 29605

Query: 1 LTGPLPKPP 9
L G LPKPP
Sbjct: 249 LVGFLPKPP 257


>sp|NURA_PYRFU|DNA double-strand break repair nuclease|Pyrococcus furiosus (strain

Query: 1 LTGPLPKPP 9
LTG L +PP
Sbjct: 129 LTGSLVRPP 137


>sp|GATE_CALMQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Caldivirga maquilingensis (strain ATCC

Query: 2 TGPLPKPP 9
TGP+ PP
Sbjct: 190 TGPMEYPP 197


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 3 GPLPKP 8
GP PKP
Sbjct: 23 GPFPKP 28


>sp|SYH_METPE|HISTIDINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LTGPLPK 7
+TGPLP+
Sbjct: 221 VTGPLPE 227


>sp|TOP6B_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 1 LTGPLPKPP 9
LT +PKPP
Sbjct: 218 LTNKIPKPP 226


>sp|TOP6B_SACI7|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LTGPLPKPP 9
LT +PKPP
Sbjct: 218 LTNKIPKPP 226


>sp|TOP6B_SACI6|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LTGPLPKPP 9
LT +PKPP
Sbjct: 218 LTNKIPKPP 226


>sp|TOP6B_SACI4|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LTGPLPKPP 9
LT +PKPP
Sbjct: 218 LTNKIPKPP 226


>sp|TOP6B_SACI3|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.27)

Query: 1 LTGPLPKPP 9
LT +PKPP
Sbjct: 218 LTNKIPKPP 226


>sp|TOP6B_SACI2|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LTGPLPKPP 9
LT +PKPP
Sbjct: 218 LTNKIPKPP 226


>sp|TOP6B_SACI1|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LTGPLPKPP 9
LT +PKPP
Sbjct: 218 LTNKIPKPP 226


>sp|TOP6B_SACS2|TYPE 2 DNA topoisomerase 6|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LTGPLPKPP 9
LT +PKPP
Sbjct: 218 LTNKIPKPP 226


>sp|RS10_METMP|SMALL ribosomal subunit protein uS10|Methanococcus maripaludis (strain

Query: 1 LTGPLPKP 8
++GP+P P
Sbjct: 34 MSGPIPLP 41


>sp|THYX_PYRAE|FLAVIN-DEPENDENT thymidylate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GPLPKPP 9
GPLP+ P
Sbjct: 230 GPLPETP 236


>sp|RS10_PYRHO|SMALL ribosomal subunit protein uS10|Pyrococcus horikoshii (strain ATCC

Query: 1 LTGPLPKP 8
++GP+P P
Sbjct: 34 MSGPIPLP 41


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 GPLPKP 8
GPLP P
Sbjct: 520 GPLPAP 525


>sp|RS10_PYRWO|SMALL ribosomal subunit protein uS10|Pyrococcus woesei

Query: 1 LTGPLPKP 8
++GP+P P
Sbjct: 34 MSGPIPLP 41


>sp|RS10_PYRFU|SMALL ribosomal subunit protein uS10|Pyrococcus furiosus (strain ATCC

Query: 1 LTGPLPKP 8
++GP+P P
Sbjct: 34 MSGPIPLP 41


>sp|RS10_PYRAB|SMALL ribosomal subunit protein uS10|Pyrococcus abyssi (strain GE5 /

Query: 1 LTGPLPKP 8
++GP+P P
Sbjct: 34 MSGPIPLP 41


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus

Query: 3 GPLPKP 8
GP PKP
Sbjct: 36 GPTPKP 41


>sp|RS10_THEKO|SMALL ribosomal subunit protein uS10|Thermococcus kodakarensis (strain

Query: 1 LTGPLPKP 8
++GP+P P
Sbjct: 34 MSGPIPLP 41


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 4 PLPKP 8
PLPKP
Sbjct: 91 PLPKP 95


>sp|RS10_THEON|SMALL ribosomal subunit protein uS10|Thermococcus onnurineus (strain

Query: 1 LTGPLPKP 8
++GP+P P
Sbjct: 34 MSGPIPLP 41


>sp|RS10_THEGJ|SMALL ribosomal subunit protein uS10|Thermococcus gammatolerans (strain

Query: 1 LTGPLPKP 8
++GP+P P
Sbjct: 34 MSGPIPLP 41


>sp|RS10_METJA|SMALL ribosomal subunit protein uS10|Methanocaldococcus jannaschii

Query: 1 LTGPLPKP 8
++GP+P P
Sbjct: 34 ISGPIPLP 41


>sp|EF1A_HALSA|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 700922

Query: 4 PLPKPP 9
P+P+PP
Sbjct: 214 PVPQPP 219


>sp|EF1A_HALS3|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 29341

Query: 4 PLPKPP 9
P+P+PP
Sbjct: 214 PVPQPP 219




144|SequenceR|725|716|PRRRKLTGPL

>sp|NNRE_NITMS|NAD(P)H-HYDRATE epimerase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PRRRKLTGPL 10
P+R+ LTG L
Sbjct: 190 PKRKDLTGEL 199


>sp|GATD_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Sulfolobus acidocaldarius (strain ATCC

Query: 4 RKLTGPL 10
RK+TGP+
Sbjct: 191 RKMTGPI 197


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 3 RRKLTGP 9
RR+LTGP
Sbjct: 198 RRELTGP 204


>sp|NNRE_CENSY|NAD(P)H-HYDRATE epimerase|Cenarchaeum symbiosum (strain A)

Query: 1 PRRRKLTG 8
P+R+ LTG
Sbjct: 188 PKRKDLTG 195


>sp|RL24_CALMQ|LARGE ribosomal subunit protein uL24|Caldivirga maquilingensis (strain

Query: 2 RRRKLTGPL 10
RRR LT PL
Sbjct: 25 RRRLLTAPL 33


>sp|TRPD_METB6|ANTHRANILATE phosphoribosyltransferase|Methanoregula boonei (strain DSM 21154

Query: 4 RKLTGPL 10
+KLTGP+
Sbjct: 199 QKLTGPM 205


>sp|RL2_THEVO|LARGE ribosomal subunit protein uL2|Thermoplasma volcanium (strain ATCC

Query: 1 PRRRKLTG 8
P+RRK+ G
Sbjct: 225 PKRRKVNG 232




145|SequenceR|730|721|QIPQPPRRRK

>sp|NNR_THEPD|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Thermofilum pendens (strain DSM

Query: 2 IPQPPRR 8
+P PPRR
Sbjct: 230 VPLPPRR 236


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 IPQPPRR 8
+P PPRR
Sbjct: 35 LPSPPRR 41


>sp|TOP6B_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IPQPPRRRK 10
IPQPP+ K
Sbjct: 218 IPQPPKSIK 226


>sp|EF1A_THEON|ELONGATION factor 1-alpha|Thermococcus onnurineus (strain NA1)

Query: 1 QIPQPPR 7
QIP+PP+
Sbjct: 209 QIPEPPK 215


>sp|EF1A_THEKO|ELONGATION factor 1-alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QIPQPPR 7
QIP+PP+
Sbjct: 209 QIPEPPK 215


>sp|EF1A_THEGJ|ELONGATION factor 1-alpha|Thermococcus gammatolerans (strain DSM 15229

Query: 1 QIPQPPR 7
QIP+PP+
Sbjct: 209 QIPEPPK 215


>sp|GATE_DESA1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Desulfurococcus amylolyticus (strain DSM

Query: 2 IPQPPRRR 9
IP+PP ++
Sbjct: 457 IPEPPEKK 464


>sp|PRIL_PYRFU|DNA primase large subunit PriL|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PQPPRR 8
P PPRR
Sbjct: 263 PNPPRR 268


>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 QIPQPPRRRK 10
++P+PPR K
Sbjct: 247 KLPKPPRESK 256




146|SequenceR|735|726|QRQPQQIPQP

>sp|GLPK_SACI6|GLYCEROL kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 PQQIPQP 10
PQ PQP
Sbjct: 39 PQHYPQP 45


>sp|GLPK_SACI4|GLYCEROL kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 PQQIPQP 10
PQ PQP
Sbjct: 39 PQHYPQP 45


>sp|GLPK_SACI3|GLYCEROL kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 PQQIPQP 10
PQ PQP
Sbjct: 39 PQHYPQP 45


>sp|GLPK_SACI7|GLYCEROL kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 PQQIPQP 10
PQ PQP
Sbjct: 39 PQHYPQP 45


>sp|GLPK_SACI2|GLYCEROL kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 PQQIPQP 10
PQ PQP
Sbjct: 39 PQHYPQP 45


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 2 RQPQQIPQP 10
RQP +P P
Sbjct: 256 RQPDSLPPP 264


>sp|DNAG_THEKO|DNA primase DnaG|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QRQPQQIPQP 10
+RQP+Q+ +P
Sbjct: 320 ERQPRQVTKP 329




147|SequenceR|740|731|SERPRQRQPQ

>sp|PURL_METS5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Metallosphaera sedula (strain ATCC 51363

Query: 3 RPRQRQPQ 10
+PR+R+P+
Sbjct: 363 KPRKREPE 370


>sp|Y38K_THETE|UNCHARACTERIZED 38 kDa protein in|Thermoproteus tenax

Query: 2 ERPRQRQPQ 10
ERP R PQ
Sbjct: 364 ERPLPRDPQ 372


>sp|HERA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 1 SERPRQRQP 9
S+RP+Q P
Sbjct: 410 SQRPKQLHP 418


>sp|IF2P_IGNH4|PROBABLE translation initiation factor IF-2|Ignicoccus hospitalis (strain

Query: 2 ERPRQRQP 9
+RPR RQP
Sbjct: 8 QRPRLRQP 15




148|SequenceR|748|736|RRMHGMQYSERPR

>sp|FEN_METHJ|FLAP endonuclease 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RRMHGMQYSERP 12
RR+HG Q + +P
Sbjct: 195 RRLHGRQITVQP 206


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RRMHGMQYSERP 12
R +H QY ERP
Sbjct: 77 RVVHNPQYPERP 88


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RRMHGMQYSERP 12
R +H QY ERP
Sbjct: 77 RVVHNPQYPERP 88


>sp|Y730_METJA|UNCHARACTERIZED protein MJ0730|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RRMHGMQYSERP 12
RRM G++ ++P
Sbjct: 158 RRMEGIEVLDKP 169


>sp|PDXS_NATPD|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Natronomonas pharaonis (strain

Query: 1 RRMHGMQYSER 11
R++ GM Y ER
Sbjct: 179 RKLSGMDYEER 189


>sp|PDXS_HALSA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Halobacterium salinarum (strain

Query: 1 RRMHGMQYSER 11
R++ GM Y ER
Sbjct: 180 RKLEGMDYEER 190


>sp|PDXS_HALS3|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Halobacterium salinarum (strain

Query: 1 RRMHGMQYSER 11
R++ GM Y ER
Sbjct: 180 RKLEGMDYEER 190


>sp|AMTAB_METJA|PROBABLE threonylcarbamoyladenosine tRNA

Query: 3 MHGMQYSER 11
+HG +YS+R
Sbjct: 329 IHGAKYSQR 337


>sp|Y382_METBU|UPF0758 protein Mbur_0382|Methanococcoides burtonii (strain DSM 6242

Query: 2 RMHGMQYSERPR 13
R+H M +RPR
Sbjct: 7 RIHDMPSEDRPR 18


>sp|Y2791_METMA|UPF0758 protein MM_2791|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RMHGMQYSERPR 13
R+H + ERPR
Sbjct: 7 RIHDLPEEERPR 18


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RRMHGMQYSER 11
+RMHG+ +R
Sbjct: 71 KRMHGLHVIDR 81


>sp|NARO_HALVD|TRANSCRIPTIONAL regulator NarO|Haloferax volcanii (strain ATCC 29605

Query: 4 HGMQYSERPR 13
H M Y E PR
Sbjct: 166 HEMGYFEHPR 175


>sp|G1PDH_HALLT|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 RRMHGMQYSE 10
RR+ ++YSE
Sbjct: 183 RRLRNVEYSE 192


>sp|FRHA_METBF|COENZYME F420 hydrogenase subunit alpha|Methanosarcina barkeri (strain

Query: 2 RMHGMQYSERPR 13
R+ GM Y+ PR
Sbjct: 167 RIGGMYYNVSPR 178


>sp|PYRB_CALMQ|ASPARTATE carbamoyltransferase catalytic subunit|Caldivirga maquilingensis

Query: 2 RMHGMQYS 9
RM GM YS
Sbjct: 201 RMRGMNYS 208




THE END